AT3G05040

HASTY 1-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
1401171 .. 1408302
7132 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05040.1

Sequence Viewer

Length: 3609 bp
ATGGAAGATAGCAACTCCACGGCAAGTAATGTGGCTCGAGCGATTCTCGCCGTCGTCGATTTCAGCTCCACGTCCGACACTCGCAAATCGGCGGTCCAATTCCTGGATTCTGTAAAATCTGGAGATGTCAGGGTTTTGGCAAAGACTTCTTTTCATCTTGTGAAAAAAGAGTGGTCTTCAGAAATTCGTCTCCATGCTTTTAAGATGCTACAGCATTTGGTTAGACTACGATGGGACGAATTAAGTCCTCCGGAGTGCAGGGGTCTTGTTAATCTTTCTATCGAACTAATGTCAGAGGTTGCTAATGCAAGCGAGAATTGGCCTCTTAAGAGTCAGTCTGCTGCCCTTGTAGCTGAGATTGTTAGAAGAGAAGGCCCTGATCGTTGGCAAGAGATATTTACTTTATTAACTTCATTGTCTGCTCAGGGCCCCTTACAAGCTGAATTGGTATTGATGACTCTTAGATGGCTTCCTGAAGATATTACAATTTACAATGACGACTTGGAAGGTGACAGGCGTAGGCTATTGTTGCGGGGACTTACTCAATCGTTGCCTGAGATTTTGCCTTTATTGTATAATCTTCTTGAGAGACACTTTGGAGCTGCAATGAGTGAAGCTGGTATGCAGCACTTTGACTTGGCAAAACAGCATGCAGATGTAGTTATAGCTTGCTTGAATGCCATCGTTGCATACACTGAGTGGGCTCCTGTTCCAGATCTTGCCAGATATGGAATTCTTAGTGGGTGCAGCTTCTTACTTTCTTCTTCTGACTTCCGTCTTCATGCTTGTGAGGTTTTCAAACTCGTCTGCTCAAGAAAAAGACCCAGTGATGCTTCTACTGCAGAGTTCGATTCTGCAATTAGCAATTTGTTTCAGATTCTGACGAATGCCTCCAGAGAATTCTTATGTAGATCCTCCTCAAGTTCTAGCGTTATAGATGACAATGATTATGATTTTGCTGTATGCATGTGTGAGAGTATGGCCTCTTTAGGCTCAACTAACTTGCAAAGCATCTCTTCTGATGGTGGTGTTATGGCTGTTTATCTTCAGCAGATGCTTGGCTTTTTCCAACACTTCAAGTTGGGCCTTCACTTCGAGGCACTTCTCTTTTGGCTGTCACTGATGCGGGATTTACTTCCAAAACCCAAGGCTGCGACTTATCCAAGTGGTGGGGGATCATCAACTGGCGGTGATGATAGTTCAAGCCAGGTTGATAGTGAAAAGAAAAAGACTTTAAGTCTTATTAATGATGACATCTCGAGCGCTATACTGGACGTATCTTTCCAGCGGATGCTCAAGAAAGAAAAAGTTCCTACTGGAATTGCTCTTTCGCTTGGGCCCCTAGAACTCTGGAGTGATGAATTTGAAGGGAAGGGAGACTTTGGCCCGTACCGATCAAAGCTTCTAGAATTGATCAAGCTTACTGCTTCTCACAAGCCTCTCATCTCCAGTACCAAAATATCTGAAAGGGTGATTACACTCATTAAGCACCTATTGGCTTCTCCAGCTCCTCTTCAGCATGTAGCAGTGATGGACAGCCAGCAATTAGCACTTGACTGTATTGTGGCAACGCTTTTTGATGGATCAAATGAGTTTGCTGGTGGAAGTTCTGAAGTTCATTATGCATTACGTGGAATATTTGAGGGATTGCTTCAGCAGCTTCTCTCTTTGAAATGGAATGAACCAGAACTTATGAAAGTGCATGTCCACTATCTGGATGCAATGGGTCCCTTTCTCAAGTATTTTCCAGATGCAGTTGGAAGTCTCATCAATAAATTATTTGAGCTTCTCACCTCTCTTCCACACGTTGTGAAGGATCCAGCTACTAGTACATCTAGAGCTGCAAGATTGCAGATTTGCACATCTTTCATAAGAATAGCCAAAGCTGCAGAAAAAAGTGTTCTGCCTCACATGAAGGGTATTGCTGATACAATGGGGTACTTGGCAAAAGAAGGAACTTTACTCCGTGGGGAGCATAACATTCTGGGTGAAGCATTTCTTGTTATGGCTTCCTCAGCAGGAGCTCAACAGCAGCAAGAAGTTCTGGCTTGGTTATTGGAACCATTGAGTCAACAGTGGATCCAACCAGAGTGGCAGAACAATTATCTATCAGACCCGATGGGTCTTGTTCGTTTATGCTCCAACACATCCTTCATGTGGTCCATATACCACACTGTTACATTCTTTGAGAAAGCACTCAAGCGAAGTGGATACAGAAAAAGCAATTTGAACACGACCTCTGCGACAACTCCAGCTTCACATCCTATGGCTCATCATCTTTCTTGGATGTTGCCACCCCTCTTAAAACTACTCCGTGTTCTTCATTCCCTTTGGTCTCCCTCTGTATTTCAAACATTACCCCCAGAAATGAGGGCGGCAATGACAATGACTGATGCTGAGCGATACAGTCTCCTTGGTGAAGCAAATCCTAAATTGTCAAAAGGCGTATCGGTTTATGCTGATGGGTCATTCGAAGGAACTAAGGAAGGACAAGCCGAGGCAAGTGAATCTGATATACGAAATTGGTTGAAAGGTATCCGAGATTGTGGATACAACGTGTTGGGCCTATCAACAACCATCGGAGAGACATTCTTTAAATGCTTAGATGCTAACTATGTTGCAATGGCACTCATGGAAAATTTGCAGTCGATGGAATTCAGGCACATTCGGCTGTTTATTCATACCTTTATAACTTATATAGTCAAATCTTGTCCGGCGGATATGTGGGAGTCATGGCTGGGAGTGCTTCTGCACCCATTGTTTATACACTGTCAGCAAGCTCTCAGCTCCGCCTGGCCAGGTCTTCTACAAGAGGGCAGAGCAAAGGTTCCGGACTTGTTTGGCATACAAAGTGGATCAGACATGAAACTTGAAGTGATGGAGGAAAAACTGTTAAGAGATCTAACTCGGGAGATTGCGACTCTCTTTTCAACAATGGCTTCTCCTGGACTAAACACAGGAGTTCCAGTTTTGGAACATTCAGGACATGTTGGTCGTGTGGACATGTCCACTCTCACGGATTTGCATGCGTTCAGATCCAACTCTATGGTGGGTTTCCTCTTGAATCACAAAAGCGTAGCTCTACCAGCACTGCAGATCTGTTTAGAAACTTTTACCTGGACAGATGGAGAAGCGACCACCAAAGTCTGTTACTTTTGTGGTGTTGTTGTTCTTCTAGCTAAACTAACAAATAACGTGGAGCTCCGAGAATTTGTTTCAAAAGATATGTTCTCGGCAGTCATTCGTGGCTTGGGCATGGAGTCCAATGCCATTAACAGCCCTGATTTAGTTAATATATGCCGTGAAATATTTATCTATCTCTCTGACAGAGACCCAGCTCCTCGCCAGGTTTTGCTTTCGCTCCCGTGTCTCACTCCCAACGACTTGCATGCTTTTGAAGAAGCTACAGCCAAAACTAGCAGCCCCAAAGAACAAAAGCAGCTTATGAGGAGCTTGTTGTTGCTAGGTACTGGGAACAACTTAAAAGCACTTGCTGCTCAAAAAAGTCAGAATGTTATCACCAATGTCACAGCAAGAACGCGGCTACCCGCAAGCGCTCCAGAAACAATTGGAGCGGGTGTTTTGTGGGATGAAGAGTTCGTACAATGA

Protein Analysis

1202

Amino Acids

133.13

Weight (kDa)

5.93

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xpo1 PF08389 107 - 265 1.6e-27 Exportin 1-like protein
Exportin-5 PF19273 315 - 1168 8.7e-293 Exportin-5 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2690
AasI GACNNNNNNGTC 1 cut(s) 2991
AccB7I CCANNNNNTGG 3 cut(s) 103, 1169, 1714
AccBSI CCGCTC 1 cut(s) 3575
AccII CGCG 1 cut(s) 3541
AccIII TCCGGA 2 cut(s) 250, 2830
AclWI GGATC 9 cut(s) 906, 1183, 1591, 1811, 1824, 2074, 2087, 2863, 3030
AcoI YGGCCR 1 cut(s) 2795
AcsI RAATTY 7 cut(s) 183, 732, 899, 1361, 2638, 2654, 3209
AcuI CTGAAG 6 cut(s) 162, 495, 1031, 1499, 1632, 1637
AdeI CACNNNGTG 2 cut(s) 699, 1810
AfaI GTAC 6 cut(s) 1391, 1453, 1831, 1940, 3469, 3603
AfeI AGCGCT 2 cut(s) 1264, 3556
AfiI CCNNNNNNNGG 4 cut(s) 103, 1169, 1714, 2157
AflII CTTAAG 1 cut(s) 326
AflIII ACRYGT 4 cut(s) 1804, 2556, 2986, 3003
AhdI GACNNNNNGTC 1 cut(s) 1236
AhlI ACTAGT 1 cut(s) 1826
AjiI CACGTC 1 cut(s) 72
AjnI CCWGG 7 cut(s) 102, 1206, 2792, 2797, 2944, 3116, 3345
AjuI GAANNNNNNNTTGG 2 cut(s) 2135, 2167
AloI GAACNNNNNNTCC 1 cut(s) 3581
Alw21I GWGCWC 2 cut(s) 2026, 3204
Alw26I GTCTC 9 cut(s) 194, 583, 1371, 1769, 2340, 2414, 2579, 3324, 3374
AlwI GGATC 9 cut(s) 906, 1183, 1591, 1811, 1824, 2074, 2087, 2863, 3030
AlwNI CAGNNNCTG 1 cut(s) 880
Ama87I CYCGRG 3 cut(s) 36, 1258, 2907
Aor13HI TCCGGA 2 cut(s) 250, 2830
Aor51HI AGCGCT 2 cut(s) 1264, 3556
AoxI GGCC 9 cut(s) 320, 373, 427, 981, 1084, 1337, 1384, 2563, 2795
ApaI GGGCCC 2 cut(s) 431, 1341
ApoI RAATTY 7 cut(s) 183, 732, 899, 1361, 2638, 2654, 3209
ArsI GACNNNNNNTTYG 2 cut(s) 78, 110
AseI ATTAAT 1 cut(s) 1245
Asp700I GAANNNNTTC 2 cut(s) 1308, 1995
AspLEI GCGC 2 cut(s) 1265, 3557
AsuHPI GGTGA 7 cut(s) 521, 1202, 1483, 1783, 2000, 2429, 3511
AsuII TTCGAA 1 cut(s) 2472
AvaI CYCGRG 3 cut(s) 36, 1258, 2907
AvaII GGWCC 3 cut(s) 94, 1727, 2160
BaeGI GKGCMC 2 cut(s) 431, 1341
BalI TGGCCA 1 cut(s) 2797
BamHI GGATCC 2 cut(s) 1816, 2079
BanII GRGCYC 5 cut(s) 431, 706, 1341, 2026, 3204
BarI GAAGNNNNNNTAC 3 cut(s) 1944, 1976, 3585
BbsI GAAGAC 3 cut(s) 168, 770, 2795
Bbv12I GWGCWC 2 cut(s) 2026, 3204
BbvCI CCTCAGC 1 cut(s) 2014
BceAI ACGGC 3 cut(s) 35, 36, 3285
BcgI CGANNNNNNTGC 2 cut(s) 3371, 3405
BciT130I CCWGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
BciVI GTATCC 3 cut(s) 2204, 2543, 2546
BclI TGATCA 1 cut(s) 1413
BcoDI GTCTC 9 cut(s) 194, 583, 1371, 1769, 2340, 2414, 2579, 3324, 3374
BcuI ACTAGT 1 cut(s) 1826
BfaI CTAG 8 cut(s) 927, 1343, 1406, 1827, 1836, 3176, 3417, 3464
BfmI CTRYAG 5 cut(s) 209, 840, 1887, 3092, 3405
BfoI RGCGCY 2 cut(s) 1266, 3558
BfrI CTTAAG 1 cut(s) 326
BfuI GTATCC 3 cut(s) 2204, 2543, 2546
BglII AGATCT 3 cut(s) 715, 2899, 3096
BlpI GCTNAGC 1 cut(s) 2397
Bme1390I CCNGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
Bme18I GGWCC 3 cut(s) 94, 1727, 2160
BmeRI GACNNNNNGTC 1 cut(s) 1236
BmeT110I CYCGRG 3 cut(s) 36, 1258, 2907
BmgBI CACGTC 1 cut(s) 72
BmrFI CCNGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
BmrI ACTGGG 2 cut(s) 819, 3480
BmuI ACTGGG 2 cut(s) 819, 3480
BoxI GACNNNNGTC 1 cut(s) 774
BpiI GAAGAC 3 cut(s) 168, 770, 2795
BplI GAGNNNNNCTC 2 cut(s) 30, 62
BpmI CTGGAG 7 cut(s) 141, 877, 1372, 1432, 1488, 2235, 3543
Bpu10I CCTNAGC 2 cut(s) 423, 2014
Bpu1102I GCTNAGC 1 cut(s) 2397
Bpu14I TTCGAA 1 cut(s) 2472
BpuEI CTTGAG 6 cut(s) 605, 796, 904, 1280, 1721, 2183
BsaAI YACGTR 1 cut(s) 1631
BsaI GGTCTC 2 cut(s) 2340, 3324
BsaJI CCNNGG 5 cut(s) 18, 1146, 1966, 2413, 2496
BsaWI WCCGGW 2 cut(s) 250, 2830
BsaXI ACNNNNNCTCC 4 cut(s) 2952, 2982, 3564, 3594
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 1169, 1714, 2157
Bse1I ACTGG 7 cut(s) 825, 1189, 1275, 1321, 1449, 2966, 3475
Bse3DI GCAATG 4 cut(s) 612, 1728, 2385, 2628
BseAI TCCGGA 2 cut(s) 250, 2830
BseBI CCWGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
BseDI CCNNGG 5 cut(s) 18, 1146, 1966, 2413, 2496
BseGI GGATG 6 cut(s) 1296, 1723, 2147, 2260, 2292, 3595
BseLI CCNNNNNNNGG 4 cut(s) 103, 1169, 1714, 2157
BseMI GCAATG 4 cut(s) 612, 1728, 2385, 2628
BseMII CTCAG 7 cut(s) 345, 437, 546, 687, 2028, 2388, 2797
BseNI ACTGG 7 cut(s) 825, 1189, 1275, 1321, 1449, 2966, 3475
BseRI GAGGAG 4 cut(s) 907, 1500, 3330, 3463
BseSI GKGCMC 2 cut(s) 431, 1341
BseYI CCCAGC 2 cut(s) 2737, 3334
BsgI GTGCAG 3 cut(s) 277, 766, 2735
Bsh1236I CGCG 1 cut(s) 3541
BshFI GGCC 9 cut(s) 322, 375, 429, 983, 1086, 1339, 1386, 2565, 2797
BsiHKAI GWGCWC 2 cut(s) 2026, 3204
BsiHKCI CYCGRG 3 cut(s) 36, 1258, 2907
BsiSI CCGG 3 cut(s) 251, 2714, 2831
BslFI GGGAC 3 cut(s) 248, 549, 1713
BslI CCNNNNNNNGG 4 cut(s) 103, 1169, 1714, 2157
BsmAI GTCTC 9 cut(s) 194, 583, 1371, 1769, 2340, 2414, 2579, 3324, 3374
BsmBI CGTCTC 1 cut(s) 194
BsmFI GGGAC 3 cut(s) 248, 549, 1713
BsmI GAATGC 2 cut(s) 682, 892
BsnI GGCC 9 cut(s) 322, 375, 429, 983, 1086, 1339, 1386, 2565, 2797
Bso31I GGTCTC 2 cut(s) 2340, 3324
BsoBI CYCGRG 3 cut(s) 36, 1258, 2907
Bsp119I TTCGAA 1 cut(s) 2472
Bsp120I GGGCCC 2 cut(s) 427, 1337
Bsp1286I GDGCHC 5 cut(s) 431, 706, 1341, 2026, 3204
Bsp13I TCCGGA 2 cut(s) 250, 2830
Bsp1720I GCTNAGC 1 cut(s) 2397
BspANI GGCC 9 cut(s) 322, 375, 429, 983, 1086, 1339, 1386, 2565, 2797
BspCNI CTCAG 7 cut(s) 346, 436, 547, 688, 2027, 2389, 2796
BspEI TCCGGA 2 cut(s) 250, 2830
BspFNI CGCG 1 cut(s) 3541
BspMAI CTGCAG 3 cut(s) 844, 1891, 3096
BspPI GGATC 9 cut(s) 906, 1183, 1591, 1811, 1824, 2074, 2087, 2863, 3030
BspT104I TTCGAA 1 cut(s) 2472
BspTI CTTAAG 1 cut(s) 326
BspTNI GGTCTC 2 cut(s) 2340, 3324
BsrBI CCGCTC 1 cut(s) 3575
BsrDI GCAATG 4 cut(s) 612, 1728, 2385, 2628
BsrI ACTGG 7 cut(s) 825, 1189, 1275, 1321, 1449, 2966, 3475
BssECI CCNNGG 5 cut(s) 18, 1146, 1966, 2413, 2496
BssT1I CCWWGG 2 cut(s) 1146, 2413
Bst2UI CCWGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
Bst4CI ACNGT 6 cut(s) 1559, 2076, 2176, 2408, 2771, 2892
Bst6I CTCTTC 5 cut(s) 361, 1021, 1518, 1803, 3588
BstAFI CTTAAG 1 cut(s) 326
BstAPI GCANNNNNTGC 1 cut(s) 3494
BstBAI YACGTR 1 cut(s) 1631
BstBI TTCGAA 1 cut(s) 2472
BstC8I GCNNGC 8 cut(s) 310, 651, 670, 1541, 2778, 3027, 3390, 3553
BstDSI CCRYGG 2 cut(s) 18, 1966
BstF5I GGATG 6 cut(s) 1296, 1723, 2147, 2260, 2292, 3595
BstFNI CGCG 1 cut(s) 3541
BstH2I RGCGCY 2 cut(s) 1266, 3558
BstHHI GCGC 2 cut(s) 1265, 3557
BstMAI GTCTC 9 cut(s) 194, 583, 1371, 1769, 2340, 2414, 2579, 3324, 3374
BstNI CCWGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
BstNSI RCATGY 8 cut(s) 653, 970, 1523, 1706, 2990, 3007, 3029, 3392
BstPAI GACNNNNGTC 1 cut(s) 774
BstSCI CCNGG 7 cut(s) 102, 1206, 2792, 2797, 2944, 3116, 3345
BstSFI CTRYAG 5 cut(s) 209, 840, 1887, 3092, 3405
BstSLI GKGCMC 2 cut(s) 431, 1341
BstUI CGCG 1 cut(s) 3541
BstV2I GAAGAC 3 cut(s) 168, 770, 2795
BstX2I RGATCY 7 cut(s) 715, 911, 1816, 2079, 2899, 3035, 3096
BstXI CCANNNNNNTGG 1 cut(s) 3046
BstYI RGATCY 7 cut(s) 715, 911, 1816, 2079, 2899, 3035, 3096
BsuI GTATCC 3 cut(s) 2204, 2543, 2546
BsuRI GGCC 9 cut(s) 322, 375, 429, 983, 1086, 1339, 1386, 2565, 2797
BtgI CCRYGG 2 cut(s) 18, 1966
BtrI CACGTC 1 cut(s) 72
BtsCI GGATG 6 cut(s) 1296, 1723, 2147, 2260, 2292, 3595
BtsI GCAGTG 2 cut(s) 1533, 3089
BtsIMutI CAGTG 8 cut(s) 693, 832, 1118, 1533, 2081, 2172, 2767, 3089
Cac8I GCNNGC 8 cut(s) 310, 651, 670, 1541, 2778, 3027, 3390, 3553
CaiI CAGNNNCTG 1 cut(s) 880
CfoI GCGC 2 cut(s) 1265, 3557
Csp6I GTAC 6 cut(s) 1390, 1452, 1830, 1939, 3468, 3602
CspCI CAANNNNNGTGG 8 cut(s) 12, 47, 2072, 2107, 2188, 2223, 3177, 3212
CviQI GTAC 6 cut(s) 1390, 1452, 1830, 1939, 3468, 3602
DraI TTTAAA 1 cut(s) 2596
DraIII CACNNNGTG 2 cut(s) 699, 1810
DrdI GACNNNNNNGTC 1 cut(s) 2991
DriI GACNNNNNGTC 1 cut(s) 1236
DseDI GACNNNNNNGTC 1 cut(s) 2991
EaeI YGGCCR 1 cut(s) 2795
Eam1104I CTCTTC 5 cut(s) 361, 1021, 1518, 1803, 3588
Eam1105I GACNNNNNGTC 1 cut(s) 1236
EarI CTCTTC 5 cut(s) 361, 1021, 1518, 1803, 3588
EciI GGCGGA 2 cut(s) 2732, 2779
Ecl136II GAGCTC 2 cut(s) 2024, 3202
Eco130I CCWWGG 2 cut(s) 1146, 2413
Eco24I GRGCYC 5 cut(s) 431, 706, 1341, 2026, 3204
Eco31I GGTCTC 2 cut(s) 2340, 3324
Eco47I GGWCC 3 cut(s) 94, 1727, 2160
Eco47III AGCGCT 2 cut(s) 1264, 3556
Eco53kI GAGCTC 2 cut(s) 2024, 3202
Eco57I CTGAAG 6 cut(s) 162, 495, 1031, 1499, 1632, 1637
Eco88I CYCGRG 3 cut(s) 36, 1258, 2907
EcoICRI GAGCTC 2 cut(s) 2024, 3202
EcoO109I RGGNCCY 5 cut(s) 374, 427, 428, 1338, 1727
EcoRI GAATTC 3 cut(s) 732, 899, 2654
EcoRII CCWGG 7 cut(s) 102, 1206, 2792, 2797, 2944, 3116, 3345
EcoT14I CCWWGG 2 cut(s) 1146, 2413
EcoT22I ATGCAT 2 cut(s) 968, 1627
EcoT38I GRGCYC 5 cut(s) 431, 706, 1341, 2026, 3204
ErhI CCWWGG 2 cut(s) 1146, 2413
Esp3I CGTCTC 1 cut(s) 194
FalI AAGNNNNNCTT 6 cut(s) 1000, 1032, 1364, 1396, 1983, 2015
FaqI GGGAC 3 cut(s) 248, 549, 1713
FauI CCCGC 4 cut(s) 525, 1119, 3556, 3568
FbaI TGATCA 1 cut(s) 1413
FokI GGATG 6 cut(s) 1303, 1730, 2134, 2247, 2299, 3602
FriOI GRGCYC 5 cut(s) 431, 706, 1341, 2026, 3204
FspBI CTAG 8 cut(s) 927, 1343, 1406, 1827, 1836, 3176, 3417, 3464
GlaI GCGC 2 cut(s) 1264, 3556
GsaI CCCAGC 2 cut(s) 2741, 3338
GsuI CTGGAG 7 cut(s) 141, 877, 1372, 1432, 1488, 2235, 3543
HaeII RGCGCY 2 cut(s) 1266, 3558
HaeIII GGCC 9 cut(s) 322, 375, 429, 983, 1086, 1339, 1386, 2565, 2797
HapII CCGG 3 cut(s) 251, 2714, 2831
HhaI GCGC 2 cut(s) 1265, 3557
Hin6I GCGC 2 cut(s) 1263, 3555
HinP1I GCGC 2 cut(s) 1263, 3555
HincII GTYRAC 1 cut(s) 2072
HindII GTYRAC 1 cut(s) 2072
HindIII AAGCTT 2 cut(s) 1400, 1418
HpaII CCGG 3 cut(s) 251, 2714, 2831
HphI GGTGA 7 cut(s) 521, 1202, 1483, 1783, 2000, 2429, 3511
Hpy166II GTNNAC 4 cut(s) 1708, 2072, 3001, 3009
Hpy8I GTNNAC 4 cut(s) 1708, 2072, 3001, 3009
Hpy99I CGWCG 2 cut(s) 56, 59
HpyCH4III ACNGT 6 cut(s) 1559, 2076, 2176, 2408, 2771, 2892
HpyCH4IV ACGT 6 cut(s) 71, 1275, 1630, 1806, 2556, 3195
HpySE526I ACGT 6 cut(s) 71, 1275, 1630, 1806, 2556, 3195
HspAI GCGC 2 cut(s) 1263, 3555
KflI GGGWCCC 1 cut(s) 1727
Kpn2I TCCGGA 2 cut(s) 250, 2830
Ksp22I TGATCA 1 cut(s) 1413
MaeI CTAG 8 cut(s) 927, 1343, 1406, 1827, 1836, 3176, 3417, 3464
MaeII ACGT 6 cut(s) 71, 1275, 1630, 1806, 2556, 3195
MaeIII GTNAC 5 cut(s) 509, 1116, 2176, 3149, 3526
MbiI CCGCTC 1 cut(s) 3575
MfeI CAATTG 1 cut(s) 3567
MflI RGATCY 7 cut(s) 715, 911, 1816, 2079, 2899, 3035, 3096
MhlI GDGCHC 5 cut(s) 431, 706, 1341, 2026, 3204
MlsI TGGCCA 1 cut(s) 2797
MluNI TGGCCA 1 cut(s) 2797
MlyI GAGTC 6 cut(s) 340, 451, 2077, 2738, 2914, 3269
MmeI TCCRAC 6 cut(s) 99, 1093, 1738, 2107, 2166, 3063
Mox20I TGGCCA 1 cut(s) 2797
Mph1103I ATGCAT 2 cut(s) 968, 1627
MroI TCCGGA 2 cut(s) 250, 2830
MroXI GAANNNNTTC 2 cut(s) 1308, 1995
MscI TGGCCA 1 cut(s) 2797
MslI CAYNNNNRTG 2 cut(s) 654, 786
Msp20I TGGCCA 1 cut(s) 2797
MspA1I CMGCKG 1 cut(s) 1288
MspCI CTTAAG 1 cut(s) 326
MspI CCGG 3 cut(s) 251, 2714, 2831
MspR9I CCNGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
MunI CAATTG 1 cut(s) 3567
Mva1269I GAATGC 2 cut(s) 682, 892
MvaI CCWGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
MvnI CGCG 1 cut(s) 3541
NmeAIII GCCGAG 2 cut(s) 2521, 3212
NmuCI GTSAC 3 cut(s) 509, 1116, 3526
NsiI ATGCAT 2 cut(s) 968, 1627
NspI RCATGY 8 cut(s) 653, 970, 1523, 1706, 2990, 3007, 3029, 3392
NspV TTCGAA 1 cut(s) 2472
PaeI GCATGC 3 cut(s) 653, 3029, 3392
PaeR7I CTCGAG 2 cut(s) 36, 1258
PciI ACATGT 2 cut(s) 2986, 3003
PcsI WCGNNNNNNNCGW 2 cut(s) 54, 2240
PctI GAATGC 2 cut(s) 682, 892
PdmI GAANNNNTTC 2 cut(s) 1308, 1995
PfeI GAWTC 6 cut(s) 43, 107, 851, 877, 2507, 3064
PflMI CCANNNNNTGG 3 cut(s) 103, 1169, 1714
PfoI TCCNGGA 2 cut(s) 102, 2944
PleI GAGTC 6 cut(s) 339, 451, 2076, 2737, 2914, 3268
PpsI GAGTC 6 cut(s) 339, 451, 2076, 2737, 2914, 3268
Ppu21I YACGTR 1 cut(s) 1631
PpuMI RGGWCCY 1 cut(s) 1727
PscI ACATGT 2 cut(s) 2986, 3003
PshAI GACNNNNGTC 1 cut(s) 774
PshBI ATTAAT 1 cut(s) 1245
PsiI TTATAA 1 cut(s) 2690
Psp124BI GAGCTC 2 cut(s) 2026, 3204
Psp5II RGGWCCY 1 cut(s) 1727
Psp6I CCWGG 7 cut(s) 102, 1206, 2792, 2797, 2944, 3116, 3345
PspFI CCCAGC 2 cut(s) 2737, 3334
PspGI CCWGG 7 cut(s) 102, 1206, 2792, 2797, 2944, 3116, 3345
PspOMI GGGCCC 2 cut(s) 427, 1337
PspPPI RGGWCCY 1 cut(s) 1727
PspXI VCTCGAGB 1 cut(s) 36
PstI CTGCAG 3 cut(s) 844, 1891, 3096
PstNI CAGNNNCTG 1 cut(s) 880
PsuI RGATCY 7 cut(s) 715, 911, 1816, 2079, 2899, 3035, 3096
RsaI GTAC 6 cut(s) 1391, 1453, 1831, 1940, 3469, 3603
RsaNI GTAC 6 cut(s) 1390, 1452, 1830, 1939, 3468, 3602
RseI CAYNNNNRTG 2 cut(s) 654, 786
SacI GAGCTC 2 cut(s) 2026, 3204
SchI GAGTC 6 cut(s) 340, 451, 2077, 2738, 2914, 3269
ScrFI CCNGG 7 cut(s) 104, 1208, 2794, 2799, 2946, 3118, 3347
SduI GDGCHC 5 cut(s) 431, 706, 1341, 2026, 3204
SfcI CTRYAG 5 cut(s) 209, 840, 1887, 3092, 3405
Sfr274I CTCGAG 2 cut(s) 36, 1258
SfuI TTCGAA 1 cut(s) 2472
SinI GGWCC 3 cut(s) 94, 1727, 2160
SlaI CTCGAG 2 cut(s) 36, 1258
SmiMI CAYNNNNRTG 2 cut(s) 654, 786
SmlI CTYRAG 9 cut(s) 36, 326, 584, 811, 919, 1258, 1295, 1736, 2198
SmoI CTYRAG 9 cut(s) 36, 326, 584, 811, 919, 1258, 1295, 1736, 2198
SpeI ACTAGT 1 cut(s) 1826
SphI GCATGC 3 cut(s) 653, 3029, 3392
SspI AATATT 2 cut(s) 1638, 3309
SspMI CTAG 8 cut(s) 927, 1343, 1406, 1827, 1836, 3176, 3417, 3464
SstI GAGCTC 2 cut(s) 2026, 3204
StyD4I CCNGG 7 cut(s) 102, 1206, 2792, 2797, 2944, 3116, 3345
StyI CCWWGG 2 cut(s) 1146, 2413
TaaI ACNGT 6 cut(s) 1559, 2076, 2176, 2408, 2771, 2892
TaiI ACGT 6 cut(s) 74, 1278, 1633, 1809, 2559, 3198
TaqI TCGA 8 cut(s) 37, 57, 282, 849, 1095, 1259, 2472, 2648
TatI WGTACW 1 cut(s) 1829
TauI GCSGC 2 cut(s) 2378, 3544
TfiI GAWTC 6 cut(s) 43, 107, 851, 877, 2507, 3064
TscAI CASTG 8 cut(s) 700, 832, 1125, 1533, 2081, 2179, 2774, 3096
TseFI GTSAC 3 cut(s) 509, 1116, 3526
Tsp45I GTSAC 3 cut(s) 509, 1116, 3526
TspGWI ACGGA 4 cut(s) 764, 1955, 2303, 3032
TspRI CASTG 8 cut(s) 700, 832, 1125, 1533, 2081, 2179, 2774, 3096
Van91I CCANNNNNTGG 3 cut(s) 103, 1169, 1714
Vha464I CTTAAG 1 cut(s) 326
VpaK11BI GGWCC 3 cut(s) 94, 1727, 2160
VspI ATTAAT 1 cut(s) 1245
XapI RAATTY 7 cut(s) 183, 732, 899, 1361, 2638, 2654, 3209
XbaI TCTAGA 2 cut(s) 1405, 1835
XceI RCATGY 8 cut(s) 653, 970, 1523, 1706, 2990, 3007, 3029, 3392
XcmI CCANNNNNNNNNTGG 1 cut(s) 3046
XhoI CTCGAG 2 cut(s) 36, 1258
XmnI GAANNNNTTC 2 cut(s) 1308, 1995
XspI CTAG 8 cut(s) 927, 1343, 1406, 1827, 1836, 3176, 3417, 3464
Zsp2I ATGCAT 2 cut(s) 968, 1627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.