Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0012378

Physical Location & Seq

Genomic Coordinates Reverse (-)

29205374 .. 29217311

Gene Structure 11938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G336100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3609 bp

ATGGAAGAAAACAACAGTAACAACGTGGCTAGCAACGTGGCCCAAGCCATTGCCGTAGCTCTCGACTGGAGCTCCACTTCCGATGCTCGCAAAGCAGCCGTTGCTTTCCTCGAATCCATTAAAGCCGGAGATGTACGCGTTTTGGCAAACACATCATTCCATCTAGTGAAAAAAGATTGGTCTTCCGAAATTCGGTTGCATGCATTTAAAATGTTACAGCATTTGGTCCGGTTGAGGTGGGAAGAATTAAGCCCTACAGAGCGTAGAAACTTTGCAAATATCACTGTTGATTTAATGTCAGATATTGCAAATCCCAGTGAGGAGTGGGCTTTGAAAAGTCAGACAGCGGCCCTTGTTGCTGAGATGGTTAGAAGAGAAGGACTAAATCTTTGGCAAGAACTGCTTCCAACTCTGGTTTCATTATCTTACAAGGGACCTATACAAGCTGAGTTGGTCTGCATGATGCTAAGGTGGCTTCCTGAAGATATTACTGTTCACAATGAAGATTTGGAAGGTGATCGGAGAAGGTTATTGTTGCGTGGGCTGACGCAATCTTTACCTGAAATATTGCCTCTATTATACACTTTACTAGAGAGGCACTTTGGAGCTGTGTTGAATGAAGCAGGAAAACAACAATTGGACCTCGCAAAACAACATGCAGCAACAGTAACAGCTACTTTGAATGCTGTTAATGCATATTCTGAATGGGCTCCATTGCCTGATCTTGCAAAATATGGTATAATTCATGGGTGTGGTTTCTTACTTTCTTCACCTGACTTCTGTCTTCATGCTTGTGAGTTTTTCAAACTTGTTTCCCAAAGGAAGAGACCTATTGATGATACCTCTGCTCCGGAATTTGATTCTGCAATGAGTAATATCTTTCATATATTGATGAATGTCTCCAAAGAATTTTTGTACAGATCAGGCCCCAGTGCTGGGGTAATTGATGAAAGCGATATTGAGTTTGCGGAATATATATGTGAAAGTATGGTATCTTTGGGTTCTACAAACTTGCAATGCATTGCTGGTGATAGCACCATGCTAGGTCTTTATTTACAACAGATGCTAGGTTTTTTTCAGCATTTGAAGCTAGCTCTTCACTTTCAATCTCTCCACTTTTGGCTGGCACTAATGAGAGACTTGATGTCAAAGCCAAAGGCTGTTGCTCGCTCAGCTGGAGATGGTTCTGACCCAGTCGATACTGAAAAGAGAAAGATCTTAAGTTTTTTGAGTGATGAAATATGTAGTGCAATTCTGGATGTATCTTTCCAACACATGCTCAAGCGAGAAAAGGTTCTTCATGGAACATCATTTGCTTTGGGGCCGTTGGAGTTATGGAGTGATGATGCTGAGGGAAAGGGAAATTTTGGCCAGTATCGTTCAAAGTTGTTAGAACTGGTCAAGTTGGTGACTTCATACAAGCCTCTTATAGCTGGGGCTAATGTTTCTGAAAGAATTGATAAAATCATCAAAAACCTCTTGCTTTCTCCAATGCCTGCTCAGGACTTAGCTGTGATGGAAAGCATGCAGCTGGCTTTAGAAAATGTTGTAAGCACTATTTTTGATGGATCAAATGAAATTGGTGGGGGTCATTCTGAAGTTCAACATGGCATGTGCAAAATATTTGAAGGTTTGCTTCAGCAACTTCTTTCTTTGAAGTGGACTGAGCCGGCCCTTGTGGAAGTACTGGGGCACTACTTGGATGCAATGGGGCCATTTTTGAAGTATTTTCCAGATGCTGCAGGCAGTGTCATTAATAAATTATTTGAGCTCCTAAACTCACTTCCTTTTGTTGTTAAGGATCCATCTACAAATAGTGCACGGTACGCAAGGTTACAAATTTGTACATCATTTATTCGTATAGCCAAAACTGCTGACAAAAGTATTCTACCTCACATGAAGGGTATAGCTGACACCATGGCGTATATGCAAAGAGAAGGTTGTTTGCTTCGTGGTGAACATAATCTTCTAGGTGAAGCGTTTCTTGTCATGGCTTCTGCTGCTGGAATTCAGCAGCAGCAAGAAGTTTTGGCCTGGTTACTAGAACCCTTGAGCCAGCAATGGACGCAGCTTGAGTGGCAAAATAATTATCTATCTGAACCACTAGGTCTTGTTCGCTTGTGCTCTGAGACCCCAGTTATGTGGTCAGTTTTCCACACTATCACATTCTTTGAGAAAGCACTTAAGAGAAGTGGAACCAGAAAAGCGCATTTGAATTTGCAAAACAACTCAACAGAAACTGCTACTCCCTTGCACCCTATGGCTTCTCATCTCTCATGGATGCTGCCACCTCTTCCAAAACTGCTTCGCTCCATTCATTCCCTTTGGTCTCCATCTGTATCCCAAACACTTCCTGGAGAGATTAAAGCTGCAATGACCATGAGTGATGTTGAGCAATTCAGTCTTCTTGGTGAAGGAAACCCTAAATTTTCAAAGGGTGCAGTAACCTTTTCTAGTGGATCTCTTATCAGTGCAAGTAAGGAAGGATACACAGAGCCAAATGAATCAGACATACGAAATTGGTTGAAAGGTATCAGAGACAGTGGGTACAATGTATTGGGCTTGGCAACCACTGTTGGGGGCTCATTTTACAAATGTTTGGATAGTCAATCTGTTGCTCTAGCTCTAGTGGAGAATATACATTCAATGGAATTCAGACATATCAGACTGCTTGTTCATTCAGTTTTAATTCCCTTGGTTAAATTTTGCCCTGTGGATTTGTGGGAGACATGGTTAGAGAAGCTCTTGCACCCATTATTTCAACACTCCCAGCAGGCTCTTAGTTGCTCCTGGTCCAGTCTTCTACGTGAAGGAAGAGCAAAGGTCCCAGATGCCCATGCCATACTCGCTGGGTCAGACTTAAAAGTGGAAGTAATGGAAGAAAAGCTACTTAGGGATTTAACTCGGGAGATTTGTTCACTCCTCTCTGTTATAGCTTCACCACAGCTAAATACCGGGCTTCCTTCCTTGGAGCACTCTGGGCATGTTAGTCGTGTTGACGTTTCTTCACTCAAAGATTTGGATGCATTCACTTCAAGCTCTATGGTTGGTTTCCTTTTGAAGCACAAAGGTCTTGCCCTTCCAGCGCTGCAGATATGTTTAGAAGCTTTTACATGGACAGATGGTGAATCCATGACTAAAGTTTCTTCCTTTTGTGCTGCCTTGGTTGCTCTAACGATATCAACAAATAGTACGGAACTCCAACAATTTGTGTCTAAGGATCTCTTTTCTGCAATCATCCAAGGTTTAGCCCTTGAATCAAATGCTTTCATCAGTGCTGATTTGATTAGTCTCTGTCGTGATATATACATATATCTTTGTGATAGAGATCCAACTCCTAGGCAGGTTCTGCTCTCACTCCCTTGTATCAAACAGCACGATTTGCTTGCTTTTGAAGAAGCTTTGACGAAGACATATAGTCCCAAAGAACAAAAGCAACATATGAAAAGCTTGCTATTACTAGCTACTGGAAACAAGTTGAAAGCCCTTGTTGCTCAGAAAAGCGTAAATGTAATAACAAATGTATCAACAAGGCCTCGCAACACCGTCAACGTTGCAGAAACCAGAGTAGATGAGGGAGAGAGTGTTGGACTGGCAGCCATATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006403 GO:0006405 GO:0006810 GO:0006913 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009798 GO:0009909 GO:0009910 GO:0009943 GO:0009944 GO:0009955 GO:0009965 GO:0010016 GO:0015931 GO:0022622 GO:0031074 GO:0032386 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0032991 GO:0033036 GO:0033157 GO:0042565 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046822 GO:0046825 GO:0046907 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048580 GO:0048581 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050793 GO:0051049 GO:0051093 GO:0051168 GO:0051169 GO:0051179 GO:0051223 GO:0051234 GO:0051236 GO:0051239 GO:0051241 GO:0051641 GO:0051649 GO:0060341 GO:0061716 GO:0065001 GO:0065007 GO:0070201 GO:0071702 GO:0071705 GO:0090087 GO:0097064 GO:0097159 GO:0099402 GO:0140104 GO:0140142 GO:1901363 GO:1903827 GO:1905392 GO:1990428 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

1203

Amino Acids

133.31

Weight (kDa)

5.95

Isoelectric Point (pI)

42.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05040 AT3G05040
fragaria_vesca	FvH4_6g04110
malus_domestica	MD04G1216400.v1.1 MD12G1232900.v1.1
prunus_persica	Prupe.6G336100_v2.0.a1
pyrus_communis	pycom04g19230 pycom12g21520
rosa_chinensis	RchiOBHm_Chr3g0452661
rosa_multiflora	Rmu_co8350293.1_g000001 Rmu_sc0034779.1_g000001 Rmu_ssc0000156.1_g000010
rosa_roxburghii	Rroxscaffold_6G00429700
rosa_rugosa	Rorug02G0642500.1
rosa_samantha	Rh3AG044700 Rh3BG047000 Rh3CG045500 Rh3DG045900
rosa_wichuraiana	Rw3G003490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	3334
AccII	CGCG	1 cut(s)	138
AccIII	TCCGGA	1 cut(s)	850
AciI	CCGC	2 cut(s)	347, 968
AclI	AACGTT	1 cut(s)	3552
AclWI	GGATC	6 cut(s)	1576, 1796, 1809, 2467, 3228, 3323
AcoI	YGGCCR	1 cut(s)	1369
AcuI	CTGAAG	3 cut(s)	501, 1617, 1622
AfaI	GTAC	7 cut(s)	135, 917, 1686, 1826, 1846, 2549, 3193
AfeI	AGCGCT	1 cut(s)	3087
AfiI	CCNNNNNNNGG	4 cut(s)	192, 935, 936, 2577
AflII	CTTAAG	2 cut(s)	1219, 2183
AflIII	ACRYGT	1 cut(s)	136
AhdI	GACNNNNNGTC	2 cut(s)	1144, 3417
AjnI	CCWGG	3 cut(s)	2033, 2353, 2789
AjuI	GAANNNNNNNTTGG	2 cut(s)	400, 432
Alw21I	GWGCWC	5 cut(s)	74, 1773, 1822, 2126, 2976
Alw26I	GTCTC	8 cut(s)	820, 904, 1131, 2123, 2334, 2532, 2720, 3296
Alw44I	GTGCAC	1 cut(s)	1818
AlwI	GGATC	6 cut(s)	1576, 1796, 1809, 2467, 3228, 3323
AlwNI	CAGNNNCTG	3 cut(s)	1739, 2240, 3349
Ama87I	CYCGRG	1 cut(s)	2904
Aor13HI	TCCGGA	1 cut(s)	850
Aor51HI	AGCGCT	1 cut(s)	3087
AoxI	GGCC	9 cut(s)	39, 348, 925, 1322, 1369, 1671, 1712, 2031, 3533
ApaLI	GTGCAC	1 cut(s)	1818
ArsI	GACNNNNNNTTYG	2 cut(s)	372, 404
AseI	ATTAAT	1 cut(s)	1755
Asp700I	GAANNNNTTC	3 cut(s)	402, 1293, 1980
AspA2I	CCTAGG	1 cut(s)	3338
AspLEI	GCGC	2 cut(s)	2209, 3088
AsuC2I	CCSGG	1 cut(s)	2956
AsuHPI	GGTGA	9 cut(s)	527, 762, 1040, 1420, 1967, 1985, 2423, 2931, 3137
AsuNHI	GCTAGC	2 cut(s)	29, 1090
AvaI	CYCGRG	1 cut(s)	2904
AvaII	GGWCC	5 cut(s)	226, 434, 640, 2793, 2824
AvrII	CCTAGG	1 cut(s)	3338
BaeGI	GKGCMC	2 cut(s)	1695, 1822
BaeI	ACNNNNGTAYC	2 cut(s)	3507, 3540
BalI	TGGCCA	1 cut(s)	1371
BamHI	GGATCC	1 cut(s)	1801
BanII	GRGCYC	4 cut(s)	74, 712, 1773, 2585
BarI	GAAGNNNNNNTAC	2 cut(s)	2871, 2903
BbsI	GAAGAC	5 cut(s)	174, 776, 2396, 2792, 3416
Bbv12I	GWGCWC	5 cut(s)	74, 1773, 1822, 2126, 2976
BbvCI	CCTCAGC	1 cut(s)	1350
BccI	CCATC	8 cut(s)	168, 358, 1175, 1510, 1559, 1813, 2341, 3116
BceAI	ACGGC	3 cut(s)	38, 83, 1309
BcgI	CGANNNNNNTGC	4 cut(s)	2972, 3006, 3368, 3402
BciT130I	CCWGG	3 cut(s)	2035, 2355, 2791
BciVI	GTATCC	2 cut(s)	2350, 2480
BcnI	CCSGG	1 cut(s)	2956
BcoDI	GTCTC	8 cut(s)	820, 904, 1131, 2123, 2334, 2532, 2720, 3296
BfmI	CTRYAG	3 cut(s)	255, 1740, 3089
BfoI	RGCGCY	1 cut(s)	3089
BfrI	CTTAAG	2 cut(s)	1219, 2183
BfuAI	ACCTGC	1 cut(s)	3334
BfuI	GTATCC	2 cut(s)	2350, 2480
BglII	AGATCT	1 cut(s)	1215
BlnI	CCTAGG	1 cut(s)	3338
BlpI	GCTNAGC	1 cut(s)	1171
BmcAI	AGTACT	1 cut(s)	1686
Bme1390I	CCNGG	4 cut(s)	2035, 2355, 2791, 2956
Bme18I	GGWCC	5 cut(s)	226, 434, 640, 2793, 2824
BmeRI	GACNNNNNGTC	2 cut(s)	1144, 3417
BmeT110I	CYCGRG	1 cut(s)	2904
BmiI	GGNNCC	8 cut(s)	435, 711, 928, 1323, 1713, 1803, 2197, 2826
BmrFI	CCNGG	4 cut(s)	2035, 2355, 2791, 2956
BmrI	ACTGGG	5 cut(s)	309, 924, 1187, 1697, 2129
BmsI	GCATC	9 cut(s)	73, 453, 1053, 1336, 1693, 1726, 2271, 2821, 3013
BmtI	GCTAGC	2 cut(s)	33, 1094
BmuI	ACTGGG	5 cut(s)	309, 924, 1187, 1697, 2129
BoxI	GACNNNNGTC	1 cut(s)	780
BpiI	GAAGAC	5 cut(s)	174, 776, 2396, 2792, 3416
BpmI	CTGGAG	3 cut(s)	88, 1197, 2376
Bpu10I	CCTNAGC	3 cut(s)	467, 1350, 1500
Bpu1102I	GCTNAGC	1 cut(s)	1171
BpuEI	CTTGAG	3 cut(s)	1265, 2071, 2093
BpuMI	CCSGG	1 cut(s)	2956
BsaAI	YACGTR	1 cut(s)	2807
BsaBI	GATNNNNATC	1 cut(s)	3327
BsaI	GGTCTC	3 cut(s)	820, 2123, 2334
BsaJI	CCNNGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
BsaWI	WCCGGW	2 cut(s)	228, 850
Bsc4I	CCNNNNNNNGG	4 cut(s)	192, 935, 936, 2577
Bse118I	RCCGGY	1 cut(s)	1669
Bse3DI	GCAATG	8 cut(s)	48, 713, 873, 1020, 1022, 1713, 2066, 2379
Bse8I	GATNNNNATC	1 cut(s)	3327
BseAI	TCCGGA	1 cut(s)	850
BseBI	CCWGG	3 cut(s)	2035, 2355, 2791
BseDI	CCNNGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
BseGI	GGATG	5 cut(s)	1264, 1708, 2286, 3028, 3237
BseJI	GATNNNNATC	1 cut(s)	3327
BseLI	CCNNNNNNNGG	4 cut(s)	192, 935, 936, 2577
BseMI	GCAATG	8 cut(s)	48, 713, 873, 1020, 1022, 1713, 2066, 2379
BseMII	CTCAG	8 cut(s)	351, 438, 1185, 1341, 1514, 1656, 2118, 3509
BseRI	GAGGAG	2 cut(s)	335, 2912
BseSI	GKGCMC	2 cut(s)	1695, 1822
BseYI	CCCAGC	4 cut(s)	935, 1433, 2769, 2849
BsgI	GTGCAG	1 cut(s)	2460
Bsh1236I	CGCG	1 cut(s)	138
BshFI	GGCC	9 cut(s)	41, 350, 927, 1324, 1371, 1673, 1714, 2033, 3535
BsiHKAI	GWGCWC	5 cut(s)	74, 1773, 1822, 2126, 2976
BsiHKCI	CYCGRG	1 cut(s)	2904
BsiSI	CCGG	5 cut(s)	126, 229, 851, 1670, 2955
BslFI	GGGAC	3 cut(s)	447, 2810, 3405
BslI	CCNNNNNNNGG	4 cut(s)	192, 935, 936, 2577
BsmAI	GTCTC	8 cut(s)	820, 904, 1131, 2123, 2334, 2532, 2720, 3296
BsmFI	GGGAC	3 cut(s)	447, 2810, 3405
BsmI	GAATGC	2 cut(s)	688, 3026
BsnI	GGCC	9 cut(s)	41, 350, 927, 1324, 1371, 1673, 1714, 2033, 3535
Bso31I	GGTCTC	3 cut(s)	820, 2123, 2334
BsoBI	CYCGRG	1 cut(s)	2904
Bsp1286I	GDGCHC	8 cut(s)	74, 712, 1695, 1773, 1822, 2126, 2585, 2976
Bsp13I	TCCGGA	1 cut(s)	850
Bsp1407I	TGTACA	2 cut(s)	915, 1844
Bsp143I	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
Bsp1720I	GCTNAGC	1 cut(s)	1171
Bsp19I	CCATGG	1 cut(s)	1917
BspACI	CCGC	2 cut(s)	347, 968
BspANI	GGCC	9 cut(s)	41, 350, 927, 1324, 1371, 1673, 1714, 2033, 3535
BspCNI	CTCAG	8 cut(s)	352, 439, 1184, 1342, 1513, 1657, 2119, 3508
BspEI	TCCGGA	1 cut(s)	850
BspFNI	CGCG	1 cut(s)	138
BspLI	GGNNCC	8 cut(s)	435, 711, 928, 1323, 1713, 1803, 2197, 2826
BspMAI	CTGCAG	2 cut(s)	1744, 3093
BspMI	ACCTGC	1 cut(s)	3334
BspOI	GCTAGC	2 cut(s)	33, 1094
BspPI	GGATC	6 cut(s)	1576, 1796, 1809, 2467, 3228, 3323
BspQI	GCTCTTC	2 cut(s)	1101, 2809
BspTI	CTTAAG	2 cut(s)	1219, 2183
BspTNI	GGTCTC	3 cut(s)	820, 2123, 2334
BsrDI	GCAATG	8 cut(s)	48, 713, 873, 1020, 1022, 1713, 2066, 2379
BsrFI	RCCGGY	1 cut(s)	1669
BsrGI	TGTACA	2 cut(s)	915, 1844
BssAI	RCCGGY	1 cut(s)	1669
BssECI	CCNNGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
BssMI	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
BssT1I	CCWWGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
Bst2UI	CCWGG	3 cut(s)	2035, 2355, 2791
Bst4CI	ACNGT	8 cut(s)	17, 286, 493, 667, 1824, 2543, 2575, 3547
Bst6I	CTCTTC	5 cut(s)	367, 818, 1101, 2298, 2809
BstAFI	CTTAAG	2 cut(s)	1219, 2183
BstAPI	GCANNNNNTGC	4 cut(s)	101, 400, 3349, 3382
BstAUI	TGTACA	2 cut(s)	915, 1844
BstBAI	YACGTR	1 cut(s)	2807
BstDSI	CCRYGG	1 cut(s)	1917
BstF5I	GGATG	5 cut(s)	1264, 1708, 2286, 3028, 3237
BstFNI	CGCG	1 cut(s)	138
BstH2I	RGCGCY	1 cut(s)	3089
BstHHI	GCGC	2 cut(s)	2209, 3088
BstKTI	GATC	9 cut(s)	520, 724, 923, 1218, 1571, 1804, 2462, 3223, 3331
BstMAI	GTCTC	8 cut(s)	820, 904, 1131, 2123, 2334, 2532, 2720, 3296
BstMBI	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
BstNI	CCWGG	3 cut(s)	2035, 2355, 2791
BstNSI	RCATGY	6 cut(s)	203, 659, 1279, 1528, 1615, 2987
BstPAI	GACNNNNGTC	1 cut(s)	780
BstSCI	CCNGG	4 cut(s)	2033, 2353, 2789, 2954
BstSFI	CTRYAG	3 cut(s)	255, 1740, 3089
BstSLI	GKGCMC	2 cut(s)	1695, 1822
BstUI	CGCG	1 cut(s)	138
BstV2I	GAAGAC	5 cut(s)	174, 776, 2396, 2792, 3416
BstX2I	RGATCY	5 cut(s)	1215, 1801, 2459, 3220, 3328
BstXI	CCANNNNNNTGG	1 cut(s)	2142
BstYI	RGATCY	5 cut(s)	1215, 1801, 2459, 3220, 3328
BsuI	GTATCC	2 cut(s)	2350, 2480
BsuRI	GGCC	9 cut(s)	41, 350, 927, 1324, 1371, 1673, 1714, 2033, 3535
BtgI	CCRYGG	1 cut(s)	1917
BtsCI	GGATG	5 cut(s)	1264, 1708, 2286, 3028, 3237
BtsI	GCAGTG	1 cut(s)	1753
BtsIMutI	CAGTG	8 cut(s)	282, 322, 937, 1753, 2476, 2548, 2571, 3280
BveI	ACCTGC	1 cut(s)	3334
CaiI	CAGNNNCTG	3 cut(s)	1739, 2240, 3349
CfoI	GCGC	2 cut(s)	2209, 3088
Cfr10I	RCCGGY	1 cut(s)	1669
CseI	GACGC	2 cut(s)	556, 2074
Csp6I	GTAC	7 cut(s)	134, 916, 1685, 1825, 1845, 2548, 3192
CviQI	GTAC	7 cut(s)	134, 916, 1685, 1825, 1845, 2548, 3192
DpnI	GATC	9 cut(s)	519, 723, 922, 1217, 1570, 1803, 2461, 3222, 3330
DpnII	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
DraI	TTTAAA	1 cut(s)	208
DriI	GACNNNNNGTC	2 cut(s)	1144, 3417
EaeI	YGGCCR	1 cut(s)	1369
Eam1104I	CTCTTC	5 cut(s)	367, 818, 1101, 2298, 2809
Eam1105I	GACNNNNNGTC	2 cut(s)	1144, 3417
EarI	CTCTTC	5 cut(s)	367, 818, 1101, 2298, 2809
Ecl136II	GAGCTC	2 cut(s)	72, 1771
Eco130I	CCWWGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
Eco147I	AGGCCT	1 cut(s)	3535
Eco24I	GRGCYC	4 cut(s)	74, 712, 1773, 2585
Eco31I	GGTCTC	3 cut(s)	820, 2123, 2334
Eco32I	GATATC	1 cut(s)	3180
Eco47I	GGWCC	5 cut(s)	226, 434, 640, 2793, 2824
Eco47III	AGCGCT	1 cut(s)	3087
Eco53kI	GAGCTC	2 cut(s)	72, 1771
Eco57I	CTGAAG	3 cut(s)	501, 1617, 1622
Eco88I	CYCGRG	1 cut(s)	2904
EcoICRI	GAGCTC	2 cut(s)	72, 1771
EcoO109I	RGGNCCY	3 cut(s)	434, 926, 2824
EcoRI	GAATTC	2 cut(s)	2007, 2651
EcoRII	CCWGG	3 cut(s)	2033, 2353, 2789
EcoRV	GATATC	1 cut(s)	3180
EcoT14I	CCWWGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
EcoT22I	ATGCAT	4 cut(s)	205, 697, 1022, 3028
EcoT38I	GRGCYC	4 cut(s)	74, 712, 1773, 2585
ErhI	CCWWGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
FalI	AAGNNNNNCTT	8 cut(s)	387, 419, 1620, 1652, 1968, 2000, 3209, 3241
FaqI	GGGAC	3 cut(s)	447, 2810, 3405
FauNDI	CATATG	1 cut(s)	3441
FokI	GGATG	5 cut(s)	1271, 1715, 2293, 3035, 3224
FriOI	GRGCYC	4 cut(s)	74, 712, 1773, 2585
GlaI	GCGC	2 cut(s)	2208, 3087
GsaI	CCCAGC	4 cut(s)	939, 1437, 2773, 2853
GsuI	CTGGAG	3 cut(s)	88, 1197, 2376
HaeII	RGCGCY	1 cut(s)	3089
HaeIII	GGCC	9 cut(s)	41, 350, 927, 1324, 1371, 1673, 1714, 2033, 3535
HapII	CCGG	5 cut(s)	126, 229, 851, 1670, 2955
HgaI	GACGC	2 cut(s)	556, 2074
HhaI	GCGC	2 cut(s)	2209, 3088
Hin6I	GCGC	2 cut(s)	2207, 3086
HinP1I	GCGC	2 cut(s)	2207, 3086
HincII	GTYRAC	2 cut(s)	2998, 3550
HindII	GTYRAC	2 cut(s)	2998, 3550
HindIII	AAGCTT	3 cut(s)	3105, 3399, 3448
HinfI	GANTC	5 cut(s)	113, 860, 2504, 3128, 3257
HpaII	CCGG	5 cut(s)	126, 229, 851, 1670, 2955
HphI	GGTGA	9 cut(s)	527, 762, 1040, 1420, 1967, 1985, 2423, 2931, 3137
Hpy166II	GTNNAC	7 cut(s)	496, 1662, 1820, 1958, 2918, 2998, 3550
Hpy188III	TCNNGA	8 cut(s)	62, 479, 851, 1256, 1502, 1733, 2906, 3299
Hpy8I	GTNNAC	7 cut(s)	496, 1662, 1820, 1958, 2918, 2998, 3550
HpyCH4III	ACNGT	8 cut(s)	17, 286, 493, 667, 1824, 2543, 2575, 3547
HpyCH4IV	ACGT	5 cut(s)	24, 36, 2806, 3000, 3552
HpySE526I	ACGT	5 cut(s)	24, 36, 2806, 3000, 3552
HspAI	GCGC	2 cut(s)	2207, 3086
Kpn2I	TCCGGA	1 cut(s)	850
KroI	GCCGGC	1 cut(s)	1669
KroNI	GCCGGC	1 cut(s)	1671
Kzo9I	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
LguI	GCTCTTC	2 cut(s)	1101, 2809
LmnI	GCTCC	9 cut(s)	69, 77, 605, 715, 853, 1776, 2315, 2792, 2971
LweI	GCATC	9 cut(s)	73, 453, 1053, 1336, 1693, 1726, 2271, 2821, 3013
MaeII	ACGT	5 cut(s)	24, 36, 2806, 3000, 3552
MaeIII	GTNAC	7 cut(s)	17, 213, 667, 1408, 1833, 2037, 2443
MalI	GATC	9 cut(s)	519, 723, 922, 1217, 1570, 1803, 2461, 3222, 3330
MboI	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
MfeI	CAATTG	1 cut(s)	635
MflI	RGATCY	5 cut(s)	1215, 1801, 2459, 3220, 3328
MhlI	GDGCHC	8 cut(s)	74, 712, 1695, 1773, 1822, 2126, 2585, 2976
MlsI	TGGCCA	1 cut(s)	1371
MluI	ACGCGT	1 cut(s)	136
MluNI	TGGCCA	1 cut(s)	1371
MmeI	TCCRAC	6 cut(s)	431, 1294, 1308, 3226, 3356, 3568
Mox20I	TGGCCA	1 cut(s)	1371
Mph1103I	ATGCAT	4 cut(s)	205, 697, 1022, 3028
MroI	TCCGGA	1 cut(s)	850
MroNI	GCCGGC	1 cut(s)	1669
MroXI	GAANNNNTTC	3 cut(s)	402, 1293, 1980
MscI	TGGCCA	1 cut(s)	1371
MslI	CAYNNNNRTG	2 cut(s)	750, 792
Msp20I	TGGCCA	1 cut(s)	1371
MspA1I	CMGCKG	3 cut(s)	347, 1175, 1531
MspCI	CTTAAG	2 cut(s)	1219, 2183
MspI	CCGG	5 cut(s)	126, 229, 851, 1670, 2955
MspR9I	CCNGG	4 cut(s)	2035, 2355, 2791, 2956
MunI	CAATTG	1 cut(s)	635
Mva1269I	GAATGC	2 cut(s)	688, 3026
MvaI	CCWGG	3 cut(s)	2035, 2355, 2791
MvnI	CGCG	1 cut(s)	138
NaeI	GCCGGC	1 cut(s)	1671
NciI	CCSGG	1 cut(s)	2956
NcoI	CCATGG	1 cut(s)	1917
NdeI	CATATG	1 cut(s)	3441
NdeII	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
NgoMIV	GCCGGC	1 cut(s)	1669
NheI	GCTAGC	2 cut(s)	29, 1090
NlaIV	GGNNCC	8 cut(s)	435, 711, 928, 1323, 1713, 1803, 2197, 2826
NmuCI	GTSAC	1 cut(s)	1408
NsiI	ATGCAT	4 cut(s)	205, 697, 1022, 3028
NspI	RCATGY	6 cut(s)	203, 659, 1279, 1528, 1615, 2987
PaeI	GCATGC	2 cut(s)	203, 1528
PceI	AGGCCT	1 cut(s)	3535
PciSI	GCTCTTC	2 cut(s)	1101, 2809
PctI	GAATGC	2 cut(s)	688, 3026
PdiI	GCCGGC	1 cut(s)	1671
PdmI	GAANNNNTTC	3 cut(s)	402, 1293, 1980
PfeI	GAWTC	5 cut(s)	113, 860, 2504, 3128, 3257
PflFI	GACNNNGTC	1 cut(s)	1193
PfoI	TCCNGGA	1 cut(s)	2353
Ppu21I	YACGTR	1 cut(s)	2807
PpuMI	RGGWCCY	2 cut(s)	434, 2824
PshAI	GACNNNNGTC	1 cut(s)	780
PshBI	ATTAAT	1 cut(s)	1755
Psp124BI	GAGCTC	2 cut(s)	74, 1773
Psp1406I	AACGTT	1 cut(s)	3552
Psp5II	RGGWCCY	2 cut(s)	434, 2824
Psp6I	CCWGG	3 cut(s)	2033, 2353, 2789
PspFI	CCCAGC	4 cut(s)	935, 1433, 2769, 2849
PspGI	CCWGG	3 cut(s)	2033, 2353, 2789
PspN4I	GGNNCC	8 cut(s)	435, 711, 928, 1323, 1713, 1803, 2197, 2826
PspPPI	RGGWCCY	2 cut(s)	434, 2824
PstI	CTGCAG	2 cut(s)	1744, 3093
PstNI	CAGNNNCTG	3 cut(s)	1739, 2240, 3349
PsuI	RGATCY	5 cut(s)	1215, 1801, 2459, 3220, 3328
PsyI	GACNNNGTC	1 cut(s)	1193
PvuII	CAGCTG	2 cut(s)	1175, 1531
RsaI	GTAC	7 cut(s)	135, 917, 1686, 1826, 1846, 2549, 3193
RsaNI	GTAC	7 cut(s)	134, 916, 1685, 1825, 1845, 2548, 3192
RseI	CAYNNNNRTG	2 cut(s)	750, 792
SacI	GAGCTC	2 cut(s)	74, 1773
SapI	GCTCTTC	2 cut(s)	1101, 2809
Sau3AI	GATC	9 cut(s)	517, 721, 920, 1215, 1568, 1801, 2459, 3220, 3328
ScaI	AGTACT	1 cut(s)	1686
ScrFI	CCNGG	4 cut(s)	2035, 2355, 2791, 2956
SduI	GDGCHC	8 cut(s)	74, 712, 1695, 1773, 1822, 2126, 2585, 2976
SfaNI	GCATC	9 cut(s)	73, 453, 1053, 1336, 1693, 1726, 2271, 2821, 3013
SfcI	CTRYAG	3 cut(s)	255, 1740, 3089
SinI	GGWCC	5 cut(s)	226, 434, 640, 2793, 2824
SmiMI	CAYNNNNRTG	2 cut(s)	750, 792
SmlI	CTYRAG	5 cut(s)	1219, 1280, 2050, 2072, 2183
SmoI	CTYRAG	5 cut(s)	1219, 1280, 2050, 2072, 2183
SphI	GCATGC	2 cut(s)	203, 1528
SseBI	AGGCCT	1 cut(s)	3535
SsiI	CCGC	2 cut(s)	347, 968
SspI	AATATT	2 cut(s)	567, 1623
SstI	GAGCTC	2 cut(s)	74, 1773
StuI	AGGCCT	1 cut(s)	3535
StyD4I	CCNGG	4 cut(s)	2033, 2353, 2789, 2954
StyI	CCWWGG	6 cut(s)	1917, 2694, 2967, 3162, 3241, 3338
TaaI	ACNGT	8 cut(s)	17, 286, 493, 667, 1824, 2543, 2575, 3547
TaiI	ACGT	5 cut(s)	27, 39, 2809, 3003, 3555
TaqI	TCGA	3 cut(s)	63, 111, 1197
TatI	WGTACW	3 cut(s)	915, 1684, 1844
TauI	GCSGC	1 cut(s)	350
TfiI	GAWTC	5 cut(s)	113, 860, 2504, 3128, 3257
TscAI	CASTG	8 cut(s)	289, 322, 937, 1753, 2476, 2548, 2578, 3280
TseFI	GTSAC	1 cut(s)	1408
Tsp45I	GTSAC	1 cut(s)	1408
TspGWI	ACGGA	1 cut(s)	3209
TspRI	CASTG	8 cut(s)	289, 322, 937, 1753, 2476, 2548, 2578, 3280
Tth111I	GACNNNGTC	1 cut(s)	1193
Vha464I	CTTAAG	2 cut(s)	1219, 2183
VneI	GTGCAC	1 cut(s)	1818
VpaK11BI	GGWCC	5 cut(s)	226, 434, 640, 2793, 2824
VspI	ATTAAT	1 cut(s)	1755
XceI	RCATGY	6 cut(s)	203, 659, 1279, 1528, 1615, 2987
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2351
XmaJI	CCTAGG	1 cut(s)	3338
XmnI	GAANNNNTTC	3 cut(s)	402, 1293, 1980
ZrmI	AGTACT	1 cut(s)	1686
Zsp2I	ATGCAT	4 cut(s)	205, 697, 1022, 3028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.