Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0012378

Physical Location & Seq

Genomic Coordinates Forward (+)

2232660 .. 2241329

Gene Structure 8670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g04110.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3612 bp

ATGGAGGCGAGCAGCAACAATAGCAGCAACCTAGCTAGCAGCGTCGCCCAAGCCATTGCCGTCTCTCTCGACTGGACCTCCTCTCCCGACGCTCGCAAAGCCGCCGTTGCTTTCCTCGAATCCATTAAAACCGGAGATGTGCGTGTTTTGGCAAACACAGCGTTCCTTCTAGTGAAGAAGGATTGGTCTTCTGAAATTCGGTTGCATGCATTTAAAATGTTGCAGCATTTGGTCCGGTTGCGATGGGAGGAATTAAACCCAACAGAACATAGAAACTTTGCTAATGTCACTGTTGATCTAATGTCTGAGATTGCAAATCCTAGTGAAGAGTGGGCTTTGAAAAGTCAGACAGCAGCACTTGTAGCTGAGATAGTCAGAAGTGAAGGAGTAAATCTTTGGCAGGATCTGCTTCCAGCTCTGGTTTCCTTATCTGCAAAAGGTCCTATACAAGCTGAGTTGGTCTCCATGATGCTGAGGTGGCTTCCTGAAGACATTACTGTTCATAATGAAGATTTGGAAGCTGATCGGAGAAGGCTATTGTTGCGTGGGCTGACCCTATCGTTACCTGAAATCTTGCCTCTATTATACACTTTACTAGAGAGGCATTTTGGAGCTGCCTTGAGTGAAGCAGGGAAACAACAAGTGGGCCTTGCAAAACAACATGCATCTGCAGTAACAGCTACTTTGAATGCCGTTAATGCATATTCTGAATGGGCTCCATTGCCTGATCTTGCTAAATATGGTATAATTCATGGGTGTGGCTTCTTACTTTCTTCACCTGACTTCCGTCTTCATGCTTGTGAGTTTTTCAAACTTGTTTCCGCAAGAAAGAGACATGCTGATACATCCACTCCTGAATTTGATTCTGCAATGAGTACAGTTTTTCATATTTTAATGAACGCCTCCAAAGAACTTTTACACAGTTCTGGTGTCAATGCTGGGGCCATTGATGAAAGCAATATTGAGTTTGCGGAATGTTTATGTGAAAGTATGGTGTTTTTGGGTTCAACAAACTTGCAATGTATCATGGGTGATAGCACCGCATTACCTCTTTATTTACAACAGATGCTCGGGTTTTTTCAACATCAGAAGCTAGTTCTTCATTTCCAATCTCTCCATTTTTGGCTGGCACTCCTGAGAGACTTAATGTCTAAGCCAAAGGCAGCTGCAAACTCATCAGCTGATGGTTCTGACGAGGCTGATAAGGAAAAGCAGAAGATTTTGAGTTTTGTGAACGATGACATATGTAGTGCACTTCTGGATGTATCTTTCCAACGGTTGCTCAAGAGAGAAAAGATTCTTCATGGAACTTCATTTTCTTTGGGGCCGTTGGAGTTATGGAGTGATGATGTTGACAGCAAAGGAAATTTCGGCCAGTATCGCTCAAAGCTGTTAGAACTTATCAAGTTTGTGACCTCATACAAGCCTGTTATAGCCGGTGCCAAGGTTTCTGAAAGAATTGATACAATCATTAAAAGTCTCTTGCTTTCTCCAATGCCTTCTCAGGACTTGGCTGTGATGGAAAGCATGCAGTCTGCTCTAGAAAATGTCGTAAGCACTATTTTTGATGGATCAAATGTAATTGGTGGGGGTCATTCTGAAGTTCAAGTAGGACTATGCAGAATATTTGAAGGTTTGCTTCATCAGCTTCTCTCTTTGAATTGGACTGAGCCAGCCCTTGCGGAAGTACTTGGTCACTACTTGGGTGTGATGGGTCCATTTTTGAACTATTTCCCAGATGCAGCAGGCAGAGTCATCAATAAACTATTTGAGCTCCTAAACTCACTCCCTTTTGCTGTTAAGGATCCCTCTACAAGTAGTGCACGATATGCAAGGTTGCAAATTTGTACATCGTTTATTCATATAGCCAAGACTGCTGACAAAAGTATTCTTCCTCACATGAAGGGTATAGCTGACACCATGGCATATTTGCAAAAGGAAGGTCGTTTACTTCGTGGTGAACACAATCTTCTAGGCGAAGCATTTCTTGTCATGGCTTCTGCGGCTGGATTTCAGCAGCAGCAAGAAGTTTTGGCCTGGTTATTAGAACCCTTGAGCCAGCAATGGACACAAATAGAGTGGCAAAATAACTATTTATCTGAACCACTAGGACTTGTTCGTCTGTGTGTGGAGACCCCAACTATGTGGTCAATTTTCCACTGTATTACATTCTTTGAGAAGGCACTTAAGAGAAGTGGAACACGGAAAACACATTTGAGTTCACAAAACAACTCAGCCGCAAGTTCTACTCCCTTGCACCCTATGGCTTCTCATCTATCATGGATGCTGCCACCTCTTCCCAAACTTCTACGCGCCATACATTCCCTTTGGTCTCCATCCGTATCTCAAACTCTACCTGGAGAAATGAAAGCTGCAATGACCATGAGCGATGCTGAGCAATACAGTCTTCTTGGTGAAGGAAAACCTAAACTGTCCAAGGGTACATCAACCTCCGGTACTGGGCCTCTTGTCACCATGAGTAAGGAAGGGTACACAGAGCCAAATGAATCGGATATACGAAATTGGATGAAGGGGATCAGAGACAGTGGGTACAATGTATTGGGCCTGGCAACCACTGTCGGTGACTCATTCTACAAATGTTTGGACAGTCATTCTGTTGCTCTAGCTTTGGTAGAGAATATACAGTCAATGGAATTCAGGCATTTAAGACTACTTGTTCATTCAGTTTTGATTCCTTTGGTTAAAAATTGTCCTGTCGATTTGTGGGAGGTATGGCTGGAAAAGCTCCTGCACCCCTTACTTCTACACTCCAATCAGGCTCTTAGTTGCTCCTGGTCCAGTCTTCTACAAGAAGGTAGAGCAAAGGTTCCGGATGCCCAAGCCATACTTGCCGGGACTGACTCAAAAGTGGAAGTAATGGAAGAAAAGCTACTTAGAGATCTTACTCGAGAGATTTGTTCACTCCTCTCTCTCATTGCTTCCCCACAGCTAAATACTGGGCTTCCATCCTTGGAGCACTCTGGGCAAATCAGCCGAGTCGATCTATCTTCACTCAAAGCTTTAGATTCTTTTGCATCGAGCTCTATGGTTGGTTTCATTTTGAAGCACCAAGGTCTTGCCCTTCCTGCACTGCAGATATGTTTAGAAGCTTTTAAATGGACAGACGGTGAAGCCATGCCAAAAGTTTCTGTCTTTTGTGGTGCTTTGGTTGTTCTAGCTATATTTACAAATAGTATGGAACTCCAACAGTTTGTTGCTAAGGATCTTTTTTCTGCAATTATCCAAGGTTTAGCCCTTGAATCAAACGCTTTCATCAGTGCTGATTTGGTTGGTCACTGTCGTGACATATACATATATCTCTGCGATAGACATCCGGCTCCTAGGGAGGTTCTGCTCTCACTTCCCTGCATCAAACAGCATGATTTGCTTGCTTTTGAAGAAGCTTTGACAAAGACAGCTAGTCCTAAAGAACAAAAACAATATATGAAAAGCCTGCTCTTATTAGCTACTGGAAACAAGTTAAAAGCACTTGTTGCTCAGAAAACCGTAAATGTTATAACAAATGTAACAACAAAGCCTCGCAACACAGTCAACGTTGCGGAAAACAGAGTTGATGAGGGGGAGGTTATTGGACTGGCAGCAATATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003676 GO:0003723 GO:0005049 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006403 GO:0006405 GO:0006810 GO:0006913 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009798 GO:0009909 GO:0009910 GO:0009943 GO:0009944 GO:0009955 GO:0009965 GO:0010016 GO:0015931 GO:0022622 GO:0031074 GO:0032386 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0032991 GO:0033036 GO:0033157 GO:0042565 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046822 GO:0046825 GO:0046907 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048580 GO:0048581 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050657 GO:0050658 GO:0050789 GO:0050793 GO:0051049 GO:0051093 GO:0051168 GO:0051169 GO:0051179 GO:0051223 GO:0051234 GO:0051236 GO:0051239 GO:0051241 GO:0051641 GO:0051649 GO:0060341 GO:0061716 GO:0065001 GO:0065007 GO:0070201 GO:0071702 GO:0071705 GO:0090087 GO:0097064 GO:0097159 GO:0099402 GO:0140104 GO:0140142 GO:1901363 GO:1903827 GO:1905392 GO:1990428 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Xpo1

Protein Analysis

1204

Amino Acids

132.53

Weight (kDa)

6.08

Isoelectric Point (pI)

41.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	111 - 269	6.9e-25	Exportin 1-like protein
Exportin-5	PF19273	318 - 1168	1.1e-303	Exportin-5 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05040 AT3G05040
fragaria_vesca	FvH4_6g04110
malus_domestica	MD04G1216400.v1.1 MD12G1232900.v1.1
prunus_persica	Prupe.6G336100_v2.0.a1
pyrus_communis	pycom04g19230 pycom12g21520
rosa_chinensis	RchiOBHm_Chr3g0452661
rosa_multiflora	Rmu_co8350293.1_g000001 Rmu_sc0034779.1_g000001 Rmu_ssc0000156.1_g000010
rosa_roxburghii	Rroxscaffold_6G00429700
rosa_rugosa	Rorug02G0642500.1
rosa_samantha	Rh3AG044700 Rh3BG047000 Rh3CG045500 Rh3DG045900
rosa_wichuraiana	Rw3G003490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3518
AasI	GACNNNNNNGTC	1 cut(s)	2118
AccB1I	GGYRCC	1 cut(s)	1439
AccII	CGCG	1 cut(s)	2313
AccIII	TCCGGA	1 cut(s)	2830
AciI	CCGC	8 cut(s)	102, 822, 971, 1041, 1682, 2003, 2238, 3560
AclI	AACGTT	1 cut(s)	3555
AclWI	GGATC	6 cut(s)	411, 1579, 1799, 1812, 2543, 3231
AcoI	YGGCCR	1 cut(s)	1372
AcsI	RAATTY	5 cut(s)	195, 857, 1366, 1842, 2654
AcuI	CTGAAG	2 cut(s)	507, 1620
AfaI	GTAC	7 cut(s)	877, 1689, 1849, 2443, 2458, 2492, 2552
AfiI	CCNNNNNNNGG	1 cut(s)	2460
AflII	CTTAAG	1 cut(s)	2186
AhdI	GACNNNNNGTC	2 cut(s)	1147, 3420
AjnI	CCWGG	4 cut(s)	2036, 2356, 2565, 2792
AleI	CACNNNNGTG	1 cut(s)	3300
Alw21I	GWGCWC	5 cut(s)	1255, 1776, 1825, 2979, 3044
Alw26I	GTCTC	8 cut(s)	67, 466, 826, 1134, 1484, 2126, 2337, 2535
Alw44I	GTGCAC	2 cut(s)	1251, 1821
AlwI	GGATC	6 cut(s)	411, 1579, 1799, 1812, 2543, 3231
AlwNI	CAGNNNCTG	1 cut(s)	406
Ama87I	CYCGRG	2 cut(s)	1070, 2907
Aor13HI	TCCGGA	1 cut(s)	2830
AoxI	GGCC	7 cut(s)	646, 942, 1325, 1372, 2034, 2462, 2563
ApaLI	GTGCAC	2 cut(s)	1251, 1821
ApoI	RAATTY	5 cut(s)	195, 857, 1366, 1842, 2654
ArsI	GACNNNNNNTTYG	2 cut(s)	1927, 1959
Asp700I	GAANNNNTTC	3 cut(s)	1296, 1730, 1983
AspA2I	CCTAGG	1 cut(s)	3341
AspLEI	GCGC	1 cut(s)	2315
AsuC2I	CCSGG	1 cut(s)	2854
AsuHPI	GGTGA	7 cut(s)	768, 1043, 1970, 2426, 2464, 2594, 3140
AsuNHI	GCTAGC	1 cut(s)	35
AvaI	CYCGRG	2 cut(s)	1070, 2907
AvaII	GGWCC	5 cut(s)	75, 232, 440, 1715, 2796
AvrII	CCTAGG	1 cut(s)	3341
BaeGI	GKGCMC	2 cut(s)	1255, 1825
BamHI	GGATCC	1 cut(s)	1804
BanI	GGYRCC	1 cut(s)	1439
BanII	GRGCYC	3 cut(s)	718, 1776, 3044
BarI	GAAGNNNNNNTAC	4 cut(s)	1932, 1964, 2874, 2906
BbsI	GAAGAC	5 cut(s)	180, 495, 782, 2399, 2795
Bbv12I	GWGCWC	5 cut(s)	1255, 1776, 1825, 2979, 3044
BbvCI	CCTCAGC	1 cut(s)	473
BccI	CCATC	7 cut(s)	237, 1178, 1513, 1562, 1705, 2344, 2974
BceAI	ACGGC	4 cut(s)	44, 89, 677, 1312
BciT130I	CCWGG	4 cut(s)	2038, 2358, 2567, 2794
BcnI	CCSGG	1 cut(s)	2854
BcoDI	GTCTC	8 cut(s)	67, 466, 826, 1134, 1484, 2126, 2337, 2535
BfmI	CTRYAG	2 cut(s)	669, 3092
BfrI	CTTAAG	1 cut(s)	2186
BglII	AGATCT	1 cut(s)	2899
BlnI	CCTAGG	1 cut(s)	3341
BlpI	GCTNAGC	1 cut(s)	2394
BmcAI	AGTACT	1 cut(s)	1689
Bme1390I	CCNGG	5 cut(s)	2038, 2358, 2567, 2794, 2854
Bme18I	GGWCC	5 cut(s)	75, 232, 440, 1715, 2796
BmeRI	GACNNNNNGTC	2 cut(s)	1147, 3420
BmeT110I	CYCGRG	2 cut(s)	1070, 2907
BmiI	GGNNCC	8 cut(s)	717, 943, 1326, 1441, 1716, 1806, 2829, 3339
BmrFI	CCNGG	5 cut(s)	2038, 2358, 2567, 2794, 2854
BmrI	ACTGGG	2 cut(s)	2469, 2967
BmsI	GCATC	9 cut(s)	459, 674, 1056, 1729, 2274, 2380, 2824, 3044, 3378
BmtI	GCTAGC	1 cut(s)	39
BmuI	ACTGGG	2 cut(s)	2469, 2967
BoxI	GACNNNNGTC	1 cut(s)	786
BpiI	GAAGAC	5 cut(s)	180, 495, 782, 2399, 2795
BplI	GAGNNNNNCTC	2 cut(s)	446, 478
BpmI	CTGGAG	1 cut(s)	2379
Bpu10I	CCTNAGC	2 cut(s)	473, 3219
Bpu1102I	GCTNAGC	1 cut(s)	2394
BpuEI	CTTGAG	3 cut(s)	640, 1268, 2074
BpuMI	CCSGG	1 cut(s)	2854
BsaBI	GATNNNNATC	1 cut(s)	3330
BsaI	GGTCTC	3 cut(s)	466, 2126, 2337
BsaJI	CCNNGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
BsaWI	WCCGGW	4 cut(s)	131, 234, 2453, 2830
BsaXI	ACNNNNNCTCC	6 cut(s)	62, 67, 92, 97, 835, 865
Bsc4I	CCNNNNNNNGG	1 cut(s)	2460
Bse118I	RCCGGY	1 cut(s)	1436
Bse1I	ACTGG	7 cut(s)	77, 1375, 2464, 2799, 2962, 3475, 3600
Bse3DI	GCAATG	7 cut(s)	54, 719, 876, 1025, 2069, 2382, 2934
Bse8I	GATNNNNATC	1 cut(s)	3330
BseAI	TCCGGA	1 cut(s)	2830
BseBI	CCWGG	4 cut(s)	2038, 2358, 2567, 2794
BseDI	CCNNGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
BseGI	GGATG	8 cut(s)	845, 1267, 2289, 2336, 2532, 2839, 2966, 3331
BseJI	GATNNNNATC	1 cut(s)	3330
BseLI	CCNNNNNNNGG	1 cut(s)	2460
BseMI	GCAATG	7 cut(s)	54, 719, 876, 1025, 2069, 2382, 2934
BseNI	ACTGG	7 cut(s)	77, 1375, 2464, 2799, 2962, 3475, 3600
BseRI	GAGGAG	2 cut(s)	70, 2915
BseSI	GKGCMC	2 cut(s)	1255, 1825
BseYI	CCCAGC	1 cut(s)	938
BsgI	GTGCAG	2 cut(s)	2735, 3072
Bsh1236I	CGCG	1 cut(s)	2313
BshFI	GGCC	7 cut(s)	648, 944, 1327, 1374, 2036, 2464, 2565
BshNI	GGYRCC	1 cut(s)	1439
BsiHKAI	GWGCWC	5 cut(s)	1255, 1776, 1825, 2979, 3044
BsiHKCI	CYCGRG	2 cut(s)	1070, 2907
BsiSI	CCGG	7 cut(s)	132, 235, 1437, 2454, 2831, 2853, 3335
BslFI	GGGAC	1 cut(s)	2869
BslI	CCNNNNNNNGG	1 cut(s)	2460
BsmAI	GTCTC	8 cut(s)	67, 466, 826, 1134, 1484, 2126, 2337, 2535
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	1 cut(s)	2869
BsmI	GAATGC	1 cut(s)	694
BsnI	GGCC	7 cut(s)	648, 944, 1327, 1374, 2036, 2464, 2565
Bso31I	GGTCTC	3 cut(s)	466, 2126, 2337
BsoBI	CYCGRG	2 cut(s)	1070, 2907
Bsp1286I	GDGCHC	6 cut(s)	718, 1255, 1776, 1825, 2979, 3044
Bsp13I	TCCGGA	1 cut(s)	2830
Bsp1407I	TGTACA	1 cut(s)	1847
Bsp1720I	GCTNAGC	1 cut(s)	2394
Bsp19I	CCATGG	1 cut(s)	1920
BspACI	CCGC	8 cut(s)	102, 822, 971, 1041, 1682, 2003, 2238, 3560
BspANI	GGCC	7 cut(s)	648, 944, 1327, 1374, 2036, 2464, 2565
BspEI	TCCGGA	1 cut(s)	2830
BspFNI	CGCG	1 cut(s)	2313
BspHI	TCATGA	1 cut(s)	3608
BspLI	GGNNCC	8 cut(s)	717, 943, 1326, 1441, 1716, 1806, 2829, 3339
BspMAI	CTGCAG	2 cut(s)	673, 3096
BspOI	GCTAGC	1 cut(s)	39
BspPI	GGATC	6 cut(s)	411, 1579, 1799, 1812, 2543, 3231
BspT107I	GGYRCC	1 cut(s)	1439
BspTI	CTTAAG	1 cut(s)	2186
BspTNI	GGTCTC	3 cut(s)	466, 2126, 2337
BsrDI	GCAATG	7 cut(s)	54, 719, 876, 1025, 2069, 2382, 2934
BsrFI	RCCGGY	1 cut(s)	1436
BsrGI	TGTACA	1 cut(s)	1847
BsrI	ACTGG	7 cut(s)	77, 1375, 2464, 2799, 2962, 3475, 3600
BssAI	RCCGGY	1 cut(s)	1436
BssECI	CCNNGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
BssT1I	CCWWGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
Bst2UI	CCWGG	4 cut(s)	2038, 2358, 2567, 2794
Bst6I	CTCTTC	2 cut(s)	321, 2301
BstAFI	CTTAAG	1 cut(s)	2186
BstAPI	GCANNNNNTGC	4 cut(s)	406, 1829, 3385, 3494
BstAUI	TGTACA	1 cut(s)	1847
BstDSI	CCRYGG	1 cut(s)	1920
BstF5I	GGATG	8 cut(s)	845, 1267, 2289, 2336, 2532, 2839, 2966, 3331
BstFNI	CGCG	1 cut(s)	2313
BstHHI	GCGC	1 cut(s)	2315
BstMAI	GTCTC	8 cut(s)	67, 466, 826, 1134, 1484, 2126, 2337, 2535
BstNI	CCWGG	4 cut(s)	2038, 2358, 2567, 2794
BstNSI	RCATGY	4 cut(s)	209, 665, 839, 1531
BstPAI	GACNNNNGTC	1 cut(s)	786
BstSCI	CCNGG	5 cut(s)	2036, 2356, 2565, 2792, 2852
BstSFI	CTRYAG	2 cut(s)	669, 3092
BstSLI	GKGCMC	2 cut(s)	1255, 1825
BstUI	CGCG	1 cut(s)	2313
BstV2I	GAAGAC	5 cut(s)	180, 495, 782, 2399, 2795
BstX2I	RGATCY	4 cut(s)	403, 1804, 2899, 3223
BstXI	CCANNNNNNTGG	1 cut(s)	2145
BstYI	RGATCY	4 cut(s)	403, 1804, 2899, 3223
BsuRI	GGCC	7 cut(s)	648, 944, 1327, 1374, 2036, 2464, 2565
BtgI	CCRYGG	1 cut(s)	1920
BtgZI	GCGATG	2 cut(s)	256, 2403
BtsCI	GGATG	8 cut(s)	845, 1267, 2289, 2336, 2532, 2839, 2966, 3331
BtsI	GCAGTG	1 cut(s)	3089
BtsIMutI	CAGTG	7 cut(s)	288, 2158, 2551, 2574, 3089, 3283, 3295
CaiI	CAGNNNCTG	1 cut(s)	406
CciI	TCATGA	1 cut(s)	3608
CfoI	GCGC	1 cut(s)	2315
Cfr10I	RCCGGY	1 cut(s)	1436
CseI	GACGC	2 cut(s)	31, 98
Csp6I	GTAC	7 cut(s)	876, 1688, 1848, 2442, 2457, 2491, 2551
CspCI	CAANNNNNGTGG	2 cut(s)	2060, 2095
CviQI	GTAC	7 cut(s)	876, 1688, 1848, 2442, 2457, 2491, 2551
DraI	TTTAAA	2 cut(s)	214, 3115
DrdI	GACNNNNNNGTC	1 cut(s)	2118
DriI	GACNNNNNGTC	2 cut(s)	1147, 3420
DseDI	GACNNNNNNGTC	1 cut(s)	2118
EaeI	YGGCCR	1 cut(s)	1372
Eam1104I	CTCTTC	2 cut(s)	321, 2301
Eam1105I	GACNNNNNGTC	2 cut(s)	1147, 3420
EarI	CTCTTC	2 cut(s)	321, 2301
Ecl136II	GAGCTC	2 cut(s)	1774, 3042
Eco130I	CCWWGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
Eco24I	GRGCYC	3 cut(s)	718, 1776, 3044
Eco31I	GGTCTC	3 cut(s)	466, 2126, 2337
Eco47I	GGWCC	5 cut(s)	75, 232, 440, 1715, 2796
Eco53kI	GAGCTC	2 cut(s)	1774, 3042
Eco57I	CTGAAG	2 cut(s)	507, 1620
Eco88I	CYCGRG	2 cut(s)	1070, 2907
EcoICRI	GAGCTC	2 cut(s)	1774, 3042
EcoO109I	RGGNCCY	1 cut(s)	440
EcoRI	GAATTC	1 cut(s)	2654
EcoRII	CCWGG	4 cut(s)	2036, 2356, 2565, 2792
EcoT14I	CCWWGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
EcoT22I	ATGCAT	3 cut(s)	211, 667, 703
EcoT38I	GRGCYC	3 cut(s)	718, 1776, 3044
ErhI	CCWWGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
Esp3I	CGTCTC	1 cut(s)	67
FalI	AAGNNNNNCTT	8 cut(s)	633, 665, 1623, 1655, 1971, 2003, 2832, 2864
FaqI	GGGAC	1 cut(s)	2869
FauNDI	CATATG	1 cut(s)	1244
FokI	GGATG	8 cut(s)	832, 1274, 2296, 2323, 2539, 2846, 2953, 3318
FriOI	GRGCYC	3 cut(s)	718, 1776, 3044
GlaI	GCGC	1 cut(s)	2314
GsaI	CCCAGC	1 cut(s)	942
GsuI	CTGGAG	1 cut(s)	2379
HaeIII	GGCC	7 cut(s)	648, 944, 1327, 1374, 2036, 2464, 2565
HapII	CCGG	7 cut(s)	132, 235, 1437, 2454, 2831, 2853, 3335
HgaI	GACGC	2 cut(s)	31, 98
HhaI	GCGC	1 cut(s)	2315
Hin6I	GCGC	1 cut(s)	2313
HinP1I	GCGC	1 cut(s)	2313
HincII	GTYRAC	2 cut(s)	1354, 3553
HindII	GTYRAC	2 cut(s)	1354, 3553
HindIII	AAGCTT	3 cut(s)	3018, 3108, 3402
HpaII	CCGG	7 cut(s)	132, 235, 1437, 2454, 2831, 2853, 3335
HphI	GGTGA	7 cut(s)	768, 1043, 1970, 2426, 2464, 2594, 3140
Hpy99I	CGWCG	2 cut(s)	47, 92
HpyCH4IV	ACGT	1 cut(s)	3555
HpySE526I	ACGT	1 cut(s)	3555
HspAI	GCGC	1 cut(s)	2313
Kpn2I	TCCGGA	1 cut(s)	2830
LmnI	GCTCC	7 cut(s)	611, 721, 1779, 2751, 2795, 2974, 3343
LweI	GCATC	9 cut(s)	459, 674, 1056, 1729, 2274, 2380, 2824, 3044, 3378
MaeII	ACGT	1 cut(s)	3555
MflI	RGATCY	4 cut(s)	403, 1804, 2899, 3223
MhlI	GDGCHC	6 cut(s)	718, 1255, 1776, 1825, 2979, 3044
MlyI	GAGTC	4 cut(s)	1761, 2579, 2855, 3006
MmeI	TCCRAC	3 cut(s)	1297, 1311, 3229
Mph1103I	ATGCAT	3 cut(s)	211, 667, 703
MroI	TCCGGA	1 cut(s)	2830
MroXI	GAANNNNTTC	3 cut(s)	1296, 1730, 1983
MslI	CAYNNNNRTG	3 cut(s)	756, 798, 3300
MspA1I	CMGCKG	2 cut(s)	1166, 1181
MspCI	CTTAAG	1 cut(s)	2186
MspI	CCGG	7 cut(s)	132, 235, 1437, 2454, 2831, 2853, 3335
MspR9I	CCNGG	5 cut(s)	2038, 2358, 2567, 2794, 2854
Mva1269I	GAATGC	1 cut(s)	694
MvaI	CCWGG	4 cut(s)	2038, 2358, 2567, 2794
MvnI	CGCG	1 cut(s)	2313
NciI	CCSGG	1 cut(s)	2854
NcoI	CCATGG	1 cut(s)	1920
NdeI	CATATG	1 cut(s)	1244
NheI	GCTAGC	1 cut(s)	35
NlaIV	GGNNCC	8 cut(s)	717, 943, 1326, 1441, 1716, 1806, 2829, 3339
NmeAIII	GCCGAG	1 cut(s)	3020
NmuCI	GTSAC	7 cut(s)	286, 1411, 1694, 2470, 2582, 3293, 3302
NsiI	ATGCAT	3 cut(s)	211, 667, 703
NspI	RCATGY	4 cut(s)	209, 665, 839, 1531
OliI	CACNNNNGTG	1 cut(s)	3300
PaeI	GCATGC	2 cut(s)	209, 1531
PaeR7I	CTCGAG	1 cut(s)	2907
PagI	TCATGA	1 cut(s)	3608
PcsI	WCGNNNNNNNCGW	1 cut(s)	1951
PctI	GAATGC	1 cut(s)	694
PdmI	GAANNNNTTC	3 cut(s)	1296, 1730, 1983
PfeI	GAWTC	7 cut(s)	119, 863, 1297, 2507, 2692, 3026, 3260
PleI	GAGTC	4 cut(s)	1760, 2579, 2855, 3005
PpsI	GAGTC	4 cut(s)	1760, 2579, 2855, 3005
PpuMI	RGGWCCY	1 cut(s)	440
PshAI	GACNNNNGTC	1 cut(s)	786
PsiI	TTATAA	1 cut(s)	3518
Psp124BI	GAGCTC	2 cut(s)	1776, 3044
Psp1406I	AACGTT	1 cut(s)	3555
Psp5II	RGGWCCY	1 cut(s)	440
Psp6I	CCWGG	4 cut(s)	2036, 2356, 2565, 2792
PspFI	CCCAGC	1 cut(s)	938
PspGI	CCWGG	4 cut(s)	2036, 2356, 2565, 2792
PspN4I	GGNNCC	8 cut(s)	717, 943, 1326, 1441, 1716, 1806, 2829, 3339
PspPPI	RGGWCCY	1 cut(s)	440
PstI	CTGCAG	2 cut(s)	673, 3096
PstNI	CAGNNNCTG	1 cut(s)	406
PsuI	RGATCY	4 cut(s)	403, 1804, 2899, 3223
PvuII	CAGCTG	2 cut(s)	1166, 1181
RsaI	GTAC	7 cut(s)	877, 1689, 1849, 2443, 2458, 2492, 2552
RsaNI	GTAC	7 cut(s)	876, 1688, 1848, 2442, 2457, 2491, 2551
RseI	CAYNNNNRTG	3 cut(s)	756, 798, 3300
SacI	GAGCTC	2 cut(s)	1776, 3044
ScaI	AGTACT	1 cut(s)	1689
SchI	GAGTC	4 cut(s)	1761, 2579, 2855, 3006
ScrFI	CCNGG	5 cut(s)	2038, 2358, 2567, 2794, 2854
SduI	GDGCHC	6 cut(s)	718, 1255, 1776, 1825, 2979, 3044
SfaNI	GCATC	9 cut(s)	459, 674, 1056, 1729, 2274, 2380, 2824, 3044, 3378
SfcI	CTRYAG	2 cut(s)	669, 3092
Sfr274I	CTCGAG	1 cut(s)	2907
SinI	GGWCC	5 cut(s)	75, 232, 440, 1715, 2796
SlaI	CTCGAG	1 cut(s)	2907
SmiMI	CAYNNNNRTG	3 cut(s)	756, 798, 3300
SmlI	CTYRAG	5 cut(s)	619, 1283, 2053, 2186, 2907
SmoI	CTYRAG	5 cut(s)	619, 1283, 2053, 2186, 2907
SphI	GCATGC	2 cut(s)	209, 1531
SsiI	CCGC	8 cut(s)	102, 822, 971, 1041, 1682, 2003, 2238, 3560
SspI	AATATT	2 cut(s)	961, 1626
SstI	GAGCTC	2 cut(s)	1776, 3044
StyD4I	CCNGG	5 cut(s)	2036, 2356, 2565, 2792, 2852
StyI	CCWWGG	7 cut(s)	1443, 1920, 2436, 2970, 3070, 3244, 3341
TaiI	ACGT	1 cut(s)	3558
TaqI	TCGA	6 cut(s)	69, 117, 2718, 2908, 3000, 3038
TatI	WGTACW	3 cut(s)	875, 1687, 1847
TauI	GCSGC	3 cut(s)	104, 2006, 2240
TfiI	GAWTC	7 cut(s)	119, 863, 1297, 2507, 2692, 3026, 3260
TscAI	CASTG	7 cut(s)	295, 2165, 2551, 2581, 3096, 3283, 3302
TseFI	GTSAC	7 cut(s)	286, 1411, 1694, 2470, 2582, 3293, 3302
Tsp45I	GTSAC	7 cut(s)	286, 1411, 1694, 2470, 2582, 3293, 3302
TspGWI	ACGGA	3 cut(s)	776, 2218, 2329
TspRI	CASTG	7 cut(s)	295, 2165, 2551, 2581, 3096, 3283, 3302
Vha464I	CTTAAG	1 cut(s)	2186
VneI	GTGCAC	2 cut(s)	1251, 1821
VpaK11BI	GGWCC	5 cut(s)	75, 232, 440, 1715, 2796
XapI	RAATTY	5 cut(s)	195, 857, 1366, 1842, 2654
XbaI	TCTAGA	1 cut(s)	1540
XceI	RCATGY	4 cut(s)	209, 665, 839, 1531
XhoI	CTCGAG	1 cut(s)	2907
XmaJI	CCTAGG	1 cut(s)	3341
XmnI	GAANNNNTTC	3 cut(s)	1296, 1730, 1983
ZrmI	AGTACT	1 cut(s)	1689
Zsp2I	ATGCAT	3 cut(s)	211, 667, 703

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.