Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005223

Physical Location & Seq

Genomic Coordinates Reverse (-)

1617599 .. 1620702

Gene Structure 3104 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G05580.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 957 bp

ATGATGACGAGTATGGAAGGGATGATGGAGATGGGTGTATTGGATGATATTATAAGGAGATTGTTGGAAGGTAAAGGAGGTAAACAGGTTCAGCTTTCGGAGGTCGAGATCCGTCAACTTTGCGTTAACGCCAGACAAATCTTCCTTTCTCAGCCTAATCTTCTCGAGCTTCATGCCCCCATTCGCATCTGCGGTGATATCCATGGACAGTACCAAGATCTTCTGAGGCTATTCGAATACGGAGGCTATCCTCCTTCAGCGAACTATCTCTTCCTCGGCGATTACGTTGATAGAGGCAAGCAAAGTCTTGAAACAATATGTTTACTCTTGGCTTACAAAATCCGGTACCCATCCAAGATATTTCTCTTGAGAGGAAACCATGAAGATGCTAAGATCAACAGGATTTACGGGTTCTATGACGAATGCAAACGGAGGTTTAATGTACGGCTTTGGAAGATATTCACCGATTGCTTCAACTGTTTGCCGGTAGCTGCTCTCATTGACGAGAAGATCCTATGTATGCATGGTGGATTGTCACCGGAATTGGAAAACTTGGGGCAGATTCGGGAGATTCAAAGGCCTACAGAGATTCCAGACAATGGTCTTCTTTGTGATTTACTTTGGTCTGATCCTGATCAGAAGAATGAAGGGTGGACTGATAGCGATCGAGGTATCTCCTGCACGTTTGGAGCCGATGTAGTCGCTGACTTTTTGGATAAGAATGATCTCGATCTCATTTGCAGAGGCCATCAGGTAGTGGAAGATGGGTATGAGTTTTTCGCAAAACGGAGGTTAGTCACAATATTCTCAGCTCCAAACTATGGAGGAGAGTTTGACAATGCCGGTGCATTATTGAGCGTGGATCAATCTCTCGTTTGCTCCTTTGAGATTCTGAAACCGGCTCCAGCTTCTAGCACTAATCCTCTCAAGAAGGTACCGAAAATGGGGAAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03015 ko04022 ko04024 ko04113 ko04114 ko04218 ko04261 ko04270 ko04390 ko04510 ko04611 ko04720 ko04728 ko04750 ko04810 ko04910 ko04921 ko04931 ko05031 ko05034 ko05168 ko05205 map03015 map04022 map04024 map04113 map04114 map04218 map04261 map04270 map04390 map04510 map04611 map04720 map04728 map04750 map04810 map04910 map04921 map04931 map05031 map05034 map05168 map05205

Pfam Domains

Protein Families

Metallophos STPPase_N

Protein Analysis

318

Amino Acids

36.0

Weight (kDa)

5.29

Isoelectric Point (pI)

43.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STPPase_N	PF16891	14 - 57	1e-19	Serine-threonine protein phosphatase N-terminal domain
Metallophos	PF00149	60 - 252	8.2e-50	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0005223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05580 AT3G05580 AT5G27840 AT5G27840 AT5G27840 AT5G27840
fragaria_vesca	FvH4_6g06810 FvH4_6g06810
malus_domestica	MD04G1083500.v1.1 MD04G1198300.v1.1 MD12G1210900.v1.1
prunus_persica	Prupe.6G318800_v2.0.a1 Prupe.6G318800_v2.0.a1 Prupe.6G318800_v2.0.a1 Prupe.6G318800_v2.0.a1 Prupe.6G318800_v2.0.a1
pyrus_communis	pycom04g17540 pycom12g19800
rosa_chinensis	RchiOBHm_Chr3g0456301
rosa_laevigata	RLG00000025314
rosa_multiflora	Rmu_sc0002607.1_g000030
rosa_roxburghii	Rroxscaffold_6G00422880
rosa_rugosa	Rorug03G0012600 Rorug03G0012600
rosa_samantha	Rh3AG072500 Rh3BG074500 Rh3CG074100 Rh3DG076000
rosa_wichuraiana	Rw3G006200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	53
Acc65I	GGTACC	2 cut(s)	345, 934
AccB1I	GGYRCC	2 cut(s)	345, 934
AccB7I	CCANNNNNTGG	2 cut(s)	599, 821
AciI	CCGC	1 cut(s)	192
AclWI	GGATC	4 cut(s)	103, 505, 623, 870
AcuI	CTGAAG	1 cut(s)	240
AfaI	GTAC	4 cut(s)	212, 347, 444, 936
AfiI	CCNNNNNNNGG	3 cut(s)	599, 821, 944
AgsI	TTSAA	3 cut(s)	311, 475, 575
AluBI	AGCT	5 cut(s)	94, 169, 491, 812, 908
AluI	AGCT	5 cut(s)	94, 169, 491, 812, 908
AlwI	GGATC	4 cut(s)	103, 505, 623, 870
Ama87I	CYCGRG	1 cut(s)	164
AoxI	GGCC	2 cut(s)	578, 745
ApeKI	GCWGC	1 cut(s)	491
Asp700I	GAANNNNTTC	1 cut(s)	458
Asp718I	GGTACC	2 cut(s)	345, 934
AsuHPI	GGTGA	3 cut(s)	206, 454, 528
AsuII	TTCGAA	1 cut(s)	234
AvaI	CYCGRG	1 cut(s)	164
BanI	GGYRCC	2 cut(s)	345, 934
BbsI	GAAGAC	1 cut(s)	596
BbvI	GCAGC	1 cut(s)	478
BccI	CCATC	5 cut(s)	19, 25, 358, 756, 758
BceAI	ACGGC	1 cut(s)	461
BcgI	CGANNNNNNTGC	2 cut(s)	155, 189
BclI	TGATCA	1 cut(s)	634
BfaI	CTAG	1 cut(s)	912
BfmI	CTRYAG	1 cut(s)	582
BglII	AGATCT	1 cut(s)	217
BisI	GCNGC	1 cut(s)	492
BlsI	GCNGC	1 cut(s)	493
BmeT110I	CYCGRG	1 cut(s)	164
BmiI	GGNNCC	4 cut(s)	347, 691, 903, 936
BmsI	GCATC	2 cut(s)	195, 376
BoxI	GACNNNNGTC	1 cut(s)	600
BpiI	GAAGAC	1 cut(s)	596
BpmI	CTGGAG	1 cut(s)	888
Bpu14I	TTCGAA	1 cut(s)	234
BpuEI	CTTGAG	2 cut(s)	388, 911
BsaBI	GATNNNNATC	3 cut(s)	633, 663, 729
BsaJI	CCNNGG	2 cut(s)	202, 274
BsaWI	WCCGGW	2 cut(s)	342, 538
BsaXI	ACNNNNNCTCC	2 cut(s)	681, 711
Bsc4I	CCNNNNNNNGG	3 cut(s)	599, 821, 944
Bse118I	RCCGGY	3 cut(s)	484, 842, 898
Bse8I	GATNNNNATC	3 cut(s)	633, 663, 729
BseDI	CCNNGG	2 cut(s)	202, 274
BseGI	GGATG	3 cut(s)	27, 49, 350
BseJI	GATNNNNATC	3 cut(s)	633, 663, 729
BseLI	CCNNNNNNNGG	3 cut(s)	599, 821, 944
BseMII	CTCAG	3 cut(s)	164, 215, 822
BseRI	GAGGAG	1 cut(s)	840
BseXI	GCAGC	1 cut(s)	478
BsgI	GTGCAG	1 cut(s)	664
Bsh1285I	CGRYCG	1 cut(s)	667
BshFI	GGCC	2 cut(s)	580, 747
BshNI	GGYRCC	2 cut(s)	345, 934
BsiEI	CGRYCG	1 cut(s)	667
BsiHKCI	CYCGRG	1 cut(s)	164
BsiSI	CCGG	5 cut(s)	343, 485, 539, 843, 899
BslI	CCNNNNNNNGG	3 cut(s)	599, 821, 944
BsmI	GAATGC	1 cut(s)	428
BsnI	GGCC	2 cut(s)	580, 747
BsoBI	CYCGRG	1 cut(s)	164
Bsp119I	TTCGAA	1 cut(s)	234
Bsp19I	CCATGG	1 cut(s)	202
BspACI	CCGC	1 cut(s)	192
BspANI	GGCC	2 cut(s)	580, 747
BspCNI	CTCAG	3 cut(s)	163, 216, 821
BspLI	GGNNCC	4 cut(s)	347, 691, 903, 936
BspPI	GGATC	4 cut(s)	103, 505, 623, 870
BspT104I	TTCGAA	1 cut(s)	234
BspT107I	GGYRCC	2 cut(s)	345, 934
BsrFI	RCCGGY	3 cut(s)	484, 842, 898
BssAI	RCCGGY	3 cut(s)	484, 842, 898
BssECI	CCNNGG	2 cut(s)	202, 274
BssT1I	CCWWGG	1 cut(s)	202
Bst4CI	ACNGT	2 cut(s)	210, 479
Bst6I	CTCTTC	1 cut(s)	275
BstBI	TTCGAA	1 cut(s)	234
BstC8I	GCNNGC	1 cut(s)	299
BstDEI	CTNAG	4 cut(s)	150, 224, 390, 808
BstDSI	CCRYGG	1 cut(s)	202
BstF5I	GGATG	3 cut(s)	27, 49, 350
BstMCI	CGRYCG	1 cut(s)	667
BstPAI	GACNNNNGTC	1 cut(s)	600
BstSFI	CTRYAG	1 cut(s)	582
BstV1I	GCAGC	1 cut(s)	478
BstV2I	GAAGAC	1 cut(s)	596
BstX2I	RGATCY	3 cut(s)	108, 217, 510
BstYI	RGATCY	3 cut(s)	108, 217, 510
BsuRI	GGCC	2 cut(s)	580, 747
BtgI	CCRYGG	1 cut(s)	202
BtsCI	GGATG	3 cut(s)	27, 49, 350
Cac8I	GCNNGC	1 cut(s)	299
Cfr10I	RCCGGY	3 cut(s)	484, 842, 898
Csp6I	GTAC	4 cut(s)	211, 346, 443, 935
CviAII	CATG	4 cut(s)	173, 203, 380, 524
CviQI	GTAC	4 cut(s)	211, 346, 443, 935
DdeI	CTNAG	4 cut(s)	150, 224, 390, 808
Eam1104I	CTCTTC	1 cut(s)	275
EarI	CTCTTC	1 cut(s)	275
Eco130I	CCWWGG	1 cut(s)	202
Eco147I	AGGCCT	1 cut(s)	580
Eco32I	GATATC	1 cut(s)	199
Eco57I	CTGAAG	1 cut(s)	240
Eco88I	CYCGRG	1 cut(s)	164
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	1 cut(s)	202
EcoT22I	ATGCAT	1 cut(s)	525
ErhI	CCWWGG	1 cut(s)	202
FaeI	CATG	4 cut(s)	176, 206, 383, 527
FatI	CATG	4 cut(s)	172, 202, 379, 523
FbaI	TGATCA	1 cut(s)	634
Fnu4HI	GCNGC	1 cut(s)	492
FokI	GGATG	3 cut(s)	34, 56, 337
Fsp4HI	GCNGC	1 cut(s)	492
FspBI	CTAG	1 cut(s)	912
GluI	GCNGC	1 cut(s)	492
GsuI	CTGGAG	1 cut(s)	888
HaeIII	GGCC	2 cut(s)	580, 747
HapII	CCGG	5 cut(s)	343, 485, 539, 843, 899
Hin1II	CATG	4 cut(s)	176, 206, 383, 527
HincII	GTYRAC	2 cut(s)	116, 127
HindII	GTYRAC	2 cut(s)	116, 127
HinfI	GANTC	4 cut(s)	562, 571, 589, 889
HpaI	GTTAAC	1 cut(s)	127
HpaII	CCGG	5 cut(s)	343, 485, 539, 843, 899
HphI	GGTGA	3 cut(s)	206, 454, 528
Hpy166II	GTNNAC	5 cut(s)	83, 116, 127, 323, 654
Hpy188I	TCNGA	5 cut(s)	100, 225, 628, 639, 894
Hpy8I	GTNNAC	5 cut(s)	83, 116, 127, 323, 654
HpyAV	CCTTC	5 cut(s)	11, 62, 264, 641, 925
HpyCH4III	ACNGT	2 cut(s)	210, 479
HpyCH4IV	ACGT	2 cut(s)	285, 683
HpyCH4V	TGCA	5 cut(s)	426, 523, 681, 741, 848
HpyF3I	CTNAG	4 cut(s)	150, 224, 390, 808
HpySE526I	ACGT	2 cut(s)	285, 683
Hsp92II	CATG	4 cut(s)	176, 206, 383, 527
KpnI	GGTACC	2 cut(s)	349, 938
Ksp22I	TGATCA	1 cut(s)	634
KspAI	GTTAAC	1 cut(s)	127
LmnI	GCTCC	4 cut(s)	689, 817, 884, 907
Lsp1109I	GCAGC	1 cut(s)	478
LweI	GCATC	2 cut(s)	195, 376
MaeI	CTAG	1 cut(s)	912
MaeII	ACGT	2 cut(s)	285, 683
MaeIII	GTNAC	2 cut(s)	534, 796
MflI	RGATCY	3 cut(s)	108, 217, 510
MluCI	AATT	1 cut(s)	542
MmeI	TCCRAC	1 cut(s)	45
Mph1103I	ATGCAT	1 cut(s)	525
MroXI	GAANNNNTTC	1 cut(s)	458
MseI	TTAA	2 cut(s)	126, 438
MslI	CAYNNNNRTG	1 cut(s)	384
MspI	CCGG	5 cut(s)	343, 485, 539, 843, 899
Mva1269I	GAATGC	1 cut(s)	428
NcoI	CCATGG	1 cut(s)	202
NlaIII	CATG	4 cut(s)	176, 206, 383, 527
NlaIV	GGNNCC	4 cut(s)	347, 691, 903, 936
NmeAIII	GCCGAG	1 cut(s)	255
NmuCI	GTSAC	2 cut(s)	534, 796
NsiI	ATGCAT	1 cut(s)	525
NspV	TTCGAA	1 cut(s)	234
PaeR7I	CTCGAG	1 cut(s)	164
PceI	AGGCCT	1 cut(s)	580
PcsI	WCGNNNNNNNCGW	1 cut(s)	282
PctI	GAATGC	1 cut(s)	428
PdmI	GAANNNNTTC	1 cut(s)	458
PfeI	GAWTC	4 cut(s)	562, 571, 589, 889
PflMI	CCANNNNNTGG	2 cut(s)	599, 821
PkrI	GCNGC	1 cut(s)	493
Ple19I	CGATCG	1 cut(s)	667
PshAI	GACNNNNGTC	1 cut(s)	600
PsiI	TTATAA	1 cut(s)	53
PspN4I	GGNNCC	4 cut(s)	347, 691, 903, 936
PsuI	RGATCY	3 cut(s)	108, 217, 510
PvuI	CGATCG	1 cut(s)	667
RsaI	GTAC	4 cut(s)	212, 347, 444, 936
RsaNI	GTAC	4 cut(s)	211, 346, 443, 935
RseI	CAYNNNNRTG	1 cut(s)	384
SaqAI	TTAA	2 cut(s)	126, 438
SatI	GCNGC	1 cut(s)	492
SfaNI	GCATC	2 cut(s)	195, 376
SfcI	CTRYAG	1 cut(s)	582
Sfr274I	CTCGAG	1 cut(s)	164
SfuI	TTCGAA	1 cut(s)	234
SlaI	CTCGAG	1 cut(s)	164
SmiMI	CAYNNNNRTG	1 cut(s)	384
SmlI	CTYRAG	3 cut(s)	164, 367, 926
SmoI	CTYRAG	3 cut(s)	164, 367, 926
Sse9I	AATT	1 cut(s)	542
SseBI	AGGCCT	1 cut(s)	580
SsiI	CCGC	1 cut(s)	192
SspI	AATATT	1 cut(s)	804
SspMI	CTAG	1 cut(s)	912
StuI	AGGCCT	1 cut(s)	580
StyI	CCWWGG	1 cut(s)	202
TaaI	ACNGT	2 cut(s)	210, 479
TaiI	ACGT	2 cut(s)	288, 686
TaqI	TCGA	5 cut(s)	105, 165, 234, 667, 729
TasI	AATT	1 cut(s)	542
TfiI	GAWTC	4 cut(s)	562, 571, 589, 889
Tru1I	TTAA	2 cut(s)	126, 438
Tru9I	TTAA	2 cut(s)	126, 438
TseFI	GTSAC	2 cut(s)	534, 796
TseI	GCWGC	1 cut(s)	491
Tsp45I	GTSAC	2 cut(s)	534, 796
TspDTI	ATGAA	3 cut(s)	161, 396, 660
TspGWI	ACGGA	4 cut(s)	101, 255, 445, 802
Van91I	CCANNNNNTGG	2 cut(s)	599, 821
XhoI	CTCGAG	1 cut(s)	164
XmnI	GAANNNNTTC	1 cut(s)	458
XspI	CTAG	1 cut(s)	912
Zsp2I	ATGCAT	1 cut(s)	525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.