pycom04g17540

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
19885621 .. 19890561
4941 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g17540.3

Sequence Viewer

Length: 1512 bp
ATGATGATGATGACAATGGAGGGGATGATGGATAAGGGTGTGTTGGATGATATAATCAGGAGGCTTTTGGAAGGCAAAGGAGGGAAGCAAGTGCAGCTTTCGGAGGCGGAGATCCGTCAACTTTGCGTCAACGCCCGCCAAATCTTCCTCTCTCAGCCTAATCTTCTCGAGGTCCGAGCTCCGGTTCGAATTTGCGGTGATATACATGGACAATACCAAGACCTACTAAGGGTGTTCGAATATGGTGGTTATCCTCCTTCTGCAAATTACCTGTTTCTAGGAGACTATGTGGATCGAGGCAAGCAAAGTTTGGAGACAATCTGTTTGCTTCTGGCCTACAAAATAAGATACCCTGACAAAATTTTCCTTTTGAGGGGAAACCATGAAGATGCAAAGATTAATCGAATATATGGGTTCTATGACGAGTGTAAAAGGAGGTTTAATGTAAGGCTTTGGAAAATATTTACCGAGTGCTTTAATTGTTTGCCTGTGGCTGCACTTATTGATGGGAAGATACTTTGTATGCACGGGGGTCTCTCGCCAGAGTTGGAAAACTTGGACCAAATAAAAGAAATTTCACGGCCAACTGACATTCCAGATAATGGTCTGTTATGCGATCTGCTTTGGTCTGATCCTGATGCTAGGGTTGAGGGTTGGGCGGAGAGTGATCGAGGTGTTTCCTGTACTTTTGGAGCTGATAGAGTTAGTGATTTTTTAGATAAGAATGAGCTTGATCTCATTTGCCGGGGTCATCAGGTGGTGGAGGATGGCTATGAGTTTTTCGCAAAACGAAGATTAGTCACAATATTTTCAGCTCCGAACTATGGCGGGGAGTTTGATAATGCCGGTGCTCTATTGAGTGTTGATGAAGCTCTGGTGTGTTCCTTTGAGATTCTGAAACCAGTTGATCATAAAGCATCCCCGAGCGGTTCAAAGTTAAATCTTAAAAAGGGGATCGATCTCGTGGCAGGAGGTAAGAGCAAGAAGACGAAGCGCACAGCGCCCAAGTCCGATGATATCTATCTCAAGCTTCTCGTCAAGCTGTACCGTTTTCTTGTCCGGAGGACTGGAAGCAAGTTCAATGCAGTCATTCTTAAACGTTTGTTCATGAGCAAAGTCAACAAGGCACCACTTTCTCTATCAAGGTTGATTAAGTATATGCAAGGAAAGGACAACAAGATTGCTGTTGTTGTGGGGACTGTCACCGATGACATTAGGGTTTATGAAGTTCCACAAATGAAGGTGACAGCACTGAGGTTCACTGAGACTGCAAGGGCCAGGATTGAGAAGGCAGGAGGAGAGTGCTTGACATTTGATCAGCTTGCTTTGAGAGCACCATTGGGTCAGAACGTGGTTCTCCTCAGAGGTCCTAAGAATTCTCGTGAAGCAGTGAAGCACTTCGGTCCAGCTCCTGGTGTACCACACAGCCACACTAAACCTTACGTGCGGTCCAAGGGAAGGAAGTTTGAGAAGGCTAGAGGAAAGAGGAACAGCAAGGGCTTTAGAGTTTAA

Protein Analysis

504

Amino Acids

56.71

Weight (kDa)

9.39

Isoelectric Point (pI)

40.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1126
AccB7I CCANNNNNTGG 2 cut(s) 602, 1412
AccBSI CCGCTC 1 cut(s) 927
AccIII TCCGGA 1 cut(s) 1059
AciI CCGC 7 cut(s) 107, 136, 195, 659, 828, 927, 1447
AclI AACGTT 1 cut(s) 1099
AclWI GGATC 4 cut(s) 106, 300, 626, 962
AcoI YGGCCR 1 cut(s) 581
AcsI RAATTY 4 cut(s) 189, 360, 573, 1375
AfaI GTAC 3 cut(s) 685, 1046, 1419
AfiI CCNNNNNNNGG 7 cut(s) 181, 229, 373, 602, 824, 1412, 1458
AgsI TTSAA 2 cut(s) 933, 1081
AjnI CCWGG 2 cut(s) 1277, 1411
Alw21I GWGCWC 3 cut(s) 181, 853, 1336
Alw26I GTCTC 4 cut(s) 276, 308, 539, 1259
AlwI GGATC 4 cut(s) 106, 300, 626, 962
AlwNI CAGNNNCTG 1 cut(s) 1412
Ama87I CYCGRG 2 cut(s) 167, 922
Aor13HI TCCGGA 1 cut(s) 1059
AoxI GGCC 3 cut(s) 333, 581, 1275
ApeKI GCWGC 2 cut(s) 94, 494
ApoI RAATTY 4 cut(s) 189, 360, 573, 1375
ArsI GACNNNNNNTTYG 2 cut(s) 307, 339
AseI ATTAAT 1 cut(s) 399
Asp700I GAANNNNTTC 1 cut(s) 1397
AspLEI GCGC 2 cut(s) 996, 1003
AspS9I GGNCC 6 cut(s) 172, 559, 1275, 1367, 1403, 1449
AsuC2I CCSGG 1 cut(s) 746
AsuHPI GGTGA 3 cut(s) 209, 1195, 1255
AsuII TTCGAA 2 cut(s) 187, 237
AvaI CYCGRG 2 cut(s) 167, 922
AvaII GGWCC 5 cut(s) 172, 559, 1367, 1403, 1449
BanI GGYRCC 1 cut(s) 1126
BanII GRGCYC 1 cut(s) 181
BauI CACGAG 2 cut(s) 962, 1380
BbsI GAAGAC 1 cut(s) 992
Bbv12I GWGCWC 3 cut(s) 181, 853, 1336
BbvI GCAGC 2 cut(s) 106, 481
BccI CCATC 3 cut(s) 22, 500, 761
BceAI ACGGC 1 cut(s) 596
BciT130I CCWGG 2 cut(s) 1279, 1413
BclI TGATCA 2 cut(s) 907, 1315
BcnI CCSGG 1 cut(s) 746
BcoDI GTCTC 4 cut(s) 276, 308, 539, 1259
BfaI CTAG 3 cut(s) 278, 642, 1476
BfoI RGCGCY 1 cut(s) 1004
BisI GCNGC 2 cut(s) 95, 495
BlsI GCNGC 2 cut(s) 96, 496
Bme1390I CCNGG 3 cut(s) 746, 1279, 1413
Bme18I GGWCC 5 cut(s) 172, 559, 1367, 1403, 1449
BmeT110I CYCGRG 2 cut(s) 167, 922
BmgT120I GGNCC 6 cut(s) 172, 559, 1275, 1367, 1403, 1449
BmiI GGNNCC 1 cut(s) 1128
BmrFI CCNGG 3 cut(s) 746, 1279, 1413
BmsI GCATC 3 cut(s) 379, 628, 926
BpiI GAAGAC 1 cut(s) 992
Bpu14I TTCGAA 2 cut(s) 187, 237
BpuEI CTTGAG 1 cut(s) 1010
BpuMI CCSGG 1 cut(s) 746
Bsa29I ATCGAT 1 cut(s) 957
BsaAI YACGTR 1 cut(s) 1444
BsaBI GATNNNNATC 1 cut(s) 1020
BsaI GGTCTC 1 cut(s) 539
BsaJI CCNNGG 2 cut(s) 745, 1452
BsaWI WCCGGW 2 cut(s) 181, 1059
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 7 cut(s) 181, 229, 373, 602, 824, 1412, 1458
Bse118I RCCGGY 1 cut(s) 845
Bse1I ACTGG 2 cut(s) 902, 1072
Bse8I GATNNNNATC 1 cut(s) 1020
BseAI TCCGGA 1 cut(s) 1059
BseBI CCWGG 2 cut(s) 1279, 1413
BseCI ATCGAT 1 cut(s) 957
BseDI CCNNGG 2 cut(s) 745, 1452
BseGI GGATG 4 cut(s) 30, 52, 772, 917
BseJI GATNNNNATC 1 cut(s) 1020
BseLI CCNNNNNNNGG 7 cut(s) 181, 229, 373, 602, 824, 1412, 1458
BseMII CTCAG 4 cut(s) 167, 1244, 1254, 1375
BseNI ACTGG 2 cut(s) 902, 1072
BseRI GAGGAG 2 cut(s) 1311, 1349
BseXI GCAGC 2 cut(s) 106, 481
BsgI GTGCAG 2 cut(s) 113, 480
BshFI GGCC 3 cut(s) 335, 583, 1277
BshNI GGYRCC 1 cut(s) 1126
BshVI ATCGAT 1 cut(s) 957
BsiHKAI GWGCWC 3 cut(s) 181, 853, 1336
BsiHKCI CYCGRG 2 cut(s) 167, 922
BsiSI CCGG 4 cut(s) 182, 745, 846, 1060
BslFI GGGAC 1 cut(s) 1210
BslI CCNNNNNNNGG 7 cut(s) 181, 229, 373, 602, 824, 1412, 1458
BsmAI GTCTC 4 cut(s) 276, 308, 539, 1259
BsmFI GGGAC 1 cut(s) 1210
BsnI GGCC 3 cut(s) 335, 583, 1277
Bso31I GGTCTC 1 cut(s) 539
BsoBI CYCGRG 2 cut(s) 167, 922
Bsp119I TTCGAA 2 cut(s) 187, 237
Bsp1286I GDGCHC 3 cut(s) 181, 853, 1336
Bsp13I TCCGGA 1 cut(s) 1059
BspACI CCGC 7 cut(s) 107, 136, 195, 659, 828, 927, 1447
BspANI GGCC 3 cut(s) 335, 583, 1277
BspCNI CTCAG 4 cut(s) 166, 1245, 1255, 1374
BspDI ATCGAT 1 cut(s) 957
BspEI TCCGGA 1 cut(s) 1059
BspHI TCATGA 1 cut(s) 1107
BspLI GGNNCC 1 cut(s) 1128
BspPI GGATC 4 cut(s) 106, 300, 626, 962
BspT104I TTCGAA 2 cut(s) 187, 237
BspT107I GGYRCC 1 cut(s) 1126
BspTNI GGTCTC 1 cut(s) 539
BsrBI CCGCTC 1 cut(s) 927
BsrFI RCCGGY 1 cut(s) 845
BsrI ACTGG 2 cut(s) 902, 1072
BssAI RCCGGY 1 cut(s) 845
BssECI CCNNGG 2 cut(s) 745, 1452
BssSI CACGAG 2 cut(s) 962, 1380
BssT1I CCWWGG 1 cut(s) 1452
Bst2BI CACGAG 2 cut(s) 962, 1380
Bst2UI CCWGG 2 cut(s) 1279, 1413
Bst4CI ACNGT 2 cut(s) 1049, 1201
BstBAI YACGTR 1 cut(s) 1444
BstBI TTCGAA 2 cut(s) 187, 237
BstC8I GCNNGC 3 cut(s) 136, 302, 1323
BstDEI CTNAG 6 cut(s) 153, 227, 1253, 1263, 1361, 1371
BstF5I GGATG 4 cut(s) 30, 52, 772, 917
BstH2I RGCGCY 1 cut(s) 1004
BstHHI GCGC 2 cut(s) 996, 1003
BstMAI GTCTC 4 cut(s) 276, 308, 539, 1259
BstMWI GCNNNNNNNGC 3 cut(s) 94, 1000, 1331
BstNI CCWGG 2 cut(s) 1279, 1413
BstSCI CCNGG 3 cut(s) 744, 1277, 1411
BstV1I GCAGC 2 cut(s) 106, 481
BstV2I GAAGAC 1 cut(s) 992
BstX2I RGATCY 1 cut(s) 111
BstYI RGATCY 1 cut(s) 111
Bsu15I ATCGAT 1 cut(s) 957
BsuRI GGCC 3 cut(s) 335, 583, 1277
BsuTUI ATCGAT 1 cut(s) 957
BtsCI GGATG 4 cut(s) 30, 52, 772, 917
BtsI GCAGTG 1 cut(s) 1395
BtsIMutI CAGTG 3 cut(s) 1250, 1260, 1395
Cac8I GCNNGC 3 cut(s) 136, 302, 1323
CaiI CAGNNNCTG 1 cut(s) 1412
CciI TCATGA 1 cut(s) 1107
CfoI GCGC 2 cut(s) 996, 1003
Cfr10I RCCGGY 1 cut(s) 845
Cfr13I GGNCC 6 cut(s) 172, 559, 1275, 1367, 1403, 1449
ClaI ATCGAT 1 cut(s) 957
CseI GACGC 1 cut(s) 115
Csp6I GTAC 3 cut(s) 684, 1045, 1418
CviAII CATG 3 cut(s) 206, 383, 1108
CviQI GTAC 3 cut(s) 684, 1045, 1418
DdeI CTNAG 6 cut(s) 153, 227, 1253, 1263, 1361, 1371
EaeI YGGCCR 1 cut(s) 581
EciI GGCGGA 2 cut(s) 122, 674
Ecl136II GAGCTC 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 1452
Eco24I GRGCYC 1 cut(s) 181
Eco31I GGTCTC 1 cut(s) 539
Eco32I GATATC 1 cut(s) 1018
Eco47I GGWCC 5 cut(s) 172, 559, 1367, 1403, 1449
Eco53kI GAGCTC 1 cut(s) 179
Eco88I CYCGRG 2 cut(s) 167, 922
EcoICRI GAGCTC 1 cut(s) 179
EcoO109I RGGNCCY 1 cut(s) 1367
EcoRI GAATTC 1 cut(s) 1375
EcoRII CCWGG 2 cut(s) 1277, 1411
EcoRV GATATC 1 cut(s) 1018
EcoT14I CCWWGG 1 cut(s) 1452
EcoT38I GRGCYC 1 cut(s) 181
ErhI CCWWGG 1 cut(s) 1452
FaeI CATG 3 cut(s) 209, 386, 1111
FalI AAGNNNNNCTT 2 cut(s) 81, 113
FaqI GGGAC 1 cut(s) 1210
FatI CATG 3 cut(s) 205, 382, 1107
FauI CCCGC 2 cut(s) 143, 821
FbaI TGATCA 2 cut(s) 907, 1315
Fnu4HI GCNGC 2 cut(s) 95, 495
FokI GGATG 4 cut(s) 37, 59, 779, 904
FriOI GRGCYC 1 cut(s) 181
Fsp4HI GCNGC 2 cut(s) 95, 495
FspBI CTAG 3 cut(s) 278, 642, 1476
GlaI GCGC 2 cut(s) 995, 1002
GluI GCNGC 2 cut(s) 95, 495
HaeII RGCGCY 1 cut(s) 1004
HaeIII GGCC 3 cut(s) 335, 583, 1277
HapII CCGG 4 cut(s) 182, 745, 846, 1060
HgaI GACGC 1 cut(s) 115
HhaI GCGC 2 cut(s) 996, 1003
Hin1II CATG 3 cut(s) 209, 386, 1111
Hin6I GCGC 2 cut(s) 994, 1001
HinP1I GCGC 2 cut(s) 994, 1001
HincII GTYRAC 3 cut(s) 119, 130, 1120
HindII GTYRAC 3 cut(s) 119, 130, 1120
HindIII AAGCTT 1 cut(s) 1028
HinfI GANTC 1 cut(s) 892
HpaII CCGG 4 cut(s) 182, 745, 846, 1060
HphI GGTGA 3 cut(s) 209, 1195, 1255
Hpy166II GTNNAC 5 cut(s) 119, 130, 1120, 1260, 1418
Hpy188I TCNGA 8 cut(s) 103, 176, 631, 819, 897, 1012, 1347, 1364
Hpy188III TCNNGA 7 cut(s) 58, 167, 596, 635, 1060, 1108, 1382
Hpy8I GTNNAC 5 cut(s) 119, 130, 1120, 1260, 1418
HpyAV CCTTC 6 cut(s) 65, 267, 1234, 1282, 1452, 1465
HpyCH4III ACNGT 2 cut(s) 1049, 1201
HpyCH4IV ACGT 3 cut(s) 1099, 1350, 1443
HpyCH4V TGCA 8 cut(s) 94, 263, 392, 497, 526, 1085, 1162, 1271
HpyF10VI GCNNNNNNNGC 3 cut(s) 94, 1000, 1331
HpyF3I CTNAG 6 cut(s) 153, 227, 1253, 1263, 1361, 1371
HpySE526I ACGT 3 cut(s) 1099, 1350, 1443
Hsp92II CATG 3 cut(s) 209, 386, 1111
HspAI GCGC 2 cut(s) 994, 1001
Kpn2I TCCGGA 1 cut(s) 1059
Ksp22I TGATCA 2 cut(s) 907, 1315
LmnI GCTCC 4 cut(s) 184, 692, 820, 1414
Lsp1109I GCAGC 2 cut(s) 106, 481
LweI GCATC 3 cut(s) 379, 628, 926
MaeI CTAG 3 cut(s) 278, 642, 1476
MaeII ACGT 3 cut(s) 1099, 1350, 1443
MaeIII GTNAC 3 cut(s) 799, 1201, 1243
MbiI CCGCTC 1 cut(s) 927
MboII GAAGA 6 cut(s) 136, 155, 398, 523, 804, 997
MflI RGATCY 1 cut(s) 111
MhlI GDGCHC 3 cut(s) 181, 853, 1336
MluCI AATT 6 cut(s) 189, 265, 360, 478, 573, 1375
MmeI TCCRAC 2 cut(s) 24, 528
MroI TCCGGA 1 cut(s) 1059
MroXI GAANNNNTTC 1 cut(s) 1397
MseI TTAA 8 cut(s) 399, 441, 477, 938, 945, 1095, 1152, 1510
MslI CAYNNNNRTG 1 cut(s) 387
MspI CCGG 4 cut(s) 182, 745, 846, 1060
MspR9I CCNGG 3 cut(s) 746, 1279, 1413
MvaI CCWGG 2 cut(s) 1279, 1413
MwoI GCNNNNNNNGC 3 cut(s) 94, 1000, 1331
NciI CCSGG 1 cut(s) 746
NlaIII CATG 3 cut(s) 209, 386, 1111
NlaIV GGNNCC 1 cut(s) 1128
NmuCI GTSAC 3 cut(s) 799, 1201, 1243
NspV TTCGAA 2 cut(s) 187, 237
PaeR7I CTCGAG 1 cut(s) 167
PagI TCATGA 1 cut(s) 1107
PdmI GAANNNNTTC 1 cut(s) 1397
PfeI GAWTC 1 cut(s) 892
PflMI CCANNNNNTGG 2 cut(s) 602, 1412
PkrI GCNGC 2 cut(s) 96, 496
Ppu21I YACGTR 1 cut(s) 1444
PpuMI RGGWCCY 1 cut(s) 1367
PshBI ATTAAT 1 cut(s) 399
Psp124BI GAGCTC 1 cut(s) 181
Psp1406I AACGTT 1 cut(s) 1099
Psp5II RGGWCCY 1 cut(s) 1367
Psp6I CCWGG 2 cut(s) 1277, 1411
PspGI CCWGG 2 cut(s) 1277, 1411
PspN4I GGNNCC 1 cut(s) 1128
PspPI GGNCC 6 cut(s) 172, 559, 1275, 1367, 1403, 1449
PspPPI RGGWCCY 1 cut(s) 1367
PstNI CAGNNNCTG 1 cut(s) 1412
PsuI RGATCY 1 cut(s) 111
RsaI GTAC 3 cut(s) 685, 1046, 1419
RsaNI GTAC 3 cut(s) 684, 1045, 1418
RseI CAYNNNNRTG 1 cut(s) 387
SacI GAGCTC 1 cut(s) 181
SaqAI TTAA 8 cut(s) 399, 441, 477, 938, 945, 1095, 1152, 1510
SatI GCNGC 2 cut(s) 95, 495
Sau96I GGNCC 6 cut(s) 172, 559, 1275, 1367, 1403, 1449
ScrFI CCNGG 3 cut(s) 746, 1279, 1413
SduI GDGCHC 3 cut(s) 181, 853, 1336
SfaNI GCATC 3 cut(s) 379, 628, 926
Sfr274I CTCGAG 1 cut(s) 167
SfuI TTCGAA 2 cut(s) 187, 237
SinI GGWCC 5 cut(s) 172, 559, 1367, 1403, 1449
SlaI CTCGAG 1 cut(s) 167
SmiMI CAYNNNNRTG 1 cut(s) 387
SmlI CTYRAG 2 cut(s) 167, 1025
SmoI CTYRAG 2 cut(s) 167, 1025
Sse9I AATT 6 cut(s) 189, 265, 360, 478, 573, 1375
SsiI CCGC 7 cut(s) 107, 136, 195, 659, 828, 927, 1447
SspI AATATT 2 cut(s) 462, 807
SspMI CTAG 3 cut(s) 278, 642, 1476
SstI GAGCTC 1 cut(s) 181
StyD4I CCNGG 3 cut(s) 744, 1277, 1411
StyI CCWWGG 1 cut(s) 1452
TaaI ACNGT 2 cut(s) 1049, 1201
TaiI ACGT 3 cut(s) 1102, 1353, 1446
TaqI TCGA 7 cut(s) 168, 187, 237, 295, 403, 670, 957
TaqII GACCGA 1 cut(s) 1391
TasI AATT 6 cut(s) 189, 265, 360, 478, 573, 1375
TatI WGTACW 1 cut(s) 683
TfiI GAWTC 1 cut(s) 892
Tru1I TTAA 8 cut(s) 399, 441, 477, 938, 945, 1095, 1152, 1510
Tru9I TTAA 8 cut(s) 399, 441, 477, 938, 945, 1095, 1152, 1510
TscAI CASTG 3 cut(s) 1257, 1267, 1395
TseFI GTSAC 3 cut(s) 799, 1201, 1243
TseI GCWGC 2 cut(s) 94, 494
Tsp45I GTSAC 3 cut(s) 799, 1201, 1243
TspDTI ATGAA 5 cut(s) 399, 882, 1096, 1239, 1253
TspGWI ACGGA 1 cut(s) 104
TspRI CASTG 3 cut(s) 1257, 1267, 1395
Van91I CCANNNNNTGG 2 cut(s) 602, 1412
VpaK11BI GGWCC 5 cut(s) 172, 559, 1367, 1403, 1449
VspI ATTAAT 1 cut(s) 399
XapI RAATTY 4 cut(s) 189, 360, 573, 1375
XhoI CTCGAG 1 cut(s) 167
XmnI GAANNNNTTC 1 cut(s) 1397
XspI CTAG 3 cut(s) 278, 642, 1476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.