AT3G07565

Protein of unknown function (DUF3755)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0007327
Physical Location & Seq
Forward (+)
2413623 .. 2416284
2662 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07565.4

Sequence Viewer

Length: 777 bp
ATGGCGGCGAGCGCGAACCCGTCGGGGAACAATCAGGAAGGTTCGTCGGCGACGCAGAAGGTATCGTCTTCTTCAGCGGCGGCGGCGAATGGCGCTGCTGTGAATTCCGTCGATAATGGTGGAAATACAGGCGCGGCGGCGGATAATTCACAGACGATTGGCGCGTTGAGGCATAATCCAGGGATCTCTACCGATTGGACTCTTGAGGAACAATCTCTATTGGAAGATTTGCTTGTCAAGTACGCGACAGAACCGTCGGTTTTTCGATATGCGAAGATTGCTATGAAAATGAAAGATAAGACTGTTCGAGATGTTGCCCTGCGCTGTAGATGGATGACTAAAAAGGAAAACGGAAAGCGTAGGAAAGAAGATCATTCCTCGAGGAAAAGCAAAGATAAGAAAGAAAAAGCTACAGATTCTTCAGCCAAGTCCTCATCTCATTTGAATGTTCATCCTAATGGTCCTTCTTATGCTCCGCCTATGATGCCTATCGATACTGATGATGGTATTTCATATAAAGCTATTGGTGGTGTGAGTGGAGATCTTCTCGAGCAAAATGCTCAAATGTTCAATCAACTTTCAACAAATTTCTCAGCTTTCCAGCTACATGAGAATGTCAATATCTTGTGCAAAGCTCGAGACAATATCCTTGCAATCTTGAACGACTTGAATGACATGCCAGAAGTTATGAAGCAGATGCCACCTCTTCCGGTGAAGTTGAATGAGGAGCTGGCAAATTCGATCCTCCCTCGCCCATCCCATCAAAGGAAGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3755

Protein Analysis

258

Amino Acids

27.99

Weight (kDa)

8.74

Isoelectric Point (pI)

51.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3755 PF12579 212 - 242 3e-15 Protein of unknown function (DUF3755)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 253
AbsI CCTCGAGG 1 cut(s) 379
AccII CGCG 4 cut(s) 14, 134, 164, 245
AciI CCGC 8 cut(s) 5, 77, 80, 83, 134, 137, 140, 476
AclWI GGATC 2 cut(s) 191, 736
AcsI RAATTY 3 cut(s) 103, 586, 736
AcuI CTGAAG 2 cut(s) 57, 405
AfaI GTAC 1 cut(s) 242
AfiI CCNNNNNNNGG 1 cut(s) 765
AgsI TTSAA 6 cut(s) 445, 571, 582, 661, 670, 721
AjnI CCWGG 1 cut(s) 178
AluBI AGCT 6 cut(s) 410, 521, 596, 604, 635, 730
AluI AGCT 6 cut(s) 410, 521, 596, 604, 635, 730
Alw26I GTCTC 1 cut(s) 633
AlwI GGATC 2 cut(s) 191, 736
Ama87I CYCGRG 3 cut(s) 379, 548, 636
ApeKI GCWGC 1 cut(s) 95
ApoI RAATTY 3 cut(s) 103, 586, 736
AspLEI GCGC 5 cut(s) 14, 95, 134, 164, 324
AspS9I GGNCC 1 cut(s) 461
AsuHPI GGTGA 1 cut(s) 724
AvaI CYCGRG 3 cut(s) 379, 548, 636
AvaII GGWCC 1 cut(s) 461
BbsI GAAGAC 1 cut(s) 60
BbvI GCAGC 1 cut(s) 82
BccI CCATC 4 cut(s) 324, 497, 763, 768
BcgI CGANNNNNNTGC 2 cut(s) 539, 573
BciT130I CCWGG 1 cut(s) 180
BcoDI GTCTC 1 cut(s) 633
BfmI CTRYAG 2 cut(s) 325, 411
BfoI RGCGCY 1 cut(s) 96
BglII AGATCT 1 cut(s) 541
BisI GCNGC 7 cut(s) 6, 78, 81, 84, 96, 135, 138
BlsI GCNGC 7 cut(s) 7, 79, 82, 85, 97, 136, 139
Bme1390I CCNGG 1 cut(s) 180
Bme18I GGWCC 1 cut(s) 461
BmeT110I CYCGRG 3 cut(s) 379, 548, 636
BmgT120I GGNCC 1 cut(s) 461
BmrFI CCNGG 1 cut(s) 180
BmsI GCATC 2 cut(s) 474, 687
BpiI GAAGAC 1 cut(s) 60
BplI GAGNNNNNCTC 2 cut(s) 531, 563
BpuEI CTTGAG 1 cut(s) 224
Bsa29I ATCGAT 1 cut(s) 492
BsaBI GATNNNNATC 1 cut(s) 488
BsaJI CCNNGG 1 cut(s) 179
BsaWI WCCGGW 1 cut(s) 709
Bsc4I CCNNNNNNNGG 1 cut(s) 765
Bse8I GATNNNNATC 1 cut(s) 488
BseBI CCWGG 1 cut(s) 180
BseCI ATCGAT 1 cut(s) 492
BseDI CCNNGG 1 cut(s) 179
BseGI GGATG 3 cut(s) 339, 451, 755
BseJI GATNNNNATC 1 cut(s) 488
BseLI CCNNNNNNNGG 1 cut(s) 765
BseMII CTCAG 1 cut(s) 606
BseRI GAGGAG 1 cut(s) 740
BseXI GCAGC 1 cut(s) 82
Bsh1236I CGCG 4 cut(s) 14, 134, 164, 245
BshVI ATCGAT 1 cut(s) 492
BsiHKCI CYCGRG 3 cut(s) 379, 548, 636
BsiSI CCGG 1 cut(s) 710
BslI CCNNNNNNNGG 1 cut(s) 765
BsmAI GTCTC 1 cut(s) 633
BsoBI CYCGRG 3 cut(s) 379, 548, 636
Bsp143I GATC 4 cut(s) 183, 370, 541, 741
BspACI CCGC 8 cut(s) 5, 77, 80, 83, 134, 137, 140, 476
BspCNI CTCAG 1 cut(s) 605
BspDI ATCGAT 1 cut(s) 492
BspFNI CGCG 4 cut(s) 14, 134, 164, 245
BspHI TCATGA 1 cut(s) 773
BspPI GGATC 2 cut(s) 191, 736
BssECI CCNNGG 1 cut(s) 179
BssMI GATC 4 cut(s) 183, 370, 541, 741
Bst2UI CCWGG 1 cut(s) 180
Bst4CI ACNGT 2 cut(s) 255, 304
Bst6I CTCTTC 1 cut(s) 711
BstC8I GCNNGC 2 cut(s) 10, 732
BstDEI CTNAG 1 cut(s) 592
BstF5I GGATG 3 cut(s) 339, 451, 755
BstFNI CGCG 4 cut(s) 14, 134, 164, 245
BstH2I RGCGCY 1 cut(s) 96
BstHHI GCGC 5 cut(s) 14, 95, 134, 164, 324
BstKTI GATC 4 cut(s) 186, 373, 544, 744
BstMAI GTCTC 1 cut(s) 633
BstMBI GATC 4 cut(s) 183, 370, 541, 741
BstMWI GCNNNNNNNGC 5 cut(s) 11, 83, 92, 278, 484
BstNI CCWGG 1 cut(s) 180
BstNSI RCATGY 1 cut(s) 679
BstSCI CCNGG 1 cut(s) 178
BstSFI CTRYAG 2 cut(s) 325, 411
BstUI CGCG 4 cut(s) 14, 134, 164, 245
BstV1I GCAGC 1 cut(s) 82
BstV2I GAAGAC 1 cut(s) 60
BstX2I RGATCY 2 cut(s) 183, 541
BstYI RGATCY 2 cut(s) 183, 541
Bsu15I ATCGAT 1 cut(s) 492
BsuTUI ATCGAT 1 cut(s) 492
BtsCI GGATG 3 cut(s) 339, 451, 755
Cac8I GCNNGC 2 cut(s) 10, 732
CciI TCATGA 1 cut(s) 773
CfoI GCGC 5 cut(s) 14, 95, 134, 164, 324
Cfr13I GGNCC 1 cut(s) 461
ClaI ATCGAT 1 cut(s) 492
CseI GACGC 1 cut(s) 61
Csp6I GTAC 1 cut(s) 241
CviAII CATG 3 cut(s) 608, 676, 774
CviJI RGCY 7 cut(s) 410, 425, 521, 596, 604, 635, 730
CviKI_1 RGCY 7 cut(s) 410, 425, 521, 596, 604, 635, 730
CviQI GTAC 1 cut(s) 241
DdeI CTNAG 1 cut(s) 592
DpnI GATC 4 cut(s) 185, 372, 543, 743
DpnII GATC 4 cut(s) 183, 370, 541, 741
DrdI GACNNNNNNGTC 1 cut(s) 253
DseDI GACNNNNNNGTC 1 cut(s) 253
Eam1104I CTCTTC 1 cut(s) 711
EarI CTCTTC 1 cut(s) 711
EciI GGCGGA 2 cut(s) 155, 465
Eco47I GGWCC 1 cut(s) 461
Eco57I CTGAAG 2 cut(s) 57, 405
Eco88I CYCGRG 3 cut(s) 379, 548, 636
EcoRI GAATTC 1 cut(s) 103
EcoRII CCWGG 1 cut(s) 178
FaeI CATG 3 cut(s) 611, 679, 777
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FatI CATG 3 cut(s) 607, 675, 773
Fnu4HI GCNGC 7 cut(s) 6, 78, 81, 84, 96, 135, 138
FokI GGATG 3 cut(s) 346, 438, 742
Fsp4HI GCNGC 7 cut(s) 6, 78, 81, 84, 96, 135, 138
GlaI GCGC 5 cut(s) 13, 94, 133, 163, 323
GluI GCNGC 7 cut(s) 6, 78, 81, 84, 96, 135, 138
HaeII RGCGCY 1 cut(s) 96
HapII CCGG 1 cut(s) 710
HgaI GACGC 1 cut(s) 61
HhaI GCGC 5 cut(s) 14, 95, 134, 164, 324
Hin1II CATG 3 cut(s) 611, 679, 777
Hin6I GCGC 5 cut(s) 12, 93, 132, 162, 322
HinP1I GCGC 5 cut(s) 12, 93, 132, 162, 322
HinfI GANTC 2 cut(s) 199, 416
HpaII CCGG 1 cut(s) 710
HphI GGTGA 1 cut(s) 724
Hpy188III TCNNGA 7 cut(s) 35, 203, 308, 548, 638, 658, 774
Hpy99I CGWCG 5 cut(s) 25, 49, 55, 113, 259
HpyAV CCTTC 3 cut(s) 32, 52, 474
HpyCH4III ACNGT 2 cut(s) 255, 304
HpyCH4V TGCA 2 cut(s) 630, 653
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 83, 92, 278, 484
HpyF3I CTNAG 1 cut(s) 592
Hsp92II CATG 3 cut(s) 611, 679, 777
HspAI GCGC 5 cut(s) 12, 93, 132, 162, 322
Kzo9I GATC 4 cut(s) 183, 370, 541, 741
LmnI GCTCC 2 cut(s) 478, 727
LpnPI CCDG 9 cut(s) 20, 114, 165, 192, 332, 614, 693, 716, 723
Lsp1109I GCAGC 1 cut(s) 82
LweI GCATC 2 cut(s) 474, 687
MalI GATC 4 cut(s) 185, 372, 543, 743
MboI GATC 4 cut(s) 183, 370, 541, 741
MboII GAAGA 8 cut(s) 60, 63, 236, 286, 380, 411, 536, 698
MflI RGATCY 2 cut(s) 183, 541
MluCI AATT 4 cut(s) 103, 145, 586, 736
MlyI GAGTC 1 cut(s) 193
MnlI CCTC 9 cut(s) 162, 199, 375, 388, 442, 714, 718, 755, 759
MslI CAYNNNNRTG 3 cut(s) 444, 456, 612
MspA1I CMGCKG 1 cut(s) 77
MspI CCGG 1 cut(s) 710
MspR9I CCNGG 1 cut(s) 180
MvaI CCWGG 1 cut(s) 180
MvnI CGCG 4 cut(s) 14, 134, 164, 245
MwoI GCNNNNNNNGC 5 cut(s) 11, 83, 92, 278, 484
NdeII GATC 4 cut(s) 183, 370, 541, 741
NlaIII CATG 3 cut(s) 611, 679, 777
NspI RCATGY 1 cut(s) 679
PaeR7I CTCGAG 3 cut(s) 379, 548, 636
PagI TCATGA 1 cut(s) 773
PcsI WCGNNNNNNNCGW 1 cut(s) 161
PfeI GAWTC 1 cut(s) 416
PkrI GCNGC 7 cut(s) 7, 79, 82, 85, 97, 136, 139
PleI GAGTC 1 cut(s) 193
PpsI GAGTC 1 cut(s) 193
Psp6I CCWGG 1 cut(s) 178
PspGI CCWGG 1 cut(s) 178
PspPI GGNCC 1 cut(s) 461
PspXI VCTCGAGB 1 cut(s) 379
PsuI RGATCY 2 cut(s) 183, 541
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
RseI CAYNNNNRTG 3 cut(s) 444, 456, 612
SatI GCNGC 7 cut(s) 6, 78, 81, 84, 96, 135, 138
Sau3AI GATC 4 cut(s) 183, 370, 541, 741
Sau96I GGNCC 1 cut(s) 461
SchI GAGTC 1 cut(s) 193
ScrFI CCNGG 1 cut(s) 180
SetI ASST 9 cut(s) 43, 63, 412, 523, 598, 606, 637, 706, 732
SfaNI GCATC 2 cut(s) 474, 687
SfcI CTRYAG 2 cut(s) 325, 411
Sfr274I CTCGAG 3 cut(s) 379, 548, 636
SinI GGWCC 1 cut(s) 461
SlaI CTCGAG 3 cut(s) 379, 548, 636
SmiMI CAYNNNNRTG 3 cut(s) 444, 456, 612
SmlI CTYRAG 4 cut(s) 203, 379, 548, 636
SmoI CTYRAG 4 cut(s) 203, 379, 548, 636
Sse9I AATT 4 cut(s) 103, 145, 586, 736
SsiI CCGC 8 cut(s) 5, 77, 80, 83, 134, 137, 140, 476
StyD4I CCNGG 1 cut(s) 178
TaaI ACNGT 2 cut(s) 255, 304
TaqI TCGA 8 cut(s) 111, 265, 307, 380, 492, 549, 637, 740
TasI AATT 4 cut(s) 103, 145, 586, 736
TauI GCSGC 6 cut(s) 8, 80, 83, 86, 137, 140
TfiI GAWTC 1 cut(s) 416
TseI GCWGC 1 cut(s) 95
TspDTI ATGAA 5 cut(s) 299, 305, 440, 501, 704
TspGWI ACGGA 2 cut(s) 97, 366
VpaK11BI GGWCC 1 cut(s) 461
XapI RAATTY 3 cut(s) 103, 586, 736
XceI RCATGY 1 cut(s) 679
XhoI CTCGAG 3 cut(s) 379, 548, 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.