Prupe.1G199800_v2.0.a1
MYB Family

Protein of unknown function (DUF3755)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
19431792 .. 19441153
9362 bp
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UTR
Exon/CDS
Intron
Prupe.1G199800.1

Sequence Viewer

Length: 735 bp
ATGGCTAACCCATCTGGGAACCACCAAGAACCGAGCCACGCCTCGTCGTCGTTCAACGGCACCAACCCAAGTAACGGAAACTCTGCGCCGGTGTCGGCACCGGAGAGTTCCGGTGCCGCCATGGCCATGAAACACAACCCTGGTATTTCTATGGATTGGAGCGCAGAGGAGCAGGCAATTCTTGACGATGGGCTCGCCAAATATTCAACAGAATCAAACATAATCCGGTATGCAAAGATAGCTATGCAGCTGCAGAATAAGACTGTCCGAGATGTGGCATTGCGTTGCAGATGGATGACTAAAAAGGAAAACAGCAAGAGAAGGAAGGAAGAACATAACTTAACAAGGAAAAGCAAAGATAAAAAGGAGAGAGTAATTGATACTTCAGCAAAGCCATCTCACTTTGCTGGCCGGCCCAATGTTGCTCCCTATGCTCCCCCAATGGTTACTATGGACAATGATGATGGCATCTCATACAAAGCCATTGGTGGTATTACAGGAGAGCTTCTGGAGCAAAATGCACAAGCCCTGAATCAAATTTCTGCGAACCTTGCAGCTTTCCAGATACAGGAGAACATCAACCTCTTCTGCCAAACTCGAGATAACATCCTCAAAATTATGAATGACTTGAATGACATGCCAGACGTAATGAAGCAGATGCCACCGCTTCCAGTGAAAGTGAATGAGGAGCTAGCAACCCATGTGGGCATCCCACCCCATCAGATGCAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

245

Amino Acids

26.88

Weight (kDa)

7.06

Isoelectric Point (pI)

51.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 59, 97, 113
AciI CCGC 2 cut(s) 117, 665
AcoI YGGCCR 2 cut(s) 123, 409
AcsI RAATTY 1 cut(s) 537
AcuI CTGAAG 1 cut(s) 369
AfiI CCNNNNNNNGG 3 cut(s) 74, 274, 568
AgsI TTSAA 3 cut(s) 55, 207, 631
AjnI CCWGG 1 cut(s) 139
AluBI AGCT 5 cut(s) 242, 250, 505, 557, 691
AluI AGCT 5 cut(s) 242, 250, 505, 557, 691
Ama87I CYCGRG 1 cut(s) 597
AoxI GGCC 3 cut(s) 123, 409, 413
ApeKI GCWGC 3 cut(s) 247, 250, 554
ApoI RAATTY 1 cut(s) 537
AspLEI GCGC 2 cut(s) 88, 164
AspS9I GGNCC 1 cut(s) 414
AsuNHI GCTAGC 1 cut(s) 691
AvaI CYCGRG 1 cut(s) 597
BalI TGGCCA 1 cut(s) 125
BanI GGYRCC 3 cut(s) 59, 97, 113
BanII GRGCYC 1 cut(s) 195
BbvI GCAGC 3 cut(s) 237, 259, 566
BccI CCATC 6 cut(s) 19, 182, 285, 403, 458, 726
BceAI ACGGC 1 cut(s) 73
BciT130I CCWGG 1 cut(s) 141
BfaI CTAG 1 cut(s) 692
BfmI CTRYAG 1 cut(s) 251
BglI GCCNNNNNGGC 1 cut(s) 122
BisI GCNGC 4 cut(s) 117, 248, 251, 555
BlsI GCNGC 4 cut(s) 118, 249, 252, 556
Bme1390I CCNGG 1 cut(s) 141
BmeT110I CYCGRG 1 cut(s) 597
BmgT120I GGNCC 1 cut(s) 414
BmiI GGNNCC 4 cut(s) 20, 61, 99, 115
BmrFI CCNGG 1 cut(s) 141
BmsI GCATC 4 cut(s) 477, 648, 714, 717
BmtI GCTAGC 1 cut(s) 695
BpmI CTGGAG 1 cut(s) 530
BsaJI CCNNGG 2 cut(s) 120, 139
BsaWI WCCGGW 3 cut(s) 100, 110, 225
Bsc4I CCNNNNNNNGG 3 cut(s) 74, 274, 568
Bse118I RCCGGY 2 cut(s) 88, 411
Bse1I ACTGG 1 cut(s) 671
Bse3DI GCAATG 1 cut(s) 278
BseBI CCWGG 1 cut(s) 141
BseDI CCNNGG 2 cut(s) 120, 139
BseGI GGATG 3 cut(s) 300, 606, 708
BseLI CCNNNNNNNGG 3 cut(s) 74, 274, 568
BseMI GCAATG 1 cut(s) 278
BseNI ACTGG 1 cut(s) 671
BseRI GAGGAG 2 cut(s) 182, 701
BseXI GCAGC 3 cut(s) 237, 259, 566
BshFI GGCC 3 cut(s) 125, 411, 415
BshNI GGYRCC 3 cut(s) 59, 97, 113
BsiHKCI CYCGRG 1 cut(s) 597
BsiSI CCGG 5 cut(s) 89, 101, 111, 226, 412
BslI CCNNNNNNNGG 3 cut(s) 74, 274, 568
BsnI GGCC 3 cut(s) 125, 411, 415
BsoBI CYCGRG 1 cut(s) 597
Bsp1286I GDGCHC 1 cut(s) 195
Bsp19I CCATGG 1 cut(s) 120
BspACI CCGC 2 cut(s) 117, 665
BspANI GGCC 3 cut(s) 125, 411, 415
BspHI TCATGA 1 cut(s) 731
BspLI GGNNCC 4 cut(s) 20, 61, 99, 115
BspMAI CTGCAG 1 cut(s) 255
BspOI GCTAGC 1 cut(s) 695
BspT107I GGYRCC 3 cut(s) 59, 97, 113
BsrDI GCAATG 1 cut(s) 278
BsrFI RCCGGY 2 cut(s) 88, 411
BsrI ACTGG 1 cut(s) 671
BssAI RCCGGY 2 cut(s) 88, 411
BssECI CCNNGG 2 cut(s) 120, 139
BssT1I CCWWGG 1 cut(s) 120
Bst2UI CCWGG 1 cut(s) 141
Bst4CI ACNGT 1 cut(s) 265
Bst6I CTCTTC 1 cut(s) 590
BstC8I GCNNGC 5 cut(s) 174, 195, 409, 413, 693
BstDSI CCRYGG 1 cut(s) 120
BstF5I GGATG 3 cut(s) 300, 606, 708
BstHHI GCGC 2 cut(s) 88, 164
BstMWI GCNNNNNNNGC 5 cut(s) 122, 239, 431, 511, 551
BstNI CCWGG 1 cut(s) 141
BstNSI RCATGY 1 cut(s) 640
BstSCI CCNGG 1 cut(s) 139
BstSFI CTRYAG 1 cut(s) 251
BstV1I GCAGC 3 cut(s) 237, 259, 566
BsuRI GGCC 3 cut(s) 125, 411, 415
BtgI CCRYGG 1 cut(s) 120
BtsCI GGATG 3 cut(s) 300, 606, 708
BtsIMutI CAGTG 1 cut(s) 678
Cac8I GCNNGC 5 cut(s) 174, 195, 409, 413, 693
CciI TCATGA 1 cut(s) 731
CfoI GCGC 2 cut(s) 88, 164
Cfr10I RCCGGY 2 cut(s) 88, 411
Cfr13I GGNCC 1 cut(s) 414
CspCI CAANNNNNGTGG 2 cut(s) 684, 719
CviAII CATG 5 cut(s) 121, 127, 637, 701, 732
EaeI YGGCCR 2 cut(s) 123, 409
Eam1104I CTCTTC 1 cut(s) 590
EarI CTCTTC 1 cut(s) 590
Eco130I CCWWGG 1 cut(s) 120
Eco24I GRGCYC 1 cut(s) 195
Eco57I CTGAAG 1 cut(s) 369
Eco88I CYCGRG 1 cut(s) 597
EcoRII CCWGG 1 cut(s) 139
EcoT14I CCWWGG 1 cut(s) 120
EcoT38I GRGCYC 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 120
FaeI CATG 5 cut(s) 124, 130, 640, 704, 735
FatI CATG 5 cut(s) 120, 126, 636, 700, 731
Fnu4HI GCNGC 4 cut(s) 117, 248, 251, 555
FokI GGATG 3 cut(s) 307, 593, 695
FriOI GRGCYC 1 cut(s) 195
FseI GGCCGGCC 1 cut(s) 415
Fsp4HI GCNGC 4 cut(s) 117, 248, 251, 555
FspBI CTAG 1 cut(s) 692
GlaI GCGC 2 cut(s) 87, 163
GluI GCNGC 4 cut(s) 117, 248, 251, 555
GsuI CTGGAG 1 cut(s) 530
HaeIII GGCC 3 cut(s) 125, 411, 415
HapII CCGG 5 cut(s) 89, 101, 111, 226, 412
HhaI GCGC 2 cut(s) 88, 164
Hin1II CATG 5 cut(s) 124, 130, 640, 704, 735
Hin6I GCGC 2 cut(s) 86, 162
HinP1I GCGC 2 cut(s) 86, 162
HinfI GANTC 2 cut(s) 212, 532
HpaII CCGG 5 cut(s) 89, 101, 111, 226, 412
Hpy188I TCNGA 2 cut(s) 269, 723
Hpy188III TCNNGA 5 cut(s) 182, 509, 562, 599, 732
Hpy99I CGWCG 2 cut(s) 49, 52
HpyAV CCTTC 2 cut(s) 315, 319
HpyCH4III ACNGT 1 cut(s) 265
HpyCH4IV ACGT 1 cut(s) 645
HpyCH4V TGCA 7 cut(s) 233, 247, 253, 288, 521, 554, 727
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 239, 431, 511, 551
HpySE526I ACGT 1 cut(s) 645
Hsp92II CATG 5 cut(s) 124, 130, 640, 704, 735
HspAI GCGC 2 cut(s) 86, 162
KroI GCCGGC 1 cut(s) 411
KroNI GCCGGC 1 cut(s) 413
LmnI GCTCC 6 cut(s) 159, 169, 430, 439, 511, 688
Lsp1109I GCAGC 3 cut(s) 237, 259, 566
LweI GCATC 4 cut(s) 477, 648, 714, 717
MaeI CTAG 1 cut(s) 692
MaeII ACGT 1 cut(s) 645
MaeIII GTNAC 2 cut(s) 71, 445
MboII GAAGA 2 cut(s) 341, 577
MhlI GDGCHC 1 cut(s) 195
MlsI TGGCCA 1 cut(s) 125
MluCI AATT 4 cut(s) 177, 375, 537, 615
MluNI TGGCCA 1 cut(s) 125
MnlI CCTC 5 cut(s) 52, 160, 593, 620, 679
Mox20I TGGCCA 1 cut(s) 125
MroNI GCCGGC 1 cut(s) 411
MscI TGGCCA 1 cut(s) 125
MseI TTAA 1 cut(s) 341
MslI CAYNNNNRTG 1 cut(s) 125
Msp20I TGGCCA 1 cut(s) 125
MspA1I CMGCKG 1 cut(s) 250
MspI CCGG 5 cut(s) 89, 101, 111, 226, 412
MspR9I CCNGG 1 cut(s) 141
MvaI CCWGG 1 cut(s) 141
MwoI GCNNNNNNNGC 5 cut(s) 122, 239, 431, 511, 551
NaeI GCCGGC 1 cut(s) 413
NcoI CCATGG 1 cut(s) 120
NgoMIV GCCGGC 1 cut(s) 411
NheI GCTAGC 1 cut(s) 691
NlaIII CATG 5 cut(s) 124, 130, 640, 704, 735
NlaIV GGNNCC 4 cut(s) 20, 61, 99, 115
NspI RCATGY 1 cut(s) 640
PaeR7I CTCGAG 1 cut(s) 597
PagI TCATGA 1 cut(s) 731
PdiI GCCGGC 1 cut(s) 413
PfeI GAWTC 2 cut(s) 212, 532
PkrI GCNGC 4 cut(s) 118, 249, 252, 556
Psp6I CCWGG 1 cut(s) 139
PspGI CCWGG 1 cut(s) 139
PspN4I GGNNCC 4 cut(s) 20, 61, 99, 115
PspPI GGNCC 1 cut(s) 414
PstI CTGCAG 1 cut(s) 255
PvuII CAGCTG 1 cut(s) 250
RigI GGCCGGCC 1 cut(s) 415
RseI CAYNNNNRTG 1 cut(s) 125
SaqAI TTAA 1 cut(s) 341
SatI GCNGC 4 cut(s) 117, 248, 251, 555
Sau96I GGNCC 1 cut(s) 414
ScrFI CCNGG 1 cut(s) 141
SduI GDGCHC 1 cut(s) 195
SetI ASST 8 cut(s) 244, 252, 507, 552, 559, 585, 648, 693
SfaNI GCATC 4 cut(s) 477, 648, 714, 717
SfcI CTRYAG 1 cut(s) 251
Sfr274I CTCGAG 1 cut(s) 597
SgrAI CRCCGGYG 1 cut(s) 88
SlaI CTCGAG 1 cut(s) 597
SmiMI CAYNNNNRTG 1 cut(s) 125
SmlI CTYRAG 1 cut(s) 597
SmoI CTYRAG 1 cut(s) 597
Sse9I AATT 4 cut(s) 177, 375, 537, 615
SsiI CCGC 2 cut(s) 117, 665
SspI AATATT 1 cut(s) 203
SspMI CTAG 1 cut(s) 692
StyD4I CCNGG 1 cut(s) 139
StyI CCWWGG 1 cut(s) 120
TaaI ACNGT 1 cut(s) 265
TaiI ACGT 1 cut(s) 648
TaqI TCGA 1 cut(s) 598
TasI AATT 4 cut(s) 177, 375, 537, 615
TauI GCSGC 1 cut(s) 119
TfiI GAWTC 2 cut(s) 212, 532
Tru1I TTAA 1 cut(s) 341
Tru9I TTAA 1 cut(s) 341
TscAI CASTG 1 cut(s) 678
TseI GCWGC 3 cut(s) 247, 250, 554
TspDTI ATGAA 3 cut(s) 143, 635, 665
TspGWI ACGGA 1 cut(s) 90
TspRI CASTG 1 cut(s) 678
XapI RAATTY 1 cut(s) 537
XceI RCATGY 1 cut(s) 640
XhoI CTCGAG 1 cut(s) 597
XspI CTAG 1 cut(s) 692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.