heat shock protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07770 AT3G07770 AT3G07770 |
| fragaria_vesca | FvH4_6g41100 FvH4_6g41100 |
| malus_domestica | MD09G1122200.v1.1 MD17G1113200.v1.1 |
| prunus_persica | Prupe.3G201400_v2.0.a1 |
| pyrus_communis | pycom09g04650 pycom17g10480 |
| rosa_chinensis | RchiOBHm_Chr2g0156661 |
| rosa_laevigata | RLG00000020929 |
| rosa_multiflora | Rmu_sc0001130.1_g000001 Rmu_sc0018228.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092860 |
| rosa_rugosa | Rorug02G0455200 |
| rosa_samantha | Rh2AG520800 Rh2BG534000 Rh2CG505800 Rh2DG542800 |
| rosa_wichuraiana | Rw0G013720 Rw2G042970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1806 |
| AarI | CACCTGC | 1 cut(s) | 605 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 329 |
| Acc36I | ACCTGC | 1 cut(s) | 605 |
| AccBSI | CCGCTC | 1 cut(s) | 859 |
| AciI | CCGC | 6 cut(s) | 69, 72, 576, 859, 1420, 2312 |
| AclWI | GGATC | 4 cut(s) | 845, 953, 1430, 1854 |
| AcsI | RAATTY | 4 cut(s) | 287, 745, 1953, 2000 |
| AcuI | CTGAAG | 2 cut(s) | 324, 2382 |
| AcvI | CACGTG | 1 cut(s) | 1391 |
| AfaI | GTAC | 4 cut(s) | 143, 1334, 1752, 1788 |
| AfeI | AGCGCT | 1 cut(s) | 20 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1093, 2289 |
| AflII | CTTAAG | 1 cut(s) | 824 |
| AhlI | ACTAGT | 1 cut(s) | 2203 |
| Alw21I | GWGCWC | 1 cut(s) | 438 |
| Alw26I | GTCTC | 4 cut(s) | 31, 1055, 1848, 2342 |
| AlwI | GGATC | 4 cut(s) | 845, 953, 1430, 1854 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 854 |
| Aor51HI | AGCGCT | 1 cut(s) | 20 |
| ApeKI | GCWGC | 9 cut(s) | 74, 242, 245, 1078, 1877, 2135, 2198, 2308, 2314 |
| ApoI | RAATTY | 4 cut(s) | 287, 745, 1953, 2000 |
| AspLEI | GCGC | 1 cut(s) | 21 |
| AspS9I | GGNCC | 2 cut(s) | 322, 1150 |
| AsuC2I | CCSGG | 1 cut(s) | 2284 |
| AsuHPI | GGTGA | 5 cut(s) | 632, 1108, 1218, 1943, 2063 |
| AvaII | GGWCC | 2 cut(s) | 322, 1150 |
| AxyI | CCTNAGG | 2 cut(s) | 1089, 2301 |
| BanII | GRGCYC | 2 cut(s) | 438, 707 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1770, 1802 |
| BauI | CACGAG | 1 cut(s) | 872 |
| BbrPI | CACGTG | 1 cut(s) | 1391 |
| BbsI | GAAGAC | 4 cut(s) | 1019, 1500, 1557, 1845 |
| Bbv12I | GWGCWC | 1 cut(s) | 438 |
| BbvI | GCAGC | 9 cut(s) | 86, 254, 257, 1065, 1889, 2122, 2210, 2320, 2326 |
| BccI | CCATC | 7 cut(s) | 106, 132, 1237, 1307, 2260, 2320, 2381 |
| BceAI | ACGGC | 2 cut(s) | 545, 1769 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 221, 255, 1060, 1094 |
| BciVI | GTATCC | 2 cut(s) | 215, 923 |
| BclI | TGATCA | 2 cut(s) | 3, 1620 |
| BcnI | CCSGG | 1 cut(s) | 2284 |
| BcoDI | GTCTC | 4 cut(s) | 31, 1055, 1848, 2342 |
| BcuI | ACTAGT | 1 cut(s) | 2203 |
| BfaI | CTAG | 5 cut(s) | 798, 1439, 1850, 2204, 2211 |
| BfoI | RGCGCY | 1 cut(s) | 22 |
| BfrI | CTTAAG | 1 cut(s) | 824 |
| BfuAI | ACCTGC | 1 cut(s) | 605 |
| BfuI | GTATCC | 2 cut(s) | 215, 923 |
| BglII | AGATCT | 1 cut(s) | 2182 |
| BmcAI | AGTACT | 1 cut(s) | 1752 |
| Bme1390I | CCNGG | 1 cut(s) | 2284 |
| Bme18I | GGWCC | 2 cut(s) | 322, 1150 |
| BmgT120I | GGNCC | 2 cut(s) | 322, 1150 |
| BmiI | GGNNCC | 2 cut(s) | 574, 1152 |
| BmrFI | CCNGG | 1 cut(s) | 2284 |
| BmrI | ACTGGG | 2 cut(s) | 883, 1048 |
| BmsI | GCATC | 9 cut(s) | 257, 382, 436, 601, 829, 1554, 1719, 2155, 2332 |
| BmuI | ACTGGG | 2 cut(s) | 883, 1048 |
| BpiI | GAAGAC | 4 cut(s) | 1019, 1500, 1557, 1845 |
| BpmI | CTGGAG | 1 cut(s) | 1754 |
| Bpu10I | CCTNAGC | 2 cut(s) | 432, 855 |
| BpuEI | CTTGAG | 2 cut(s) | 1357, 1498 |
| BpuMI | CCSGG | 1 cut(s) | 2284 |
| BsaAI | YACGTR | 2 cut(s) | 467, 1391 |
| BsaJI | CCNNGG | 2 cut(s) | 105, 1328 |
| BsaWI | WCCGGW | 2 cut(s) | 44, 225 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1093, 2289 |
| Bse118I | RCCGGY | 1 cut(s) | 277 |
| Bse1I | ACTGG | 7 cut(s) | 237, 889, 1043, 1916, 1944, 2053, 2375 |
| Bse21I | CCTNAGG | 2 cut(s) | 1089, 2301 |
| Bse3DI | GCAATG | 2 cut(s) | 1677, 2175 |
| BseDI | CCNNGG | 2 cut(s) | 105, 1328 |
| BseGI | GGATG | 7 cut(s) | 115, 616, 1163, 1246, 1636, 2275, 2392 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1093, 2289 |
| BseMI | GCAATG | 2 cut(s) | 1677, 2175 |
| BseMII | CTCAG | 5 cut(s) | 273, 423, 846, 990, 2292 |
| BseNI | ACTGG | 7 cut(s) | 237, 889, 1043, 1916, 1944, 2053, 2375 |
| BseRI | GAGGAG | 3 cut(s) | 261, 1588, 1880 |
| BseXI | GCAGC | 9 cut(s) | 86, 254, 257, 1065, 1889, 2122, 2210, 2320, 2326 |
| BseYI | CCCAGC | 1 cut(s) | 2242 |
| BsgI | GTGCAG | 2 cut(s) | 261, 2327 |
| BsiHKAI | GWGCWC | 1 cut(s) | 438 |
| BsiSI | CCGG | 4 cut(s) | 45, 226, 278, 2283 |
| BslFI | GGGAC | 1 cut(s) | 568 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1093, 2289 |
| BsmAI | GTCTC | 4 cut(s) | 31, 1055, 1848, 2342 |
| BsmBI | CGTCTC | 2 cut(s) | 31, 2342 |
| BsmFI | GGGAC | 1 cut(s) | 568 |
| BsmI | GAATGC | 1 cut(s) | 1714 |
| Bsp1286I | GDGCHC | 2 cut(s) | 438, 707 |
| BspACI | CCGC | 6 cut(s) | 69, 72, 576, 859, 1420, 2312 |
| BspCNI | CTCAG | 5 cut(s) | 274, 424, 847, 991, 2293 |
| BspHI | TCATGA | 2 cut(s) | 585, 1425 |
| BspLI | GGNNCC | 2 cut(s) | 574, 1152 |
| BspMI | ACCTGC | 1 cut(s) | 605 |
| BspPI | GGATC | 4 cut(s) | 845, 953, 1430, 1854 |
| BspTI | CTTAAG | 1 cut(s) | 824 |
| BsrBI | CCGCTC | 1 cut(s) | 859 |
| BsrDI | GCAATG | 2 cut(s) | 1677, 2175 |
| BsrFI | RCCGGY | 1 cut(s) | 277 |
| BsrI | ACTGG | 7 cut(s) | 237, 889, 1043, 1916, 1944, 2053, 2375 |
| BssAI | RCCGGY | 1 cut(s) | 277 |
| BssECI | CCNNGG | 2 cut(s) | 105, 1328 |
| BssSI | CACGAG | 1 cut(s) | 872 |
| Bst2BI | CACGAG | 1 cut(s) | 872 |
| Bst4CI | ACNGT | 3 cut(s) | 548, 1556, 1964 |
| Bst6I | CTCTTC | 1 cut(s) | 2080 |
| BstAFI | CTTAAG | 1 cut(s) | 824 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 392 |
| BstBAI | YACGTR | 2 cut(s) | 467, 1391 |
| BstDSI | CCRYGG | 1 cut(s) | 105 |
| BstEII | GGTNACC | 1 cut(s) | 47 |
| BstF5I | GGATG | 7 cut(s) | 115, 616, 1163, 1246, 1636, 2275, 2392 |
| BstH2I | RGCGCY | 1 cut(s) | 22 |
| BstHHI | GCGC | 1 cut(s) | 21 |
| BstMAI | GTCTC | 4 cut(s) | 31, 1055, 1848, 2342 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 16, 74, 345, 392, 826, 1709, 2174, 2314, 2320 |
| BstPI | GGTNACC | 1 cut(s) | 47 |
| BstSCI | CCNGG | 1 cut(s) | 2282 |
| BstSNI | TACGTA | 1 cut(s) | 467 |
| BstV1I | GCAGC | 9 cut(s) | 86, 254, 257, 1065, 1889, 2122, 2210, 2320, 2326 |
| BstV2I | GAAGAC | 4 cut(s) | 1019, 1500, 1557, 1845 |
| BstX2I | RGATCY | 3 cut(s) | 850, 1846, 2182 |
| BstYI | RGATCY | 3 cut(s) | 850, 1846, 2182 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1089, 2301 |
| BsuI | GTATCC | 2 cut(s) | 215, 923 |
| BtgI | CCRYGG | 1 cut(s) | 105 |
| BtsCI | GGATG | 7 cut(s) | 115, 616, 1163, 1246, 1636, 2275, 2392 |
| BtsI | GCAGTG | 2 cut(s) | 1580, 1887 |
| BtsIMutI | CAGTG | 6 cut(s) | 126, 244, 504, 1580, 1887, 1951 |
| BveI | ACCTGC | 1 cut(s) | 605 |
| CaiI | CAGNNNCTG | 1 cut(s) | 854 |
| CciI | TCATGA | 2 cut(s) | 585, 1425 |
| CfoI | GCGC | 1 cut(s) | 21 |
| Cfr10I | RCCGGY | 1 cut(s) | 277 |
| Cfr13I | GGNCC | 2 cut(s) | 322, 1150 |
| CseI | GACGC | 1 cut(s) | 2204 |
| Csp6I | GTAC | 4 cut(s) | 142, 1333, 1751, 1787 |
| CviAII | CATG | 8 cut(s) | 199, 319, 586, 1367, 1426, 1618, 1648, 2074 |
| CviQI | GTAC | 4 cut(s) | 142, 1333, 1751, 1787 |
| DraI | TTTAAA | 1 cut(s) | 1797 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 329 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 329 |
| Eam1104I | CTCTTC | 1 cut(s) | 2080 |
| EarI | CTCTTC | 1 cut(s) | 2080 |
| Ecl136II | GAGCTC | 1 cut(s) | 436 |
| Eco105I | TACGTA | 1 cut(s) | 467 |
| Eco24I | GRGCYC | 2 cut(s) | 438, 707 |
| Eco32I | GATATC | 1 cut(s) | 1828 |
| Eco47I | GGWCC | 2 cut(s) | 322, 1150 |
| Eco47III | AGCGCT | 1 cut(s) | 20 |
| Eco53kI | GAGCTC | 1 cut(s) | 436 |
| Eco57I | CTGAAG | 2 cut(s) | 324, 2382 |
| Eco72I | CACGTG | 1 cut(s) | 1391 |
| Eco81I | CCTNAGG | 2 cut(s) | 1089, 2301 |
| Eco91I | GGTNACC | 1 cut(s) | 47 |
| EcoICRI | GAGCTC | 1 cut(s) | 436 |
| EcoO65I | GGTNACC | 1 cut(s) | 47 |
| EcoRV | GATATC | 1 cut(s) | 1828 |
| EcoT22I | ATGCAT | 1 cut(s) | 397 |
| EcoT38I | GRGCYC | 2 cut(s) | 438, 707 |
| Esp3I | CGTCTC | 2 cut(s) | 31, 2342 |
| FaeI | CATG | 8 cut(s) | 202, 322, 589, 1370, 1429, 1621, 1651, 2077 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1826, 1858 |
| FaqI | GGGAC | 1 cut(s) | 568 |
| FatI | CATG | 8 cut(s) | 198, 318, 585, 1366, 1425, 1617, 1647, 2073 |
| FbaI | TGATCA | 2 cut(s) | 3, 1620 |
| FokI | GGATG | 6 cut(s) | 122, 623, 1150, 1253, 1643, 2282 |
| FriOI | GRGCYC | 2 cut(s) | 438, 707 |
| FspBI | CTAG | 5 cut(s) | 798, 1439, 1850, 2204, 2211 |
| GlaI | GCGC | 1 cut(s) | 20 |
| GsaI | CCCAGC | 1 cut(s) | 2246 |
| GsuI | CTGGAG | 1 cut(s) | 1754 |
| HaeII | RGCGCY | 1 cut(s) | 22 |
| HapII | CCGG | 4 cut(s) | 45, 226, 278, 2283 |
| HgaI | GACGC | 1 cut(s) | 2204 |
| HhaI | GCGC | 1 cut(s) | 21 |
| Hin1II | CATG | 8 cut(s) | 202, 322, 589, 1370, 1429, 1621, 1651, 2077 |
| Hin6I | GCGC | 1 cut(s) | 19 |
| HinP1I | GCGC | 1 cut(s) | 19 |
| HincII | GTYRAC | 3 cut(s) | 334, 544, 696 |
| HindII | GTYRAC | 3 cut(s) | 334, 544, 696 |
| HindIII | AAGCTT | 4 cut(s) | 55, 404, 1131, 1800 |
| HinfI | GANTC | 8 cut(s) | 131, 233, 254, 492, 509, 862, 1361, 1396 |
| HpaII | CCGG | 4 cut(s) | 45, 226, 278, 2283 |
| HphI | GGTGA | 5 cut(s) | 632, 1108, 1218, 1943, 2063 |
| Hpy166II | GTNNAC | 5 cut(s) | 334, 544, 696, 1360, 2220 |
| Hpy188I | TCNGA | 5 cut(s) | 253, 715, 867, 1303, 1687 |
| Hpy8I | GTNNAC | 5 cut(s) | 334, 544, 696, 1360, 2220 |
| HpyAV | CCTTC | 6 cut(s) | 728, 1015, 1231, 1441, 1807, 2029 |
| HpyCH4III | ACNGT | 3 cut(s) | 548, 1556, 1964 |
| HpyCH4IV | ACGT | 4 cut(s) | 466, 1390, 1435, 2351 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 16, 74, 345, 392, 826, 1709, 2174, 2314, 2320 |
| HpySE526I | ACGT | 4 cut(s) | 466, 1390, 1435, 2351 |
| Hsp92II | CATG | 8 cut(s) | 202, 322, 589, 1370, 1429, 1621, 1651, 2077 |
| HspAI | GCGC | 1 cut(s) | 19 |
| Ksp22I | TGATCA | 2 cut(s) | 3, 1620 |
| LmnI | GCTCC | 8 cut(s) | 26, 47, 274, 370, 454, 1048, 1318, 1582 |
| Lsp1109I | GCAGC | 9 cut(s) | 86, 254, 257, 1065, 1889, 2122, 2210, 2320, 2326 |
| LweI | GCATC | 9 cut(s) | 257, 382, 436, 601, 829, 1554, 1719, 2155, 2332 |
| MaeI | CTAG | 5 cut(s) | 798, 1439, 1850, 2204, 2211 |
| MaeII | ACGT | 4 cut(s) | 466, 1390, 1435, 2351 |
| MbiI | CCGCTC | 1 cut(s) | 859 |
| MfeI | CAATTG | 2 cut(s) | 191, 208 |
| MflI | RGATCY | 3 cut(s) | 850, 1846, 2182 |
| MhlI | GDGCHC | 2 cut(s) | 438, 707 |
| MlyI | GAGTC | 1 cut(s) | 1355 |
| MmeI | TCCRAC | 2 cut(s) | 986, 1983 |
| Mph1103I | ATGCAT | 1 cut(s) | 397 |
| MseI | TTAA | 7 cut(s) | 152, 632, 825, 1284, 1347, 1380, 1796 |
| MspCI | CTTAAG | 1 cut(s) | 824 |
| MspI | CCGG | 4 cut(s) | 45, 226, 278, 2283 |
| MspR9I | CCNGG | 1 cut(s) | 2284 |
| MunI | CAATTG | 2 cut(s) | 191, 208 |
| Mva1269I | GAATGC | 1 cut(s) | 1714 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 16, 74, 345, 392, 826, 1709, 2174, 2314, 2320 |
| NciI | CCSGG | 1 cut(s) | 2284 |
| NlaIII | CATG | 8 cut(s) | 202, 322, 589, 1370, 1429, 1621, 1651, 2077 |
| NlaIV | GGNNCC | 2 cut(s) | 574, 1152 |
| NmuCI | GTSAC | 6 cut(s) | 122, 620, 1096, 1907, 1931, 2051 |
| NsiI | ATGCAT | 1 cut(s) | 397 |
| PagI | TCATGA | 2 cut(s) | 585, 1425 |
| PaqCI | CACCTGC | 1 cut(s) | 605 |
| PctI | GAATGC | 1 cut(s) | 1714 |
| PfeI | GAWTC | 7 cut(s) | 131, 233, 254, 492, 509, 862, 1396 |
| PflFI | GACNNNGTC | 1 cut(s) | 1247 |
| PfoI | TCCNGGA | 1 cut(s) | 2282 |
| PleI | GAGTC | 1 cut(s) | 1355 |
| PmaCI | CACGTG | 1 cut(s) | 1391 |
| PmlI | CACGTG | 1 cut(s) | 1391 |
| PpsI | GAGTC | 1 cut(s) | 1355 |
| Ppu21I | YACGTR | 2 cut(s) | 467, 1391 |
| PsiI | TTATAA | 1 cut(s) | 1806 |
| Psp124BI | GAGCTC | 1 cut(s) | 438 |
| PspCI | CACGTG | 1 cut(s) | 1391 |
| PspEI | GGTNACC | 1 cut(s) | 47 |
| PspFI | CCCAGC | 1 cut(s) | 2242 |
| PspN4I | GGNNCC | 2 cut(s) | 574, 1152 |
| PspPI | GGNCC | 2 cut(s) | 322, 1150 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 796, 828 |
| PstNI | CAGNNNCTG | 1 cut(s) | 854 |
| PsuI | RGATCY | 3 cut(s) | 850, 1846, 2182 |
| PsyI | GACNNNGTC | 1 cut(s) | 1247 |
| RsaI | GTAC | 4 cut(s) | 143, 1334, 1752, 1788 |
| RsaNI | GTAC | 4 cut(s) | 142, 1333, 1751, 1787 |
| SacI | GAGCTC | 1 cut(s) | 438 |
| SaqAI | TTAA | 7 cut(s) | 152, 632, 825, 1284, 1347, 1380, 1796 |
| Sau96I | GGNCC | 2 cut(s) | 322, 1150 |
| ScaI | AGTACT | 1 cut(s) | 1752 |
| SchI | GAGTC | 1 cut(s) | 1355 |
| ScrFI | CCNGG | 1 cut(s) | 2284 |
| SduI | GDGCHC | 2 cut(s) | 438, 707 |
| SfaNI | GCATC | 9 cut(s) | 257, 382, 436, 601, 829, 1554, 1719, 2155, 2332 |
| SinI | GGWCC | 2 cut(s) | 322, 1150 |
| SmlI | CTYRAG | 3 cut(s) | 824, 1336, 1477 |
| SmoI | CTYRAG | 3 cut(s) | 824, 1336, 1477 |
| SnaBI | TACGTA | 1 cut(s) | 467 |
| SpeI | ACTAGT | 1 cut(s) | 2203 |
| SsiI | CCGC | 6 cut(s) | 69, 72, 576, 859, 1420, 2312 |
| SspMI | CTAG | 5 cut(s) | 798, 1439, 1850, 2204, 2211 |
| SstI | GAGCTC | 1 cut(s) | 438 |
| StyD4I | CCNGG | 1 cut(s) | 2282 |
| TaaI | ACNGT | 3 cut(s) | 548, 1556, 1964 |
| TaiI | ACGT | 4 cut(s) | 469, 1393, 1438, 2354 |
| TaqI | TCGA | 8 cut(s) | 134, 291, 1191, 1548, 1588, 1722, 2067, 2379 |
| TatI | WGTACW | 1 cut(s) | 1750 |
| TauI | GCSGC | 3 cut(s) | 71, 74, 2314 |
| TfiI | GAWTC | 7 cut(s) | 131, 233, 254, 492, 509, 862, 1396 |
| Tru1I | TTAA | 7 cut(s) | 152, 632, 825, 1284, 1347, 1380, 1796 |
| Tru9I | TTAA | 7 cut(s) | 152, 632, 825, 1284, 1347, 1380, 1796 |
| TscAI | CASTG | 6 cut(s) | 133, 244, 511, 1587, 1887, 1951 |
| TseFI | GTSAC | 6 cut(s) | 122, 620, 1096, 1907, 1931, 2051 |
| TseI | GCWGC | 9 cut(s) | 74, 242, 245, 1078, 1877, 2135, 2198, 2308, 2314 |
| Tsp45I | GTSAC | 6 cut(s) | 122, 620, 1096, 1907, 1931, 2051 |
| TspGWI | ACGGA | 3 cut(s) | 13, 50, 122 |
| TspRI | CASTG | 6 cut(s) | 133, 244, 511, 1587, 1887, 1951 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1247 |
| Vha464I | CTTAAG | 1 cut(s) | 824 |
| VpaK11BI | GGWCC | 2 cut(s) | 322, 1150 |
| XapI | RAATTY | 4 cut(s) | 287, 745, 1953, 2000 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 214 |
| XspI | CTAG | 5 cut(s) | 798, 1439, 1850, 2204, 2211 |
| ZrmI | AGTACT | 1 cut(s) | 1752 |
| Zsp2I | ATGCAT | 1 cut(s) | 397 |