Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0009264

Physical Location & Seq

Genomic Coordinates Reverse (-)

14320181 .. 14325705

Gene Structure 5525 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00092860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGCACAGGATCTCTCGCCGCTCTCTCTCCACTCTCCTCCGCCACGCCGCACCTTACCGGAACGCCGCCGCCCCAATCTCTCACTCCGGCTCGGTGGTGGGAGAGAGTGATACCAAAGTCAGATGGCACTCGGTGTTAGTCGGTGGGAAGTGTAACCCTGCCAAATCCACAACTCAAATAAACTTGAAAAATGGCCTCTATTTCGGTAACCGGTATGAGTCCACTGCTGCAGCCTCGGATGCAACAGCCGCACCACCTGTTGAGAAATACGAGTATCAAGCTGAGGTTAGTCGCCTTATGGACCTCATTGTTAACAGCTTGTACAGCAACAAGGAGGTGTTCCTTCGAGAGCTTGTCAGCAATGCGAGTGATGCCTTGGACAAGCTCCGGTTTCTTAGTGTTACAGAACCTGACCTTTTGAAGGGTGGAGGTGAGCTTGATATCCGTATCCAGACTGATACTGACAATGGAATCATAAATATCACTGATTCTGGCATTGGAATGACTCGGGAAGAGCTTGTGGATTGTTTGGGAACAATTGCACAAAGTGGGACTTCAAAGTTCTTGAAGGCATTAAAGGATACTAAAGATGCTGGTGGTGACAGCAATTTAATTGGCCAGTTTGGTGTTGGCTTTTACTCCGCATTCCTGGTTGCAGATCGGGTTGTTGTCTCTACAAAGTCTCCGAAATCTGACAAACAATATGTATGGCAAGGAGAGGCAAATGCTAGCTCTTATACGATTCAGGAGGAGACTGACCCTGAGAAGATTCTTCCTAGGGGAACCCGCTTGACCTTGTATCTGAAGCGTGACGACAAAGGTTTTGCTCATCCAGAACGTATTCAGAAGCTTGTGAAAAACTATTCACAGTTTGTTTCTTTTCCTATATACACCTGGCAGGAAAAGGGATACACTAAAGAGGTTGAGGTCGATGAGGATCCAGCTGAATCCAAAAAAGATGAGCAAGATAACAAGACTGAGAAGAAGAAGAAAACTAAGACTGTTGTTGAGAAATACTGGGATTGGGATCTCACTAATGAAACACAACCAATATGGCTTCGCAATCCTAAAGAAGTCACTACAGAGGATTACAATGAGTTCTACAAGAAAACTTTTAATGAATACTTGGATCCACTGGCTTCTTCACACTTTACAACAGAGGGTGAAGTAGAATTCAGGTCTATATTATATGTCCCAGCTGTTGCTCCTATGGGAAAGGATGACATGATCAATCCCAAGACAAAAAATATAAGGCTCTATGTGAAACGGGTGTTCATTTCAGATGACTTTGATGGAGAACTGGTGCGGATTATGAGGAAGCGTTTAGTTCGAAAGGCCTTTGACATGATTCTGGGAATATCCATGAGTGAAAACAGAGAGGATTATGAGAAGTTCTGGGAAAATTTTGGCAAACACATGAAACTGGGTTGCATTGAAGATCGTGAAAATCATAAACGTCTTGCCCCATTGCTTAGATTTTTCTCTTCCCAAAGTGAGGATGTTATGATCAGCTTGGATGAATATGTTGAGAACATGAAACCTGAGCAGAAGGATATCTATTTCATTGCTGCTGACAGTGTGACAAGCGCAAGTAATACGCCATTCCTGGAGAAACTTCTTCAGAAGGATCTTGAAGTACTGTATTTAGTTGATCCTATTGATGAGGTTGCCATTACAAACTTAAAATCATACAAGGAAAAGAATTTTGTTGATATTAGCAAGGAAGATCTGAATTTAGGGGATAAGAATGAGGAAAAAGAAAAGGAGATTAAGCAGGAGTTTGGCCAAACATGTGATTGGATCAAGAAGCGTTTGGGTGATAAAGTTGCCAGTGTTCAGATTTCAAACCGTCTTAGCACATCACCCTGCGTTCTTGTATCTGGGAAGTTCGGTTGGTCTGCCAACATGGAGAGGTTGATGAAGGCACAAACTGTTGGGGATACTTCCAGCTTAGAGTACATGAGAGGCAGAAGGGTCTTTGAGATTAATCCTGAGCACCCAATCATTCAAAACTTGAATGCTGCAAGCAGAGTTAATCCAGACGATGCAGATGCAATGAGAGCTATTGATCTTTTGTATGATGCAGCTTTGGTTTCTAGCGGTTTTACTCCCGAGAATCCAGCAGAGCTGGGTGGAAAGATTTATGAGATGATGGGGCTGGCTCTTTCGGGGAAATGGTCTGCACCTGTTGCCGAGGTCCAGGAGGTTCAGCATCAAGAAGCCGCCCCACAGCACAACAGCACCGAGACATTAGAGGGTGAGGTGGTTGAGCCAGTCCAAGCTGGTAGCCAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008144 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0017076 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

765

Amino Acids

86.47

Weight (kDa)

5.35

Isoelectric Point (pI)

35.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	112 - 243	6.1e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c	PF02518	113 - 270	2.8e-06	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90	PF00183	275 - 431	5.9e-51	Hsp90 protein
HSP90	PF00183	433 - 745	9.6e-112	Hsp90 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07770 AT3G07770 AT3G07770
fragaria_vesca	FvH4_6g41100 FvH4_6g41100
malus_domestica	MD09G1122200.v1.1 MD17G1113200.v1.1
prunus_persica	Prupe.3G201400_v2.0.a1
pyrus_communis	pycom09g04650 pycom17g10480
rosa_chinensis	RchiOBHm_Chr2g0156661
rosa_laevigata	RLG00000020929
rosa_multiflora	Rmu_sc0001130.1_g000001 Rmu_sc0018228.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092860
rosa_rugosa	Rorug02G0455200
rosa_samantha	Rh2AG520800 Rh2BG534000 Rh2CG505800 Rh2DG542800
rosa_wichuraiana	Rw0G013720 Rw2G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	21
AclWI	GGATC	9 cut(s)	17, 932, 945, 1035, 1124, 1137, 1635, 1646, 1808
AcoI	YGGCCR	2 cut(s)	616, 1783
AcsI	RAATTY	4 cut(s)	1172, 1402, 1702, 1732
AcuI	CTGAAG	2 cut(s)	824, 1604
AdeI	CACNNNGTG	2 cut(s)	133, 548
AfaI	GTAC	3 cut(s)	323, 1638, 1958
AfiI	CCNNNNNNNGG	2 cut(s)	421, 1495
AflIII	ACRYGT	1 cut(s)	1790
AgeI	ACCGGT	1 cut(s)	210
AgsI	TTSAA	9 cut(s)	187, 421, 558, 568, 1436, 1634, 1845, 2009, 2017
AjnI	CCWGG	4 cut(s)	648, 893, 1605, 2199
Alw21I	GWGCWC	1 cut(s)	1998
Alw26I	GTCTC	4 cut(s)	676, 687, 746, 2240
AlwI	GGATC	9 cut(s)	17, 932, 945, 1035, 1124, 1137, 1635, 1646, 1808
AlwNI	CAGNNNCTG	1 cut(s)	410
Ama87I	CYCGRG	2 cut(s)	507, 2111
AoxI	GGCC	4 cut(s)	193, 616, 1335, 1783
ApeKI	GCWGC	5 cut(s)	227, 230, 1568, 2021, 2084
ApoI	RAATTY	4 cut(s)	1172, 1402, 1702, 1732
ArsI	GACNNNNNNTTYG	2 cut(s)	806, 838
AseI	ATTAAT	1 cut(s)	1986
AsiGI	ACCGGT	1 cut(s)	210
Asp700I	GAANNNNTTC	1 cut(s)	840
AspA2I	CCTAGG	1 cut(s)	776
AspLEI	GCGC	1 cut(s)	1589
AspS9I	GGNCC	2 cut(s)	301, 2197
AsuHPI	GGTGA	6 cut(s)	443, 611, 1175, 1829, 1854, 2270
AsuII	TTCGAA	1 cut(s)	1330
AsuNHI	GCTAGC	1 cut(s)	728
AvaI	CYCGRG	2 cut(s)	507, 2111
AvaII	GGWCC	2 cut(s)	301, 2197
AvrII	CCTAGG	1 cut(s)	776
BaeI	ACNNNNGTAYC	2 cut(s)	102, 135
BalI	TGGCCA	2 cut(s)	618, 1785
BamHI	GGATCC	2 cut(s)	937, 1129
Bbv12I	GWGCWC	1 cut(s)	1998
BbvCI	CCTCAGC	1 cut(s)	282
BbvI	GCAGC	5 cut(s)	214, 242, 1555, 2008, 2096
BccI	CCATC	3 cut(s)	117, 1286, 2146
BcgI	CGANNNNNNTGC	2 cut(s)	2033, 2067
BciT130I	CCWGG	4 cut(s)	650, 895, 1607, 2201
BciVI	GTATCC	4 cut(s)	458, 574, 902, 1933
BclI	TGATCA	2 cut(s)	1227, 1506
BcoDI	GTCTC	4 cut(s)	676, 687, 746, 2240
BfaI	CTAG	3 cut(s)	729, 777, 2097
BfmI	CTRYAG	2 cut(s)	228, 1080
BfuI	GTATCC	4 cut(s)	458, 574, 902, 1933
BglII	AGATCT	1 cut(s)	1726
BlnI	CCTAGG	1 cut(s)	776
BmcAI	AGTACT	1 cut(s)	1638
Bme1390I	CCNGG	4 cut(s)	650, 895, 1607, 2201
Bme18I	GGWCC	2 cut(s)	301, 2197
BmeT110I	CYCGRG	2 cut(s)	507, 2111
BmgT120I	GGNCC	2 cut(s)	301, 2197
BmiI	GGNNCC	3 cut(s)	784, 939, 1131
BmrFI	CCNGG	4 cut(s)	650, 895, 1607, 2201
BmrI	ACTGGG	2 cut(s)	1027, 1433
BmsI	GCATC	7 cut(s)	229, 361, 580, 2035, 2041, 2071, 2221
BmtI	GCTAGC	1 cut(s)	732
BmuI	ACTGGG	2 cut(s)	1027, 1433
BpmI	CTGGAG	1 cut(s)	1628
Bpu10I	CCTNAGC	3 cut(s)	282, 1542, 1992
Bpu14I	TTCGAA	1 cut(s)	1330
BsaBI	GATNNNNATC	2 cut(s)	936, 1026
BsaJI	CCNNGG	4 cut(s)	234, 375, 776, 2193
BsaWI	WCCGGW	3 cut(s)	57, 210, 387
BsaXI	ACNNNNNCTCC	4 cut(s)	667, 697, 1287, 1317
Bsc4I	CCNNNNNNNGG	2 cut(s)	421, 1495
Bse118I	RCCGGY	1 cut(s)	210
Bse1I	ACTGG	7 cut(s)	619, 1022, 1140, 1305, 1428, 1830, 2273
Bse3DI	GCAATG	4 cut(s)	367, 1466, 1563, 2061
Bse8I	GATNNNNATC	2 cut(s)	936, 1026
BseBI	CCWGG	4 cut(s)	650, 895, 1607, 2201
BseDI	CCNNGG	4 cut(s)	234, 375, 776, 2193
BseGI	GGATG	5 cut(s)	244, 829, 1225, 1504, 1522
BseJI	GATNNNNATC	2 cut(s)	936, 1026
BseLI	CCNNNNNNNGG	2 cut(s)	421, 1495
BseMI	GCAATG	4 cut(s)	367, 1466, 1563, 2061
BseMII	CTCAG	5 cut(s)	273, 753, 969, 1533, 1983
BseNI	ACTGG	7 cut(s)	619, 1022, 1140, 1305, 1428, 1830, 2273
BseRI	GAGGAG	2 cut(s)	26, 764
BseXI	GCAGC	5 cut(s)	214, 242, 1555, 2008, 2096
BseYI	CCCAGC	2 cut(s)	1195, 2128
BsgI	GTGCAG	1 cut(s)	2166
BshFI	GGCC	4 cut(s)	195, 618, 1337, 1785
BshTI	ACCGGT	1 cut(s)	210
BsiHKAI	GWGCWC	1 cut(s)	1998
BsiHKCI	CYCGRG	2 cut(s)	507, 2111
BsiSI	CCGG	4 cut(s)	58, 87, 211, 388
BslFI	GGGAC	2 cut(s)	565, 1178
BslI	CCNNNNNNNGG	2 cut(s)	421, 1495
BsmAI	GTCTC	4 cut(s)	676, 687, 746, 2240
BsmFI	GGGAC	2 cut(s)	565, 1178
BsmI	GAATGC	2 cut(s)	644, 2023
BsnI	GGCC	4 cut(s)	195, 618, 1337, 1785
BsoBI	CYCGRG	2 cut(s)	507, 2111
Bsp119I	TTCGAA	1 cut(s)	1330
Bsp1286I	GDGCHC	1 cut(s)	1998
Bsp1407I	TGTACA	1 cut(s)	321
BspANI	GGCC	4 cut(s)	195, 618, 1337, 1785
BspCNI	CTCAG	5 cut(s)	274, 754, 970, 1534, 1984
BspLI	GGNNCC	3 cut(s)	784, 939, 1131
BspMAI	CTGCAG	1 cut(s)	232
BspOI	GCTAGC	1 cut(s)	732
BspPI	GGATC	9 cut(s)	17, 932, 945, 1035, 1124, 1137, 1635, 1646, 1808
BspQI	GCTCTTC	1 cut(s)	507
BspT104I	TTCGAA	1 cut(s)	1330
BsrBI	CCGCTC	1 cut(s)	21
BsrDI	GCAATG	4 cut(s)	367, 1466, 1563, 2061
BsrFI	RCCGGY	1 cut(s)	210
BsrGI	TGTACA	1 cut(s)	321
BsrI	ACTGG	7 cut(s)	619, 1022, 1140, 1305, 1428, 1830, 2273
BssAI	RCCGGY	1 cut(s)	210
BssECI	CCNNGG	4 cut(s)	234, 375, 776, 2193
BssT1I	CCWWGG	2 cut(s)	375, 776
Bst2UI	CCWGG	4 cut(s)	650, 895, 1607, 2201
Bst4CI	ACNGT	6 cut(s)	870, 1003, 1577, 1641, 1850, 1933
Bst6I	CTCTTC	2 cut(s)	507, 1489
BstAPI	GCANNNNNTGC	1 cut(s)	2189
BstAUI	TGTACA	1 cut(s)	321
BstBI	TTCGAA	1 cut(s)	1330
BstC8I	GCNNGC	3 cut(s)	730, 2026, 2160
BstEII	GGTNACC	1 cut(s)	206
BstENI	CCTNNNNNAGG	1 cut(s)	419
BstF5I	GGATG	5 cut(s)	244, 829, 1225, 1504, 1522
BstHHI	GCGC	1 cut(s)	1589
BstMAI	GTCTC	4 cut(s)	676, 687, 746, 2240
BstMWI	GCNNNNNNNGC	6 cut(s)	239, 248, 324, 371, 2060, 2189
BstNI	CCWGG	4 cut(s)	650, 895, 1607, 2201
BstNSI	RCATGY	1 cut(s)	1794
BstPI	GGTNACC	1 cut(s)	206
BstSCI	CCNGG	4 cut(s)	648, 893, 1605, 2199
BstSFI	CTRYAG	2 cut(s)	228, 1080
BstV1I	GCAGC	5 cut(s)	214, 242, 1555, 2008, 2096
BstX2I	RGATCY	6 cut(s)	9, 937, 1027, 1129, 1627, 1726
BstYI	RGATCY	6 cut(s)	9, 937, 1027, 1129, 1627, 1726
BsuI	GTATCC	4 cut(s)	458, 574, 902, 1933
BsuRI	GGCC	4 cut(s)	195, 618, 1337, 1785
BtsCI	GGATG	5 cut(s)	244, 829, 1225, 1504, 1522
BtsI	GCAGTG	1 cut(s)	222
BtsIMutI	CAGTG	5 cut(s)	222, 483, 1133, 1582, 1837
Cac8I	GCNNGC	3 cut(s)	730, 2026, 2160
CaiI	CAGNNNCTG	1 cut(s)	410
CfoI	GCGC	1 cut(s)	1589
Cfr10I	RCCGGY	1 cut(s)	210
Cfr13I	GGNCC	2 cut(s)	301, 2197
Csp6I	GTAC	3 cut(s)	322, 1637, 1957
CspAI	ACCGGT	1 cut(s)	210
CviAII	CATG	8 cut(s)	1225, 1345, 1363, 1417, 1534, 1791, 1906, 1960
CviQI	GTAC	3 cut(s)	322, 1637, 1957
DraIII	CACNNNGTG	2 cut(s)	133, 548
EaeI	YGGCCR	2 cut(s)	616, 1783
Eam1104I	CTCTTC	2 cut(s)	507, 1489
EarI	CTCTTC	2 cut(s)	507, 1489
EciI	GGCGGA	1 cut(s)	29
Eco130I	CCWWGG	2 cut(s)	375, 776
Eco147I	AGGCCT	1 cut(s)	1337
Eco32I	GATATC	2 cut(s)	442, 1555
Eco47I	GGWCC	2 cut(s)	301, 2197
Eco57I	CTGAAG	2 cut(s)	824, 1604
Eco88I	CYCGRG	2 cut(s)	507, 2111
Eco91I	GGTNACC	1 cut(s)	206
EcoNI	CCTNNNNNAGG	1 cut(s)	419
EcoO65I	GGTNACC	1 cut(s)	206
EcoRI	GAATTC	1 cut(s)	1172
EcoRII	CCWGG	4 cut(s)	648, 893, 1605, 2199
EcoRV	GATATC	2 cut(s)	442, 1555
EcoT14I	CCWWGG	2 cut(s)	375, 776
ErhI	CCWWGG	2 cut(s)	375, 776
FaeI	CATG	8 cut(s)	1228, 1348, 1366, 1420, 1537, 1794, 1909, 1963
FalI	AAGNNNNNCTT	2 cut(s)	538, 570
FaqI	GGGAC	2 cut(s)	565, 1178
FatI	CATG	8 cut(s)	1224, 1344, 1362, 1416, 1533, 1790, 1905, 1959
FauI	CCCGC	1 cut(s)	794
FbaI	TGATCA	2 cut(s)	1227, 1506
FokI	GGATG	5 cut(s)	251, 816, 1232, 1511, 1529
FspBI	CTAG	3 cut(s)	729, 777, 2097
GlaI	GCGC	1 cut(s)	1588
GsaI	CCCAGC	2 cut(s)	1199, 2132
GsuI	CTGGAG	1 cut(s)	1628
HaeIII	GGCC	4 cut(s)	195, 618, 1337, 1785
HapII	CCGG	4 cut(s)	58, 87, 211, 388
HhaI	GCGC	1 cut(s)	1589
Hin1II	CATG	8 cut(s)	1228, 1348, 1366, 1420, 1537, 1794, 1909, 1963
Hin6I	GCGC	1 cut(s)	1587
HinP1I	GCGC	1 cut(s)	1587
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HindIII	AAGCTT	1 cut(s)	848
HinfI	GANTC	9 cut(s)	218, 471, 488, 505, 742, 769, 947, 1348, 2116
HpaI	GTTAAC	1 cut(s)	313
HpaII	CCGG	4 cut(s)	58, 87, 211, 388
HphI	GGTGA	6 cut(s)	443, 611, 1175, 1829, 1854, 2270
Hpy166II	GTNNAC	2 cut(s)	222, 313
Hpy8I	GTNNAC	2 cut(s)	222, 313
HpyAV	CCTTC	7 cut(s)	353, 415, 562, 1543, 1618, 1915, 1965
HpyCH4III	ACNGT	6 cut(s)	870, 1003, 1577, 1641, 1850, 1933
HpyCH4IV	ACGT	2 cut(s)	838, 1456
HpyF10VI	GCNNNNNNNGC	6 cut(s)	239, 248, 324, 371, 2060, 2189
HpySE526I	ACGT	2 cut(s)	838, 1456
Hsp92II	CATG	8 cut(s)	1228, 1348, 1366, 1420, 1537, 1794, 1909, 1963
HspAI	GCGC	1 cut(s)	1587
Ksp22I	TGATCA	2 cut(s)	1227, 1506
KspAI	GTTAAC	1 cut(s)	313
LguI	GCTCTTC	1 cut(s)	507
LmnI	GCTCC	2 cut(s)	390, 1210
Lsp1109I	GCAGC	5 cut(s)	214, 242, 1555, 2008, 2096
LweI	GCATC	7 cut(s)	229, 361, 580, 2035, 2041, 2071, 2221
MaeI	CTAG	3 cut(s)	729, 777, 2097
MaeII	ACGT	2 cut(s)	838, 1456
MaeIII	GTNAC	7 cut(s)	152, 206, 400, 599, 809, 1075, 1579
MbiI	CCGCTC	1 cut(s)	21
MfeI	CAATTG	1 cut(s)	537
MflI	RGATCY	6 cut(s)	9, 937, 1027, 1129, 1627, 1726
MhlI	GDGCHC	1 cut(s)	1998
MlsI	TGGCCA	2 cut(s)	618, 1785
MluCI	AATT	7 cut(s)	537, 607, 612, 1172, 1402, 1702, 1732
MluNI	TGGCCA	2 cut(s)	618, 1785
MlyI	GAGTC	2 cut(s)	227, 499
Mox20I	TGGCCA	2 cut(s)	618, 1785
MroXI	GAANNNNTTC	1 cut(s)	840
MscI	TGGCCA	2 cut(s)	618, 1785
MseI	TTAA	8 cut(s)	312, 575, 611, 1116, 1682, 1770, 1986, 2034
MslI	CAYNNNNRTG	1 cut(s)	500
Msp20I	TGGCCA	2 cut(s)	618, 1785
MspA1I	CMGCKG	2 cut(s)	944, 1199
MspI	CCGG	4 cut(s)	58, 87, 211, 388
MspR9I	CCNGG	4 cut(s)	650, 895, 1607, 2201
MunI	CAATTG	1 cut(s)	537
Mva1269I	GAATGC	2 cut(s)	644, 2023
MvaI	CCWGG	4 cut(s)	650, 895, 1607, 2201
MwoI	GCNNNNNNNGC	6 cut(s)	239, 248, 324, 371, 2060, 2189
NheI	GCTAGC	1 cut(s)	728
NlaIII	CATG	8 cut(s)	1228, 1348, 1366, 1420, 1537, 1794, 1909, 1963
NlaIV	GGNNCC	3 cut(s)	784, 939, 1131
NmeAIII	GCCGAG	1 cut(s)	2218
NmuCI	GTSAC	4 cut(s)	599, 809, 1075, 1579
NspI	RCATGY	1 cut(s)	1794
NspV	TTCGAA	1 cut(s)	1330
PceI	AGGCCT	1 cut(s)	1337
PciI	ACATGT	1 cut(s)	1790
PciSI	GCTCTTC	1 cut(s)	507
PctI	GAATGC	2 cut(s)	644, 2023
PdmI	GAANNNNTTC	1 cut(s)	840
PfeI	GAWTC	7 cut(s)	471, 488, 742, 769, 947, 1348, 2116
PfoI	TCCNGGA	2 cut(s)	1605, 2199
PinAI	ACCGGT	1 cut(s)	210
PleI	GAGTC	2 cut(s)	226, 499
PpsI	GAGTC	2 cut(s)	226, 499
PscI	ACATGT	1 cut(s)	1790
PshBI	ATTAAT	1 cut(s)	1986
Psp6I	CCWGG	4 cut(s)	648, 893, 1605, 2199
PspEI	GGTNACC	1 cut(s)	206
PspFI	CCCAGC	2 cut(s)	1195, 2128
PspGI	CCWGG	4 cut(s)	648, 893, 1605, 2199
PspN4I	GGNNCC	3 cut(s)	784, 939, 1131
PspPI	GGNCC	2 cut(s)	301, 2197
PstI	CTGCAG	1 cut(s)	232
PstNI	CAGNNNCTG	1 cut(s)	410
PsuI	RGATCY	6 cut(s)	9, 937, 1027, 1129, 1627, 1726
PvuII	CAGCTG	2 cut(s)	944, 1199
RsaI	GTAC	3 cut(s)	323, 1638, 1958
RsaNI	GTAC	3 cut(s)	322, 1637, 1957
RseI	CAYNNNNRTG	1 cut(s)	500
SapI	GCTCTTC	1 cut(s)	507
SaqAI	TTAA	8 cut(s)	312, 575, 611, 1116, 1682, 1770, 1986, 2034
Sau96I	GGNCC	2 cut(s)	301, 2197
ScaI	AGTACT	1 cut(s)	1638
SchI	GAGTC	2 cut(s)	227, 499
ScrFI	CCNGG	4 cut(s)	650, 895, 1607, 2201
SduI	GDGCHC	1 cut(s)	1998
SfaNI	GCATC	7 cut(s)	229, 361, 580, 2035, 2041, 2071, 2221
SfcI	CTRYAG	2 cut(s)	228, 1080
SfuI	TTCGAA	1 cut(s)	1330
SinI	GGWCC	2 cut(s)	301, 2197
SmiMI	CAYNNNNRTG	1 cut(s)	500
Sse9I	AATT	7 cut(s)	537, 607, 612, 1172, 1402, 1702, 1732
SseBI	AGGCCT	1 cut(s)	1337
SspMI	CTAG	3 cut(s)	729, 777, 2097
StuI	AGGCCT	1 cut(s)	1337
StyD4I	CCNGG	4 cut(s)	648, 893, 1605, 2199
StyI	CCWWGG	2 cut(s)	375, 776
TaaI	ACNGT	6 cut(s)	870, 1003, 1577, 1641, 1850, 1933
TaiI	ACGT	2 cut(s)	841, 1459
TaqI	TCGA	3 cut(s)	346, 930, 1330
TasI	AATT	7 cut(s)	537, 607, 612, 1172, 1402, 1702, 1732
TatI	WGTACW	3 cut(s)	321, 1636, 1956
TauI	GCSGC	6 cut(s)	21, 50, 68, 71, 251, 2225
TfiI	GAWTC	7 cut(s)	471, 488, 742, 769, 947, 1348, 2116
Tru1I	TTAA	8 cut(s)	312, 575, 611, 1116, 1682, 1770, 1986, 2034
Tru9I	TTAA	8 cut(s)	312, 575, 611, 1116, 1682, 1770, 1986, 2034
TscAI	CASTG	5 cut(s)	229, 490, 1140, 1582, 1837
TseFI	GTSAC	4 cut(s)	599, 809, 1075, 1579
TseI	GCWGC	5 cut(s)	227, 230, 1568, 2021, 2084
Tsp45I	GTSAC	4 cut(s)	599, 809, 1075, 1579
TspDTI	ATGAA	8 cut(s)	1053, 1134, 1264, 1433, 1533, 1550, 1552, 1934
TspGWI	ACGGA	1 cut(s)	434
TspRI	CASTG	5 cut(s)	229, 490, 1140, 1582, 1837
VpaK11BI	GGWCC	2 cut(s)	301, 2197
VspI	ATTAAT	1 cut(s)	1986
XagI	CCTNNNNNAGG	1 cut(s)	419
XapI	RAATTY	4 cut(s)	1172, 1402, 1702, 1732
XceI	RCATGY	1 cut(s)	1794
XcmI	CCANNNNNNNNNTGG	1 cut(s)	626
XmaJI	CCTAGG	1 cut(s)	776
XmnI	GAANNNNTTC	1 cut(s)	840
XspI	CTAG	3 cut(s)	729, 777, 2097
ZrmI	AGTACT	1 cut(s)	1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.