Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0009264

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG534000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGCCCCTATCCCTCTCCAGAAGCTTCCCAACCCATCCTTCTCTCTCTTTTATCAGAAACCCTACTAAAACCCCAGCCCTTGTTCCTCAGTCACAGTTGATCACTCTCTCTCGATCAATCTCAGCCACCATGCACAGGATCTCTCGCCGATCTCTCTCCGCTCTCCTCCGCCACGCCGCACCTTACCGAAGCTCCGCCACCCCAATCTCTCACTCCGCCTCGGTGGTGGGAGAGACGGATACCAAAGTCAGATGGCACTCGGTGTTAGTCGGTGGGAAGTGTAACCCTGCCAAATCCACAACTCAAATAAACTTGAAAAATGGCCTCTATTTCGGCAACCGGTATGAGTCCACTGCTGCAGCCTCGGATGCAACAGCCGCACCACCTGTTGAGAAATACGAGTATCAAGCTGAGGTTAGTCGCCTTATGGACCTCATTGTTAACAGCTTGTACAGCAACAAGGAGGTGTTCCTTCGAGAGCTTGTCAGCAATGCGAGTGATGCCTTGGACAAGCTCCGGTTTCTTAGTGTTACAGAACCTGACCTTTTGAAGGGTGGAGGTGAGCTTGATATCCGTATCCAGACTGATACTGACAATGGAATCATAAATATCACTGATTCTGGCATTGGAATGACTCGGGAAGAGCTTGTGGATTGTTTGGGAACAATTGCACAAAGTGGGACTTCAAAGTTCTTGAAGGCATTAAAGGATACTAAAGATGCTGGTGGTGACAGCAATTTAATTGGTCAGTTTGGTGTTGGCTTTTACTCCGCATTCCTGGTTGCAGATCGGGTTGTTGTCTCTACAAAGTCTCCGAAATCTGACAAACAATATGTATGGCAAGGAGAGGCAAATGCTAGCTCTTATACGATTCAGGAGGAGACTGACCCTGAGAAGATTCTTCCTAGGGGAACCCGCTTGACCTTGTATCTGAAGCGTGACGACAAAGGTTTTGCTCATCCAGAACGTATTCAGAAGCTTGTGAAAAACTATTCACAGTTTGTTTCTTTTCCTATATACACGTGGCAGGAAAAGGGATACACTAAAGAGGTTGAGGTTGATGAGGATCCAGCTGAATCCAAAAAAGATGAGCAAGATGACAAGACTGAGAAGAAGAAGAAAACTAAGACAGTTGTTGAGAAATACTGGGATTGGGATCTCACTAATGAAACACAACCAATATGGCTTCGCAATCCTAAAGAAGTCACTACAGAGGATTACAATGAGTTCTACAAGAATACTTTTAATGAATACTTGGATCCACTGGCTTCTTCACACTTTACAACAGAGGGTGAAGTAGAATTCAGGTCTGTATTATATGTCCCAGCTGTTGCTCCTATGGGAAAGGATGACATGATCAATCCCAAGACAAAAAATATAAGGCTTTATGTGAAACGGGTGTTCATTTCAGATGACTTTGATGGAGAACTGTTCCCACGATACTTGAGCTTCATCAAAGGTGTTGTGGATTCAAATGATCTTCCCCTCAACGTCTCACGTGAAATTCTTCAGGAGAGTCGCATTGTGCGGATTATGAGGAAGCGTTTAGTTCGAAAGGCCTTTGACATGATTCTGGGAATATCCATGAGTGAAAACAGAGAGGATTATGAAAAGTTCTGGGAAAATTTTGGCAAACACTTGAAACTGGGTTGCATTGAAGATCGTGAAAATCATAAACGTCTTGCCCCATTGCTTAGATTTTTCTCTTCCCAAAGTGAGGATGTTATGATCAGCTTGGATGAATATGTTGAGAACATGAAACCTGAGCAGAAGGATATCTATTTCATTGCTGCTGACAGTGTGACAAGCGCAAGTAATACGCCATTCCTGGAGAAACTTATTCAGAAGGATCTTGAAGTACTGTATTTAGTTGATCCTATTGATGAGGTTGCCATTACAAACCTAAAATCATACAAGGAAAAGAATTTTGTTGATATTAGCAAGGAAGATCTGAATTTAGGGGATAAGAATGAGGAAAAAGAAAAGGAGATTAAGCAGGAGTTTGGCCAAACATGTGATTGGATCAAGAAGCGTTTGGGTGATAAAGTTGCCAGTGTTCAGATTTCAAACCGTCTTAGTACATCACCCTGCGTTCTTGTATCTGGGAAGTTCGGTTGGTCTGCCAACATGGAGAGGTTGATGAAGGCACAAACTGTTGGGGATACTTCTAGCTTAGAGTACATGAGAGGCAGAAGGGTCTTTGAGATTAATCCTGAGCACCCAATCATTCAAAACTTGAATGCTGCAAGTAGAGTTAATCCAGACGATGCAGATGCAATGAGAGCTATTGATCTTTTGTATGATGCAGCTTTGGTTTCTAGCGGTTTTACTCCTGAGAATCCAGCAGAGCTGGGTGGAAAGATTTATGAGATGATGGGGTTGGCTCTTTCGGGGAAATGGTCTGCACCTGTTGCCGAGGTCCAGGAGGTTCAGCATCAAGAAGCCGCACCACAGCACAACAGCACGGAGACATTAGATGGTGAGGTGGTTGAGCCAGTCCAAGCTGGTAGCCAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008144 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0017076 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

839

Amino Acids

94.68

Weight (kDa)

5.48

Isoelectric Point (pI)

37.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	155 - 286	7.1e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c	PF02518	156 - 313	3.2e-06	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90	PF00183	318 - 819	2.9e-194	Hsp90 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07770 AT3G07770 AT3G07770
fragaria_vesca	FvH4_6g41100 FvH4_6g41100
malus_domestica	MD09G1122200.v1.1 MD17G1113200.v1.1
prunus_persica	Prupe.3G201400_v2.0.a1
pyrus_communis	pycom09g04650 pycom17g10480
rosa_chinensis	RchiOBHm_Chr2g0156661
rosa_laevigata	RLG00000020929
rosa_multiflora	Rmu_sc0001130.1_g000001 Rmu_sc0018228.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092860
rosa_rugosa	Rorug02G0455200
rosa_samantha	Rh2AG520800 Rh2BG534000 Rh2CG505800 Rh2DG542800
rosa_wichuraiana	Rw0G013720 Rw2G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	161
AclWI	GGATC	9 cut(s)	146, 1061, 1074, 1164, 1253, 1266, 1857, 1868, 2030
AcoI	YGGCCR	1 cut(s)	2005
AcsI	RAATTY	5 cut(s)	1301, 1503, 1624, 1924, 1954
AcuI	CTGAAG	2 cut(s)	953, 1493
AcvI	CACGTG	2 cut(s)	1023, 1499
AdeI	CACNNNGTG	2 cut(s)	262, 677
AfaI	GTAC	4 cut(s)	452, 1860, 2080, 2180
AfiI	CCNNNNNNNGG	3 cut(s)	135, 550, 1717
AflIII	ACRYGT	2 cut(s)	1020, 2012
AgeI	ACCGGT	1 cut(s)	339
AjnI	CCWGG	3 cut(s)	777, 1827, 2421
AjuI	GAANNNNNNNTTGG	2 cut(s)	22, 54
Alw21I	GWGCWC	1 cut(s)	2220
Alw26I	GTCTC	6 cut(s)	227, 805, 816, 875, 1498, 2462
AlwI	GGATC	9 cut(s)	146, 1061, 1074, 1164, 1253, 1266, 1857, 1868, 2030
AlwNI	CAGNNNCTG	1 cut(s)	539
Ama87I	CYCGRG	1 cut(s)	636
AoxI	GGCC	3 cut(s)	322, 1557, 2005
ApeKI	GCWGC	5 cut(s)	356, 359, 1790, 2243, 2306
ApoI	RAATTY	5 cut(s)	1301, 1503, 1624, 1924, 1954
ArsI	GACNNNNNNTTYG	2 cut(s)	935, 967
AseI	ATTAAT	1 cut(s)	2208
AsiGI	ACCGGT	1 cut(s)	339
Asp700I	GAANNNNTTC	2 cut(s)	969, 1506
AspA2I	CCTAGG	1 cut(s)	905
AspLEI	GCGC	1 cut(s)	1811
AspS9I	GGNCC	2 cut(s)	430, 2419
AsuHPI	GGTGA	6 cut(s)	572, 740, 1304, 2051, 2076, 2492
AsuII	TTCGAA	1 cut(s)	1552
AsuNHI	GCTAGC	1 cut(s)	857
AvaI	CYCGRG	1 cut(s)	636
AvaII	GGWCC	2 cut(s)	430, 2419
AvrII	CCTAGG	1 cut(s)	905
BaeI	ACNNNNGTAYC	2 cut(s)	231, 264
BalI	TGGCCA	1 cut(s)	2007
BamHI	GGATCC	2 cut(s)	1066, 1258
BbrPI	CACGTG	2 cut(s)	1023, 1499
Bbv12I	GWGCWC	1 cut(s)	2220
BbvCI	CCTCAGC	1 cut(s)	411
BbvI	GCAGC	5 cut(s)	343, 371, 1777, 2230, 2318
BccI	CCATC	5 cut(s)	42, 246, 1415, 2368, 2471
BcgI	CGANNNNNNTGC	2 cut(s)	2255, 2289
BciT130I	CCWGG	3 cut(s)	779, 1829, 2423
BciVI	GTATCC	5 cut(s)	232, 587, 703, 1031, 2155
BclI	TGATCA	3 cut(s)	99, 1356, 1728
BcoDI	GTCTC	6 cut(s)	227, 805, 816, 875, 1498, 2462
BfaI	CTAG	4 cut(s)	858, 906, 2169, 2319
BfmI	CTRYAG	2 cut(s)	357, 1209
BfuI	GTATCC	5 cut(s)	232, 587, 703, 1031, 2155
BglII	AGATCT	1 cut(s)	1948
BisI	GCNGC	8 cut(s)	177, 357, 360, 378, 1791, 2244, 2307, 2445
BlnI	CCTAGG	1 cut(s)	905
BlsI	GCNGC	8 cut(s)	178, 358, 361, 379, 1792, 2245, 2308, 2446
BmcAI	AGTACT	1 cut(s)	1860
Bme1390I	CCNGG	3 cut(s)	779, 1829, 2423
Bme18I	GGWCC	2 cut(s)	430, 2419
BmeT110I	CYCGRG	1 cut(s)	636
BmgT120I	GGNCC	2 cut(s)	430, 2419
BmiI	GGNNCC	3 cut(s)	913, 1068, 1260
BmrFI	CCNGG	3 cut(s)	779, 1829, 2423
BmrI	ACTGGG	2 cut(s)	1156, 1655
BmsI	GCATC	7 cut(s)	358, 490, 709, 2257, 2263, 2293, 2443
BmtI	GCTAGC	1 cut(s)	861
BmuI	ACTGGG	2 cut(s)	1156, 1655
BpmI	CTGGAG	1 cut(s)	1850
Bpu10I	CCTNAGC	3 cut(s)	411, 1764, 2214
Bpu14I	TTCGAA	1 cut(s)	1552
BpuEI	CTTGAG	1 cut(s)	1465
BsaAI	YACGTR	2 cut(s)	1023, 1499
BsaBI	GATNNNNATC	2 cut(s)	1065, 1155
BsaJI	CCNNGG	5 cut(s)	219, 363, 504, 905, 2415
BsaWI	WCCGGW	2 cut(s)	339, 516
BsaXI	ACNNNNNCTCC	4 cut(s)	176, 206, 796, 826
Bsc4I	CCNNNNNNNGG	3 cut(s)	135, 550, 1717
Bse118I	RCCGGY	1 cut(s)	339
Bse1I	ACTGG	5 cut(s)	1151, 1269, 1650, 2052, 2495
Bse3DI	GCAATG	4 cut(s)	496, 1688, 1785, 2283
Bse8I	GATNNNNATC	2 cut(s)	1065, 1155
BseBI	CCWGG	3 cut(s)	779, 1829, 2423
BseDI	CCNNGG	5 cut(s)	219, 363, 504, 905, 2415
BseGI	GGATG	6 cut(s)	34, 373, 958, 1354, 1726, 1744
BseJI	GATNNNNATC	2 cut(s)	1065, 1155
BseLI	CCNNNNNNNGG	3 cut(s)	135, 550, 1717
BseMI	GCAATG	4 cut(s)	496, 1688, 1785, 2283
BseMII	CTCAG	8 cut(s)	101, 135, 402, 882, 1098, 1755, 2205, 2325
BseNI	ACTGG	5 cut(s)	1151, 1269, 1650, 2052, 2495
BseRI	GAGGAG	2 cut(s)	155, 893
BseXI	GCAGC	5 cut(s)	343, 371, 1777, 2230, 2318
BseYI	CCCAGC	3 cut(s)	73, 1324, 2350
BsgI	GTGCAG	1 cut(s)	2388
BshFI	GGCC	3 cut(s)	324, 1559, 2007
BshTI	ACCGGT	1 cut(s)	339
BsiHKAI	GWGCWC	1 cut(s)	2220
BsiHKCI	CYCGRG	1 cut(s)	636
BsiSI	CCGG	2 cut(s)	340, 517
BslFI	GGGAC	2 cut(s)	694, 1307
BslI	CCNNNNNNNGG	3 cut(s)	135, 550, 1717
BsmAI	GTCTC	6 cut(s)	227, 805, 816, 875, 1498, 2462
BsmBI	CGTCTC	2 cut(s)	227, 1498
BsmFI	GGGAC	2 cut(s)	694, 1307
BsmI	GAATGC	2 cut(s)	773, 2245
BsnI	GGCC	3 cut(s)	324, 1559, 2007
BsoBI	CYCGRG	1 cut(s)	636
Bsp119I	TTCGAA	1 cut(s)	1552
Bsp1286I	GDGCHC	1 cut(s)	2220
Bsp1407I	TGTACA	1 cut(s)	450
BspANI	GGCC	3 cut(s)	324, 1559, 2007
BspCNI	CTCAG	8 cut(s)	100, 134, 403, 883, 1099, 1756, 2206, 2326
BspLI	GGNNCC	3 cut(s)	913, 1068, 1260
BspMAI	CTGCAG	1 cut(s)	361
BspOI	GCTAGC	1 cut(s)	861
BspPI	GGATC	9 cut(s)	146, 1061, 1074, 1164, 1253, 1266, 1857, 1868, 2030
BspQI	GCTCTTC	1 cut(s)	636
BspT104I	TTCGAA	1 cut(s)	1552
BsrBI	CCGCTC	1 cut(s)	161
BsrDI	GCAATG	4 cut(s)	496, 1688, 1785, 2283
BsrFI	RCCGGY	1 cut(s)	339
BsrGI	TGTACA	1 cut(s)	450
BsrI	ACTGG	5 cut(s)	1151, 1269, 1650, 2052, 2495
BssAI	RCCGGY	1 cut(s)	339
BssECI	CCNNGG	5 cut(s)	219, 363, 504, 905, 2415
BssT1I	CCWWGG	2 cut(s)	504, 905
Bst2UI	CCWGG	3 cut(s)	779, 1829, 2423
Bst4CI	ACNGT	8 cut(s)	96, 999, 1132, 1431, 1799, 1863, 2072, 2155
Bst6I	CTCTTC	2 cut(s)	636, 1711
BstAPI	GCANNNNNTGC	1 cut(s)	2411
BstAUI	TGTACA	1 cut(s)	450
BstBAI	YACGTR	2 cut(s)	1023, 1499
BstBI	TTCGAA	1 cut(s)	1552
BstC8I	GCNNGC	1 cut(s)	859
BstENI	CCTNNNNNAGG	1 cut(s)	548
BstF5I	GGATG	6 cut(s)	34, 373, 958, 1354, 1726, 1744
BstHHI	GCGC	1 cut(s)	1811
BstMAI	GTCTC	6 cut(s)	227, 805, 816, 875, 1498, 2462
BstMWI	GCNNNNNNNGC	6 cut(s)	368, 377, 453, 500, 2282, 2411
BstNI	CCWGG	3 cut(s)	779, 1829, 2423
BstNSI	RCATGY	1 cut(s)	2016
BstSCI	CCNGG	3 cut(s)	777, 1827, 2421
BstSFI	CTRYAG	2 cut(s)	357, 1209
BstV1I	GCAGC	5 cut(s)	343, 371, 1777, 2230, 2318
BstX2I	RGATCY	6 cut(s)	138, 1066, 1156, 1258, 1849, 1948
BstYI	RGATCY	6 cut(s)	138, 1066, 1156, 1258, 1849, 1948
BsuI	GTATCC	5 cut(s)	232, 587, 703, 1031, 2155
BsuRI	GGCC	3 cut(s)	324, 1559, 2007
BtsCI	GGATG	6 cut(s)	34, 373, 958, 1354, 1726, 1744
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	5 cut(s)	351, 612, 1262, 1804, 2059
Cac8I	GCNNGC	1 cut(s)	859
CaiI	CAGNNNCTG	1 cut(s)	539
CfoI	GCGC	1 cut(s)	1811
Cfr10I	RCCGGY	1 cut(s)	339
Cfr13I	GGNCC	2 cut(s)	430, 2419
Csp6I	GTAC	4 cut(s)	451, 1859, 2079, 2179
CspAI	ACCGGT	1 cut(s)	339
CspCI	CAANNNNNGTGG	2 cut(s)	1425, 1460
CviAII	CATG	8 cut(s)	130, 1354, 1567, 1585, 1756, 2013, 2128, 2182
CviQI	GTAC	4 cut(s)	451, 1859, 2079, 2179
DraIII	CACNNNGTG	2 cut(s)	262, 677
EaeI	YGGCCR	1 cut(s)	2005
Eam1104I	CTCTTC	2 cut(s)	636, 1711
EarI	CTCTTC	2 cut(s)	636, 1711
EciI	GGCGGA	3 cut(s)	158, 184, 205
Eco130I	CCWWGG	2 cut(s)	504, 905
Eco147I	AGGCCT	1 cut(s)	1559
Eco32I	GATATC	2 cut(s)	571, 1777
Eco47I	GGWCC	2 cut(s)	430, 2419
Eco57I	CTGAAG	2 cut(s)	953, 1493
Eco72I	CACGTG	2 cut(s)	1023, 1499
Eco88I	CYCGRG	1 cut(s)	636
EcoNI	CCTNNNNNAGG	1 cut(s)	548
EcoRI	GAATTC	1 cut(s)	1301
EcoRII	CCWGG	3 cut(s)	777, 1827, 2421
EcoRV	GATATC	2 cut(s)	571, 1777
EcoT14I	CCWWGG	2 cut(s)	504, 905
ErhI	CCWWGG	2 cut(s)	504, 905
Esp3I	CGTCTC	2 cut(s)	227, 1498
FaeI	CATG	8 cut(s)	133, 1357, 1570, 1588, 1759, 2016, 2131, 2185
FalI	AAGNNNNNCTT	2 cut(s)	667, 699
FaqI	GGGAC	2 cut(s)	694, 1307
FatI	CATG	8 cut(s)	129, 1353, 1566, 1584, 1755, 2012, 2127, 2181
FauI	CCCGC	1 cut(s)	923
FbaI	TGATCA	3 cut(s)	99, 1356, 1728
Fnu4HI	GCNGC	8 cut(s)	177, 357, 360, 378, 1791, 2244, 2307, 2445
FokI	GGATG	6 cut(s)	21, 380, 945, 1361, 1733, 1751
Fsp4HI	GCNGC	8 cut(s)	177, 357, 360, 378, 1791, 2244, 2307, 2445
FspBI	CTAG	4 cut(s)	858, 906, 2169, 2319
GlaI	GCGC	1 cut(s)	1810
GluI	GCNGC	8 cut(s)	177, 357, 360, 378, 1791, 2244, 2307, 2445
GsaI	CCCAGC	3 cut(s)	77, 1328, 2354
GsuI	CTGGAG	1 cut(s)	1850
HaeIII	GGCC	3 cut(s)	324, 1559, 2007
HapII	CCGG	2 cut(s)	340, 517
HhaI	GCGC	1 cut(s)	1811
Hin1II	CATG	8 cut(s)	133, 1357, 1570, 1588, 1759, 2016, 2131, 2185
Hin6I	GCGC	1 cut(s)	1809
HinP1I	GCGC	1 cut(s)	1809
HincII	GTYRAC	1 cut(s)	442
HindII	GTYRAC	1 cut(s)	442
HindIII	AAGCTT	2 cut(s)	22, 977
HpaI	GTTAAC	1 cut(s)	442
HpaII	CCGG	2 cut(s)	340, 517
HphI	GGTGA	6 cut(s)	572, 740, 1304, 2051, 2076, 2492
Hpy166II	GTNNAC	2 cut(s)	351, 442
Hpy8I	GTNNAC	2 cut(s)	351, 442
HpyAV	CCTTC	8 cut(s)	48, 482, 544, 691, 1765, 1840, 2137, 2187
HpyCH4III	ACNGT	8 cut(s)	96, 999, 1132, 1431, 1799, 1863, 2072, 2155
HpyCH4IV	ACGT	5 cut(s)	967, 1022, 1491, 1498, 1678
HpyF10VI	GCNNNNNNNGC	6 cut(s)	368, 377, 453, 500, 2282, 2411
HpySE526I	ACGT	5 cut(s)	967, 1022, 1491, 1498, 1678
Hsp92II	CATG	8 cut(s)	133, 1357, 1570, 1588, 1759, 2016, 2131, 2185
HspAI	GCGC	1 cut(s)	1809
Ksp22I	TGATCA	3 cut(s)	99, 1356, 1728
KspAI	GTTAAC	1 cut(s)	442
LguI	GCTCTTC	1 cut(s)	636
LmnI	GCTCC	3 cut(s)	197, 519, 1339
Lsp1109I	GCAGC	5 cut(s)	343, 371, 1777, 2230, 2318
LweI	GCATC	7 cut(s)	358, 490, 709, 2257, 2263, 2293, 2443
MaeI	CTAG	4 cut(s)	858, 906, 2169, 2319
MaeII	ACGT	5 cut(s)	967, 1022, 1491, 1498, 1678
MaeIII	GTNAC	7 cut(s)	90, 281, 529, 728, 938, 1204, 1801
MbiI	CCGCTC	1 cut(s)	161
MfeI	CAATTG	1 cut(s)	666
MflI	RGATCY	6 cut(s)	138, 1066, 1156, 1258, 1849, 1948
MhlI	GDGCHC	1 cut(s)	2220
MlsI	TGGCCA	1 cut(s)	2007
MluCI	AATT	8 cut(s)	666, 736, 741, 1301, 1503, 1624, 1924, 1954
MluNI	TGGCCA	1 cut(s)	2007
MlyI	GAGTC	3 cut(s)	356, 628, 1525
Mox20I	TGGCCA	1 cut(s)	2007
MroXI	GAANNNNTTC	2 cut(s)	969, 1506
MscI	TGGCCA	1 cut(s)	2007
MseI	TTAA	7 cut(s)	441, 704, 740, 1245, 1992, 2208, 2256
MslI	CAYNNNNRTG	1 cut(s)	629
Msp20I	TGGCCA	1 cut(s)	2007
MspA1I	CMGCKG	2 cut(s)	1073, 1328
MspI	CCGG	2 cut(s)	340, 517
MspR9I	CCNGG	3 cut(s)	779, 1829, 2423
MunI	CAATTG	1 cut(s)	666
Mva1269I	GAATGC	2 cut(s)	773, 2245
MvaI	CCWGG	3 cut(s)	779, 1829, 2423
MwoI	GCNNNNNNNGC	6 cut(s)	368, 377, 453, 500, 2282, 2411
NheI	GCTAGC	1 cut(s)	857
NlaIII	CATG	8 cut(s)	133, 1357, 1570, 1588, 1759, 2016, 2131, 2185
NlaIV	GGNNCC	3 cut(s)	913, 1068, 1260
NmeAIII	GCCGAG	1 cut(s)	2440
NmuCI	GTSAC	5 cut(s)	90, 728, 938, 1204, 1801
NspI	RCATGY	1 cut(s)	2016
NspV	TTCGAA	1 cut(s)	1552
PceI	AGGCCT	1 cut(s)	1559
PciI	ACATGT	1 cut(s)	2012
PciSI	GCTCTTC	1 cut(s)	636
PctI	GAATGC	2 cut(s)	773, 2245
PdmI	GAANNNNTTC	2 cut(s)	969, 1506
PfeI	GAWTC	8 cut(s)	600, 617, 871, 898, 1076, 1469, 1570, 2338
PfoI	TCCNGGA	2 cut(s)	1827, 2421
PinAI	ACCGGT	1 cut(s)	339
PkrI	GCNGC	8 cut(s)	178, 358, 361, 379, 1792, 2245, 2308, 2446
PleI	GAGTC	3 cut(s)	355, 628, 1524
PmaCI	CACGTG	2 cut(s)	1023, 1499
PmlI	CACGTG	2 cut(s)	1023, 1499
PpsI	GAGTC	3 cut(s)	355, 628, 1524
Ppu21I	YACGTR	2 cut(s)	1023, 1499
PscI	ACATGT	1 cut(s)	2012
PshBI	ATTAAT	1 cut(s)	2208
Psp6I	CCWGG	3 cut(s)	777, 1827, 2421
PspCI	CACGTG	2 cut(s)	1023, 1499
PspFI	CCCAGC	3 cut(s)	73, 1324, 2350
PspGI	CCWGG	3 cut(s)	777, 1827, 2421
PspN4I	GGNNCC	3 cut(s)	913, 1068, 1260
PspPI	GGNCC	2 cut(s)	430, 2419
PstI	CTGCAG	1 cut(s)	361
PstNI	CAGNNNCTG	1 cut(s)	539
PsuI	RGATCY	6 cut(s)	138, 1066, 1156, 1258, 1849, 1948
PvuII	CAGCTG	2 cut(s)	1073, 1328
RsaI	GTAC	4 cut(s)	452, 1860, 2080, 2180
RsaNI	GTAC	4 cut(s)	451, 1859, 2079, 2179
RseI	CAYNNNNRTG	1 cut(s)	629
SapI	GCTCTTC	1 cut(s)	636
SaqAI	TTAA	7 cut(s)	441, 704, 740, 1245, 1992, 2208, 2256
SatI	GCNGC	8 cut(s)	177, 357, 360, 378, 1791, 2244, 2307, 2445
Sau96I	GGNCC	2 cut(s)	430, 2419
ScaI	AGTACT	1 cut(s)	1860
SchI	GAGTC	3 cut(s)	356, 628, 1525
ScrFI	CCNGG	3 cut(s)	779, 1829, 2423
SduI	GDGCHC	1 cut(s)	2220
SfaNI	GCATC	7 cut(s)	358, 490, 709, 2257, 2263, 2293, 2443
SfcI	CTRYAG	2 cut(s)	357, 1209
SfuI	TTCGAA	1 cut(s)	1552
SinI	GGWCC	2 cut(s)	430, 2419
SmiMI	CAYNNNNRTG	1 cut(s)	629
SmlI	CTYRAG	1 cut(s)	1444
SmoI	CTYRAG	1 cut(s)	1444
Sse9I	AATT	8 cut(s)	666, 736, 741, 1301, 1503, 1624, 1924, 1954
SseBI	AGGCCT	1 cut(s)	1559
SspMI	CTAG	4 cut(s)	858, 906, 2169, 2319
StuI	AGGCCT	1 cut(s)	1559
StyD4I	CCNGG	3 cut(s)	777, 1827, 2421
StyI	CCWWGG	2 cut(s)	504, 905
TaaI	ACNGT	8 cut(s)	96, 999, 1132, 1431, 1799, 1863, 2072, 2155
TaiI	ACGT	5 cut(s)	970, 1025, 1494, 1501, 1681
TaqI	TCGA	3 cut(s)	112, 475, 1552
TasI	AATT	8 cut(s)	666, 736, 741, 1301, 1503, 1624, 1924, 1954
TatI	WGTACW	4 cut(s)	450, 1858, 2078, 2178
TauI	GCSGC	3 cut(s)	179, 380, 2447
TfiI	GAWTC	8 cut(s)	600, 617, 871, 898, 1076, 1469, 1570, 2338
Tru1I	TTAA	7 cut(s)	441, 704, 740, 1245, 1992, 2208, 2256
Tru9I	TTAA	7 cut(s)	441, 704, 740, 1245, 1992, 2208, 2256
TscAI	CASTG	5 cut(s)	358, 619, 1269, 1804, 2059
TseFI	GTSAC	5 cut(s)	90, 728, 938, 1204, 1801
TseI	GCWGC	5 cut(s)	356, 359, 1790, 2243, 2306
Tsp45I	GTSAC	5 cut(s)	90, 728, 938, 1204, 1801
TspDTI	ATGAA	9 cut(s)	1182, 1263, 1393, 1441, 1623, 1755, 1772, 1774, 2156
TspGWI	ACGGA	3 cut(s)	251, 563, 2480
TspRI	CASTG	5 cut(s)	358, 619, 1269, 1804, 2059
VpaK11BI	GGWCC	2 cut(s)	430, 2419
VspI	ATTAAT	1 cut(s)	2208
XagI	CCTNNNNNAGG	1 cut(s)	548
XapI	RAATTY	5 cut(s)	1301, 1503, 1624, 1924, 1954
XceI	RCATGY	1 cut(s)	2016
XmaJI	CCTAGG	1 cut(s)	905
XmnI	GAANNNNTTC	2 cut(s)	969, 1506
XspI	CTAG	4 cut(s)	858, 906, 2169, 2319
ZrmI	AGTACT	1 cut(s)	1860

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.