Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009264

Physical Location & Seq

Genomic Coordinates Forward (+)

20984688 .. 20990399

Gene Structure 5712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G201400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGCATAGGCTTCCTCGACGCTCCGTCTCCGCTATCCTGCGCCACGGCGGCGCACGTCACCGGACCACCGCTGCTCCAATCTCCTGCGCTTCTACCCACTTGGGTTCGGTGGGAGAAACTGATGCCAAAGTGAGATGGCACTCAGCGTTGGCCTCTGGGAAGTTTAACCCTTGCAAACCCACGGCTCAGTTTGCCTCCAACAATGGACTGTGCTTTGGCAACCGGTTTGAGTCCACTGCTGCAGCCTCTGATGCATCGGCCGAGCCTCCCGCTGAGAGATTCGAGTATCAAGCTGAAGTCAATCGCCTCATGGACCTCATTGTTAACAGCTTGTACAGTAACAAGGAGGTGTTTCTTAGAGAGCTTATCAGCAATGCAAGTGATGCCTTGGACAAGCTCAGGTTTCTCAGTGTTACGGAGCCTGATCTTTTGAAGGGTGGAGGTGATCTTGATATCCGTATCCAGACTGATAAAGACAATGGGATCATACATATCATTGATTCTGGTATTGGTATGACTCGGCAAGAACTTGTTGACTGCCTGGGAACAATTGCACAAAGTGGGACCGCAAAGTTCTCAAAGTTGTTGAAGGATAGTAAAGATGCGGGTGGTGACAACAATTTGATTGGTCAGTTTGGTGTTGGCTTTTACTCGGCATTCCTTGTTGCTGATCGGGTTGTCGTCTCCACAAAGAGCCCAAAATCTGACAAACAATATGTATGGCAAGGAGAGGCAAATGCTAGCTCGTATACAATTCAGGAGGAGACTGACCCTGAGAAGCTTATTCCTAGAGGAACCCGCCTGAGCTTGTATCTCAAGCGTGATGACAAAGGTTTTGCTGTTCCAGAACGGATACAGAAGCTTGTGAAAAACTATTCACAGTTTGTTTCTTTTCCTATATACACTTGGCAGGAAAAGGGGTACACTAAAGAGGTTGAGGTTGATGAGGATCCAGCTGAATCCAAAAAGGATGGAGAAAATGAGAAAACCGAGGTACAAAAGAAAAAAACGAAGACTGTTGTTGAGAAATACTGGGATTGGGAGCTCACTAATGAGACACAACCAATATGGCTTCGCAATCCTAAGGAAGTCACTACGGAGGACTACAATGAGTTCTACAAGAAAACTTTTAATGAATACTTGGATCCACTAGCATCTTCGCATTTCACAACAGAGGGTGAAGTAGAATTCAGGTCTATTCTGTATGTTCCAGCGGTTGCTCCTAGGGGGAAGGATGACATAGTCAACTCCAAGACAAAAAATATAAGCCTCTATGTGAAAAGGGTGTTCATTTCAGATGATTTTGATGGAGAACTGTTCCCTCGATACTTGAGCTTCGTCAAAGGTGTTGTGGACTCAAATGATCTTCCACTCAATGTTTCACGTGAAATTCTTCAGGAGAGTCGTATTGTACGGATTATGAGGAAGCGCTTGGTTCGGAAGGCCTTTGATATGATCCTGGGAATATCCATGAGTGAGGACAGAGCAGATTATGAAAAGTTCTTCGAAAATTTTGGAAAGCATTTGAAACTGGGTTGCATTGAAGATCGTGAAAATCATAAGCGTATTGCTCCATTGCTTAGATTTTTCTCTTCCCAAAGTGAGGATGTGATGATCAGCTTGGATGAATATCTTGAGAACATGAAACCTGAGCAGAAGGGTATCTATTACATTGCTTCTGATAGTGTAGAAAGCGCAAGCAATACACCATTCCTGGAAAAACTTCTTGAGAAGAATTTCGAAGTGTTGTACTTAGTTGATCCAATTGATGAGGTTGCCATCCAGAACCTGGAATCTTACAAGGAGAAGAAATTCCTTGATATTAGCAAGGAAGATCTGGATTTAGGGGATAAGAATGAGGAAAAAGAAAAGGAGATTAAGCAGGAATATGGCCAAACATGTGATTGGATTAAGAAACGTTTGGGTGACAAAGTTGCCAGTGTTCAGATTTCAAACCGTCTTAGCTCGTCACCCTGCGTTCTTGTATCTGGGAAGTTTGGTTGGTCTGCCAACATGGAGAGGTTGATGAAGGCACAAACTGTTGGTGATACTTCTAGCCTTGAGTTTATGAGAGGCAGGAGGGTGTTTGAGATTAATCCTGAGCACCCAATCATTCAAAACTTGAATGCTGCAAGCAAGATCAACCCGGATGATGAAGATGCTATTAGAGCTATTGATCTTTTGTATGATACAGCTTTGGTGTCTAGTGGTTTTACCCCTGAGAATCCAGCACAGCTGGGTGGAAAGATATATGAGATGATGGGTTTGGCTCTTTCTGGGAAATGGTCTACACCTGTCGCCGAGGTTCAGCAACCAGGACGCCAACACCACAACCCAGAGACGTTAGAGGCTGAGGTTCAGCATCCAGGAACCCCACATCACAACACCAAGATATTAGAGGCTGAGGTGGTTGAGCCTGTTGAAGCTGGTACCCAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008144 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0017076 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

814

Amino Acids

91.81

Weight (kDa)

5.46

Isoelectric Point (pI)

34.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07770 AT3G07770 AT3G07770
fragaria_vesca	FvH4_6g41100 FvH4_6g41100
malus_domestica	MD09G1122200.v1.1 MD17G1113200.v1.1
prunus_persica	Prupe.3G201400_v2.0.a1
pyrus_communis	pycom09g04650 pycom17g10480
rosa_chinensis	RchiOBHm_Chr2g0156661
rosa_laevigata	RLG00000020929
rosa_multiflora	Rmu_sc0001130.1_g000001 Rmu_sc0018228.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092860
rosa_rugosa	Rorug02G0455200
rosa_samantha	Rh2AG520800 Rh2BG534000 Rh2CG505800 Rh2DG542800
rosa_wichuraiana	Rw0G013720 Rw2G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2429
AccB1I	GGYRCC	1 cut(s)	2429
AccB7I	CCANNNNNTGG	1 cut(s)	1789
AccI	GTMKAC	2 cut(s)	749, 2288
AciI	CCGC	8 cut(s)	30, 48, 69, 270, 567, 605, 799, 1214
AclI	AACGTT	1 cut(s)	1918
AclWI	GGATC	7 cut(s)	491, 944, 957, 1139, 1152, 1450, 1754
AcoI	YGGCCR	2 cut(s)	258, 1891
AcsI	RAATTY	5 cut(s)	1187, 1389, 1510, 1735, 1811
AcuI	CTGAAG	2 cut(s)	315, 1379
AcvI	CACGTG	1 cut(s)	1385
AcyI	GRCGYC	1 cut(s)	2320
AdeI	CACNNNGTG	1 cut(s)	560
AfaI	GTAC	6 cut(s)	335, 923, 996, 1413, 1751, 2431
AfeI	AGCGCT	1 cut(s)	1430
AfiI	CCNNNNNNNGG	2 cut(s)	1603, 1789
AflIII	ACRYGT	1 cut(s)	1898
AgeI	ACCGGT	1 cut(s)	222
AgsI	TTSAA	8 cut(s)	433, 589, 1528, 1544, 1953, 2117, 2125, 2423
AhdI	GACNNNNNGTC	1 cut(s)	23
AjiI	CACGTC	1 cut(s)	56
AjnI	CCWGG	6 cut(s)	540, 1458, 1713, 1788, 2314, 2365
Alw21I	GWGCWC	2 cut(s)	1047, 2106
Alw26I	GTCTC	5 cut(s)	31, 688, 758, 1049, 2333
AlwI	GGATC	7 cut(s)	491, 944, 957, 1139, 1152, 1450, 1754
AlwNI	CAGNNNCTG	2 cut(s)	248, 1789
Aor51HI	AGCGCT	1 cut(s)	1430
AoxI	GGCC	4 cut(s)	150, 258, 1443, 1891
ApeKI	GCWGC	4 cut(s)	71, 239, 242, 2129
ApoI	RAATTY	5 cut(s)	1187, 1389, 1510, 1735, 1811
ArsI	GACNNNNNNTTYG	2 cut(s)	818, 850
AseI	ATTAAT	1 cut(s)	2094
AsiGI	ACCGGT	1 cut(s)	222
Asp700I	GAANNNNTTC	4 cut(s)	1392, 1722, 1736, 1811
Asp718I	GGTACC	1 cut(s)	2429
AspA2I	CCTAGG	1 cut(s)	1223
AspLEI	GCGC	5 cut(s)	42, 53, 89, 1431, 1697
AspS9I	GGNCC	3 cut(s)	63, 313, 564
AsuC2I	CCSGG	1 cut(s)	2147
AsuHPI	GGTGA	7 cut(s)	50, 455, 623, 1190, 1937, 1962, 2057
AsuII	TTCGAA	2 cut(s)	1506, 1740
AsuNHI	GCTAGC	1 cut(s)	740
AvaII	GGWCC	3 cut(s)	63, 313, 564
AvrII	CCTAGG	1 cut(s)	1223
AxyI	CCTNAGG	1 cut(s)	1083
BalI	TGGCCA	1 cut(s)	1893
BamHI	GGATCC	2 cut(s)	949, 1144
BanI	GGYRCC	1 cut(s)	2429
BanII	GRGCYC	2 cut(s)	698, 1047
BbrPI	CACGTG	1 cut(s)	1385
BbsI	GAAGAC	1 cut(s)	1019
Bbv12I	GWGCWC	2 cut(s)	1047, 2106
BbvCI	CCTCAGC	2 cut(s)	2352, 2403
BbvI	GCAGC	4 cut(s)	58, 226, 254, 2116
BccI	CCATC	5 cut(s)	129, 965, 1301, 1787, 2254
BceAI	ACGGC	2 cut(s)	61, 198
BciT130I	CCWGG	6 cut(s)	542, 1460, 1715, 1790, 2316, 2367
BciVI	GTATCC	2 cut(s)	470, 846
BclI	TGATCA	1 cut(s)	1614
BcnI	CCSGG	1 cut(s)	2147
BcoDI	GTCTC	5 cut(s)	31, 688, 758, 1049, 2333
BfaI	CTAG	6 cut(s)	741, 789, 1151, 1224, 2055, 2205
BfmI	CTRYAG	1 cut(s)	240
BfoI	RGCGCY	1 cut(s)	1432
BfuI	GTATCC	2 cut(s)	470, 846
BglI	GCCNNNNNGGC	1 cut(s)	48
BglII	AGATCT	1 cut(s)	1834
BisI	GCNGC	5 cut(s)	49, 72, 240, 243, 2130
BlnI	CCTAGG	1 cut(s)	1223
BlsI	GCNGC	5 cut(s)	50, 73, 241, 244, 2131
Bme1390I	CCNGG	7 cut(s)	542, 1460, 1715, 1790, 2147, 2316, 2367
Bme18I	GGWCC	3 cut(s)	63, 313, 564
BmeRI	GACNNNNNGTC	1 cut(s)	23
BmgBI	CACGTC	1 cut(s)	56
BmgT120I	GGNCC	3 cut(s)	63, 313, 564
BmiI	GGNNCC	7 cut(s)	420, 565, 796, 951, 1146, 2371, 2431
BmrFI	CCNGG	7 cut(s)	542, 1460, 1715, 1790, 2147, 2316, 2367
BmrI	ACTGGG	2 cut(s)	1042, 1541
BmsI	GCATC	8 cut(s)	112, 241, 263, 373, 592, 1163, 2149, 2371
BmtI	GCTAGC	1 cut(s)	744
BmuI	ACTGGG	2 cut(s)	1042, 1541
BpiI	GAAGAC	1 cut(s)	1019
Bpu10I	CCTNAGC	6 cut(s)	398, 803, 1650, 2100, 2352, 2403
Bpu14I	TTCGAA	2 cut(s)	1506, 1740
BpuEI	CTTGAG	5 cut(s)	800, 1351, 1655, 1748, 2081
BpuMI	CCSGG	1 cut(s)	2147
BsaAI	YACGTR	1 cut(s)	1385
BsaBI	GATNNNNATC	2 cut(s)	948, 1629
BsaHI	GRCGYC	1 cut(s)	2320
BsaJI	CCNNGG	8 cut(s)	43, 180, 387, 541, 990, 1223, 1459, 2301
BsaWI	WCCGGW	2 cut(s)	60, 222
BsaXI	ACNNNNNCTCC	2 cut(s)	58, 88
Bsc4I	CCNNNNNNNGG	2 cut(s)	1603, 1789
Bse118I	RCCGGY	1 cut(s)	222
Bse1I	ACTGG	3 cut(s)	1037, 1536, 1938
Bse21I	CCTNAGG	1 cut(s)	1083
Bse3DI	GCAATG	3 cut(s)	379, 1574, 1671
Bse8I	GATNNNNATC	2 cut(s)	948, 1629
BseBI	CCWGG	6 cut(s)	542, 1460, 1715, 1790, 2316, 2367
BseDI	CCNNGG	8 cut(s)	43, 180, 387, 541, 990, 1223, 1459, 2301
BseGI	GGATG	7 cut(s)	976, 1240, 1612, 1630, 1779, 2155, 2362
BseJI	GATNNNNATC	2 cut(s)	948, 1629
BseLI	CCNNNNNNNGG	2 cut(s)	1603, 1789
BseMI	GCAATG	3 cut(s)	379, 1574, 1671
BseNI	ACTGG	3 cut(s)	1037, 1536, 1938
BseRI	GAGGAG	1 cut(s)	776
BseX3I	CGGCCG	1 cut(s)	258
BseXI	GCAGC	4 cut(s)	58, 226, 254, 2116
BseYI	CCCAGC	1 cut(s)	2236
Bsh1285I	CGRYCG	1 cut(s)	261
BshFI	GGCC	4 cut(s)	152, 260, 1445, 1893
BshNI	GGYRCC	1 cut(s)	2429
BshTI	ACCGGT	1 cut(s)	222
BsiEI	CGRYCG	1 cut(s)	261
BsiHKAI	GWGCWC	2 cut(s)	1047, 2106
BsiSI	CCGG	3 cut(s)	61, 223, 2147
BslFI	GGGAC	1 cut(s)	577
BslI	CCNNNNNNNGG	2 cut(s)	1603, 1789
BsmAI	GTCTC	5 cut(s)	31, 688, 758, 1049, 2333
BsmBI	CGTCTC	3 cut(s)	31, 688, 2333
BsmFI	GGGAC	1 cut(s)	577
BsmI	GAATGC	2 cut(s)	656, 2131
BsnI	GGCC	4 cut(s)	152, 260, 1445, 1893
Bsp119I	TTCGAA	2 cut(s)	1506, 1740
Bsp1286I	GDGCHC	3 cut(s)	698, 1047, 2106
Bsp1407I	TGTACA	1 cut(s)	333
BspACI	CCGC	8 cut(s)	30, 48, 69, 270, 567, 605, 799, 1214
BspANI	GGCC	4 cut(s)	152, 260, 1445, 1893
BspLI	GGNNCC	7 cut(s)	420, 565, 796, 951, 1146, 2371, 2431
BspMAI	CTGCAG	1 cut(s)	244
BspOI	GCTAGC	1 cut(s)	744
BspPI	GGATC	7 cut(s)	491, 944, 957, 1139, 1152, 1450, 1754
BspT104I	TTCGAA	2 cut(s)	1506, 1740
BspT107I	GGYRCC	1 cut(s)	2429
BsrDI	GCAATG	3 cut(s)	379, 1574, 1671
BsrFI	RCCGGY	1 cut(s)	222
BsrGI	TGTACA	1 cut(s)	333
BsrI	ACTGG	3 cut(s)	1037, 1536, 1938
BssAI	RCCGGY	1 cut(s)	222
BssECI	CCNNGG	8 cut(s)	43, 180, 387, 541, 990, 1223, 1459, 2301
BssNAI	GTATAC	1 cut(s)	750
BssNI	GRCGYC	1 cut(s)	2320
BssT1I	CCWWGG	2 cut(s)	387, 1223
Bst1107I	GTATAC	1 cut(s)	750
Bst2UI	CCWGG	6 cut(s)	542, 1460, 1715, 1790, 2316, 2367
Bst4CI	ACNGT	7 cut(s)	210, 338, 882, 1018, 1317, 1958, 2041
Bst6I	CTCTTC	1 cut(s)	1597
BstACI	GRCGYC	1 cut(s)	2320
BstAPI	GCANNNNNTGC	1 cut(s)	383
BstAUI	TGTACA	1 cut(s)	333
BstBAI	YACGTR	1 cut(s)	1385
BstBI	TTCGAA	2 cut(s)	1506, 1740
BstC8I	GCNNGC	3 cut(s)	742, 1699, 2134
BstDSI	CCRYGG	2 cut(s)	43, 180
BstF5I	GGATG	7 cut(s)	976, 1240, 1612, 1630, 1779, 2155, 2362
BstH2I	RGCGCY	1 cut(s)	1432
BstHHI	GCGC	5 cut(s)	42, 53, 89, 1431, 1697
BstMAI	GTCTC	5 cut(s)	31, 688, 758, 1049, 2333
BstMCI	CGRYCG	1 cut(s)	261
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 191, 251, 383, 2168
BstNI	CCWGG	6 cut(s)	542, 1460, 1715, 1790, 2316, 2367
BstNSI	RCATGY	1 cut(s)	1902
BstSCI	CCNGG	7 cut(s)	540, 1458, 1713, 1788, 2145, 2314, 2365
BstSFI	CTRYAG	1 cut(s)	240
BstV1I	GCAGC	4 cut(s)	58, 226, 254, 2116
BstV2I	GAAGAC	1 cut(s)	1019
BstX2I	RGATCY	3 cut(s)	949, 1144, 1834
BstYI	RGATCY	3 cut(s)	949, 1144, 1834
BstZ17I	GTATAC	1 cut(s)	750
BstZI	CGGCCG	1 cut(s)	258
Bsu36I	CCTNAGG	1 cut(s)	1083
BsuI	GTATCC	2 cut(s)	470, 846
BsuRI	GGCC	4 cut(s)	152, 260, 1445, 1893
BtgI	CCRYGG	2 cut(s)	43, 180
BtrI	CACGTC	1 cut(s)	56
BtsCI	GGATG	7 cut(s)	976, 1240, 1612, 1630, 1779, 2155, 2362
BtsI	GCAGTG	1 cut(s)	234
BtsIMutI	CAGTG	3 cut(s)	234, 415, 1945
Cac8I	GCNNGC	3 cut(s)	742, 1699, 2134
CaiI	CAGNNNCTG	2 cut(s)	248, 1789
CfoI	GCGC	5 cut(s)	42, 53, 89, 1431, 1697
Cfr10I	RCCGGY	1 cut(s)	222
Cfr13I	GGNCC	3 cut(s)	63, 313, 564
CseI	GACGC	2 cut(s)	27, 2328
Csp6I	GTAC	6 cut(s)	334, 922, 995, 1412, 1750, 2430
CspAI	ACCGGT	1 cut(s)	222
CviAII	CATG	5 cut(s)	310, 1471, 1642, 1899, 2014
CviQI	GTAC	6 cut(s)	334, 922, 995, 1412, 1750, 2430
DraIII	CACNNNGTG	1 cut(s)	560
DriI	GACNNNNNGTC	1 cut(s)	23
EaeI	YGGCCR	2 cut(s)	258, 1891
EagI	CGGCCG	1 cut(s)	258
Eam1104I	CTCTTC	1 cut(s)	1597
Eam1105I	GACNNNNNGTC	1 cut(s)	23
EarI	CTCTTC	1 cut(s)	1597
Ecl136II	GAGCTC	1 cut(s)	1045
EclXI	CGGCCG	1 cut(s)	258
Eco130I	CCWWGG	2 cut(s)	387, 1223
Eco147I	AGGCCT	1 cut(s)	1445
Eco24I	GRGCYC	2 cut(s)	698, 1047
Eco32I	GATATC	1 cut(s)	454
Eco47I	GGWCC	3 cut(s)	63, 313, 564
Eco47III	AGCGCT	1 cut(s)	1430
Eco52I	CGGCCG	1 cut(s)	258
Eco53kI	GAGCTC	1 cut(s)	1045
Eco57I	CTGAAG	2 cut(s)	315, 1379
Eco72I	CACGTG	1 cut(s)	1385
Eco81I	CCTNAGG	1 cut(s)	1083
EcoICRI	GAGCTC	1 cut(s)	1045
EcoRI	GAATTC	1 cut(s)	1187
EcoRII	CCWGG	6 cut(s)	540, 1458, 1713, 1788, 2314, 2365
EcoRV	GATATC	1 cut(s)	454
EcoT14I	CCWWGG	2 cut(s)	387, 1223
EcoT22I	ATGCAT	2 cut(s)	6, 256
EcoT38I	GRGCYC	2 cut(s)	698, 1047
ErhI	CCWWGG	2 cut(s)	387, 1223
Esp3I	CGTCTC	3 cut(s)	31, 688, 2333
FaeI	CATG	5 cut(s)	313, 1474, 1645, 1902, 2017
FaqI	GGGAC	1 cut(s)	577
FatI	CATG	5 cut(s)	309, 1470, 1641, 1898, 2013
FauI	CCCGC	3 cut(s)	277, 598, 806
FbaI	TGATCA	1 cut(s)	1614
FblI	GTMKAC	2 cut(s)	749, 2288
Fnu4HI	GCNGC	5 cut(s)	49, 72, 240, 243, 2130
FokI	GGATG	7 cut(s)	983, 1247, 1619, 1637, 1766, 2162, 2349
FriOI	GRGCYC	2 cut(s)	698, 1047
Fsp4HI	GCNGC	5 cut(s)	49, 72, 240, 243, 2130
FspBI	CTAG	6 cut(s)	741, 789, 1151, 1224, 2055, 2205
GlaI	GCGC	5 cut(s)	41, 52, 88, 1430, 1696
GluI	GCNGC	5 cut(s)	49, 72, 240, 243, 2130
GsaI	CCCAGC	1 cut(s)	2240
HaeII	RGCGCY	1 cut(s)	1432
HaeIII	GGCC	4 cut(s)	152, 260, 1445, 1893
HapII	CCGG	3 cut(s)	61, 223, 2147
HgaI	GACGC	2 cut(s)	27, 2328
HhaI	GCGC	5 cut(s)	42, 53, 89, 1431, 1697
Hin1I	GRCGYC	1 cut(s)	2320
Hin1II	CATG	5 cut(s)	313, 1474, 1645, 1902, 2017
Hin6I	GCGC	5 cut(s)	40, 51, 87, 1429, 1695
HinP1I	GCGC	5 cut(s)	40, 51, 87, 1429, 1695
HincII	GTYRAC	3 cut(s)	325, 535, 1246
HindII	GTYRAC	3 cut(s)	325, 535, 1246
HindIII	AAGCTT	2 cut(s)	779, 860
HinfI	GANTC	9 cut(s)	230, 279, 500, 517, 959, 1355, 1402, 1793, 2224
HpaI	GTTAAC	1 cut(s)	325
HpaII	CCGG	3 cut(s)	61, 223, 2147
HphI	GGTGA	7 cut(s)	50, 455, 623, 1190, 1937, 1962, 2057
Hpy166II	GTNNAC	8 cut(s)	234, 325, 535, 750, 924, 1246, 1354, 2289
Hpy188I	TCNGA	6 cut(s)	250, 706, 1297, 1440, 1681, 1947
Hpy8I	GTNNAC	8 cut(s)	234, 325, 535, 750, 924, 1246, 1354, 2289
Hpy99I	CGWCG	1 cut(s)	21
HpyAV	CCTTC	6 cut(s)	427, 583, 1225, 1435, 1651, 2023
HpyCH4III	ACNGT	7 cut(s)	210, 338, 882, 1018, 1317, 1958, 2041
HpyCH4IV	ACGT	4 cut(s)	55, 1384, 1918, 2342
HpyCH4V	TGCA	8 cut(s)	4, 174, 242, 254, 377, 554, 1539, 2132
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 191, 251, 383, 2168
HpySE526I	ACGT	4 cut(s)	55, 1384, 1918, 2342
Hsp92I	GRCGYC	1 cut(s)	2320
Hsp92II	CATG	5 cut(s)	313, 1474, 1645, 1902, 2017
HspAI	GCGC	5 cut(s)	40, 51, 87, 1429, 1695
KpnI	GGTACC	1 cut(s)	2433
Ksp22I	TGATCA	1 cut(s)	1614
KspAI	GTTAAC	1 cut(s)	325
LmnI	GCTCC	6 cut(s)	26, 79, 418, 1042, 1225, 1576
Lsp1109I	GCAGC	4 cut(s)	58, 226, 254, 2116
LweI	GCATC	8 cut(s)	112, 241, 263, 373, 592, 1163, 2149, 2371
MaeI	CTAG	6 cut(s)	741, 789, 1151, 1224, 2055, 2205
MaeII	ACGT	4 cut(s)	55, 1384, 1918, 2342
MaeIII	GTNAC	7 cut(s)	56, 338, 412, 611, 1090, 1925, 1968
MfeI	CAATTG	2 cut(s)	549, 1764
MflI	RGATCY	3 cut(s)	949, 1144, 1834
MhlI	GDGCHC	3 cut(s)	698, 1047, 2106
MlsI	TGGCCA	1 cut(s)	1893
MluCI	AATT	9 cut(s)	549, 619, 753, 1187, 1389, 1510, 1735, 1764, 1811
MluNI	TGGCCA	1 cut(s)	1893
MlyI	GAGTC	4 cut(s)	239, 511, 1349, 1411
MmeI	TCCRAC	1 cut(s)	222
Mox20I	TGGCCA	1 cut(s)	1893
Mph1103I	ATGCAT	2 cut(s)	6, 256
MroXI	GAANNNNTTC	4 cut(s)	1392, 1722, 1736, 1811
MscI	TGGCCA	1 cut(s)	1893
MseI	TTAA	6 cut(s)	165, 324, 1131, 1878, 1911, 2094
Msp20I	TGGCCA	1 cut(s)	1893
MspA1I	CMGCKG	5 cut(s)	71, 272, 956, 1214, 2236
MspI	CCGG	3 cut(s)	61, 223, 2147
MspR9I	CCNGG	7 cut(s)	542, 1460, 1715, 1790, 2147, 2316, 2367
MunI	CAATTG	2 cut(s)	549, 1764
Mva1269I	GAATGC	2 cut(s)	656, 2131
MvaI	CCWGG	6 cut(s)	542, 1460, 1715, 1790, 2316, 2367
MwoI	GCNNNNNNNGC	5 cut(s)	48, 191, 251, 383, 2168
NciI	CCSGG	1 cut(s)	2147
NheI	GCTAGC	1 cut(s)	740
NlaIII	CATG	5 cut(s)	313, 1474, 1645, 1902, 2017
NlaIV	GGNNCC	7 cut(s)	420, 565, 796, 951, 1146, 2371, 2431
NmeAIII	GCCGAG	4 cut(s)	286, 499, 632, 2326
NmuCI	GTSAC	5 cut(s)	56, 611, 1090, 1925, 1968
NsiI	ATGCAT	2 cut(s)	6, 256
NspI	RCATGY	1 cut(s)	1902
NspV	TTCGAA	2 cut(s)	1506, 1740
PceI	AGGCCT	1 cut(s)	1445
PciI	ACATGT	1 cut(s)	1898
PctI	GAATGC	2 cut(s)	656, 2131
PdmI	GAANNNNTTC	4 cut(s)	1392, 1722, 1736, 1811
PfeI	GAWTC	5 cut(s)	279, 500, 959, 1793, 2224
PflFI	GACNNNGTC	1 cut(s)	1241
PflMI	CCANNNNNTGG	1 cut(s)	1789
PfoI	TCCNGGA	2 cut(s)	1713, 2365
PinAI	ACCGGT	1 cut(s)	222
PkrI	GCNGC	5 cut(s)	50, 73, 241, 244, 2131
PleI	GAGTC	4 cut(s)	238, 511, 1349, 1410
PmaCI	CACGTG	1 cut(s)	1385
PmlI	CACGTG	1 cut(s)	1385
PpsI	GAGTC	4 cut(s)	238, 511, 1349, 1410
Ppu21I	YACGTR	1 cut(s)	1385
PscI	ACATGT	1 cut(s)	1898
PshBI	ATTAAT	1 cut(s)	2094
Psp124BI	GAGCTC	1 cut(s)	1047
Psp1406I	AACGTT	1 cut(s)	1918
Psp6I	CCWGG	6 cut(s)	540, 1458, 1713, 1788, 2314, 2365
PspCI	CACGTG	1 cut(s)	1385
PspFI	CCCAGC	1 cut(s)	2236
PspGI	CCWGG	6 cut(s)	540, 1458, 1713, 1788, 2314, 2365
PspN4I	GGNNCC	7 cut(s)	420, 565, 796, 951, 1146, 2371, 2431
PspPI	GGNCC	3 cut(s)	63, 313, 564
PstI	CTGCAG	1 cut(s)	244
PstNI	CAGNNNCTG	2 cut(s)	248, 1789
PsuI	RGATCY	3 cut(s)	949, 1144, 1834
PsyI	GACNNNGTC	1 cut(s)	1241
PvuII	CAGCTG	2 cut(s)	956, 2236
RsaI	GTAC	6 cut(s)	335, 923, 996, 1413, 1751, 2431
RsaNI	GTAC	6 cut(s)	334, 922, 995, 1412, 1750, 2430
SacI	GAGCTC	1 cut(s)	1047
SaqAI	TTAA	6 cut(s)	165, 324, 1131, 1878, 1911, 2094
SatI	GCNGC	5 cut(s)	49, 72, 240, 243, 2130
Sau96I	GGNCC	3 cut(s)	63, 313, 564
SchI	GAGTC	4 cut(s)	239, 511, 1349, 1411
ScrFI	CCNGG	7 cut(s)	542, 1460, 1715, 1790, 2147, 2316, 2367
SduI	GDGCHC	3 cut(s)	698, 1047, 2106
SfaNI	GCATC	8 cut(s)	112, 241, 263, 373, 592, 1163, 2149, 2371
SfcI	CTRYAG	1 cut(s)	240
SfuI	TTCGAA	2 cut(s)	1506, 1740
SinI	GGWCC	3 cut(s)	63, 313, 564
SmlI	CTYRAG	5 cut(s)	815, 1330, 1634, 1727, 2060
SmoI	CTYRAG	5 cut(s)	815, 1330, 1634, 1727, 2060
Sse9I	AATT	9 cut(s)	549, 619, 753, 1187, 1389, 1510, 1735, 1764, 1811
SseBI	AGGCCT	1 cut(s)	1445
SsiI	CCGC	8 cut(s)	30, 48, 69, 270, 567, 605, 799, 1214
SspMI	CTAG	6 cut(s)	741, 789, 1151, 1224, 2055, 2205
SstI	GAGCTC	1 cut(s)	1047
StuI	AGGCCT	1 cut(s)	1445
StyD4I	CCNGG	7 cut(s)	540, 1458, 1713, 1788, 2145, 2314, 2365
StyI	CCWWGG	2 cut(s)	387, 1223
TaaI	ACNGT	7 cut(s)	210, 338, 882, 1018, 1317, 1958, 2041
TaiI	ACGT	4 cut(s)	58, 1387, 1921, 2345
TaqI	TCGA	5 cut(s)	16, 282, 1324, 1506, 1740
TasI	AATT	9 cut(s)	549, 619, 753, 1187, 1389, 1510, 1735, 1764, 1811
TatI	WGTACW	2 cut(s)	333, 1749
TauI	GCSGC	1 cut(s)	51
TfiI	GAWTC	5 cut(s)	279, 500, 959, 1793, 2224
Tru1I	TTAA	6 cut(s)	165, 324, 1131, 1878, 1911, 2094
Tru9I	TTAA	6 cut(s)	165, 324, 1131, 1878, 1911, 2094
TscAI	CASTG	3 cut(s)	241, 415, 1945
TseFI	GTSAC	5 cut(s)	56, 611, 1090, 1925, 1968
TseI	GCWGC	4 cut(s)	71, 239, 242, 2129
Tsp45I	GTSAC	5 cut(s)	56, 611, 1090, 1925, 1968
TspDTI	ATGAA	7 cut(s)	1149, 1279, 1509, 1641, 1658, 2042, 2169
TspGWI	ACGGA	6 cut(s)	13, 431, 446, 865, 1112, 1429
TspRI	CASTG	3 cut(s)	241, 415, 1945
Tth111I	GACNNNGTC	1 cut(s)	1241
Van91I	CCANNNNNTGG	1 cut(s)	1789
VpaK11BI	GGWCC	3 cut(s)	63, 313, 564
VspI	ATTAAT	1 cut(s)	2094
XapI	RAATTY	5 cut(s)	1187, 1389, 1510, 1735, 1811
XceI	RCATGY	1 cut(s)	1902
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1786
XmaJI	CCTAGG	1 cut(s)	1223
XmiI	GTMKAC	2 cut(s)	749, 2288
XmnI	GAANNNNTTC	4 cut(s)	1392, 1722, 1736, 1811
XspI	CTAG	6 cut(s)	741, 789, 1151, 1224, 2055, 2205
Zsp2I	ATGCAT	2 cut(s)	6, 256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.