AT3G09550

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0008293
Physical Location & Seq
Forward (+)
2931101 .. 2934365
3265 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G09550.3

Sequence Viewer

Length: 1824 bp
ATGGGATCCAGAATCGAAGAAGAGAAGGAACTGGAACCAGGTATGGAGAAGGGTCTGGCGACGGATCCAACGAGTCCTACAGGGAGTACTGTAGCGGACCTGTCGCCAACTCCAACCCCAAGGAAGACTCTGGTTCTGTCCAATTCGGGTAAGGCTTTAATGGTGTCTAACTCGAGCAAGTCCTTGGGGCTTTCGAATTCAGGGAAAAGGTTTGATCCAACGGGGAAGAAGAAGTATGTTAAACAGGTCACGGGACGGCACAACGACACCGAGCTTCACCTAGCTGCTCAAAGAGGAGACTTGGCTTCTGTTAAGCAGATTCTTAGTGACATTGATTCTCAGATTACTGGTACCATTACCGGAGCTGATTTTGATGACGAGGTAGCTCAAATAATGACATCCGTAGTAAACGAGGTGAATGAGCTGGGGGAGACACCGCTTTTTACAGCAGCAGAGAAAGGAAACATAGATGTTGTCAAGGAATTGTTGCCTTACACGACCATTGAATCTCTTATGCAGAAGAATCTTTCTGGATTTGACGCTTTACACATTGCTTGTAGTCAAGGCCATCGATCTATTGTTCAGTTATTGCTTGAGCATGAACCTCAATTGAGTAAAACAGTAGCTCAATCAAACGCAACCCCACTTGTGTCGGCTGCAACTCGAGGGCATTCAGAAGTTGTCAATGAATTGCTTGCTAAAGACTCAAGCTTGCTTGAGATTTCAAGATCGAATGGAAAAAACGCGCTTCACCTTGCTGCGCGCCAAGGTCATGTAGATATTGTAAGAACCTTGCTTGATAAAGATCCGCAGTTAGCAAGACGAACAGACAAGAAAGGACAGACGTCTTTGCATATGGCTGTGAAAGGAGTTAGCTCACAAGTCGTGAGGTTGCTCCTTCGAGCTGATCCGGCTATTGTCATGCTTCCTGATAAATTTGGTAACACCGTGTTGCATATTGCTACACGAAAGAAAAGAGCAGAGATTGTGAATGAGCTGTTACAACTTCCGGATACAAACGTGAATGCGCTAACAAGAGACCATAAAACCGCATACGACATCGCTGAAGGACTCACTCATTCAGAGGAAACGGCAGAGATCAAAGAGATATTATCGCGTTGCGGTGCACTTAAAGCCAACGAACTAAACCAGCCAAGAGACGAGCTTAGAAAAACCGTGACCGAGATCAAGAAAGACGTTCACACTCAGCTGGAACAAACCCGAAAAACCAACAAAAACGTCGATGGGATCGCCAAGGAGCTAAGGAAACTCCACAGAGCTGGAATCAACAATGCGACCAACTCTGTAACCGTCGTGGCTGTTCTCTTTGCCACGGTTGCATTTGCTGCCATTTTCACGGTTCCAGGAGGTGACGACGACCACGGTGTGGCCGTTATGGTCCATGCAACATCTTTCAAGATATTCTTTATATTCAACGCGATCGCGCTCTTCACTTCGTTAGCAGTAGTTGTCGTGCAAATCACGCTTGTAAGAGGAGAGACTAAAACGGAGAGACGTGTGGTGGAAGTAATAAATAAGCTCATGTGGCTCGCTTCTGTCTGCACCACCGTGGCATTCATTTCCTCATCGTACATTGTGGTTGGTCGGAGAAATAGATACGCGGCGGTTGTGGTAACGGTCATAGGAACTGTTACGATGACCGGAATTTTGAGTATAATGACATATTATGTGGTGAAATCGAAGAGGACGAGGATAGTAAGGAAGAAGGAGAAGAAGAAATCTGCTAGAAATGGGACGAGTTCGTGGCATCATGCGAATCCGTCAGAGACTGAATCGGAGGTTAATCCGATATACGCAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

607

Amino Acids

66.25

Weight (kDa)

9.26

Isoelectric Point (pI)

33.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 92 - 203 2.1e-15 Ankyrin repeats (3 copies)
Ank_KRIT1 PF24521 144 - 235 6.8e-07 KRIT1 ankyrin-repeats domain
Ank_4 PF13637 147 - 198 3.3e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 211 - 270 1.9e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 217 - 266 6.3e-06 Ankyrin repeats (many copies)
Ank_4 PF13637 250 - 300 4.9e-08 Ankyrin repeats (many copies)
Ank_5 PF13857 265 - 304 7.4e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 276 - 342 8.3e-09 Ankyrin repeats (3 copies)
Ank_5 PF13857 299 - 355 5.3e-06 Ankyrin repeats (many copies)
PGG PF13962 429 - 533 2.6e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 848
Acc65I GGTACC 1 cut(s) 350
AccB1I GGYRCC 1 cut(s) 350
AccB7I CCANNNNNTGG 1 cut(s) 1387
AccII CGCG 6 cut(s) 746, 763, 1117, 1439, 1445, 1622
AccIII TCCGGA 1 cut(s) 1009
AciI CCGC 7 cut(s) 95, 437, 809, 1050, 1122, 1622, 1625
AclWI GGATC 7 cut(s) 13, 59, 72, 209, 800, 902, 1256
AcoI YGGCCR 1 cut(s) 1389
AcsI RAATTY 3 cut(s) 196, 935, 1665
AcuI CTGAAG 1 cut(s) 1086
AcyI GRCGYC 1 cut(s) 845
AdeI CACNNNGTG 1 cut(s) 1387
AfaI GTAC 3 cut(s) 88, 352, 1592
AfiI CCNNNNNNNGG 1 cut(s) 1387
AflIII ACRYGT 1 cut(s) 1516
AgsI TTSAA 4 cut(s) 506, 726, 1417, 1435
AjiI CACGTC 1 cut(s) 1517
AjnI CCWGG 2 cut(s) 37, 1363
AleI CACNNNNGTG 1 cut(s) 1568
Alw21I GWGCWC 1 cut(s) 1129
Alw26I GTCTC 7 cut(s) 291, 425, 1032, 1152, 1493, 1507, 1781
Alw44I GTGCAC 1 cut(s) 1125
AlwI GGATC 7 cut(s) 13, 59, 72, 209, 800, 902, 1256
AlwNI CAGNNNCTG 1 cut(s) 1790
Ama87I CYCGRG 2 cut(s) 172, 663
Aor13HI TCCGGA 1 cut(s) 1009
AoxI GGCC 2 cut(s) 565, 1389
ApaLI GTGCAC 1 cut(s) 1125
ApeKI GCWGC 5 cut(s) 284, 449, 656, 758, 1346
ApoI RAATTY 3 cut(s) 196, 935, 1665
ArsI GACNNNNNNTTYG 2 cut(s) 1651, 1683
AsiSI GCGATCGC 1 cut(s) 1443
Asp718I GGTACC 1 cut(s) 350
AspLEI GCGC 5 cut(s) 748, 763, 765, 1030, 1447
AspS9I GGNCC 2 cut(s) 97, 1399
AsuHPI GGTGA 5 cut(s) 269, 427, 743, 1382, 1705
AsuII TTCGAA 1 cut(s) 194
AvaI CYCGRG 2 cut(s) 172, 663
AvaII GGWCC 2 cut(s) 97, 1399
BaeGI GKGCMC 1 cut(s) 1129
BaeI ACNNNNGTAYC 2 cut(s) 1005, 1038
BamHI GGATCC 2 cut(s) 5, 64
BanI GGYRCC 1 cut(s) 350
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 1 cut(s) 1129
BbvI GCAGC 5 cut(s) 271, 461, 643, 745, 1333
BccI CCATC 2 cut(s) 576, 1238
BceAI ACGGC 3 cut(s) 272, 1107, 1376
BciT130I CCWGG 2 cut(s) 39, 1365
BciVI GTATCC 1 cut(s) 1006
BcoDI GTCTC 7 cut(s) 291, 425, 1032, 1152, 1493, 1507, 1781
BfaI CTAG 2 cut(s) 281, 1746
BfmI CTRYAG 2 cut(s) 78, 90
BfuI GTATCC 1 cut(s) 1006
BisI GCNGC 6 cut(s) 285, 450, 657, 759, 1347, 1623
BlsI GCNGC 6 cut(s) 286, 451, 658, 760, 1348, 1624
BmcAI AGTACT 1 cut(s) 88
Bme1390I CCNGG 2 cut(s) 39, 1365
Bme18I GGWCC 2 cut(s) 97, 1399
BmeT110I CYCGRG 2 cut(s) 172, 663
BmgBI CACGTC 1 cut(s) 1517
BmgT120I GGNCC 2 cut(s) 97, 1399
BmiI GGNNCC 5 cut(s) 7, 36, 66, 352, 1362
BmrFI CCNGG 2 cut(s) 39, 1365
BmsI GCATC 1 cut(s) 1777
BoxI GACNNNNGTC 1 cut(s) 844
BpiI GAAGAC 1 cut(s) 131
Bpu10I CCTNAGC 1 cut(s) 1262
Bpu14I TTCGAA 1 cut(s) 194
BpuEI CTTGAG 3 cut(s) 614, 691, 737
Bsa29I ATCGAT 1 cut(s) 571
BsaBI GATNNNNATC 1 cut(s) 804
BsaHI GRCGYC 1 cut(s) 845
BsaI GGTCTC 1 cut(s) 1032
BsaJI CCNNGG 7 cut(s) 119, 183, 766, 1254, 1332, 1381, 1569
BsaWI WCCGGW 3 cut(s) 359, 1009, 1661
Bsc4I CCNNNNNNNGG 1 cut(s) 1387
Bse1I ACTGG 2 cut(s) 36, 352
Bse3DI GCAATG 1 cut(s) 549
Bse8I GATNNNNATC 1 cut(s) 804
BseAI TCCGGA 1 cut(s) 1009
BseBI CCWGG 2 cut(s) 39, 1365
BseCI ATCGAT 1 cut(s) 571
BseDI CCNNGG 7 cut(s) 119, 183, 766, 1254, 1332, 1381, 1569
BseGI GGATG 1 cut(s) 398
BseJI GATNNNNATC 1 cut(s) 804
BseLI CCNNNNNNNGG 1 cut(s) 1387
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 2 cut(s) 353, 1220
BseNI ACTGG 2 cut(s) 36, 352
BsePI GCGCGC 1 cut(s) 761
BseRI GAGGAG 2 cut(s) 309, 1509
BseSI GKGCMC 1 cut(s) 1129
BseXI GCAGC 5 cut(s) 271, 461, 643, 745, 1333
BseYI CCCAGC 1 cut(s) 424
BsgI GTGCAG 1 cut(s) 1546
Bsh1236I CGCG 6 cut(s) 746, 763, 1117, 1439, 1445, 1622
Bsh1285I CGRYCG 1 cut(s) 1443
BshFI GGCC 2 cut(s) 567, 1391
BshNI GGYRCC 1 cut(s) 350
BshVI ATCGAT 1 cut(s) 571
BsiEI CGRYCG 1 cut(s) 1443
BsiHKAI GWGCWC 1 cut(s) 1129
BsiHKCI CYCGRG 2 cut(s) 172, 663
BsiSI CCGG 4 cut(s) 360, 911, 1010, 1662
BslFI GGGAC 2 cut(s) 267, 1768
BslI CCNNNNNNNGG 1 cut(s) 1387
BsmAI GTCTC 7 cut(s) 291, 425, 1032, 1152, 1493, 1507, 1781
BsmBI CGTCTC 2 cut(s) 1152, 1507
BsmFI GGGAC 2 cut(s) 267, 1768
BsmI GAATGC 3 cut(s) 670, 1030, 1574
BsnI GGCC 2 cut(s) 567, 1391
Bso31I GGTCTC 1 cut(s) 1032
BsoBI CYCGRG 2 cut(s) 172, 663
Bsp119I TTCGAA 1 cut(s) 194
Bsp1286I GDGCHC 1 cut(s) 1129
Bsp13I TCCGGA 1 cut(s) 1009
BspACI CCGC 7 cut(s) 95, 437, 809, 1050, 1122, 1622, 1625
BspANI GGCC 2 cut(s) 567, 1391
BspCNI CTCAG 2 cut(s) 352, 1219
BspDI ATCGAT 1 cut(s) 571
BspEI TCCGGA 1 cut(s) 1009
BspFNI CGCG 6 cut(s) 746, 763, 1117, 1439, 1445, 1622
BspLI GGNNCC 5 cut(s) 7, 36, 66, 352, 1362
BspPI GGATC 7 cut(s) 13, 59, 72, 209, 800, 902, 1256
BspQI GCTCTTC 1 cut(s) 1454
BspT104I TTCGAA 1 cut(s) 194
BspT107I GGYRCC 1 cut(s) 350
BspTNI GGTCTC 1 cut(s) 1032
BsrDI GCAATG 1 cut(s) 549
BsrI ACTGG 2 cut(s) 36, 352
BssECI CCNNGG 7 cut(s) 119, 183, 766, 1254, 1332, 1381, 1569
BssHII GCGCGC 1 cut(s) 761
BssNI GRCGYC 1 cut(s) 845
BssT1I CCWWGG 4 cut(s) 119, 183, 766, 1254
Bst2UI CCWGG 2 cut(s) 39, 1365
Bst6I CTCTTC 3 cut(s) 15, 1454, 1697
BstACI GRCGYC 1 cut(s) 845
BstAPI GCANNNNNTGC 1 cut(s) 1346
BstBI TTCGAA 1 cut(s) 194
BstC8I GCNNGC 4 cut(s) 696, 713, 763, 1551
BstDEI CTNAG 5 cut(s) 323, 339, 1166, 1206, 1262
BstDSI CCRYGG 3 cut(s) 1332, 1381, 1569
BstF5I GGATG 1 cut(s) 398
BstFNI CGCG 6 cut(s) 746, 763, 1117, 1439, 1445, 1622
BstHHI GCGC 5 cut(s) 748, 763, 765, 1030, 1447
BstMAI GTCTC 7 cut(s) 291, 425, 1032, 1152, 1493, 1507, 1781
BstMCI CGRYCG 1 cut(s) 1443
BstMWI GCNNNNNNNGC 6 cut(s) 911, 1133, 1337, 1346, 1483, 1546
BstNI CCWGG 2 cut(s) 39, 1365
BstPAI GACNNNNGTC 1 cut(s) 844
BstSCI CCNGG 2 cut(s) 37, 1363
BstSFI CTRYAG 2 cut(s) 78, 90
BstSLI GKGCMC 1 cut(s) 1129
BstUI CGCG 6 cut(s) 746, 763, 1117, 1439, 1445, 1622
BstV1I GCAGC 5 cut(s) 271, 461, 643, 745, 1333
BstV2I GAAGAC 1 cut(s) 131
BstX2I RGATCY 3 cut(s) 5, 64, 805
BstXI CCANNNNNNTGG 1 cut(s) 1280
BstYI RGATCY 3 cut(s) 5, 64, 805
Bsu15I ATCGAT 1 cut(s) 571
BsuI GTATCC 1 cut(s) 1006
BsuRI GGCC 2 cut(s) 567, 1391
BsuTUI ATCGAT 1 cut(s) 571
BtgI CCRYGG 3 cut(s) 1332, 1381, 1569
BtgZI GCGATG 1 cut(s) 1045
BtrI CACGTC 1 cut(s) 1517
BtsCI GGATG 1 cut(s) 398
Cac8I GCNNGC 4 cut(s) 696, 713, 763, 1551
CaiI CAGNNNCTG 1 cut(s) 1790
CfoI GCGC 5 cut(s) 748, 763, 765, 1030, 1447
Cfr13I GGNCC 2 cut(s) 97, 1399
ClaI ATCGAT 1 cut(s) 571
CseI GACGC 1 cut(s) 548
CsiI ACCWGGT 1 cut(s) 37
Csp6I GTAC 3 cut(s) 87, 351, 1591
CviAII CATG 6 cut(s) 599, 773, 922, 1403, 1543, 1772
CviQI GTAC 3 cut(s) 87, 351, 1591
DdeI CTNAG 5 cut(s) 323, 339, 1166, 1206, 1262
DraIII CACNNNGTG 1 cut(s) 1387
EaeI YGGCCR 1 cut(s) 1389
Eam1104I CTCTTC 3 cut(s) 15, 1454, 1697
EarI CTCTTC 3 cut(s) 15, 1454, 1697
Eco130I CCWWGG 4 cut(s) 119, 183, 766, 1254
Eco31I GGTCTC 1 cut(s) 1032
Eco47I GGWCC 2 cut(s) 97, 1399
Eco57I CTGAAG 1 cut(s) 1086
Eco88I CYCGRG 2 cut(s) 172, 663
EcoRI GAATTC 1 cut(s) 196
EcoRII CCWGG 2 cut(s) 37, 1363
EcoT14I CCWWGG 4 cut(s) 119, 183, 766, 1254
ErhI CCWWGG 4 cut(s) 119, 183, 766, 1254
Esp3I CGTCTC 2 cut(s) 1152, 1507
FaeI CATG 6 cut(s) 602, 776, 925, 1406, 1546, 1775
FalI AAGNNNNNCTT 2 cut(s) 1409, 1441
FaqI GGGAC 2 cut(s) 267, 1768
FatI CATG 6 cut(s) 598, 772, 921, 1402, 1542, 1771
FauNDI CATATG 1 cut(s) 855
Fnu4HI GCNGC 6 cut(s) 285, 450, 657, 759, 1347, 1623
FokI GGATG 1 cut(s) 385
Fsp4HI GCNGC 6 cut(s) 285, 450, 657, 759, 1347, 1623
FspBI CTAG 2 cut(s) 281, 1746
GlaI GCGC 5 cut(s) 747, 762, 764, 1029, 1446
GluI GCNGC 6 cut(s) 285, 450, 657, 759, 1347, 1623
GsaI CCCAGC 1 cut(s) 428
HaeIII GGCC 2 cut(s) 567, 1391
HapII CCGG 4 cut(s) 360, 911, 1010, 1662
HgaI GACGC 1 cut(s) 548
HhaI GCGC 5 cut(s) 748, 763, 765, 1030, 1447
Hin1I GRCGYC 1 cut(s) 845
Hin1II CATG 6 cut(s) 602, 776, 925, 1406, 1546, 1775
Hin6I GCGC 5 cut(s) 746, 761, 763, 1028, 1445
HinP1I GCGC 5 cut(s) 746, 761, 763, 1028, 1445
HindIII AAGCTT 1 cut(s) 709
HpaII CCGG 4 cut(s) 360, 911, 1010, 1662
HphI GGTGA 5 cut(s) 269, 427, 743, 1382, 1705
Hpy166II GTNNAC 3 cut(s) 409, 1127, 1201
Hpy188I TCNGA 8 cut(s) 342, 676, 1084, 1608, 1786, 1798, 1809, 1823
Hpy188III TCNNGA 8 cut(s) 9, 531, 726, 886, 929, 1010, 1189, 1417
Hpy8I GTNNAC 3 cut(s) 409, 1127, 1201
Hpy99I CGWCG 4 cut(s) 64, 1244, 1316, 1379
HpyAV CCTTC 5 cut(s) 19, 43, 908, 1061, 1720
HpyCH4IV ACGT 5 cut(s) 845, 1020, 1197, 1239, 1516
HpyCH4V TGCA 9 cut(s) 517, 659, 853, 955, 1127, 1340, 1406, 1477, 1563
HpyF10VI GCNNNNNNNGC 6 cut(s) 911, 1133, 1337, 1346, 1483, 1546
HpyF3I CTNAG 5 cut(s) 323, 339, 1166, 1206, 1262
HpySE526I ACGT 5 cut(s) 845, 1020, 1197, 1239, 1516
Hsp92I GRCGYC 1 cut(s) 845
Hsp92II CATG 6 cut(s) 602, 776, 925, 1406, 1546, 1775
HspAI GCGC 5 cut(s) 746, 761, 763, 1028, 1445
Kpn2I TCCGGA 1 cut(s) 1009
KpnI GGTACC 1 cut(s) 354
LguI GCTCTTC 1 cut(s) 1454
LmnI GCTCC 3 cut(s) 362, 900, 1258
Lsp1109I GCAGC 5 cut(s) 271, 461, 643, 745, 1333
LweI GCATC 1 cut(s) 1777
MabI ACCWGGT 1 cut(s) 37
MaeI CTAG 2 cut(s) 281, 1746
MaeII ACGT 5 cut(s) 845, 1020, 1197, 1239, 1516
MaeIII GTNAC 9 cut(s) 247, 326, 941, 999, 1177, 1306, 1370, 1633, 1651
MfeI CAATTG 1 cut(s) 608
MflI RGATCY 3 cut(s) 5, 64, 805
MhlI GDGCHC 1 cut(s) 1129
MluCI AATT 7 cut(s) 142, 196, 482, 608, 689, 935, 1665
MlyI GAGTC 4 cut(s) 82, 121, 698, 1065
MmeI TCCRAC 4 cut(s) 92, 137, 242, 1586
MroI TCCGGA 1 cut(s) 1009
MseI TTAA 5 cut(s) 158, 240, 312, 1131, 1803
MslI CAYNNNNRTG 1 cut(s) 1568
MspA1I CMGCKG 1 cut(s) 1210
MspI CCGG 4 cut(s) 360, 911, 1010, 1662
MspR9I CCNGG 2 cut(s) 39, 1365
MunI CAATTG 1 cut(s) 608
Mva1269I GAATGC 3 cut(s) 670, 1030, 1574
MvaI CCWGG 2 cut(s) 39, 1365
MvnI CGCG 6 cut(s) 746, 763, 1117, 1439, 1445, 1622
MwoI GCNNNNNNNGC 6 cut(s) 911, 1133, 1337, 1346, 1483, 1546
NdeI CATATG 1 cut(s) 855
NlaIII CATG 6 cut(s) 602, 776, 925, 1406, 1546, 1775
NlaIV GGNNCC 5 cut(s) 7, 36, 66, 352, 1362
NmuCI GTSAC 4 cut(s) 247, 326, 1177, 1370
NspV TTCGAA 1 cut(s) 194
OliI CACNNNNGTG 1 cut(s) 1568
PaeR7I CTCGAG 2 cut(s) 172, 663
PauI GCGCGC 1 cut(s) 761
PciSI GCTCTTC 1 cut(s) 1454
PcsI WCGNNNNNNNCGW 3 cut(s) 68, 1389, 1706
PctI GAATGC 3 cut(s) 670, 1030, 1574
PfeI GAWTC 8 cut(s) 12, 319, 335, 506, 523, 1284, 1777, 1793
PflMI CCANNNNNTGG 1 cut(s) 1387
PfoI TCCNGGA 1 cut(s) 1363
PkrI GCNGC 6 cut(s) 286, 451, 658, 760, 1348, 1624
Ple19I CGATCG 1 cut(s) 1443
PleI GAGTC 4 cut(s) 81, 121, 698, 1065
PpsI GAGTC 4 cut(s) 81, 121, 698, 1065
PshAI GACNNNNGTC 1 cut(s) 844
Psp6I CCWGG 2 cut(s) 37, 1363
PspFI CCCAGC 1 cut(s) 424
PspGI CCWGG 2 cut(s) 37, 1363
PspN4I GGNNCC 5 cut(s) 7, 36, 66, 352, 1362
PspPI GGNCC 2 cut(s) 97, 1399
PspXI VCTCGAGB 2 cut(s) 172, 663
PstNI CAGNNNCTG 1 cut(s) 1790
PsuI RGATCY 3 cut(s) 5, 64, 805
PteI GCGCGC 1 cut(s) 761
PvuI CGATCG 1 cut(s) 1443
PvuII CAGCTG 1 cut(s) 1210
RgaI GCGATCGC 1 cut(s) 1443
RsaI GTAC 3 cut(s) 88, 352, 1592
RsaNI GTAC 3 cut(s) 87, 351, 1591
RseI CAYNNNNRTG 1 cut(s) 1568
SapI GCTCTTC 1 cut(s) 1454
SaqAI TTAA 5 cut(s) 158, 240, 312, 1131, 1803
SatI GCNGC 6 cut(s) 285, 450, 657, 759, 1347, 1623
Sau96I GGNCC 2 cut(s) 97, 1399
ScaI AGTACT 1 cut(s) 88
SchI GAGTC 4 cut(s) 82, 121, 698, 1065
ScrFI CCNGG 2 cut(s) 39, 1365
SduI GDGCHC 1 cut(s) 1129
SexAI ACCWGGT 1 cut(s) 37
SfaAI GCGATCGC 1 cut(s) 1443
SfaNI GCATC 1 cut(s) 1777
SfcI CTRYAG 2 cut(s) 78, 90
Sfr274I CTCGAG 2 cut(s) 172, 663
SfuI TTCGAA 1 cut(s) 194
SgfI GCGATCGC 1 cut(s) 1443
SinI GGWCC 2 cut(s) 97, 1399
SlaI CTCGAG 2 cut(s) 172, 663
SmiMI CAYNNNNRTG 1 cut(s) 1568
SmlI CTYRAG 5 cut(s) 172, 593, 663, 706, 716
SmoI CTYRAG 5 cut(s) 172, 593, 663, 706, 716
Sse9I AATT 7 cut(s) 142, 196, 482, 608, 689, 935, 1665
SsiI CCGC 7 cut(s) 95, 437, 809, 1050, 1122, 1622, 1625
SspMI CTAG 2 cut(s) 281, 1746
StyD4I CCNGG 2 cut(s) 37, 1363
StyI CCWWGG 4 cut(s) 119, 183, 766, 1254
TaiI ACGT 5 cut(s) 848, 1023, 1200, 1242, 1519
TaqI TCGA 9 cut(s) 15, 173, 194, 571, 664, 731, 901, 1242, 1700
TaqII GACCGA 1 cut(s) 1196
TasI AATT 7 cut(s) 142, 196, 482, 608, 689, 935, 1665
TatI WGTACW 1 cut(s) 86
TauI GCSGC 1 cut(s) 1625
TfiI GAWTC 8 cut(s) 12, 319, 335, 506, 523, 1284, 1777, 1793
Tru1I TTAA 5 cut(s) 158, 240, 312, 1131, 1803
Tru9I TTAA 5 cut(s) 158, 240, 312, 1131, 1803
TseFI GTSAC 4 cut(s) 247, 326, 1177, 1370
TseI GCWGC 5 cut(s) 284, 449, 656, 758, 1346
Tsp45I GTSAC 4 cut(s) 247, 326, 1177, 1370
TspDTI ATGAA 3 cut(s) 615, 702, 1567
TspGWI ACGGA 4 cut(s) 77, 391, 1523, 1770
Van91I CCANNNNNTGG 1 cut(s) 1387
VneI GTGCAC 1 cut(s) 1125
VpaK11BI GGWCC 2 cut(s) 97, 1399
XapI RAATTY 3 cut(s) 196, 935, 1665
XhoI CTCGAG 2 cut(s) 172, 663
XspI CTAG 2 cut(s) 281, 1746
ZraI GACGTC 1 cut(s) 846
ZrmI AGTACT 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.