RchiOBHm_Chr3g0467891

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0008293
Physical Location & Seq
Forward (+)
14019630 .. 14022163
2534 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43381

Sequence Viewer

Length: 1842 bp
ATGGACGATGATGATGTGTTAGGAGGTGAGAGGGACCTGGAGAAGGGGCTGCTGGAGCCCTCAACGCCGGGAACTCGATCGGAGCCGCCGATGTCACCGCACACATCGAGGCTGGCGCCGTTTTTGTCCAATTCCAGCAAGTCTCTGCTGGTTTCGAATTCTAGCAAGTCTCTGCTGGTTTCGAATTCCGGCAAGTCTCTGATGGTTTCTAATTCCAGCAAGTCTCTGGTTATGTCGAATTCCGGCCAGCGCTTGGATCAGAAGAAGAAGTACGTGCGGCAGGTGACCGGCCGCTTCAATGACACGGAGCTCCACCTGGCGGCGAAGCGGGGCGACGTCGCCGCCGTGAAGCATATCATCGGCGAGATTGATGCACAGATGATGGGGACCACGAGTGGGGCTGATTTTGATGCGGAGGTGGCTGAGATTAGGTCTGCGGTTGTGAATGAGGTCAATGAGTTGGGAGAGACGCCGCTTCTCGCCGCCGCCGAGAAGGGGCACCTTGGTGTGGTGAAGGAGCTCTTGCCTTTCACCACCGATGAGGGGATTTACATGAAGAATAGGATCGGCTACAATCCATTGCATATTGCTGCTAGTCAAGGGCACCATGCCATTATCCAGGTCCTGTTAGACCATGAACCAGGACTTAGCAAAACACTTGGCCCGTCAAATGCAACAGCTCTTGTGGCTGCAGCTACGAGAGGGCATACAGATGTGGTTAAGGAGTTAATGAATCATGATCCTAGCTTGGTAGAAATTTCTAAATCCAATGGTAAGAATGCATTGCATTTTGCGGCACGGCAGGGCCATGTAGATATTGTGAAAGCTTTACTTGACAAGGATCCACAACTAGTAAGAAGAATTGACAAGAAAGGACAGACTGCTTTGCATATGGCCGTAAAAGGTCATAGCTGTGAGGTGGTGAAGTTGCTACTTGACGCAGATTCAGCTCTTGTCATGCTCCCAGACAAGTTCGGTAATTTACCATTACATGTGGCCACGAGGAAGAAGAGAACAGAGATAGTAAATGAGTTGTTAGCCCTTCGTGACACAAATGTGAATGCTTTAACAAGAGAACAGAAAACACCCCTTGATATAGTTGAAGCACTTCCTCTCTCTGAAGAATCCACGGCAATTAAGGAAAGCTTAACTGAGTATGGTGGTCTCCGAGCCCAGGACCTTAACCGGCCAAGAGATGAGCTTAGAAACACAGTGTCAGCTATAAAAAAAGATGTCCACACTCAGCTGGATCAAGCCCGCAAGACCAGTCGGAGTGTTACTGGAATTGCCAAGGAGATCCGTAGGCTACAAAGGGAAGGAGTCAATATTGCAACTAACTCTGTCACAGTGGTTGCATCGCTCATCGCAACAATAGCATTTGCAGCTATATTTACTGTACCTGGTGGTGATTTAGATTCTGGGAAGTCTGTGACGGTTTCAACTACATCGTTCAAGATGTTTTATTTTTTTAATGCTATTTCACTCTTCGTAGCATTGGCTGTTGTCGTGGTACAGATCACCCTTATTCGGGGGGAGACGAAGACTGAGAGGAGGGTTATAACAGTGATTAATAAGGCGATGTGGTTGGCCTCTATGACCACTACAGTAGCATTTATTTCTGCAGCATATATAGTGGTTGGTCGACATAATCGGTGGGCCGCAATCTTTATCACAGTTATAGGAGGGATTATAATTTCAGCCGTTCTTTGTATCATGACATATTTTGTGATAAAGTCCAAAAAGATTCGTAGATTGAGAAAGAGAGAGAAGCTTCTTACAAGGACTGGATCCTCCTTGCACTCAGACTCCGGTTCAGAAGTGAATCGTGTTATGGCCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

613

Amino Acids

66.66

Weight (kDa)

9.49

Isoelectric Point (pI)

34.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 104 - 213 9.7e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 159 - 210 1.8e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 223 - 282 3e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 229 - 278 4.7e-08 Ankyrin repeats (many copies)
Ank_4 PF13637 262 - 312 2.1e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 277 - 314 3.8e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 288 - 354 6.6e-10 Ankyrin repeats (3 copies)
PGG PF13962 441 - 545 1.5e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1559, 1691
AarI CACCTGC 1 cut(s) 271
AatII GACGTC 1 cut(s) 339
Acc36I ACCTGC 1 cut(s) 271
AccB1I GGYRCC 3 cut(s) 115, 498, 603
AccB7I CCANNNNNTGG 1 cut(s) 253
AccI GTMKAC 1 cut(s) 1642
AclWI GGATC 9 cut(s) 264, 572, 734, 836, 849, 1257, 1291, 1782, 1795
AcoI YGGCCR 5 cut(s) 244, 289, 894, 996, 1187
AcsI RAATTY 4 cut(s) 157, 184, 238, 756
AcuI CTGAAG 1 cut(s) 1140
AcyI GRCGYC 3 cut(s) 116, 336, 470
AfaI GTAC 3 cut(s) 272, 1398, 1512
AfeI AGCGCT 1 cut(s) 251
AflIII ACRYGT 1 cut(s) 991
AgsI TTSAA 4 cut(s) 298, 1103, 1440, 1453
AhlI ACTAGT 1 cut(s) 850
AjnI CCWGG 6 cut(s) 36, 315, 618, 640, 1173, 1399
AleI CACNNNNGTG 2 cut(s) 504, 1055
Alw21I GWGCWC 2 cut(s) 312, 522
Alw26I GTCTC 7 cut(s) 147, 174, 201, 228, 461, 1169, 1529
AlwI GGATC 9 cut(s) 264, 572, 734, 836, 849, 1257, 1291, 1782, 1795
AlwNI CAGNNNCTG 1 cut(s) 625
Aor51HI AGCGCT 1 cut(s) 251
ApeKI GCWGC 6 cut(s) 49, 590, 689, 692, 1382, 1622
ApoI RAATTY 4 cut(s) 157, 184, 238, 756
AseI ATTAAT 1 cut(s) 1569
Asp700I GAANNNNTTC 1 cut(s) 1107
AspLEI GCGC 2 cut(s) 118, 252
AspS9I GGNCC 8 cut(s) 34, 387, 622, 662, 805, 1177, 1656, 1834
AsuC2I CCSGG 1 cut(s) 69
AsuHPI GGTGA 8 cut(s) 38, 87, 295, 523, 523, 934, 1418, 1510
AsuII TTCGAA 2 cut(s) 155, 182
AvaII GGWCC 4 cut(s) 34, 387, 622, 1177
BaeGI GKGCMC 2 cut(s) 501, 606
BalI TGGCCA 1 cut(s) 998
BamHI GGATCC 2 cut(s) 841, 1787
BanI GGYRCC 3 cut(s) 115, 498, 603
BanII GRGCYC 4 cut(s) 60, 312, 522, 1174
BarI GAAGNNNNNNTAC 2 cut(s) 254, 286
BauI CACGAG 2 cut(s) 391, 1000
BbsI GAAGAC 1 cut(s) 1547
Bbv12I GWGCWC 2 cut(s) 312, 522
BbvI GCAGC 6 cut(s) 36, 577, 676, 704, 1394, 1634
BccI CCATC 2 cut(s) 196, 376
BceAI ACGGC 6 cut(s) 103, 329, 815, 881, 1146, 1685
BcgI CGANNNNNNTGC 2 cut(s) 353, 387
BciT130I CCWGG 6 cut(s) 38, 317, 620, 642, 1175, 1401
BcnI CCSGG 1 cut(s) 69
BcoDI GTCTC 7 cut(s) 147, 174, 201, 228, 461, 1169, 1529
BcuI ACTAGT 1 cut(s) 850
BfaI CTAG 4 cut(s) 162, 594, 744, 851
BfmI CTRYAG 3 cut(s) 690, 1602, 1620
BfoI RGCGCY 2 cut(s) 119, 253
BfuAI ACCTGC 1 cut(s) 271
Bme1390I CCNGG 7 cut(s) 38, 69, 317, 620, 642, 1175, 1401
Bme18I GGWCC 4 cut(s) 34, 387, 622, 1177
BmgT120I GGNCC 8 cut(s) 34, 387, 622, 662, 805, 1177, 1656, 1834
BmiI GGNNCC 9 cut(s) 35, 57, 84, 117, 388, 500, 605, 843, 1789
BmrFI CCNGG 7 cut(s) 38, 69, 317, 620, 642, 1175, 1401
BmsI GCATC 3 cut(s) 361, 400, 1364
BpiI GAAGAC 1 cut(s) 1547
BpmI CTGGAG 2 cut(s) 59, 74
Bpu14I TTCGAA 2 cut(s) 155, 182
BpuMI CCSGG 1 cut(s) 69
BsaAI YACGTR 1 cut(s) 274
BsaHI GRCGYC 3 cut(s) 116, 336, 470
BsaI GGTCTC 1 cut(s) 1169
BsaJI CCNNGG 4 cut(s) 502, 1128, 1173, 1290
BsaWI WCCGGW 1 cut(s) 1808
BsaXI ACNNNNNCTCC 2 cut(s) 1790, 1820
Bse118I RCCGGY 2 cut(s) 287, 1185
Bse1I ACTGG 3 cut(s) 1266, 1285, 1789
Bse3DI GCAATG 2 cut(s) 578, 782
BseBI CCWGG 6 cut(s) 38, 317, 620, 642, 1175, 1401
BseDI CCNNGG 4 cut(s) 502, 1128, 1173, 1290
BseMI GCAATG 2 cut(s) 578, 782
BseMII CTCAG 5 cut(s) 414, 1143, 1256, 1536, 1815
BseNI ACTGG 3 cut(s) 1266, 1285, 1789
BseRI GAGGAG 1 cut(s) 1564
BseSI GKGCMC 2 cut(s) 501, 606
BseX3I CGGCCG 1 cut(s) 289
BseXI GCAGC 6 cut(s) 36, 577, 676, 704, 1394, 1634
Bsh1285I CGRYCG 2 cut(s) 80, 292
BshNI GGYRCC 3 cut(s) 115, 498, 603
BsiEI CGRYCG 2 cut(s) 80, 292
BsiHKAI GWGCWC 2 cut(s) 312, 522
BsiSI CCGG 6 cut(s) 68, 189, 243, 288, 1186, 1809
BslFI GGGAC 2 cut(s) 47, 400
BsmAI GTCTC 7 cut(s) 147, 174, 201, 228, 461, 1169, 1529
BsmBI CGTCTC 2 cut(s) 461, 1529
BsmFI GGGAC 2 cut(s) 47, 400
BsmI GAATGC 2 cut(s) 784, 1066
Bso31I GGTCTC 1 cut(s) 1169
Bsp119I TTCGAA 2 cut(s) 155, 182
Bsp1286I GDGCHC 6 cut(s) 60, 312, 501, 522, 606, 1174
Bsp143I GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
BspCNI CTCAG 5 cut(s) 415, 1144, 1255, 1537, 1814
BspHI TCATGA 2 cut(s) 736, 1713
BspLI GGNNCC 9 cut(s) 35, 57, 84, 117, 388, 500, 605, 843, 1789
BspMAI CTGCAG 2 cut(s) 694, 1624
BspMI ACCTGC 1 cut(s) 271
BspPI GGATC 9 cut(s) 264, 572, 734, 836, 849, 1257, 1291, 1782, 1795
BspT104I TTCGAA 2 cut(s) 155, 182
BspT107I GGYRCC 3 cut(s) 115, 498, 603
BspTNI GGTCTC 1 cut(s) 1169
BsrDI GCAATG 2 cut(s) 578, 782
BsrFI RCCGGY 2 cut(s) 287, 1185
BsrI ACTGG 3 cut(s) 1266, 1285, 1789
BssAI RCCGGY 2 cut(s) 287, 1185
BssECI CCNNGG 4 cut(s) 502, 1128, 1173, 1290
BssMI GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
BssNI GRCGYC 3 cut(s) 116, 336, 470
BssSI CACGAG 2 cut(s) 391, 1000
BssT1I CCWWGG 2 cut(s) 502, 1290
Bst2BI CACGAG 2 cut(s) 391, 1000
Bst2UI CCWGG 6 cut(s) 38, 317, 620, 642, 1175, 1401
Bst4CI ACNGT 7 cut(s) 1213, 1348, 1396, 1435, 1564, 1606, 1675
Bst6I CTCTTC 2 cut(s) 1004, 1490
BstACI GRCGYC 3 cut(s) 116, 336, 470
BstBAI YACGTR 1 cut(s) 274
BstBI TTCGAA 2 cut(s) 155, 182
BstC8I GCNNGC 3 cut(s) 114, 248, 1258
BstDEI CTNAG 7 cut(s) 423, 647, 1152, 1202, 1242, 1545, 1801
BstDSI CCRYGG 1 cut(s) 1128
BstEII GGTNACC 1 cut(s) 283
BstENI CCTNNNNNAGG 1 cut(s) 41
BstH2I RGCGCY 2 cut(s) 119, 253
BstHHI GCGC 2 cut(s) 118, 252
BstKTI GATC 9 cut(s) 80, 259, 567, 742, 844, 1252, 1299, 1518, 1790
BstMAI GTCTC 7 cut(s) 147, 174, 201, 228, 461, 1169, 1529
BstMBI GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
BstMCI CGRYCG 2 cut(s) 80, 292
BstMWI GCNNNNNNNGC 7 cut(s) 55, 64, 419, 686, 947, 1373, 1382
BstNI CCWGG 6 cut(s) 38, 317, 620, 642, 1175, 1401
BstNSI RCATGY 1 cut(s) 995
BstPI GGTNACC 1 cut(s) 283
BstSCI CCNGG 7 cut(s) 36, 67, 315, 618, 640, 1173, 1399
BstSFI CTRYAG 3 cut(s) 690, 1602, 1620
BstSLI GKGCMC 2 cut(s) 501, 606
BstV1I GCAGC 6 cut(s) 36, 577, 676, 704, 1394, 1634
BstV2I GAAGAC 1 cut(s) 1547
BstX2I RGATCY 3 cut(s) 841, 1296, 1787
BstYI RGATCY 3 cut(s) 841, 1296, 1787
BstZI CGGCCG 1 cut(s) 289
BtgI CCRYGG 1 cut(s) 1128
BtgZI GCGATG 3 cut(s) 1341, 1348, 1592
BtsIMutI CAGTG 3 cut(s) 1218, 1353, 1569
BveI ACCTGC 1 cut(s) 271
Cac8I GCNNGC 3 cut(s) 114, 248, 1258
CaiI CAGNNNCTG 1 cut(s) 625
CciI TCATGA 2 cut(s) 736, 1713
CfoI GCGC 2 cut(s) 118, 252
Cfr10I RCCGGY 2 cut(s) 287, 1185
Cfr13I GGNCC 8 cut(s) 34, 387, 622, 662, 805, 1177, 1656, 1834
CseI GACGC 2 cut(s) 478, 947
CsiI ACCWGGT 1 cut(s) 1399
Csp6I GTAC 3 cut(s) 271, 1397, 1511
CviAII CATG 8 cut(s) 553, 608, 635, 737, 809, 958, 992, 1714
CviQI GTAC 3 cut(s) 271, 1397, 1511
DdeI CTNAG 7 cut(s) 423, 647, 1152, 1202, 1242, 1545, 1801
DinI GGCGCC 1 cut(s) 117
DpnI GATC 9 cut(s) 79, 258, 566, 741, 843, 1251, 1298, 1517, 1789
DpnII GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
EaeI YGGCCR 5 cut(s) 244, 289, 894, 996, 1187
EagI CGGCCG 1 cut(s) 289
Eam1104I CTCTTC 2 cut(s) 1004, 1490
EarI CTCTTC 2 cut(s) 1004, 1490
Ecl136II GAGCTC 2 cut(s) 310, 520
EclXI CGGCCG 1 cut(s) 289
Eco130I CCWWGG 2 cut(s) 502, 1290
Eco24I GRGCYC 4 cut(s) 60, 312, 522, 1174
Eco31I GGTCTC 1 cut(s) 1169
Eco47I GGWCC 4 cut(s) 34, 387, 622, 1177
Eco47III AGCGCT 1 cut(s) 251
Eco52I CGGCCG 1 cut(s) 289
Eco53kI GAGCTC 2 cut(s) 310, 520
Eco57I CTGAAG 1 cut(s) 1140
Eco91I GGTNACC 1 cut(s) 283
EcoICRI GAGCTC 2 cut(s) 310, 520
EcoNI CCTNNNNNAGG 1 cut(s) 41
EcoO109I RGGNCCY 3 cut(s) 34, 622, 1177
EcoO65I GGTNACC 1 cut(s) 283
EcoRI GAATTC 3 cut(s) 157, 184, 238
EcoRII CCWGG 6 cut(s) 36, 315, 618, 640, 1173, 1399
EcoT14I CCWWGG 2 cut(s) 502, 1290
EcoT22I ATGCAT 1 cut(s) 784
EcoT38I GRGCYC 4 cut(s) 60, 312, 522, 1174
EgeI GGCGCC 1 cut(s) 117
EheI GGCGCC 1 cut(s) 117
ErhI CCWWGG 2 cut(s) 502, 1290
Esp3I CGTCTC 2 cut(s) 461, 1529
FaeI CATG 8 cut(s) 556, 611, 638, 740, 812, 961, 995, 1717
FalI AAGNNNNNCTT 6 cut(s) 506, 538, 816, 848, 1130, 1162
FaqI GGGAC 2 cut(s) 47, 400
FatI CATG 8 cut(s) 552, 607, 634, 736, 808, 957, 991, 1713
FauI CCCGC 2 cut(s) 321, 1265
FauNDI CATATG 1 cut(s) 891
FblI GTMKAC 1 cut(s) 1642
FriOI GRGCYC 4 cut(s) 60, 312, 522, 1174
FspBI CTAG 4 cut(s) 162, 594, 744, 851
GlaI GCGC 2 cut(s) 117, 251
GsuI CTGGAG 2 cut(s) 59, 74
HaeII RGCGCY 2 cut(s) 119, 253
HapII CCGG 6 cut(s) 68, 189, 243, 288, 1186, 1809
HgaI GACGC 2 cut(s) 478, 947
HhaI GCGC 2 cut(s) 118, 252
Hin1I GRCGYC 3 cut(s) 116, 336, 470
Hin1II CATG 8 cut(s) 556, 611, 638, 740, 812, 961, 995, 1717
Hin6I GCGC 2 cut(s) 116, 250
HinP1I GCGC 2 cut(s) 116, 250
HincII GTYRAC 1 cut(s) 1643
HindII GTYRAC 1 cut(s) 1643
HindIII AAGCTT 3 cut(s) 825, 1144, 1769
HinfI GANTC 8 cut(s) 733, 944, 1124, 1320, 1415, 1744, 1805, 1822
HpaII CCGG 6 cut(s) 68, 189, 243, 288, 1186, 1809
HphI GGTGA 8 cut(s) 38, 87, 295, 523, 523, 934, 1418, 1510
Hpy166II GTNNAC 2 cut(s) 1237, 1643
Hpy188I TCNGA 8 cut(s) 82, 201, 261, 1120, 1169, 1272, 1804, 1816
Hpy188III TCNNGA 4 cut(s) 737, 1046, 1453, 1714
Hpy8I GTNNAC 2 cut(s) 1237, 1643
Hpy99I CGWCG 2 cut(s) 338, 341
HpyAV CCTTC 5 cut(s) 37, 487, 508, 1052, 1310
HpyCH4III ACNGT 7 cut(s) 1213, 1348, 1396, 1435, 1564, 1606, 1675
HpyCH4IV ACGT 2 cut(s) 273, 336
HpyF10VI GCNNNNNNNGC 7 cut(s) 55, 64, 419, 686, 947, 1373, 1382
HpyF3I CTNAG 7 cut(s) 423, 647, 1152, 1202, 1242, 1545, 1801
HpySE526I ACGT 2 cut(s) 273, 336
Hsp92I GRCGYC 3 cut(s) 116, 336, 470
Hsp92II CATG 8 cut(s) 556, 611, 638, 740, 812, 961, 995, 1717
HspAI GCGC 2 cut(s) 116, 250
KasI GGCGCC 1 cut(s) 115
Kzo9I GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
LmnI GCTCC 6 cut(s) 55, 82, 307, 315, 517, 966
Lsp1109I GCAGC 6 cut(s) 36, 577, 676, 704, 1394, 1634
LweI GCATC 3 cut(s) 361, 400, 1364
MabI ACCWGGT 1 cut(s) 1399
MaeI CTAG 4 cut(s) 162, 594, 744, 851
MaeII ACGT 2 cut(s) 273, 336
MaeIII GTNAC 6 cut(s) 93, 283, 1046, 1276, 1342, 1429
MalI GATC 9 cut(s) 79, 258, 566, 741, 843, 1251, 1298, 1517, 1789
MboI GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
MboII GAAGA 9 cut(s) 274, 277, 568, 870, 1018, 1021, 1133, 1477, 1552
MflI RGATCY 3 cut(s) 841, 1296, 1787
MhlI GDGCHC 6 cut(s) 60, 312, 501, 522, 606, 1174
MlsI TGGCCA 1 cut(s) 998
MluNI TGGCCA 1 cut(s) 998
Mly113I GGCGCC 1 cut(s) 116
MlyI GAGTC 2 cut(s) 1329, 1799
MmeI TCCRAC 1 cut(s) 1250
Mox20I TGGCCA 1 cut(s) 998
Mph1103I ATGCAT 1 cut(s) 784
MroXI GAANNNNTTC 1 cut(s) 1107
MscI TGGCCA 1 cut(s) 998
MseI TTAA 9 cut(s) 720, 728, 1067, 1137, 1148, 1182, 1470, 1569, 1840
MslI CAYNNNNRTG 4 cut(s) 504, 711, 912, 1055
Msp20I TGGCCA 1 cut(s) 998
MspA1I CMGCKG 1 cut(s) 1246
MspI CCGG 6 cut(s) 68, 189, 243, 288, 1186, 1809
MspR9I CCNGG 7 cut(s) 38, 69, 317, 620, 642, 1175, 1401
Mva1269I GAATGC 2 cut(s) 784, 1066
MvaI CCWGG 6 cut(s) 38, 317, 620, 642, 1175, 1401
MwoI GCNNNNNNNGC 7 cut(s) 55, 64, 419, 686, 947, 1373, 1382
NarI GGCGCC 1 cut(s) 116
NciI CCSGG 1 cut(s) 69
NdeI CATATG 1 cut(s) 891
NdeII GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
NlaIII CATG 8 cut(s) 556, 611, 638, 740, 812, 961, 995, 1717
NlaIV GGNNCC 9 cut(s) 35, 57, 84, 117, 388, 500, 605, 843, 1789
NmeAIII GCCGAG 1 cut(s) 514
NmuCI GTSAC 5 cut(s) 93, 283, 1046, 1342, 1429
NsiI ATGCAT 1 cut(s) 784
NspI RCATGY 1 cut(s) 995
NspV TTCGAA 2 cut(s) 155, 182
OliI CACNNNNGTG 2 cut(s) 504, 1055
PagI TCATGA 2 cut(s) 736, 1713
PaqCI CACCTGC 1 cut(s) 271
PciI ACATGT 1 cut(s) 991
PcsI WCGNNNNNNNCGW 3 cut(s) 86, 342, 486
PctI GAATGC 2 cut(s) 784, 1066
PdmI GAANNNNTTC 1 cut(s) 1107
PfeI GAWTC 6 cut(s) 733, 944, 1124, 1415, 1744, 1822
PflMI CCANNNNNTGG 1 cut(s) 253
Ple19I CGATCG 1 cut(s) 80
PleI GAGTC 2 cut(s) 1328, 1799
PluTI GGCGCC 1 cut(s) 119
PpsI GAGTC 2 cut(s) 1328, 1799
Ppu21I YACGTR 1 cut(s) 274
PpuMI RGGWCCY 3 cut(s) 34, 622, 1177
PscI ACATGT 1 cut(s) 991
PshBI ATTAAT 1 cut(s) 1569
PsiI TTATAA 2 cut(s) 1559, 1691
Psp124BI GAGCTC 2 cut(s) 312, 522
Psp5II RGGWCCY 3 cut(s) 34, 622, 1177
Psp6I CCWGG 6 cut(s) 36, 315, 618, 640, 1173, 1399
PspEI GGTNACC 1 cut(s) 283
PspGI CCWGG 6 cut(s) 36, 315, 618, 640, 1173, 1399
PspN4I GGNNCC 9 cut(s) 35, 57, 84, 117, 388, 500, 605, 843, 1789
PspPI GGNCC 8 cut(s) 34, 387, 622, 662, 805, 1177, 1656, 1834
PspPPI RGGWCCY 3 cut(s) 34, 622, 1177
PstI CTGCAG 2 cut(s) 694, 1624
PstNI CAGNNNCTG 1 cut(s) 625
PsuI RGATCY 3 cut(s) 841, 1296, 1787
PvuI CGATCG 1 cut(s) 80
PvuII CAGCTG 1 cut(s) 1246
RsaI GTAC 3 cut(s) 272, 1398, 1512
RsaNI GTAC 3 cut(s) 271, 1397, 1511
RseI CAYNNNNRTG 4 cut(s) 504, 711, 912, 1055
SacI GAGCTC 2 cut(s) 312, 522
SalI GTCGAC 1 cut(s) 1641
SaqAI TTAA 9 cut(s) 720, 728, 1067, 1137, 1148, 1182, 1470, 1569, 1840
Sau3AI GATC 9 cut(s) 77, 256, 564, 739, 841, 1249, 1296, 1515, 1787
Sau96I GGNCC 8 cut(s) 34, 387, 622, 662, 805, 1177, 1656, 1834
SchI GAGTC 2 cut(s) 1329, 1799
ScrFI CCNGG 7 cut(s) 38, 69, 317, 620, 642, 1175, 1401
SduI GDGCHC 6 cut(s) 60, 312, 501, 522, 606, 1174
SexAI ACCWGGT 1 cut(s) 1399
SfaNI GCATC 3 cut(s) 361, 400, 1364
SfcI CTRYAG 3 cut(s) 690, 1602, 1620
SfoI GGCGCC 1 cut(s) 117
SfuI TTCGAA 2 cut(s) 155, 182
SinI GGWCC 4 cut(s) 34, 387, 622, 1177
SmiMI CAYNNNNRTG 4 cut(s) 504, 711, 912, 1055
SpeI ACTAGT 1 cut(s) 850
SspDI GGCGCC 1 cut(s) 115
SspI AATATT 1 cut(s) 1327
SspMI CTAG 4 cut(s) 162, 594, 744, 851
SstI GAGCTC 2 cut(s) 312, 522
StyD4I CCNGG 7 cut(s) 36, 67, 315, 618, 640, 1173, 1399
StyI CCWWGG 2 cut(s) 502, 1290
TaaI ACNGT 7 cut(s) 1213, 1348, 1396, 1435, 1564, 1606, 1675
TaiI ACGT 2 cut(s) 276, 339
TaqI TCGA 6 cut(s) 76, 107, 155, 182, 236, 1642
TfiI GAWTC 6 cut(s) 733, 944, 1124, 1415, 1744, 1822
Tru1I TTAA 9 cut(s) 720, 728, 1067, 1137, 1148, 1182, 1470, 1569, 1840
Tru9I TTAA 9 cut(s) 720, 728, 1067, 1137, 1148, 1182, 1470, 1569, 1840
TscAI CASTG 3 cut(s) 1218, 1353, 1569
TseFI GTSAC 5 cut(s) 93, 283, 1046, 1342, 1429
TseI GCWGC 6 cut(s) 49, 590, 689, 692, 1382, 1622
Tsp45I GTSAC 5 cut(s) 93, 283, 1046, 1342, 1429
TspDTI ATGAA 3 cut(s) 569, 651, 746
TspGWI ACGGA 2 cut(s) 320, 1289
TspRI CASTG 3 cut(s) 1218, 1353, 1569
Van91I CCANNNNNTGG 1 cut(s) 253
VpaK11BI GGWCC 4 cut(s) 34, 387, 622, 1177
VspI ATTAAT 1 cut(s) 1569
XagI CCTNNNNNAGG 1 cut(s) 41
XapI RAATTY 4 cut(s) 157, 184, 238, 756
XceI RCATGY 1 cut(s) 995
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XmiI GTMKAC 1 cut(s) 1642
XmnI GAANNNNTTC 1 cut(s) 1107
XspI CTAG 4 cut(s) 162, 594, 744, 851
ZraI GACGTC 1 cut(s) 337
Zsp2I ATGCAT 1 cut(s) 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.