pycom12g12860

Ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
15323048 .. 15324944
1897 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g12860.2

Sequence Viewer

Length: 1461 bp
ATGGTGGGATCCGAGTTTGATGAAGAGGTGGAGGAGATGAGGTCTGCTATTGTGAATGAGGTGAATGAGTTGGGAGAGACGGCACTTTTCATAGCAGCGGAGCAGGGCCATCTTGCTATAGTGGAGGAGCTTCTGCCTTACATGACGGAGGAGGGTATTTTGTTGAAGAATCAAATTGGGTTTGATGCATTGCATATTGCTGCAAATAAAGGGCACCAAGCCATTGTCCAGGTGCTCTTAGACCATGACCCGGGGCTTAGCAAAACAGTTGGCCAGGCAAATGCTACCCCTCTTGTGTCTGCTGCTACAAGAGGGCATACAGCCGTCGTTAAAGAATTACTATCCAAAGATTCTAGTTTGCTGGAAGTAGCGAAATCCAATGGGAAAAATGCATTACATCTTGCTGCGCGACAGGGGCATGTAGAAATTGTGAAAACTTTGCTTGGCAAGGATCCACAACTAGCAAGAAGAATTGATAAGAAAGGACAAACTGCTCTGCATATGGCCGTAAAAGGTCATAGCAGTGAAGTTGTGAGGTTGATTGTCGATGCGGATCGATCTATTGTCATGCTTCCAGACAAGTTCGGCAATTCAGCATTGCATGTGGCCACCAGGAAAAAGCGAGTAGATATAGTCAATGTGCTGTTGCTCGTTCGTGATACAAATGTGAATGCACTAACAAGAGACCAGAAAACACCTCTTGATATAGCCGAAGGACTTCCATACTCTGAAGAGATCACAACAATTAAGGAAACCTTGACTCAATATGGTGCTTTCCGAGCAAATGAACTTAACCAGCCACGGGATGAGCTTAGAAACACCGTGACAGAGATACAAAAAAATGTCCATAATCAGCTTGAACAAGCCCGCAAAACAAACCAGAGTGTCACTGGAATTGCCAAGGAGCTCCGCAAGCTACAGAGGGAAGGAATCAATAATGCCACTAACTCGGTCACAGTGGTTGCTTCACTCTTTGCAACAGTAGCTTTTGCAGCTATATTTACACTTCCTGGCGGTGACTTTGACACCGGGGCAGCTGTTGTGTCAATCCGAGTATCATTTAAAATTTTTATCCTTTCCAATGCCGTTTCACTCTTCTCATCATTGGCTGTTGTTTTGGTACAAATCACCCTCGTCAGGGGGGAGACAAAGACGGAGAGGAGGGTTGTGGAAGTGATCGATAAGTTGATGTGGCTAGCCTCCGTCTGCACTACAGTAGCATTTATTTCTTCATCGTATATAGTGGTTGGGCGGCATAATGTGTGGGCTGCAATCCTTGTCACATTTATAGGGGGACTTACAATTGGGGGAGTTATTGGTACCATGACATATTATGTGGTGAAGACCAAAAGGCTTCGCAGACTGAGGAAGAGAGAGAAGATGTCGAGGAGGAATGGAACTAACTATTCCATGCGTCACTCGGAGTCTGATTCAGAAGTGAACCGTATTTATGCCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

487

Amino Acids

53.39

Weight (kDa)

9.24

Isoelectric Point (pI)

33.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1319
AccB1I GGYRCC 2 cut(s) 213, 1319
AccII CGCG 1 cut(s) 409
AciI CCGC 6 cut(s) 98, 551, 868, 910, 1014, 1252
AclWI GGATC 5 cut(s) 3, 16, 446, 459, 561
AcoI YGGCCR 3 cut(s) 271, 504, 606
AcsI RAATTY 1 cut(s) 1065
AcuI CTGAAG 1 cut(s) 750
AfaI GTAC 2 cut(s) 1122, 1321
AfiI CCNNNNNNNGG 4 cut(s) 250, 802, 1137, 1138
AgsI TTSAA 2 cut(s) 166, 860
AjnI CCWGG 4 cut(s) 228, 273, 611, 1009
AluBI AGCT 8 cut(s) 130, 811, 856, 907, 916, 986, 995, 1037
AluI AGCT 8 cut(s) 130, 811, 856, 907, 916, 986, 995, 1037
Alw21I GWGCWC 2 cut(s) 237, 909
Alw26I GTCTC 3 cut(s) 71, 678, 1139
AlwI GGATC 5 cut(s) 3, 16, 446, 459, 561
Ama87I CYCGRG 1 cut(s) 250
AoxI GGCC 4 cut(s) 106, 271, 504, 606
ApeKI GCWGC 7 cut(s) 95, 200, 302, 404, 992, 1034, 1268
ApoI RAATTY 1 cut(s) 1065
Asp700I GAANNNNTTC 1 cut(s) 717
Asp718I GGTACC 1 cut(s) 1319
AspLEI GCGC 1 cut(s) 409
AspS9I GGNCC 1 cut(s) 106
AsuC2I CCSGG 3 cut(s) 251, 252, 1030
AsuHPI GGTGA 4 cut(s) 73, 1028, 1120, 1351
AsuNHI GCTAGC 1 cut(s) 1195
AvaI CYCGRG 1 cut(s) 250
BaeGI GKGCMC 1 cut(s) 216
BaeI ACNNNNGTAYC 2 cut(s) 651, 684
BalI TGGCCA 2 cut(s) 273, 608
BamHI GGATCC 2 cut(s) 8, 451
BanI GGYRCC 2 cut(s) 213, 1319
BanII GRGCYC 1 cut(s) 909
BbsI GAAGAC 1 cut(s) 1349
Bbv12I GWGCWC 2 cut(s) 237, 909
BbvI GCAGC 7 cut(s) 107, 187, 289, 391, 1004, 1046, 1255
BccI CCATC 1 cut(s) 117
BceAI ACGGC 4 cut(s) 96, 308, 491, 1070
BciT130I CCWGG 4 cut(s) 230, 275, 613, 1011
BcnI CCSGG 3 cut(s) 251, 252, 1030
BcoDI GTCTC 3 cut(s) 71, 678, 1139
BfaI CTAG 3 cut(s) 354, 461, 1196
BfmI CTRYAG 3 cut(s) 117, 917, 1212
BisI GCNGC 8 cut(s) 96, 201, 303, 405, 993, 1035, 1253, 1269
BlpI GCTNAGC 1 cut(s) 257
BlsI GCNGC 8 cut(s) 97, 202, 304, 406, 994, 1036, 1254, 1270
Bme1390I CCNGG 7 cut(s) 230, 251, 252, 275, 613, 1011, 1030
BmeT110I CYCGRG 1 cut(s) 250
BmgT120I GGNCC 1 cut(s) 106
BmiI GGNNCC 4 cut(s) 10, 215, 453, 1321
BmrFI CCNGG 7 cut(s) 230, 251, 252, 275, 613, 1011, 1030
BmsI GCATC 2 cut(s) 175, 538
BmtI GCTAGC 1 cut(s) 1199
BpiI GAAGAC 1 cut(s) 1349
Bpu1102I GCTNAGC 1 cut(s) 257
BpuMI CCSGG 3 cut(s) 251, 252, 1030
Bsa29I ATCGAT 2 cut(s) 556, 1179
BsaBI GATNNNNATC 1 cut(s) 552
BsaI GGTCTC 1 cut(s) 678
BsaJI CCNNGG 5 cut(s) 250, 251, 800, 900, 1029
BsaXI ACNNNNNCTCC 2 cut(s) 26, 56
Bsc4I CCNNNNNNNGG 4 cut(s) 250, 802, 1137, 1138
Bse1I ACTGG 1 cut(s) 895
Bse3DI GCAATG 2 cut(s) 188, 596
Bse8I GATNNNNATC 1 cut(s) 552
BseBI CCWGG 4 cut(s) 230, 275, 613, 1011
BseCI ATCGAT 2 cut(s) 556, 1179
BseDI CCNNGG 5 cut(s) 250, 251, 800, 900, 1029
BseGI GGATG 1 cut(s) 811
BseJI GATNNNNATC 1 cut(s) 552
BseLI CCNNNNNNNGG 4 cut(s) 250, 802, 1137, 1138
BseMI GCAATG 2 cut(s) 188, 596
BseMII CTCAG 1 cut(s) 1355
BseNI ACTGG 1 cut(s) 895
BseRI GAGGAG 5 cut(s) 47, 140, 164, 1174, 1402
BseSI GKGCMC 1 cut(s) 216
BseXI GCAGC 7 cut(s) 107, 187, 289, 391, 1004, 1046, 1255
BsgI GTGCAG 1 cut(s) 1192
Bsh1236I CGCG 1 cut(s) 409
BshFI GGCC 4 cut(s) 108, 273, 506, 608
BshNI GGYRCC 2 cut(s) 213, 1319
BshVI ATCGAT 2 cut(s) 556, 1179
BsiHKAI GWGCWC 2 cut(s) 237, 909
BsiHKCI CYCGRG 1 cut(s) 250
BsiSI CCGG 2 cut(s) 251, 1029
BslFI GGGAC 1 cut(s) 1308
BslI CCNNNNNNNGG 4 cut(s) 250, 802, 1137, 1138
BsmAI GTCTC 3 cut(s) 71, 678, 1139
BsmBI CGTCTC 1 cut(s) 71
BsmFI GGGAC 1 cut(s) 1308
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 4 cut(s) 108, 273, 506, 608
Bso31I GGTCTC 1 cut(s) 678
BsoBI CYCGRG 1 cut(s) 250
Bsp1286I GDGCHC 3 cut(s) 216, 237, 909
Bsp143I GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
Bsp1720I GCTNAGC 1 cut(s) 257
BspACI CCGC 6 cut(s) 98, 551, 868, 910, 1014, 1252
BspANI GGCC 4 cut(s) 108, 273, 506, 608
BspCNI CTCAG 1 cut(s) 1356
BspDI ATCGAT 2 cut(s) 556, 1179
BspFNI CGCG 1 cut(s) 409
BspLI GGNNCC 4 cut(s) 10, 215, 453, 1321
BspOI GCTAGC 1 cut(s) 1199
BspPI GGATC 5 cut(s) 3, 16, 446, 459, 561
BspT107I GGYRCC 2 cut(s) 213, 1319
BspTNI GGTCTC 1 cut(s) 678
BsrDI GCAATG 2 cut(s) 188, 596
BsrI ACTGG 1 cut(s) 895
BssECI CCNNGG 5 cut(s) 250, 251, 800, 900, 1029
BssMI GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
BssT1I CCWWGG 1 cut(s) 900
Bst2UI CCWGG 4 cut(s) 230, 275, 613, 1011
Bst4CI ACNGT 6 cut(s) 268, 823, 958, 982, 1216, 1445
Bst6I CTCTTC 4 cut(s) 18, 726, 1100, 1364
BstC8I GCNNGC 3 cut(s) 868, 914, 1197
BstDEI CTNAG 4 cut(s) 238, 257, 812, 1364
BstDSI CCRYGG 1 cut(s) 800
BstF5I GGATG 1 cut(s) 811
BstFNI CGCG 1 cut(s) 409
BstHHI GCGC 1 cut(s) 409
BstKTI GATC 6 cut(s) 11, 454, 556, 560, 738, 1179
BstMAI GTCTC 3 cut(s) 71, 678, 1139
BstMBI GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
BstMWI GCNNNNNNNGC 5 cut(s) 415, 779, 913, 983, 992
BstNI CCWGG 4 cut(s) 230, 275, 613, 1011
BstNSI RCATGY 2 cut(s) 422, 605
BstSCI CCNGG 7 cut(s) 228, 249, 250, 273, 611, 1009, 1028
BstSFI CTRYAG 3 cut(s) 117, 917, 1212
BstSLI GKGCMC 1 cut(s) 216
BstUI CGCG 1 cut(s) 409
BstV1I GCAGC 7 cut(s) 107, 187, 289, 391, 1004, 1046, 1255
BstV2I GAAGAC 1 cut(s) 1349
BstX2I RGATCY 2 cut(s) 8, 451
BstYI RGATCY 2 cut(s) 8, 451
Bsu15I ATCGAT 2 cut(s) 556, 1179
BsuRI GGCC 4 cut(s) 108, 273, 506, 608
BsuTUI ATCGAT 2 cut(s) 556, 1179
BtgI CCRYGG 1 cut(s) 800
BtsCI GGATG 1 cut(s) 811
BtsI GCAGTG 1 cut(s) 529
BtsIMutI CAGTG 3 cut(s) 529, 888, 963
Cac8I GCNNGC 3 cut(s) 868, 914, 1197
CfoI GCGC 1 cut(s) 409
Cfr13I GGNCC 1 cut(s) 106
Cfr9I CCCGGG 1 cut(s) 250
ClaI ATCGAT 2 cut(s) 556, 1179
CseI GACGC 1 cut(s) 1403
Csp6I GTAC 2 cut(s) 1121, 1320
CviAII CATG 7 cut(s) 142, 245, 419, 568, 602, 1324, 1411
CviQI GTAC 2 cut(s) 1121, 1320
DdeI CTNAG 4 cut(s) 238, 257, 812, 1364
DpnI GATC 6 cut(s) 10, 453, 555, 559, 737, 1178
DpnII GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
DraI TTTAAA 1 cut(s) 1063
EaeI YGGCCR 3 cut(s) 271, 504, 606
Eam1104I CTCTTC 4 cut(s) 18, 726, 1100, 1364
EarI CTCTTC 4 cut(s) 18, 726, 1100, 1364
Ecl136II GAGCTC 1 cut(s) 907
Eco130I CCWWGG 1 cut(s) 900
Eco24I GRGCYC 1 cut(s) 909
Eco31I GGTCTC 1 cut(s) 678
Eco53kI GAGCTC 1 cut(s) 907
Eco57I CTGAAG 1 cut(s) 750
Eco88I CYCGRG 1 cut(s) 250
EcoICRI GAGCTC 1 cut(s) 907
EcoRII CCWGG 4 cut(s) 228, 273, 611, 1009
EcoT14I CCWWGG 1 cut(s) 900
EcoT22I ATGCAT 2 cut(s) 190, 394
EcoT38I GRGCYC 1 cut(s) 909
ErhI CCWWGG 1 cut(s) 900
Esp3I CGTCTC 1 cut(s) 71
FaeI CATG 7 cut(s) 145, 248, 422, 571, 605, 1327, 1414
FalI AAGNNNNNCTT 2 cut(s) 740, 772
FaqI GGGAC 1 cut(s) 1308
FatI CATG 7 cut(s) 141, 244, 418, 567, 601, 1323, 1410
FauI CCCGC 1 cut(s) 875
FauNDI CATATG 1 cut(s) 501
Fnu4HI GCNGC 8 cut(s) 96, 201, 303, 405, 993, 1035, 1253, 1269
FokI GGATG 1 cut(s) 818
FriOI GRGCYC 1 cut(s) 909
Fsp4HI GCNGC 8 cut(s) 96, 201, 303, 405, 993, 1035, 1253, 1269
FspBI CTAG 3 cut(s) 354, 461, 1196
GlaI GCGC 1 cut(s) 408
GluI GCNGC 8 cut(s) 96, 201, 303, 405, 993, 1035, 1253, 1269
HaeIII GGCC 4 cut(s) 108, 273, 506, 608
HapII CCGG 2 cut(s) 251, 1029
HgaI GACGC 1 cut(s) 1403
HhaI GCGC 1 cut(s) 409
Hin1II CATG 7 cut(s) 145, 248, 422, 571, 605, 1327, 1414
Hin6I GCGC 1 cut(s) 407
HinP1I GCGC 1 cut(s) 407
HinfI GANTC 6 cut(s) 169, 350, 760, 930, 1424, 1430
HpaII CCGG 2 cut(s) 251, 1029
HphI GGTGA 4 cut(s) 73, 1028, 1120, 1351
Hpy166II GTNNAC 1 cut(s) 1441
Hpy188I TCNGA 7 cut(s) 13, 730, 779, 1052, 1423, 1429, 1435
Hpy188III TCNNGA 3 cut(s) 575, 656, 701
Hpy8I GTNNAC 1 cut(s) 1441
Hpy99I CGWCG 1 cut(s) 329
HpyAV CCTTC 2 cut(s) 707, 920
HpyCH4III ACNGT 6 cut(s) 268, 823, 958, 982, 1216, 1445
HpyF10VI GCNNNNNNNGC 5 cut(s) 415, 779, 913, 983, 992
HpyF3I CTNAG 4 cut(s) 238, 257, 812, 1364
Hsp92II CATG 7 cut(s) 145, 248, 422, 571, 605, 1327, 1414
HspAI GCGC 1 cut(s) 407
KpnI GGTACC 1 cut(s) 1323
Kzo9I GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
LmnI GCTCC 4 cut(s) 100, 127, 904, 912
Lsp1109I GCAGC 7 cut(s) 107, 187, 289, 391, 1004, 1046, 1255
LweI GCATC 2 cut(s) 175, 538
MaeI CTAG 3 cut(s) 354, 461, 1196
MaeIII GTNAC 6 cut(s) 823, 886, 952, 1016, 1279, 1415
MalI GATC 6 cut(s) 10, 453, 555, 559, 737, 1178
MboI GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
MboII GAAGA 9 cut(s) 35, 178, 480, 743, 1087, 1221, 1354, 1381, 1390
MfeI CAATTG 1 cut(s) 1302
MflI RGATCY 2 cut(s) 8, 451
MhlI GDGCHC 3 cut(s) 216, 237, 909
MlsI TGGCCA 2 cut(s) 273, 608
MluCI AATT 9 cut(s) 174, 335, 426, 471, 589, 744, 894, 1065, 1302
MluNI TGGCCA 2 cut(s) 273, 608
MlyI GAGTC 2 cut(s) 754, 1433
Mox20I TGGCCA 2 cut(s) 273, 608
Mph1103I ATGCAT 2 cut(s) 190, 394
MroXI GAANNNNTTC 1 cut(s) 717
MscI TGGCCA 2 cut(s) 273, 608
MseI TTAA 4 cut(s) 330, 747, 792, 1062
MslI CAYNNNNRTG 1 cut(s) 522
Msp20I TGGCCA 2 cut(s) 273, 608
MspA1I CMGCKG 2 cut(s) 98, 1037
MspI CCGG 2 cut(s) 251, 1029
MspR9I CCNGG 7 cut(s) 230, 251, 252, 275, 613, 1011, 1030
MunI CAATTG 1 cut(s) 1302
Mva1269I GAATGC 1 cut(s) 676
MvaI CCWGG 4 cut(s) 230, 275, 613, 1011
MvnI CGCG 1 cut(s) 409
MwoI GCNNNNNNNGC 5 cut(s) 415, 779, 913, 983, 992
NciI CCSGG 3 cut(s) 251, 252, 1030
NdeI CATATG 1 cut(s) 501
NdeII GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
NheI GCTAGC 1 cut(s) 1195
NlaIII CATG 7 cut(s) 145, 248, 422, 571, 605, 1327, 1414
NlaIV GGNNCC 4 cut(s) 10, 215, 453, 1321
NmuCI GTSAC 6 cut(s) 823, 886, 952, 1016, 1279, 1415
NsiI ATGCAT 2 cut(s) 190, 394
NspI RCATGY 2 cut(s) 422, 605
PctI GAATGC 1 cut(s) 676
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 4 cut(s) 169, 350, 930, 1430
PkrI GCNGC 8 cut(s) 97, 202, 304, 406, 994, 1036, 1254, 1270
PleI GAGTC 2 cut(s) 754, 1432
PpsI GAGTC 2 cut(s) 754, 1432
Psp124BI GAGCTC 1 cut(s) 909
Psp6I CCWGG 4 cut(s) 228, 273, 611, 1009
PspGI CCWGG 4 cut(s) 228, 273, 611, 1009
PspN4I GGNNCC 4 cut(s) 10, 215, 453, 1321
PspPI GGNCC 1 cut(s) 106
PsuI RGATCY 2 cut(s) 8, 451
PvuII CAGCTG 1 cut(s) 1037
RsaI GTAC 2 cut(s) 1122, 1321
RsaNI GTAC 2 cut(s) 1121, 1320
RseI CAYNNNNRTG 1 cut(s) 522
SacI GAGCTC 1 cut(s) 909
SaqAI TTAA 4 cut(s) 330, 747, 792, 1062
SatI GCNGC 8 cut(s) 96, 201, 303, 405, 993, 1035, 1253, 1269
Sau3AI GATC 6 cut(s) 8, 451, 553, 557, 735, 1176
Sau96I GGNCC 1 cut(s) 106
SchI GAGTC 2 cut(s) 754, 1433
ScrFI CCNGG 7 cut(s) 230, 251, 252, 275, 613, 1011, 1030
SduI GDGCHC 3 cut(s) 216, 237, 909
SfaNI GCATC 2 cut(s) 175, 538
SfcI CTRYAG 3 cut(s) 117, 917, 1212
SmaI CCCGGG 1 cut(s) 252
SmiMI CAYNNNNRTG 1 cut(s) 522
Sse9I AATT 9 cut(s) 174, 335, 426, 471, 589, 744, 894, 1065, 1302
SsiI CCGC 6 cut(s) 98, 551, 868, 910, 1014, 1252
SspMI CTAG 3 cut(s) 354, 461, 1196
SstI GAGCTC 1 cut(s) 909
StyD4I CCNGG 7 cut(s) 228, 249, 250, 273, 611, 1009, 1028
StyI CCWWGG 1 cut(s) 900
TaaI ACNGT 6 cut(s) 268, 823, 958, 982, 1216, 1445
TaqI TCGA 4 cut(s) 546, 556, 1179, 1385
TaqII GACCGA 1 cut(s) 940
TasI AATT 9 cut(s) 174, 335, 426, 471, 589, 744, 894, 1065, 1302
TauI GCSGC 1 cut(s) 1255
TfiI GAWTC 4 cut(s) 169, 350, 930, 1430
Tru1I TTAA 4 cut(s) 330, 747, 792, 1062
Tru9I TTAA 4 cut(s) 330, 747, 792, 1062
TscAI CASTG 3 cut(s) 529, 895, 963
TseFI GTSAC 6 cut(s) 823, 886, 952, 1016, 1279, 1415
TseI GCWGC 7 cut(s) 95, 200, 302, 404, 992, 1034, 1268
Tsp45I GTSAC 6 cut(s) 823, 886, 952, 1016, 1279, 1415
TspDTI ATGAA 4 cut(s) 36, 79, 801, 1221
TspGWI ACGGA 3 cut(s) 161, 1169, 1192
TspMI CCCGGG 1 cut(s) 250
TspRI CASTG 3 cut(s) 529, 895, 963
XapI RAATTY 1 cut(s) 1065
XceI RCATGY 2 cut(s) 422, 605
XcmI CCANNNNNNNNNTGG 1 cut(s) 887
XmaI CCCGGG 1 cut(s) 250
XmnI GAANNNNTTC 1 cut(s) 717
XspI CTAG 3 cut(s) 354, 461, 1196
Zsp2I ATGCAT 2 cut(s) 190, 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.