FvH4_6g14690

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0008293
Physical Location & Seq
Forward (+)
9042586 .. 9045972
3387 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g14690.t1

Sequence Viewer

Length: 1884 bp
ATGCTGAATGTCCGTTTGTCATCCGGACATGCAGGTGATTGGGACCTGGAGAAGGGGCTGCTGGAGCCATCAACGCCGGGAGCTCGATCGGAGCCGCCGATGTCACCCCACGCATCGAGGGCGCTGCTTCTGTCAAATTCCAGCAAGTCTCTATTGGTTTCGAATTCCAGCAAGTCTCTAATGGTTTCAAATTCTAGCAAGTCTCTTATGGTTTCGAATTCCGGCAAGTCTTTGGGCATCTCCAATTCCGGTAAGTCTTTGGGCATGTCAAATTCCGTCAAGCGGATGGATCAGGCGGGGAAGAAGAAGTACGTGCGGCAAGTCACCGGCCGCTTCAACGACACCGAGCTCCACCTGGAGGCGAAGCGGGGTGACGTGGCCGCCGTGCAGCATATCATCGGCGAAATTGATGCGCAGATGATGGGGACGCTGAGTGGGGCTGAGTTTGATGCGGAGGTGGCTGAGATTAGGTCGGCGGTTGTTAATGAGGTCAATGAGTTGGGAGAGACGCCGCTTTTCGCCGCCGCCGAGAAGGGGCACCTTGGTGTGGTAAAGGAGCTCTTGCCTTTTACCACCACGGAGGGGATTTACATGAAGAACAGGATCGGCTATGATCCATTGCATATTGCTGCTAGTCAAGGCCACCAAGCAATTGTACAGGTTCTGTTAGACCATGAACCAGGACTTAGCAAAACACTAGGCCCATCGAATGCAACAGCTCTTGTGTCCGCAGCTACAAGAGGGCATATAGAAGTGATTAAGGTGTTATTGTCTCATGATCCTAGCTTGCTAGAAATTTCTAAATCCAATGGGAAGAATGCATTGCATTTTGCGGCACGGCAGGGACATGTTGATATTGTGAATGCTTTGCTTGACAAGGATCCACAACTAGTAAACAGAGTTGACAAGAAAGGACAGACTGCTTTGCATATGGCCGTAAAAGGTCATAGCTGGGAGGTGGTGAAGTTGCTCCTTAAAGCAGATTCAGCTCTTGTCATGCACCCAGACAAGTATGGCAATTTAGCATTACATGTGGCCACAAGGAAGAAGCGAACAGAGATAGTGAATGAGCTGTTAGCCCATCCCCGCACAGATGTGAATGCTCTAACAAGAGAACAAAAAACTTCCCTTGATATAGCTGAAGCACTTCCTTTCTCTGAAGAATCCACAGCGATTAAGGAAAGCTTAACTCAGGCTGGTGGTCTCCGAGCCCAAGAACTTAACCAGCCAAGGGATGAGCTTAGAAACACTGTGTCAGCTATAAAAAAGGATGTCCGCACTCAGCTTGAACAAGCCCGCAAAACCAGTAAGAGTGTTAATGGAATTGCCAATGAGCTCCGTAAGCTACAAAGGGAAGGAATCAACATTGCAACTAACTCGGTCACAGTGGTTGCGTCACTCATCGCAACATTAGCATTTGCAGCCATATTTACTGTCCCCGGTGGTGATTTAGATAGTGGGTTGGCTGTGACGGTTGGAACTGCACCGTTCAAGATGTTTTATTTCTTCAATGCCATTTCACTCTTCGTAGCATTGTCTGTTGTCGTGGTACAGATCACCCTTGTTCGGGGTGAGACGAAGACTGAGAGGAGGGTTATTCAAGTGATTAACAAGGCAATGTGGTTGGCCTCTATGACCACTACAATAGCATTTATATCTGCATCATATATAGTGGTTGGTCGACATAATCGGTGGGCTGCAGTCCTCGTCACAGTTATAGGAGGGTGTATAATTTCAGCCGTTCTTGGTGTCATGACATATCTTGTGATGAAGTCCAAAAAAATTCGTAAAGTGAGAAAGAGAGAGAAGCTTCTTACAAGGACTGGATCCTCCTTGTACACAGAGGACTCTGGCTCAGAAGTGAATCGTGTTTACGCCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

628

Amino Acids

67.79

Weight (kDa)

9.61

Isoelectric Point (pI)

31.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 117 - 226 2.4e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 236 - 294 5.6e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 242 - 291 2.9e-08 Ankyrin repeats (many copies)
Ank_4 PF13637 282 - 325 1.3e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 290 - 328 2.3e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 299 - 368 3.3e-11 Ankyrin repeats (3 copies)
PGG PF13962 454 - 558 4.7e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 23
Acc16I TGCGCA 1 cut(s) 414
Acc36I ACCTGC 1 cut(s) 23
AccB1I GGYRCC 1 cut(s) 537
AccI GTMKAC 1 cut(s) 1681
AccIII TCCGGA 1 cut(s) 23
AclWI GGATC 8 cut(s) 297, 608, 611, 773, 875, 888, 1821, 1834
AcoI YGGCCR 4 cut(s) 328, 378, 933, 1035
AcsI RAATTY 7 cut(s) 136, 163, 190, 217, 271, 795, 1782
AcuI CTGAAG 2 cut(s) 1161, 1179
AcyI GRCGYC 1 cut(s) 509
AfaI GTAC 4 cut(s) 311, 657, 1551, 1838
AfiI CCNNNNNNNGG 9 cut(s) 52, 282, 358, 534, 547, 582, 1231, 1566, 1567
AflIII ACRYGT 2 cut(s) 847, 1030
AgsI TTSAA 6 cut(s) 189, 337, 1289, 1492, 1510, 1601
AhlI ACTAGT 1 cut(s) 889
AjiI CACGTC 1 cut(s) 376
AjnI CCWGG 3 cut(s) 45, 354, 679
AleI CACNNNNGTG 2 cut(s) 543, 1094
Alw21I GWGCWC 4 cut(s) 85, 351, 561, 1338
Alw26I GTCTC 7 cut(s) 153, 180, 207, 500, 777, 1208, 1568
AlwI GGATC 8 cut(s) 297, 608, 611, 773, 875, 888, 1821, 1834
AlwNI CAGNNNCTG 1 cut(s) 664
Aor13HI TCCGGA 1 cut(s) 23
AoxI GGCC 7 cut(s) 328, 378, 640, 700, 933, 1035, 1626
ApeKI GCWGC 7 cut(s) 58, 124, 388, 629, 731, 1421, 1697
ApoI RAATTY 7 cut(s) 136, 163, 190, 217, 271, 795, 1782
Asp700I GAANNNNTTC 1 cut(s) 1146
AspLEI GCGC 2 cut(s) 124, 415
AspS9I GGNCC 2 cut(s) 43, 701
AsuC2I CCSGG 2 cut(s) 78, 1440
AsuHPI GGTGA 8 cut(s) 47, 96, 316, 383, 973, 1457, 1549, 1583
AsuII TTCGAA 2 cut(s) 161, 215
AvaII GGWCC 1 cut(s) 43
BaeGI GKGCMC 1 cut(s) 540
BalI TGGCCA 1 cut(s) 1037
BamHI GGATCC 2 cut(s) 880, 1826
BanI GGYRCC 1 cut(s) 537
BanII GRGCYC 5 cut(s) 85, 351, 561, 1213, 1338
BarI GAAGNNNNNNTAC 2 cut(s) 293, 325
BbsI GAAGAC 1 cut(s) 1586
Bbv12I GWGCWC 4 cut(s) 85, 351, 561, 1338
BbvI GCAGC 7 cut(s) 45, 111, 400, 616, 743, 1433, 1684
BccI CCATC 5 cut(s) 76, 280, 415, 712, 1089
BceAI ACGGC 4 cut(s) 368, 854, 920, 1724
BcgI CGANNNNNNTGC 6 cut(s) 106, 140, 392, 426, 1359, 1393
BciT130I CCWGG 3 cut(s) 47, 356, 681
BcnI CCSGG 2 cut(s) 78, 1440
BcoDI GTCTC 7 cut(s) 153, 180, 207, 500, 777, 1208, 1568
BcuI ACTAGT 1 cut(s) 889
BfaI CTAG 6 cut(s) 195, 633, 698, 783, 791, 890
BfmI CTRYAG 1 cut(s) 1698
BfoI RGCGCY 1 cut(s) 125
BfuAI ACCTGC 1 cut(s) 23
Bme1390I CCNGG 5 cut(s) 47, 78, 356, 681, 1440
Bme18I GGWCC 1 cut(s) 43
BmgBI CACGTC 1 cut(s) 376
BmgT120I GGNCC 2 cut(s) 43, 701
BmiI GGNNCC 6 cut(s) 44, 66, 93, 539, 882, 1828
BmrFI CCNGG 5 cut(s) 47, 78, 356, 681, 1440
BmsI GCATC 5 cut(s) 122, 246, 400, 439, 1670
BpiI GAAGAC 1 cut(s) 1586
BpmI CTGGAG 3 cut(s) 68, 83, 377
Bpu14I TTCGAA 2 cut(s) 161, 215
BpuMI CCSGG 2 cut(s) 78, 1440
BsaAI YACGTR 1 cut(s) 313
BsaHI GRCGYC 1 cut(s) 509
BsaI GGTCTC 1 cut(s) 1208
BsaJI CCNNGG 4 cut(s) 541, 576, 1229, 1438
BsaWI WCCGGW 2 cut(s) 23, 248
Bsc4I CCNNNNNNNGG 9 cut(s) 52, 282, 358, 534, 547, 582, 1231, 1566, 1567
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 2 cut(s) 1305, 1828
Bse3DI GCAATG 4 cut(s) 617, 821, 1365, 1623
BseAI TCCGGA 1 cut(s) 23
BseBI CCWGG 3 cut(s) 47, 356, 681
BseDI CCNNGG 4 cut(s) 541, 576, 1229, 1438
BseGI GGATG 5 cut(s) 20, 291, 1081, 1240, 1276
BseLI CCNNNNNNNGG 9 cut(s) 52, 282, 358, 534, 547, 582, 1231, 1566, 1567
BseMI GCAATG 4 cut(s) 617, 821, 1365, 1623
BseMII CTCAG 7 cut(s) 422, 432, 453, 1205, 1295, 1575, 1869
BseNI ACTGG 2 cut(s) 1305, 1828
BseRI GAGGAG 1 cut(s) 1603
BseSI GKGCMC 1 cut(s) 540
BseX3I CGGCCG 1 cut(s) 328
BseXI GCAGC 7 cut(s) 45, 111, 400, 616, 743, 1433, 1684
BseYI CCCAGC 1 cut(s) 951
BsgI GTGCAG 2 cut(s) 407, 1467
Bsh1285I CGRYCG 2 cut(s) 89, 331
BshFI GGCC 7 cut(s) 330, 380, 642, 702, 935, 1037, 1628
BshNI GGYRCC 1 cut(s) 537
BsiEI CGRYCG 2 cut(s) 89, 331
BsiHKAI GWGCWC 4 cut(s) 85, 351, 561, 1338
BsiSI CCGG 6 cut(s) 24, 77, 222, 249, 327, 1440
BslFI GGGAC 4 cut(s) 56, 439, 858, 1421
BslI CCNNNNNNNGG 9 cut(s) 52, 282, 358, 534, 547, 582, 1231, 1566, 1567
BsmAI GTCTC 7 cut(s) 153, 180, 207, 500, 777, 1208, 1568
BsmBI CGTCTC 2 cut(s) 500, 1568
BsmFI GGGAC 4 cut(s) 56, 439, 858, 1421
BsmI GAATGC 4 cut(s) 715, 823, 868, 1105
BsnI GGCC 7 cut(s) 330, 380, 642, 702, 935, 1037, 1628
Bso31I GGTCTC 1 cut(s) 1208
Bsp119I TTCGAA 2 cut(s) 161, 215
Bsp1286I GDGCHC 6 cut(s) 85, 351, 540, 561, 1213, 1338
Bsp13I TCCGGA 1 cut(s) 23
Bsp1407I TGTACA 2 cut(s) 655, 1836
Bsp143I GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
BspANI GGCC 7 cut(s) 330, 380, 642, 702, 935, 1037, 1628
BspCNI CTCAG 7 cut(s) 423, 433, 454, 1204, 1294, 1576, 1868
BspEI TCCGGA 1 cut(s) 23
BspHI TCATGA 2 cut(s) 775, 1752
BspLI GGNNCC 6 cut(s) 44, 66, 93, 539, 882, 1828
BspMAI CTGCAG 1 cut(s) 1702
BspMI ACCTGC 1 cut(s) 23
BspPI GGATC 8 cut(s) 297, 608, 611, 773, 875, 888, 1821, 1834
BspT104I TTCGAA 2 cut(s) 161, 215
BspT107I GGYRCC 1 cut(s) 537
BspTNI GGTCTC 1 cut(s) 1208
BsrDI GCAATG 4 cut(s) 617, 821, 1365, 1623
BsrFI RCCGGY 1 cut(s) 326
BsrGI TGTACA 2 cut(s) 655, 1836
BsrI ACTGG 2 cut(s) 1305, 1828
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 4 cut(s) 541, 576, 1229, 1438
BssMI GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
BssNI GRCGYC 1 cut(s) 509
BssT1I CCWWGG 2 cut(s) 541, 1229
Bst2UI CCWGG 3 cut(s) 47, 356, 681
Bst4CI ACNGT 6 cut(s) 1252, 1387, 1435, 1474, 1488, 1714
Bst6I CTCTTC 1 cut(s) 1529
BstACI GRCGYC 1 cut(s) 509
BstAUI TGTACA 2 cut(s) 655, 1836
BstBAI YACGTR 1 cut(s) 313
BstBI TTCGAA 2 cut(s) 161, 215
BstC8I GCNNGC 2 cut(s) 788, 1297
BstDEI CTNAG 9 cut(s) 431, 441, 462, 686, 1191, 1241, 1281, 1584, 1855
BstDSI CCRYGG 1 cut(s) 576
BstENI CCTNNNNNAGG 1 cut(s) 50
BstF5I GGATG 5 cut(s) 20, 291, 1081, 1240, 1276
BstH2I RGCGCY 1 cut(s) 125
BstHHI GCGC 2 cut(s) 124, 415
BstKTI GATC 8 cut(s) 89, 292, 606, 616, 781, 883, 1557, 1829
BstMAI GTCTC 7 cut(s) 153, 180, 207, 500, 777, 1208, 1568
BstMBI GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
BstMCI CGRYCG 2 cut(s) 89, 331
BstMWI GCNNNNNNNGC 8 cut(s) 64, 73, 119, 458, 986, 1342, 1412, 1421
BstNI CCWGG 3 cut(s) 47, 356, 681
BstNSI RCATGY 4 cut(s) 32, 268, 851, 1034
BstSCI CCNGG 5 cut(s) 45, 76, 354, 679, 1438
BstSFI CTRYAG 1 cut(s) 1698
BstSLI GKGCMC 1 cut(s) 540
BstV1I GCAGC 7 cut(s) 45, 111, 400, 616, 743, 1433, 1684
BstV2I GAAGAC 1 cut(s) 1586
BstX2I RGATCY 2 cut(s) 880, 1826
BstYI RGATCY 2 cut(s) 880, 1826
BstZI CGGCCG 1 cut(s) 328
BsuRI GGCC 7 cut(s) 330, 380, 642, 702, 935, 1037, 1628
BtgI CCRYGG 1 cut(s) 576
BtgZI GCGATG 1 cut(s) 1387
BtrI CACGTC 1 cut(s) 376
BtsCI GGATG 5 cut(s) 20, 291, 1081, 1240, 1276
BtsIMutI CAGTG 2 cut(s) 1248, 1392
BveI ACCTGC 1 cut(s) 23
Cac8I GCNNGC 2 cut(s) 788, 1297
CaiI CAGNNNCTG 1 cut(s) 664
CciI TCATGA 2 cut(s) 775, 1752
CfoI GCGC 2 cut(s) 124, 415
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 2 cut(s) 43, 701
CseI GACGC 3 cut(s) 436, 517, 1383
Csp6I GTAC 4 cut(s) 310, 656, 1550, 1837
CviAII CATG 9 cut(s) 29, 265, 592, 674, 776, 848, 997, 1031, 1753
CviQI GTAC 4 cut(s) 310, 656, 1550, 1837
DdeI CTNAG 9 cut(s) 431, 441, 462, 686, 1191, 1241, 1281, 1584, 1855
DpnI GATC 8 cut(s) 88, 291, 605, 615, 780, 882, 1556, 1828
DpnII GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
EaeI YGGCCR 4 cut(s) 328, 378, 933, 1035
EagI CGGCCG 1 cut(s) 328
Eam1104I CTCTTC 1 cut(s) 1529
EarI CTCTTC 1 cut(s) 1529
Ecl136II GAGCTC 4 cut(s) 83, 349, 559, 1336
EclXI CGGCCG 1 cut(s) 328
Eco130I CCWWGG 2 cut(s) 541, 1229
Eco24I GRGCYC 5 cut(s) 85, 351, 561, 1213, 1338
Eco31I GGTCTC 1 cut(s) 1208
Eco47I GGWCC 1 cut(s) 43
Eco52I CGGCCG 1 cut(s) 328
Eco53kI GAGCTC 4 cut(s) 83, 349, 559, 1336
Eco57I CTGAAG 2 cut(s) 1161, 1179
EcoICRI GAGCTC 4 cut(s) 83, 349, 559, 1336
EcoNI CCTNNNNNAGG 1 cut(s) 50
EcoO109I RGGNCCY 1 cut(s) 43
EcoRI GAATTC 2 cut(s) 163, 217
EcoRII CCWGG 3 cut(s) 45, 354, 679
EcoT14I CCWWGG 2 cut(s) 541, 1229
EcoT22I ATGCAT 1 cut(s) 823
EcoT38I GRGCYC 5 cut(s) 85, 351, 561, 1213, 1338
ErhI CCWWGG 2 cut(s) 541, 1229
Esp3I CGTCTC 2 cut(s) 500, 1568
FaeI CATG 9 cut(s) 32, 268, 595, 677, 779, 851, 1000, 1034, 1756
FalI AAGNNNNNCTT 4 cut(s) 545, 577, 1169, 1201
FaqI GGGAC 4 cut(s) 56, 439, 858, 1421
FatI CATG 9 cut(s) 28, 264, 591, 673, 775, 847, 996, 1030, 1752
FauI CCCGC 4 cut(s) 289, 360, 1094, 1304
FauNDI CATATG 1 cut(s) 930
FblI GTMKAC 1 cut(s) 1681
FokI GGATG 5 cut(s) 7, 298, 1068, 1247, 1283
FriOI GRGCYC 5 cut(s) 85, 351, 561, 1213, 1338
FspBI CTAG 6 cut(s) 195, 633, 698, 783, 791, 890
FspI TGCGCA 1 cut(s) 414
GlaI GCGC 2 cut(s) 123, 414
GsaI CCCAGC 1 cut(s) 955
GsuI CTGGAG 3 cut(s) 68, 83, 377
HaeII RGCGCY 1 cut(s) 125
HaeIII GGCC 7 cut(s) 330, 380, 642, 702, 935, 1037, 1628
HapII CCGG 6 cut(s) 24, 77, 222, 249, 327, 1440
HgaI GACGC 3 cut(s) 436, 517, 1383
HhaI GCGC 2 cut(s) 124, 415
Hin1I GRCGYC 1 cut(s) 509
Hin1II CATG 9 cut(s) 32, 268, 595, 677, 779, 851, 1000, 1034, 1756
Hin6I GCGC 2 cut(s) 122, 413
HinP1I GCGC 2 cut(s) 122, 413
HincII GTYRAC 2 cut(s) 904, 1682
HindII GTYRAC 2 cut(s) 904, 1682
HindIII AAGCTT 2 cut(s) 1183, 1808
HinfI GANTC 5 cut(s) 983, 1163, 1359, 1847, 1864
HpaII CCGG 6 cut(s) 24, 77, 222, 249, 327, 1440
HphI GGTGA 8 cut(s) 47, 96, 316, 383, 973, 1457, 1549, 1583
Hpy166II GTNNAC 5 cut(s) 895, 904, 1682, 1839, 1873
Hpy188I TCNGA 4 cut(s) 91, 1159, 1208, 1858
Hpy188III TCNNGA 4 cut(s) 24, 776, 1492, 1753
Hpy8I GTNNAC 5 cut(s) 895, 904, 1682, 1839, 1873
HpyAV CCTTC 3 cut(s) 46, 526, 1349
HpyCH4III ACNGT 6 cut(s) 1252, 1387, 1435, 1474, 1488, 1714
HpyCH4IV ACGT 2 cut(s) 312, 375
HpyF10VI GCNNNNNNNGC 8 cut(s) 64, 73, 119, 458, 986, 1342, 1412, 1421
HpyF3I CTNAG 9 cut(s) 431, 441, 462, 686, 1191, 1241, 1281, 1584, 1855
HpySE526I ACGT 2 cut(s) 312, 375
Hsp92I GRCGYC 1 cut(s) 509
Hsp92II CATG 9 cut(s) 32, 268, 595, 677, 779, 851, 1000, 1034, 1756
HspAI GCGC 2 cut(s) 122, 413
Kpn2I TCCGGA 1 cut(s) 23
Kzo9I GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
LmnI GCTCC 7 cut(s) 64, 80, 91, 354, 556, 975, 1341
Lsp1109I GCAGC 7 cut(s) 45, 111, 400, 616, 743, 1433, 1684
LweI GCATC 5 cut(s) 122, 246, 400, 439, 1670
MaeI CTAG 6 cut(s) 195, 633, 698, 783, 791, 890
MaeII ACGT 2 cut(s) 312, 375
MaeIII GTNAC 7 cut(s) 102, 322, 371, 1381, 1395, 1468, 1708
MalI GATC 8 cut(s) 88, 291, 605, 615, 780, 882, 1556, 1828
MboI GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
MboII GAAGA 9 cut(s) 313, 316, 607, 826, 1057, 1172, 1498, 1516, 1591
MfeI CAATTG 1 cut(s) 651
MflI RGATCY 2 cut(s) 880, 1826
MhlI GDGCHC 6 cut(s) 85, 351, 540, 561, 1213, 1338
MlsI TGGCCA 1 cut(s) 1037
MluNI TGGCCA 1 cut(s) 1037
MlyI GAGTC 1 cut(s) 1841
MmeI TCCRAC 1 cut(s) 1456
Mox20I TGGCCA 1 cut(s) 1037
Mph1103I ATGCAT 1 cut(s) 823
MroI TCCGGA 1 cut(s) 23
MroXI GAANNNNTTC 1 cut(s) 1146
MscI TGGCCA 1 cut(s) 1037
MseI TTAA 9 cut(s) 483, 759, 975, 1176, 1187, 1221, 1317, 1608, 1882
MslI CAYNNNNRTG 3 cut(s) 33, 543, 1094
Msp20I TGGCCA 1 cut(s) 1037
MspI CCGG 6 cut(s) 24, 77, 222, 249, 327, 1440
MspR9I CCNGG 5 cut(s) 47, 78, 356, 681, 1440
MunI CAATTG 1 cut(s) 651
Mva1269I GAATGC 4 cut(s) 715, 823, 868, 1105
MvaI CCWGG 3 cut(s) 47, 356, 681
MwoI GCNNNNNNNGC 8 cut(s) 64, 73, 119, 458, 986, 1342, 1412, 1421
NciI CCSGG 2 cut(s) 78, 1440
NdeI CATATG 1 cut(s) 930
NdeII GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
NlaIII CATG 9 cut(s) 32, 268, 595, 677, 779, 851, 1000, 1034, 1756
NlaIV GGNNCC 6 cut(s) 44, 66, 93, 539, 882, 1828
NmeAIII GCCGAG 1 cut(s) 553
NmuCI GTSAC 7 cut(s) 102, 322, 371, 1381, 1395, 1468, 1708
NsbI TGCGCA 1 cut(s) 414
NsiI ATGCAT 1 cut(s) 823
NspI RCATGY 4 cut(s) 32, 268, 851, 1034
NspV TTCGAA 2 cut(s) 161, 215
OliI CACNNNNGTG 2 cut(s) 543, 1094
PagI TCATGA 2 cut(s) 775, 1752
PaqCI CACCTGC 1 cut(s) 23
PciI ACATGT 2 cut(s) 847, 1030
PcsI WCGNNNNNNNCGW 3 cut(s) 95, 381, 525
PctI GAATGC 4 cut(s) 715, 823, 868, 1105
PdmI GAANNNNTTC 1 cut(s) 1146
PfeI GAWTC 4 cut(s) 983, 1163, 1359, 1864
Ple19I CGATCG 1 cut(s) 89
PleI GAGTC 1 cut(s) 1841
PpsI GAGTC 1 cut(s) 1841
Ppu21I YACGTR 1 cut(s) 313
PpuMI RGGWCCY 1 cut(s) 43
PscI ACATGT 2 cut(s) 847, 1030
Psp124BI GAGCTC 4 cut(s) 85, 351, 561, 1338
Psp5II RGGWCCY 1 cut(s) 43
Psp6I CCWGG 3 cut(s) 45, 354, 679
PspFI CCCAGC 1 cut(s) 951
PspGI CCWGG 3 cut(s) 45, 354, 679
PspN4I GGNNCC 6 cut(s) 44, 66, 93, 539, 882, 1828
PspPI GGNCC 2 cut(s) 43, 701
PspPPI RGGWCCY 1 cut(s) 43
PstI CTGCAG 1 cut(s) 1702
PstNI CAGNNNCTG 1 cut(s) 664
PsuI RGATCY 2 cut(s) 880, 1826
PvuI CGATCG 1 cut(s) 89
RsaI GTAC 4 cut(s) 311, 657, 1551, 1838
RsaNI GTAC 4 cut(s) 310, 656, 1550, 1837
RseI CAYNNNNRTG 3 cut(s) 33, 543, 1094
SacI GAGCTC 4 cut(s) 85, 351, 561, 1338
SalI GTCGAC 1 cut(s) 1680
SaqAI TTAA 9 cut(s) 483, 759, 975, 1176, 1187, 1221, 1317, 1608, 1882
Sau3AI GATC 8 cut(s) 86, 289, 603, 613, 778, 880, 1554, 1826
Sau96I GGNCC 2 cut(s) 43, 701
SchI GAGTC 1 cut(s) 1841
ScrFI CCNGG 5 cut(s) 47, 78, 356, 681, 1440
SduI GDGCHC 6 cut(s) 85, 351, 540, 561, 1213, 1338
SfaNI GCATC 5 cut(s) 122, 246, 400, 439, 1670
SfcI CTRYAG 1 cut(s) 1698
SfuI TTCGAA 2 cut(s) 161, 215
SinI GGWCC 1 cut(s) 43
SmiMI CAYNNNNRTG 3 cut(s) 33, 543, 1094
SpeI ACTAGT 1 cut(s) 889
SspMI CTAG 6 cut(s) 195, 633, 698, 783, 791, 890
SstI GAGCTC 4 cut(s) 85, 351, 561, 1338
StyD4I CCNGG 5 cut(s) 45, 76, 354, 679, 1438
StyI CCWWGG 2 cut(s) 541, 1229
TaaI ACNGT 6 cut(s) 1252, 1387, 1435, 1474, 1488, 1714
TaiI ACGT 2 cut(s) 315, 378
TaqI TCGA 6 cut(s) 85, 116, 161, 215, 707, 1681
TaqII GACCGA 1 cut(s) 1369
TatI WGTACW 2 cut(s) 655, 1836
TauI GCSGC 8 cut(s) 97, 319, 333, 383, 514, 524, 527, 836
TfiI GAWTC 4 cut(s) 983, 1163, 1359, 1864
Tru1I TTAA 9 cut(s) 483, 759, 975, 1176, 1187, 1221, 1317, 1608, 1882
Tru9I TTAA 9 cut(s) 483, 759, 975, 1176, 1187, 1221, 1317, 1608, 1882
TscAI CASTG 2 cut(s) 1255, 1392
TseFI GTSAC 7 cut(s) 102, 322, 371, 1381, 1395, 1468, 1708
TseI GCWGC 7 cut(s) 58, 124, 388, 629, 731, 1421, 1697
Tsp45I GTSAC 7 cut(s) 102, 322, 371, 1381, 1395, 1468, 1708
TspDTI ATGAA 3 cut(s) 608, 690, 1784
TspGWI ACGGA 3 cut(s) 265, 593, 1328
TspRI CASTG 2 cut(s) 1255, 1392
VpaK11BI GGWCC 1 cut(s) 43
XagI CCTNNNNNAGG 1 cut(s) 50
XapI RAATTY 7 cut(s) 136, 163, 190, 217, 271, 795, 1782
XceI RCATGY 4 cut(s) 32, 268, 851, 1034
XmiI GTMKAC 1 cut(s) 1681
XmnI GAANNNNTTC 1 cut(s) 1146
XspI CTAG 6 cut(s) 195, 633, 698, 783, 791, 890
Zsp2I ATGCAT 1 cut(s) 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.