Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008420

Physical Location & Seq

Genomic Coordinates Reverse (-)

2934592 .. 2939511

Gene Structure 4920 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G09560.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2715 bp

ATGAGTTTGGTTGGAAGAGTTGGGAGTTTGATTTCTCAAGGGGTTTACTCTGTAGCGACACCATTTCATCCCTTTGGTGGTGCTATTGATGTCATCGTTGTTCAACAACAAGATGGTTCTTTCCGTAGCACGCCTTGGTATGTTAGGTTTGGTAAGTTCCAAGGTGTTCTCAAAGGCGCTGAGAAGTTTGTCAGGATTTCTGTTAATGGAACCGAAGCTGATTTTCACATGTATCTTGATAATTCTGGTGAAGCATATTTCATCAGGGAAGTTGATCCTGCAGCTAATGACACCAACAATTTGATTTCCGGGTCTGAGAATAACAATGGTAATCAGAATAACGGTGTTACTTATCGACTTGAGCACAGTTTATCGGACTCTGGTACTGGAGAATTACGAGAGGGTTTCGACCCTTTGAGTCGGCTTGAGAGGACAGAGTCTGATTGTAATAGGAGGTTTTATGATTTTCAGGATGATCCTCCTTCGCCAACCTCAGAATATGGAAGTGCTCGATTTGACAATCTAAATGTGGAAAGTTATGGGGATTCTCAAGGCTCAGATTCTGAAGTGGTTTTGGTCAGTATTGATGGACATATACTAACAGCCCCTGTGTCAGTTGCTGAGCAGGAGGCTGAGAATTTACGGTTAAATACTCCTCAGTTTCATTTGGCCCCTGGTGATGGGACTGAGTTTTGTGAAGGTAATACTGAGTTTGCTTCATCAGAGACTCCGTGGGATACTGAATATATCGACAAAGTGGAGGAGTCATCTGATACTGCTAATATTGCATCTGATAAAGTAGATGCCATTAATGATGAGCGTAATGATTTGGATTCCCATTCTCGTGATAATGCCGAAAAAGATTCTCATGATGCTGAAAGAGATCTTCTTGGGAGCTGTCTGGAGCAGTCAGAGCTGACCAAAACTAGTGAGAATGTGAAGTCTGAGGAACCAGGTCCTACTTTTGAGGATCGGAATCTAAAAGAAGGTGAGTTTCCACTTCGCACCATTATGGAAAATGATAGAAGTGAAGATGAAGTTACTATTGAATCAATAGATACTCTTGTTGATAGTTTTGAATCTTCTACAACCCAAATAACAATAGAAGAAGTGAAAACAACCGAAGGATCCAGAATATCCGTTGATTCTAATGCTGATTCAGAATGTAAGGATGAACAAACATCTGCAGAAACTGCCATCTTGTTTAACAACCAGGAATCCAGTATATCCGTTGATTCTAATGCTGATTCAGAATGTAAGGATGAACAGCCACGAATATCTGCAGAAACTGCCATCTTGATTAACAACCAGGAAGGTGGGATTATAGAATCGGAAGACCAGGATTCTGAGAGAGTCTCTATAGATTCAACGAGGGAGGAAGTTGATAAGGATAACGAGGACAGGAAGACTGTAGTTTCAGTGGGTGTGACTTCTAGTGTCGACGAAGGAGAACCCGATACAGATCAGAGATATGAGTTATCACTTTGCAAGGATGAGCTTCGTCAGGGTATGGGACTTAGCGCAGCTGCTGAAGTCTTTGATGCACATATGATCTCCAAGGAAGAATATATAAATTCGGCCACATCAATTCTTGAAAGTGAAAATCTGGTTGTTAGGATTAGAGAAACGTATATGCCATGGACGAAAGCTGCTCGAATTGTGCTTGGGAAAGCTGTGTTTGATCTAGACTTAGATATCCAGCCAGATGATGTGATTTCTGTGGAGGAAAATGAATCGCCTAAGCCCAAGGATGATGAAACTACAATAACTCCTTCTTCATCTGGAACAAGATGGAGACTCTGGCCGATTCCTTTTAGAAGGGTTAAAACTGTTGAGCATACGGGAAGTAACTCCTCAAGCGAAGAAGATCTGTTTGTTGATTCCGAACCTGGCTTACAGAACTCACCGGAAACACAATCAACCACAGAGAGTCGCCATGAGTCTCCGCGTAGACAACTTGTGAGAACTAATGTCCCTACCAATGAACAGATCGCATCTCTGAATCTGAAAGATGGTCAGAATATGATAACATTTAGTTTCTCAACAAGAGTTCTTGGAACACAACAGGTCGATGCTCACATTTACCGGTGGAGATGGGACACCAAGATAGTGATTTCAGATGTTGATGGAACTATAACTAAATCTGATGTGTTAGGTCAGTTCATGCCCTTCATTGGAAAGGACTGGACCCAATCCGGTGTAGCCAAGCTTTTTTCTGCCATAAAGGAGAATGGATATCAGTTACTGTTTTTGAGCGCTCGTGCCATCGTTCAGGCATATCTAACAAGAAATTTCTTAAATAATCTGAAGCAGGACGGAAAAGCTCTGCCAACCGGTCCTGTGGTCATTTCACCAGATGGCCTATTTCCAGCATTGTACCGTGAAGTGATAAGAAGAGCACCTCATGAGTTCAAGATCGCATGTTTGGAGGATATCAGGAAACTCTTCCCAACGGATTACAACCCGTTCTATGCCGGATTTGGAAATAGAGACACAGATGAGCTGAGTTACAGAAAACTCGGAATCCCAAAGGGAAAGATATTCATAATCAACCCAAAGGGAGAAGTGGCAACAGGACATCGCATAGATGTCAAGAAATCTTACACTTCACTTCATACTCTTGTCAACGACATGTTTCCTCCAACTTCACTTGTTGAGCAGGAAGATTATAACCCATGGAATTTCTGGAAACTGCCAATAGAAGAGGTTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000322 GO:0000325 GO:0000326 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0006810 GO:0006886 GO:0006950 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009267 GO:0009605 GO:0009705 GO:0009987 GO:0009991 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016036 GO:0019374 GO:0019375 GO:0019637 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032586 GO:0033036 GO:0033554 GO:0034613 GO:0042594 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046467 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0070727 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0090407 GO:0098588 GO:0098791 GO:0098805 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

904

Amino Acids

101.0

Weight (kDa)

4.48

Isoelectric Point (pI)

45.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipin_N	PF04571	1 - 102	3.6e-31	lipin, N-terminal conserved region
Lipin_mid	PF16876	492 - 583	1.1e-12	Lipin/Ned1/Smp2 multi-domain protein middle domain
LNS2	PF08235	657 - 880	1.4e-98	LNS2 (Lipin/Ned1/Smp2)
LNS2_PITM1-3	PF24694	704 - 850	7.4e-07	PITM 1-3, LNS2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09560 AT3G09560 AT3G09560 AT3G09560 AT5G42870
fragaria_vesca	FvH4_6g14720
malus_domestica	MD04G1116800.v1.1 MD12G1132500.v1.1
prunus_persica	Prupe.6G246600_v2.0.a1 Prupe.6G246600_v2.0.a1
pyrus_communis	pycom04g10670 pycom12g12830
rosa_chinensis	RchiOBHm_Chr3g0467941
rosa_laevigata	RLG00000024465
rosa_multiflora	Rmu_sc0001793.1_g000056 Rmu_sc0006017.1_g000005
rosa_roxburghii	Rroxscaffold_6G00413270
rosa_rugosa	Rorug03G0090600
rosa_samantha	Rh3AG139100 Rh3BG160700 Rh3CG160600 Rh3DG161200
rosa_wichuraiana	Rw3G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2670
AccI	GTMKAC	2 cut(s)	1440, 1951
AccII	CGCG	1 cut(s)	1948
AciI	CCGC	1 cut(s)	1946
AclWI	GGATC	5 cut(s)	269, 470, 978, 1122, 1135
AcoI	YGGCCR	2 cut(s)	1578, 1802
AcsI	RAATTY	4 cut(s)	637, 1573, 2290, 2680
AcuI	CTGAAG	3 cut(s)	585, 1551, 2327
AfaI	GTAC	2 cut(s)	385, 2378
AfeI	AGCGCT	1 cut(s)	2257
AfiI	CCNNNNNNNGG	3 cut(s)	77, 680, 2174
AflIII	ACRYGT	2 cut(s)	228, 2631
AgeI	ACCGGT	2 cut(s)	2085, 2333
AgsI	TTSAA	7 cut(s)	104, 1049, 1079, 1368, 1595, 2413, 2711
AhlI	ACTAGT	1 cut(s)	926
AjnI	CCWGG	6 cut(s)	673, 952, 1212, 1308, 1338, 1888
Alw21I	GWGCWC	3 cut(s)	366, 511, 2401
Alw26I	GTCTC	5 cut(s)	719, 1360, 1789, 1947, 2484
AlwI	GGATC	5 cut(s)	269, 470, 978, 1122, 1135
AlwNI	CAGNNNCTG	8 cut(s)	440, 563, 608, 620, 1193, 1289, 1529, 2245
Aor51HI	AGCGCT	1 cut(s)	2257
AoxI	GGCC	4 cut(s)	669, 1578, 1802, 2359
ApeKI	GCWGC	4 cut(s)	281, 1523, 1526, 1649
ApoI	RAATTY	4 cut(s)	637, 1573, 2290, 2680
AseI	ATTAAT	1 cut(s)	810
AsiGI	ACCGGT	2 cut(s)	2085, 2333
Asp700I	GAANNNNTTC	1 cut(s)	2444
AspLEI	GCGC	3 cut(s)	179, 1523, 2258
AspS9I	GGNCC	4 cut(s)	670, 956, 2187, 2336
AsuC2I	CCSGG	1 cut(s)	310
AsuHPI	GGTGA	5 cut(s)	260, 689, 1001, 1896, 2343
AvaII	GGWCC	3 cut(s)	956, 2187, 2336
BaeI	ACNNNNGTAYC	2 cut(s)	1050, 1083
BamHI	GGATCC	1 cut(s)	1127
BauI	CACGAG	2 cut(s)	843, 2259
BbsI	GAAGAC	2 cut(s)	1341, 1412
Bbv12I	GWGCWC	3 cut(s)	366, 511, 2401
BbvI	GCAGC	4 cut(s)	293, 1513, 1535, 1636
BciT130I	CCWGG	6 cut(s)	675, 954, 1214, 1310, 1340, 1890
BciVI	GTATCC	1 cut(s)	730
BcnI	CCSGG	1 cut(s)	310
BcoDI	GTCTC	5 cut(s)	719, 1360, 1789, 1947, 2484
BcuI	ACTAGT	1 cut(s)	926
BfaI	CTAG	3 cut(s)	927, 1434, 1685
BfmI	CTRYAG	6 cut(s)	51, 279, 1185, 1281, 1359, 1410
BfoI	RGCGCY	2 cut(s)	180, 2259
BfuI	GTATCC	1 cut(s)	730
BglII	AGATCT	2 cut(s)	883, 1867
BisI	GCNGC	4 cut(s)	282, 1524, 1527, 1650
BlpI	GCTNAGC	1 cut(s)	621
BlsI	GCNGC	4 cut(s)	283, 1525, 1528, 1651
Bme1390I	CCNGG	7 cut(s)	310, 675, 954, 1214, 1310, 1340, 1890
Bme18I	GGWCC	3 cut(s)	956, 2187, 2336
BmgT120I	GGNCC	4 cut(s)	670, 956, 2187, 2336
BmiI	GGNNCC	5 cut(s)	211, 672, 951, 1129, 2189
BmrFI	CCNGG	7 cut(s)	310, 675, 954, 1214, 1310, 1340, 1890
BmsI	GCATC	6 cut(s)	793, 797, 862, 1531, 2003, 2062
BpiI	GAAGAC	2 cut(s)	1341, 1412
BplI	GAGNNNNNCTC	2 cut(s)	1340, 1372
BpmI	CTGGAG	2 cut(s)	408, 923
Bpu10I	CCTNAGC	1 cut(s)	1740
Bpu1102I	GCTNAGC	1 cut(s)	621
BpuEI	CTTGAG	5 cut(s)	21, 380, 446, 534, 1840
BpuMI	CCSGG	1 cut(s)	310
BsaBI	GATNNNNATC	2 cut(s)	975, 1461
BsaJI	CCNNGG	8 cut(s)	134, 160, 673, 731, 1557, 1637, 1746, 2675
BsaWI	WCCGGW	4 cut(s)	1906, 2085, 2195, 2333
BsaXI	ACNNNNNCTCC	2 cut(s)	1753, 1783
Bsc4I	CCNNNNNNNGG	3 cut(s)	77, 680, 2174
Bse118I	RCCGGY	2 cut(s)	2085, 2333
Bse1I	ACTGG	3 cut(s)	391, 1221, 2189
Bse8I	GATNNNNATC	2 cut(s)	975, 1461
BseBI	CCWGG	6 cut(s)	675, 954, 1214, 1310, 1340, 1890
BseDI	CCNNGG	8 cut(s)	134, 160, 673, 731, 1557, 1637, 1746, 2675
BseGI	GGATG	6 cut(s)	67, 478, 1177, 1267, 1498, 1756
BseJI	GATNNNNATC	2 cut(s)	975, 1461
BseLI	CCNNNNNNNGG	3 cut(s)	77, 680, 2174
BseNI	ACTGG	3 cut(s)	391, 1221, 2189
BseRI	GAGGAG	3 cut(s)	645, 776, 1843
BseXI	GCAGC	4 cut(s)	293, 1513, 1535, 1636
Bsh1236I	CGCG	1 cut(s)	1948
BshFI	GGCC	4 cut(s)	671, 1580, 1804, 2361
BshTI	ACCGGT	2 cut(s)	2085, 2333
BsiHKAI	GWGCWC	3 cut(s)	366, 511, 2401
BsiSI	CCGG	6 cut(s)	309, 1907, 2086, 2196, 2334, 2475
BslFI	GGGAC	4 cut(s)	697, 1527, 1958, 2111
BslI	CCNNNNNNNGG	3 cut(s)	77, 680, 2174
BsmAI	GTCTC	5 cut(s)	719, 1360, 1789, 1947, 2484
BsmFI	GGGAC	4 cut(s)	697, 1527, 1958, 2111
BsnI	GGCC	4 cut(s)	671, 1580, 1804, 2361
Bsp1286I	GDGCHC	3 cut(s)	366, 511, 2401
Bsp1720I	GCTNAGC	1 cut(s)	621
Bsp19I	CCATGG	2 cut(s)	1637, 2675
BspACI	CCGC	1 cut(s)	1946
BspANI	GGCC	4 cut(s)	671, 1580, 1804, 2361
BspFNI	CGCG	1 cut(s)	1948
BspHI	TCATGA	2 cut(s)	868, 2404
BspLI	GGNNCC	5 cut(s)	211, 672, 951, 1129, 2189
BspMAI	CTGCAG	3 cut(s)	283, 1189, 1285
BspPI	GGATC	5 cut(s)	269, 470, 978, 1122, 1135
BspQI	GCTCTTC	1 cut(s)	2389
BsrFI	RCCGGY	2 cut(s)	2085, 2333
BsrI	ACTGG	3 cut(s)	391, 1221, 2189
BssAI	RCCGGY	2 cut(s)	2085, 2333
BssECI	CCNNGG	8 cut(s)	134, 160, 673, 731, 1557, 1637, 1746, 2675
BssSI	CACGAG	2 cut(s)	843, 2259
BssT1I	CCWWGG	6 cut(s)	134, 160, 1557, 1637, 1746, 2675
Bst2BI	CACGAG	2 cut(s)	843, 2259
Bst2UI	CCWGG	6 cut(s)	675, 954, 1214, 1310, 1340, 1890
Bst4CI	ACNGT	7 cut(s)	344, 368, 645, 1411, 1831, 2247, 2381
Bst6I	CTCTTC	4 cut(s)	10, 2389, 2450, 2697
BstAPI	GCANNNNNTGC	2 cut(s)	1193, 1289
BstC8I	GCNNGC	1 cut(s)	131
BstDSI	CCRYGG	3 cut(s)	731, 1637, 2675
BstF5I	GGATG	6 cut(s)	67, 478, 1177, 1267, 1498, 1756
BstFNI	CGCG	1 cut(s)	1948
BstH2I	RGCGCY	2 cut(s)	180, 2259
BstHHI	GCGC	3 cut(s)	179, 1523, 2258
BstMAI	GTCTC	5 cut(s)	719, 1360, 1789, 1947, 2484
BstMWI	GCNNNNNNNGC	4 cut(s)	785, 913, 1193, 1289
BstNI	CCWGG	6 cut(s)	675, 954, 1214, 1310, 1340, 1890
BstNSI	RCATGY	3 cut(s)	232, 2424, 2635
BstSCI	CCNGG	7 cut(s)	308, 673, 952, 1212, 1308, 1338, 1888
BstSFI	CTRYAG	6 cut(s)	51, 279, 1185, 1281, 1359, 1410
BstUI	CGCG	1 cut(s)	1948
BstV1I	GCAGC	4 cut(s)	293, 1513, 1535, 1636
BstV2I	GAAGAC	2 cut(s)	1341, 1412
BstX2I	RGATCY	3 cut(s)	883, 1127, 1867
BstXI	CCANNNNNNTGG	1 cut(s)	1316
BstYI	RGATCY	3 cut(s)	883, 1127, 1867
BsuI	GTATCC	1 cut(s)	730
BsuRI	GGCC	4 cut(s)	671, 1580, 1804, 2361
BtgI	CCRYGG	3 cut(s)	731, 1637, 2675
BtgZI	GCGATG	1 cut(s)	2564
BtsCI	GGATG	6 cut(s)	67, 478, 1177, 1267, 1498, 1756
BtsIMutI	CAGTG	1 cut(s)	1425
Cac8I	GCNNGC	1 cut(s)	131
CaiI	CAGNNNCTG	8 cut(s)	440, 563, 608, 620, 1193, 1289, 1529, 2245
CciI	TCATGA	2 cut(s)	868, 2404
CfoI	GCGC	3 cut(s)	179, 1523, 2258
Cfr10I	RCCGGY	2 cut(s)	2085, 2333
Cfr13I	GGNCC	4 cut(s)	670, 956, 2187, 2336
CsiI	ACCWGGT	1 cut(s)	952
Csp6I	GTAC	2 cut(s)	384, 2377
CspAI	ACCGGT	2 cut(s)	2085, 2333
CviAII	CATG	9 cut(s)	229, 869, 1638, 1937, 2164, 2405, 2421, 2632, 2676
CviQI	GTAC	2 cut(s)	384, 2377
EaeI	YGGCCR	2 cut(s)	1578, 1802
Eam1104I	CTCTTC	4 cut(s)	10, 2389, 2450, 2697
EarI	CTCTTC	4 cut(s)	10, 2389, 2450, 2697
Eco130I	CCWWGG	6 cut(s)	134, 160, 1557, 1637, 1746, 2675
Eco32I	GATATC	3 cut(s)	1696, 2237, 2434
Eco47I	GGWCC	3 cut(s)	956, 2187, 2336
Eco47III	AGCGCT	1 cut(s)	2257
Eco57I	CTGAAG	3 cut(s)	585, 1551, 2327
EcoO109I	RGGNCCY	1 cut(s)	956
EcoRII	CCWGG	6 cut(s)	673, 952, 1212, 1308, 1338, 1888
EcoRV	GATATC	3 cut(s)	1696, 2237, 2434
EcoT14I	CCWWGG	6 cut(s)	134, 160, 1557, 1637, 1746, 2675
ErhI	CCWWGG	6 cut(s)	134, 160, 1557, 1637, 1746, 2675
FaeI	CATG	9 cut(s)	232, 872, 1641, 1940, 2167, 2408, 2424, 2635, 2679
FaqI	GGGAC	4 cut(s)	697, 1527, 1958, 2111
FatI	CATG	9 cut(s)	228, 868, 1637, 1936, 2163, 2404, 2420, 2631, 2675
FauNDI	CATATG	1 cut(s)	1548
FblI	GTMKAC	2 cut(s)	1440, 1951
Fnu4HI	GCNGC	4 cut(s)	282, 1524, 1527, 1650
FokI	GGATG	6 cut(s)	54, 485, 1184, 1274, 1505, 1763
Fsp4HI	GCNGC	4 cut(s)	282, 1524, 1527, 1650
FspBI	CTAG	3 cut(s)	927, 1434, 1685
GlaI	GCGC	3 cut(s)	178, 1522, 2257
GluI	GCNGC	4 cut(s)	282, 1524, 1527, 1650
GsuI	CTGGAG	2 cut(s)	408, 923
HaeII	RGCGCY	2 cut(s)	180, 2259
HaeIII	GGCC	4 cut(s)	671, 1580, 1804, 2361
HapII	CCGG	6 cut(s)	309, 1907, 2086, 2196, 2334, 2475
HhaI	GCGC	3 cut(s)	179, 1523, 2258
Hin1II	CATG	9 cut(s)	232, 872, 1641, 1940, 2167, 2408, 2424, 2635, 2679
Hin6I	GCGC	3 cut(s)	177, 1521, 2256
HinP1I	GCGC	3 cut(s)	177, 1521, 2256
HincII	GTYRAC	2 cut(s)	1441, 2626
HindII	GTYRAC	2 cut(s)	1441, 2626
HindIII	AAGCTT	1 cut(s)	2207
HpaII	CCGG	6 cut(s)	309, 1907, 2086, 2196, 2334, 2475
HphI	GGTGA	5 cut(s)	260, 689, 1001, 1896, 2343
Hpy166II	GTNNAC	4 cut(s)	46, 1441, 1952, 2626
Hpy8I	GTNNAC	4 cut(s)	46, 1441, 1952, 2626
Hpy99I	CGWCG	1 cut(s)	1445
HpyAV	CCTTC	9 cut(s)	492, 692, 980, 1118, 1307, 1439, 1782, 1812, 2179
HpyCH4III	ACNGT	7 cut(s)	344, 368, 645, 1411, 1831, 2247, 2381
HpyCH4IV	ACGT	1 cut(s)	1628
HpyCH4V	TGCA	6 cut(s)	281, 788, 1187, 1283, 1488, 1544
HpyF10VI	GCNNNNNNNGC	4 cut(s)	785, 913, 1193, 1289
HpySE526I	ACGT	1 cut(s)	1628
Hsp92II	CATG	9 cut(s)	232, 872, 1641, 1940, 2167, 2408, 2424, 2635, 2679
HspAI	GCGC	3 cut(s)	177, 1521, 2256
LguI	GCTCTTC	1 cut(s)	2389
LmnI	GCTCC	2 cut(s)	894, 904
Lsp1109I	GCAGC	4 cut(s)	293, 1513, 1535, 1636
LweI	GCATC	6 cut(s)	793, 797, 862, 1531, 2003, 2062
MabI	ACCWGGT	1 cut(s)	952
MaeI	CTAG	3 cut(s)	927, 1434, 1685
MaeII	ACGT	1 cut(s)	1628
MaeIII	GTNAC	6 cut(s)	346, 1039, 1426, 1847, 2241, 2507
MflI	RGATCY	3 cut(s)	883, 1127, 1867
MhlI	GDGCHC	3 cut(s)	366, 511, 2401
MluCI	AATT	9 cut(s)	241, 298, 392, 637, 1573, 1587, 1656, 2290, 2680
MlyI	GAGTC	9 cut(s)	371, 427, 446, 721, 773, 1362, 1791, 1939, 1949
MmeI	TCCRAC	1 cut(s)	2666
MroXI	GAANNNNTTC	1 cut(s)	2444
MseI	TTAA	7 cut(s)	204, 647, 810, 1206, 1302, 1824, 2297
MslI	CAYNNNNRTG	2 cut(s)	843, 1010
MspA1I	CMGCKG	1 cut(s)	1526
MspI	CCGG	6 cut(s)	309, 1907, 2086, 2196, 2334, 2475
MspR9I	CCNGG	7 cut(s)	310, 675, 954, 1214, 1310, 1340, 1890
MvaI	CCWGG	6 cut(s)	675, 954, 1214, 1310, 1340, 1890
MvnI	CGCG	1 cut(s)	1948
MwoI	GCNNNNNNNGC	4 cut(s)	785, 913, 1193, 1289
NciI	CCSGG	1 cut(s)	310
NcoI	CCATGG	2 cut(s)	1637, 2675
NdeI	CATATG	1 cut(s)	1548
NlaIII	CATG	9 cut(s)	232, 872, 1641, 1940, 2167, 2408, 2424, 2635, 2679
NlaIV	GGNNCC	5 cut(s)	211, 672, 951, 1129, 2189
NmuCI	GTSAC	1 cut(s)	1426
NspI	RCATGY	3 cut(s)	232, 2424, 2635
PagI	TCATGA	2 cut(s)	868, 2404
PciI	ACATGT	2 cut(s)	228, 2631
PciSI	GCTCTTC	1 cut(s)	2389
PdmI	GAANNNNTTC	1 cut(s)	2444
PflFI	GACNNNGTC	1 cut(s)	436
PinAI	ACCGGT	2 cut(s)	2085, 2333
PkrI	GCNGC	4 cut(s)	283, 1525, 1528, 1651
PleI	GAGTC	9 cut(s)	371, 426, 445, 721, 772, 1361, 1791, 1938, 1948
PpsI	GAGTC	9 cut(s)	371, 426, 445, 721, 772, 1361, 1791, 1938, 1948
PpuMI	RGGWCCY	1 cut(s)	956
PscI	ACATGT	2 cut(s)	228, 2631
PshBI	ATTAAT	1 cut(s)	810
PsiI	TTATAA	1 cut(s)	2670
Psp5II	RGGWCCY	1 cut(s)	956
Psp6I	CCWGG	6 cut(s)	673, 952, 1212, 1308, 1338, 1888
PspGI	CCWGG	6 cut(s)	673, 952, 1212, 1308, 1338, 1888
PspN4I	GGNNCC	5 cut(s)	211, 672, 951, 1129, 2189
PspPI	GGNCC	4 cut(s)	670, 956, 2187, 2336
PspPPI	RGGWCCY	1 cut(s)	956
PsrI	GAACNNNNNNTAC	2 cut(s)	1878, 1910
PstI	CTGCAG	3 cut(s)	283, 1189, 1285
PstNI	CAGNNNCTG	8 cut(s)	440, 563, 608, 620, 1193, 1289, 1529, 2245
PsuI	RGATCY	3 cut(s)	883, 1127, 1867
PsyI	GACNNNGTC	1 cut(s)	436
PvuII	CAGCTG	1 cut(s)	1526
RsaI	GTAC	2 cut(s)	385, 2378
RsaNI	GTAC	2 cut(s)	384, 2377
RseI	CAYNNNNRTG	2 cut(s)	843, 1010
SalI	GTCGAC	1 cut(s)	1439
SapI	GCTCTTC	1 cut(s)	2389
SaqAI	TTAA	7 cut(s)	204, 647, 810, 1206, 1302, 1824, 2297
SatI	GCNGC	4 cut(s)	282, 1524, 1527, 1650
Sau96I	GGNCC	4 cut(s)	670, 956, 2187, 2336
SchI	GAGTC	9 cut(s)	371, 427, 446, 721, 773, 1362, 1791, 1939, 1949
ScrFI	CCNGG	7 cut(s)	310, 675, 954, 1214, 1310, 1340, 1890
SduI	GDGCHC	3 cut(s)	366, 511, 2401
SexAI	ACCWGGT	1 cut(s)	952
SfaNI	GCATC	6 cut(s)	793, 797, 862, 1531, 2003, 2062
SfcI	CTRYAG	6 cut(s)	51, 279, 1185, 1281, 1359, 1410
SinI	GGWCC	3 cut(s)	956, 2187, 2336
SmiMI	CAYNNNNRTG	2 cut(s)	843, 1010
SmlI	CTYRAG	5 cut(s)	36, 359, 425, 549, 1855
SmoI	CTYRAG	5 cut(s)	36, 359, 425, 549, 1855
SpeI	ACTAGT	1 cut(s)	926
Sse9I	AATT	9 cut(s)	241, 298, 392, 637, 1573, 1587, 1656, 2290, 2680
SsiI	CCGC	1 cut(s)	1946
SspI	AATATT	1 cut(s)	784
SspMI	CTAG	3 cut(s)	927, 1434, 1685
StyD4I	CCNGG	7 cut(s)	308, 673, 952, 1212, 1308, 1338, 1888
StyI	CCWWGG	6 cut(s)	134, 160, 1557, 1637, 1746, 2675
TaaI	ACNGT	7 cut(s)	344, 368, 645, 1411, 1831, 2247, 2381
TaiI	ACGT	1 cut(s)	1631
TaqI	TCGA	7 cut(s)	355, 408, 511, 750, 1440, 1654, 2070
TasI	AATT	9 cut(s)	241, 298, 392, 637, 1573, 1587, 1656, 2290, 2680
Tru1I	TTAA	7 cut(s)	204, 647, 810, 1206, 1302, 1824, 2297
Tru9I	TTAA	7 cut(s)	204, 647, 810, 1206, 1302, 1824, 2297
TscAI	CASTG	1 cut(s)	1425
TseFI	GTSAC	1 cut(s)	1426
TseI	GCWGC	4 cut(s)	281, 1523, 1526, 1649
Tsp45I	GTSAC	1 cut(s)	1426
TspGWI	ACGGA	6 cut(s)	113, 720, 1129, 1219, 2331, 2468
TspRI	CASTG	1 cut(s)	1425
Tth111I	GACNNNGTC	1 cut(s)	436
VpaK11BI	GGWCC	3 cut(s)	956, 2187, 2336
VspI	ATTAAT	1 cut(s)	810
XapI	RAATTY	4 cut(s)	637, 1573, 2290, 2680
XbaI	TCTAGA	1 cut(s)	1684
XceI	RCATGY	3 cut(s)	232, 2424, 2635
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2682
XmiI	GTMKAC	2 cut(s)	1440, 1951
XmnI	GAANNNNTTC	1 cut(s)	2444
XspI	CTAG	3 cut(s)	927, 1434, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.