Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0008420

Physical Location & Seq

Genomic Coordinates Forward (+)

15260316 .. 15264652

Gene Structure 4337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g12830.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGAATGTGGTTGGCAAAGTTGGGAGCCTAATTTCCCAAGGTGTTTACTCAGTTGCCACCCCTTTTCATCCGTTCGGTGGGGCTGTTGATGTTATTGTGGTTCAGCAGCAGGATGGGACGTTTAGGAGCACGCCTTGGTATGTCCGGTTTGGTAAATTTCAGGGCGTTCTCAAAGGTGCGGAGAAGATGGTCCGCATAAATGTAAATGGCATTGATGCCAGTTTCCACATGTATCTTGATAACTCGGGTGAGGCTTACTTTATAAAGGAGGTTGAGTCGGGTGAAGTAAGTGAGACAAATGGGGCTGTCAAGGATTCTGTCAATTTAGAAGCTACACAAGGGGATAATGCTTTGGATGGTGATGGCCAGAGTCATGACATTCGTAGACTTGAGCACAGTGTCTCTGATTCGGTGGTGGTTGAAATGAGAGAGGAACGCAATTCGTTTGGTGTAAACCGGATAGAGAGGGCAGAATCTGATGCTGATCGGAGGTACTATGAATTCCAAGATGAGCAATCTCCTCTAGAGGGTTCTGTTGAGTTATCGGAGTTTGGGTCGAGTCGATATGATAATTTGGACAGTGAGCATATTGTGGAATCACAGAATTTAAACTCGGAAGTTATATTGGTGAGTGTGGATGGTCATGTATTGACAGCTCCCATCTCAGCATCAGAACAAACCACAGAAAGCGTGGAGTTAGACACACCTCGATTCAATCTGGGCCCAGGTGAAGAGGCGGACTTCTGTGAAGGCAATGAGGAGTTTAGTTCAGGTGAAACTGCTTGGGCTGATTATATCAGTAAGCTGAATGCATCTACAAGTAGTGTTGCTTCTGGTAATATTAGTGGAGTTCGGACGGATGATAGTGCTATTGTATATCAGTTAGAAGTTGATGAAAGAGAAGGGGAACATTCTTGTCAAGCTCAAGAAACGCAGACTTCAACACAGGAAAGAGATCTTCAGACGCATAGCTATTCAGAAGGCACATCTACTAACAAGGCAGAGGTTTCCAAGAGCTGTTTGGAGCTAGAACAAATGGCCAAACATGAAGCGAAAGATGTTGAAAATATGGGGTCCTCATTGGGGGTTCAGAGTTCACCAGAACTATCTCATGAGACACTTCCGCTGGTTGATAGAACTGAAGATGCTACTGTTGACTTGAGAAATAACGTTGAGGCATCTTCAACTTTTAATTCTGTTTCACCCGACAACAATATACCTCCACATTTAGAAGTTGGAAATGAATCAGTTGAGAAGATTGTGCCTTCTTCAGAACAAATGAGTATTGATAGCATTTCTTTACATTCTGTCAGTAATGATCCGAACTGGAAGGATGAACAGTGTGGTACATCAGCAGCGGTTGATGGGATTGAGAGACCTGAAAGTGGAGATGAATGCAGTAAAAGTGAGCTAATAGAACCGCCAACAGAATCTTCAAGCGAAGAAACACAAAATGAGCTAATAAAACCCCCAACAGAATCGTCAAGTGAAGAAACACAAGTCCATTCAAGCATAAGGTTTGAGATTTCTCTCTGTGGGAATGAACTTCGTCCGGGTATGGGTGTGAAAGCTGCTGCTGAAACCTTTGCTGCACATCGTGTATCTGCAGAGGATTTTATAACTTCGGCAAAATCAATTTTGAAAAATGAAAATTTGATTGTCAGATACAGGGAAAGATACTTTTCGTGGGAAAAAGCAGCTCCTGCTGTTCTTGGAACCGCAGTATTTAGTCTAGATTTATCTGTTGAGCCTGAGGATGCAATTCCTGTCGAACAAGATGGCTCAGAAAAGCCAAGGCATGAGGATCGAGGAACGCCCTCCACTCCTACTGGACGCAGATGGAGGCTCTGGCCCATTCCATTTAGGAGGGTCAAAACACTTGAGCACACCGACAGTAATTCATCAAATGAGGAGGAATTTGTTGATTCTGAATCTAGTCTGCAGAACTCCCAAGTTGAAACAAGTCCTGAGTTACCCCAGAAGCAATTCGTAAGGACAAATGTTCCCACCACCGAGCAGATAGCATCTTTAAATCTCAAAGAAGGTCAAAATATGATAACTTTCAGTTTCTCTACAAGGGTTTGGGGGACACAACAGGTTGATGCACATATTTACTTGTGGAAATGGAATGCCAGAATTGTAATTTCTGATGTGGACGGAACTATTACCAAGTCGGATGTGTTAGGTCAGTTCATGCCATTAGTTGGAAAGGATTGGACGCATACTGGTGTGTCTAGACTTTTCTCTGCGATTAAGGAAAATGGATATCAGCTACTGTTTTTGAGTGCACGTGCAATCGTACAGGCATATCTAACGAGAAGCTTTTTACTCAACCTAAAACAGGATGGAAAAGCTTTACCCAATGGACCTGTTGTTATCTCACCCGATGGATTATTTCCTTCATTGTTTCGTGAAGTTGTAAGAAGAGCACCACATGAATTCAAAATTGCCTGTTTAGAGGACATTAAAAAACTCTTCCCCGCCGATTACAATCCATTCTACGCAGGATTTGGAAATAGAGACACGGATGAGCTCAGCTACAGGAAAATTGGGATTCCAAAGGGCAAAATATTCATAATCAATCCCAAGGGTGAGGTAGCCATCAGCCATCATCCCGTTGATGTGAAGACGTACACATCTTTACACACTCTTGTCAACGACATGTTTCCTCCCACTTCATTGGTTGAGCAGGAAGACTTCAACTCGTGGAACTATTGGAAAGTGCCACTACCGGAAATTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000322 GO:0000325 GO:0000326 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0006810 GO:0006886 GO:0006950 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009267 GO:0009605 GO:0009705 GO:0009987 GO:0009991 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016036 GO:0019374 GO:0019375 GO:0019637 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032586 GO:0033036 GO:0033554 GO:0034613 GO:0042594 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046467 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0070727 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0090407 GO:0098588 GO:0098791 GO:0098805 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

915

Amino Acids

101.39

Weight (kDa)

4.67

Isoelectric Point (pI)

43.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09560 AT3G09560 AT3G09560 AT3G09560 AT5G42870
fragaria_vesca	FvH4_6g14720
malus_domestica	MD04G1116800.v1.1 MD12G1132500.v1.1
prunus_persica	Prupe.6G246600_v2.0.a1 Prupe.6G246600_v2.0.a1
pyrus_communis	pycom04g10670 pycom12g12830
rosa_chinensis	RchiOBHm_Chr3g0467941
rosa_laevigata	RLG00000024465
rosa_multiflora	Rmu_sc0001793.1_g000056 Rmu_sc0006017.1_g000005
rosa_roxburghii	Rroxscaffold_6G00413270
rosa_rugosa	Rorug03G0090600
rosa_samantha	Rh3AG139100 Rh3BG160700 Rh3CG160600 Rh3DG161200
rosa_wichuraiana	Rw3G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	263, 1619
AccB7I	CCANNNNNTGG	1 cut(s)	2204
AccI	GTMKAC	1 cut(s)	385
AciI	CCGC	8 cut(s)	179, 193, 737, 1124, 1358, 1421, 1719, 2481
AclI	AACGTT	1 cut(s)	1170
AclWI	GGATC	2 cut(s)	1313, 1812
AcoI	YGGCCR	2 cut(s)	364, 1038
AcsI	RAATTY	6 cut(s)	155, 500, 604, 1651, 1916, 2438
AcuI	CTGAAG	3 cut(s)	944, 1161, 1254
AcvI	CACGTG	1 cut(s)	2291
AdeI	CACNNNGTG	1 cut(s)	1598
AfaI	GTAC	4 cut(s)	494, 1348, 2301, 2633
AfiI	CCNNNNNNNGG	7 cut(s)	77, 527, 1083, 1385, 1559, 2204, 2341
AflIII	ACRYGT	2 cut(s)	228, 2661
AjnI	CCWGG	1 cut(s)	724
AjuI	GAANNNNNNNTTGG	2 cut(s)	1417, 1449
Alw21I	GWGCWC	6 cut(s)	131, 396, 1887, 2290, 2431, 2535
Alw26I	GTCTC	5 cut(s)	287, 406, 1109, 1369, 2514
Alw44I	GTGCAC	1 cut(s)	2286
AlwI	GGATC	2 cut(s)	1313, 1812
AlwNI	CAGNNNCTG	3 cut(s)	476, 1703, 2275
Ama87I	CYCGRG	1 cut(s)	244
AoxI	GGCC	4 cut(s)	364, 721, 1038, 1850
ApaI	GGGCCC	1 cut(s)	725
ApaLI	GTGCAC	1 cut(s)	2286
ApeKI	GCWGC	6 cut(s)	106, 1355, 1571, 1574, 1589, 1697
ApoI	RAATTY	6 cut(s)	155, 500, 604, 1651, 1916, 2438
Asp700I	GAANNNNTTC	1 cut(s)	1985
AspS9I	GGNCC	6 cut(s)	190, 721, 722, 1074, 1851, 2366
AsuC2I	CCSGG	1 cut(s)	1554
AvaI	CYCGRG	1 cut(s)	244
AvaII	GGWCC	3 cut(s)	190, 1074, 2366
AxyI	CCTNAGG	1 cut(s)	1752
BaeGI	GKGCMC	2 cut(s)	725, 2290
BalI	TGGCCA	2 cut(s)	366, 1040
BanII	GRGCYC	2 cut(s)	725, 2535
BarI	GAAGNNNNNNTAC	2 cut(s)	814, 846
BauI	CACGAG	1 cut(s)	2704
BbrPI	CACGTG	1 cut(s)	2291
BbsI	GAAGAC	2 cut(s)	2633, 2700
Bbv12I	GWGCWC	6 cut(s)	131, 396, 1887, 2290, 2431, 2535
BbvI	GCAGC	6 cut(s)	118, 1367, 1558, 1561, 1576, 1709
BcgI	CGANNNNNNTGC	2 cut(s)	1787, 1821
BciT130I	CCWGG	1 cut(s)	726
BcnI	CCSGG	1 cut(s)	1554
BcoDI	GTCTC	5 cut(s)	287, 406, 1109, 1369, 2514
BfaI	CTAG	5 cut(s)	524, 1028, 1733, 1935, 2235
BfmI	CTRYAG	3 cut(s)	1605, 1940, 2539
BglII	AGATCT	1 cut(s)	955
BisI	GCNGC	6 cut(s)	107, 1356, 1572, 1575, 1590, 1698
BlpI	GCTNAGC	1 cut(s)	2534
BlsI	GCNGC	6 cut(s)	108, 1357, 1573, 1576, 1591, 1699
Bme1390I	CCNGG	2 cut(s)	726, 1554
Bme18I	GGWCC	3 cut(s)	190, 1074, 2366
BmeT110I	CYCGRG	1 cut(s)	244
BmgT120I	GGNCC	6 cut(s)	190, 721, 722, 1074, 1851, 2366
BmiI	GGNNCC	4 cut(s)	26, 723, 1075, 1717
BmrFI	CCNGG	2 cut(s)	726, 1554
BmsI	GCATC	9 cut(s)	205, 469, 677, 821, 1135, 1187, 1747, 2033, 2092
BpiI	GAAGAC	2 cut(s)	2633, 2700
Bpu1102I	GCTNAGC	1 cut(s)	2534
BpuEI	CTTGAG	4 cut(s)	410, 909, 1180, 1901
BpuMI	CCSGG	1 cut(s)	1554
BsaAI	YACGTR	1 cut(s)	2291
BsaBI	GATNNNNATC	2 cut(s)	483, 2490
BsaI	GGTCTC	1 cut(s)	1369
BsaJI	CCNNGG	5 cut(s)	37, 134, 724, 1793, 2586
BsaWI	WCCGGW	3 cut(s)	144, 456, 2731
BsaXI	ACNNNNNCTCC	4 cut(s)	260, 290, 539, 569
Bsc4I	CCNNNNNNNGG	7 cut(s)	77, 527, 1083, 1385, 1559, 2204, 2341
Bse1I	ACTGG	4 cut(s)	219, 1331, 1834, 2230
Bse21I	CCTNAGG	1 cut(s)	1752
Bse3DI	GCAATG	1 cut(s)	760
Bse8I	GATNNNNATC	2 cut(s)	483, 2490
BseBI	CCWGG	1 cut(s)	726
BseDI	CCNNGG	5 cut(s)	37, 134, 724, 1793, 2586
BseJI	GATNNNNATC	2 cut(s)	483, 2490
BseLI	CCNNNNNNNGG	7 cut(s)	77, 527, 1083, 1385, 1559, 2204, 2341
BseMI	GCAATG	1 cut(s)	760
BseMII	CTCAG	6 cut(s)	63, 678, 1743, 1797, 1959, 2548
BseNI	ACTGG	4 cut(s)	219, 1331, 1834, 2230
BseRI	GAGGAG	3 cut(s)	510, 773, 1925
BseSI	GKGCMC	2 cut(s)	725, 2290
BseXI	GCAGC	6 cut(s)	118, 1367, 1558, 1561, 1576, 1709
BsgI	GTGCAG	1 cut(s)	1575
BshFI	GGCC	4 cut(s)	366, 723, 1040, 1852
BsiHKAI	GWGCWC	6 cut(s)	131, 396, 1887, 2290, 2431, 2535
BsiHKCI	CYCGRG	1 cut(s)	244
BsiSI	CCGG	4 cut(s)	145, 457, 1553, 2732
BslFI	GGGAC	2 cut(s)	130, 2101
BslI	CCNNNNNNNGG	7 cut(s)	77, 527, 1083, 1385, 1559, 2204, 2341
BsmAI	GTCTC	5 cut(s)	287, 406, 1109, 1369, 2514
BsmFI	GGGAC	2 cut(s)	130, 2101
BsmI	GAATGC	3 cut(s)	814, 1400, 2134
BsnI	GGCC	4 cut(s)	366, 723, 1040, 1852
Bso31I	GGTCTC	1 cut(s)	1369
BsoBI	CYCGRG	1 cut(s)	244
Bsp120I	GGGCCC	1 cut(s)	721
Bsp1286I	GDGCHC	7 cut(s)	131, 396, 725, 1887, 2290, 2431, 2535
Bsp143I	GATC	4 cut(s)	484, 955, 1318, 1804
Bsp1720I	GCTNAGC	1 cut(s)	2534
BspACI	CCGC	8 cut(s)	179, 193, 737, 1124, 1358, 1421, 1719, 2481
BspANI	GGCC	4 cut(s)	366, 723, 1040, 1852
BspCNI	CTCAG	6 cut(s)	62, 677, 1744, 1796, 1960, 2547
BspHI	TCATGA	2 cut(s)	373, 1111
BspLI	GGNNCC	4 cut(s)	26, 723, 1075, 1717
BspMAI	CTGCAG	2 cut(s)	1609, 1944
BspPI	GGATC	2 cut(s)	1313, 1812
BspQI	GCTCTTC	1 cut(s)	2419
BspTNI	GGTCTC	1 cut(s)	1369
BsrDI	GCAATG	1 cut(s)	760
BsrI	ACTGG	4 cut(s)	219, 1331, 1834, 2230
BssECI	CCNNGG	5 cut(s)	37, 134, 724, 1793, 2586
BssMI	GATC	4 cut(s)	484, 955, 1318, 1804
BssSI	CACGAG	1 cut(s)	2704
BssT1I	CCWWGG	4 cut(s)	37, 134, 1793, 2586
Bst2BI	CACGAG	1 cut(s)	2704
Bst2UI	CCWGG	1 cut(s)	726
Bst4CI	ACNGT	6 cut(s)	398, 581, 1153, 1341, 1895, 2277
Bst6I	CTCTTC	3 cut(s)	726, 2419, 2480
BstAPI	GCANNNNNTGC	1 cut(s)	1703
BstBAI	YACGTR	1 cut(s)	2291
BstC8I	GCNNGC	1 cut(s)	131
BstDEI	CTNAG	6 cut(s)	49, 664, 1752, 1783, 1968, 2534
BstENI	CCTNNNNNAGG	1 cut(s)	2339
BstKTI	GATC	4 cut(s)	487, 958, 1321, 1807
BstMAI	GTCTC	5 cut(s)	287, 406, 1109, 1369, 2514
BstMBI	GATC	4 cut(s)	484, 955, 1318, 1804
BstMWI	GCNNNNNNNGC	1 cut(s)	1703
BstNI	CCWGG	1 cut(s)	726
BstNSI	RCATGY	2 cut(s)	232, 2665
BstSCI	CCNGG	2 cut(s)	724, 1552
BstSFI	CTRYAG	3 cut(s)	1605, 1940, 2539
BstSLI	GKGCMC	2 cut(s)	725, 2290
BstV1I	GCAGC	6 cut(s)	118, 1367, 1558, 1561, 1576, 1709
BstV2I	GAAGAC	2 cut(s)	2633, 2700
BstX2I	RGATCY	1 cut(s)	955
BstXI	CCANNNNNNTGG	1 cut(s)	2680
BstYI	RGATCY	1 cut(s)	955
Bsu36I	CCTNAGG	1 cut(s)	1752
BsuRI	GGCC	4 cut(s)	366, 723, 1040, 1852
BtsIMutI	CAGTG	3 cut(s)	403, 586, 1346
Cac8I	GCNNGC	1 cut(s)	131
CaiI	CAGNNNCTG	3 cut(s)	476, 1703, 2275
CciI	TCATGA	2 cut(s)	373, 1111
Cfr13I	GGNCC	6 cut(s)	190, 721, 722, 1074, 1851, 2366
CseI	GACGC	3 cut(s)	973, 1842, 2227
Csp6I	GTAC	4 cut(s)	493, 1347, 2300, 2632
CviAII	CATG	9 cut(s)	229, 374, 644, 1046, 1112, 1799, 2194, 2435, 2662
CviQI	GTAC	4 cut(s)	493, 1347, 2300, 2632
DdeI	CTNAG	6 cut(s)	49, 664, 1752, 1783, 1968, 2534
DpnI	GATC	4 cut(s)	486, 957, 1320, 1806
DpnII	GATC	4 cut(s)	484, 955, 1318, 1804
DraI	TTTAAA	2 cut(s)	609, 2031
DraIII	CACNNNGTG	1 cut(s)	1598
EaeI	YGGCCR	2 cut(s)	364, 1038
Eam1104I	CTCTTC	3 cut(s)	726, 2419, 2480
EarI	CTCTTC	3 cut(s)	726, 2419, 2480
EciI	GGCGGA	1 cut(s)	752
Ecl136II	GAGCTC	1 cut(s)	2533
Eco130I	CCWWGG	4 cut(s)	37, 134, 1793, 2586
Eco24I	GRGCYC	2 cut(s)	725, 2535
Eco31I	GGTCTC	1 cut(s)	1369
Eco32I	GATATC	1 cut(s)	2267
Eco47I	GGWCC	3 cut(s)	190, 1074, 2366
Eco53kI	GAGCTC	1 cut(s)	2533
Eco57I	CTGAAG	3 cut(s)	944, 1161, 1254
Eco72I	CACGTG	1 cut(s)	2291
Eco81I	CCTNAGG	1 cut(s)	1752
Eco88I	CYCGRG	1 cut(s)	244
EcoICRI	GAGCTC	1 cut(s)	2533
EcoNI	CCTNNNNNAGG	1 cut(s)	2339
EcoO109I	RGGNCCY	1 cut(s)	1074
EcoRI	GAATTC	2 cut(s)	500, 2438
EcoRII	CCWGG	1 cut(s)	724
EcoRV	GATATC	1 cut(s)	2267
EcoT14I	CCWWGG	4 cut(s)	37, 134, 1793, 2586
EcoT22I	ATGCAT	1 cut(s)	814
EcoT38I	GRGCYC	2 cut(s)	725, 2535
ErhI	CCWWGG	4 cut(s)	37, 134, 1793, 2586
FaeI	CATG	9 cut(s)	232, 377, 647, 1049, 1115, 1802, 2197, 2438, 2665
FaqI	GGGAC	2 cut(s)	130, 2101
FatI	CATG	9 cut(s)	228, 373, 643, 1045, 1111, 1798, 2193, 2434, 2661
FauI	CCCGC	1 cut(s)	2488
FblI	GTMKAC	1 cut(s)	385
Fnu4HI	GCNGC	6 cut(s)	107, 1356, 1572, 1575, 1590, 1698
FriOI	GRGCYC	2 cut(s)	725, 2535
Fsp4HI	GCNGC	6 cut(s)	107, 1356, 1572, 1575, 1590, 1698
FspBI	CTAG	5 cut(s)	524, 1028, 1733, 1935, 2235
GluI	GCNGC	6 cut(s)	107, 1356, 1572, 1575, 1590, 1698
HaeIII	GGCC	4 cut(s)	366, 723, 1040, 1852
HapII	CCGG	4 cut(s)	145, 457, 1553, 2732
HgaI	GACGC	3 cut(s)	973, 1842, 2227
Hin1II	CATG	9 cut(s)	232, 377, 647, 1049, 1115, 1802, 2197, 2438, 2665
HincII	GTYRAC	2 cut(s)	1156, 2656
HindII	GTYRAC	2 cut(s)	1156, 2656
HindIII	AAGCTT	2 cut(s)	2320, 2352
HpaII	CCGG	4 cut(s)	145, 457, 1553, 2732
Hpy166II	GTNNAC	9 cut(s)	46, 386, 454, 1097, 1156, 2155, 2288, 2634, 2656
Hpy188III	TCNNGA	9 cut(s)	236, 374, 524, 926, 1112, 1733, 1967, 2235, 2411
Hpy8I	GTNNAC	9 cut(s)	46, 386, 454, 1097, 1156, 2155, 2288, 2634, 2656
HpyAV	CCTTC	7 cut(s)	743, 896, 974, 1275, 1324, 2036, 2409
HpyCH4III	ACNGT	6 cut(s)	398, 581, 1153, 1341, 1895, 2277
HpyCH4IV	ACGT	4 cut(s)	119, 1170, 2290, 2630
HpyCH4V	TGCA	9 cut(s)	812, 1398, 1592, 1607, 1760, 1942, 2105, 2288, 2294
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1703
HpyF3I	CTNAG	6 cut(s)	49, 664, 1752, 1783, 1968, 2534
HpySE526I	ACGT	4 cut(s)	119, 1170, 2290, 2630
Hsp92II	CATG	9 cut(s)	232, 377, 647, 1049, 1115, 1802, 2197, 2438, 2665
Kzo9I	GATC	4 cut(s)	484, 955, 1318, 1804
LguI	GCTCTTC	1 cut(s)	2419
LmnI	GCTCC	5 cut(s)	24, 126, 661, 1024, 1705
Lsp1109I	GCAGC	6 cut(s)	118, 1367, 1558, 1561, 1576, 1709
LweI	GCATC	9 cut(s)	205, 469, 677, 821, 1135, 1187, 1747, 2033, 2092
MaeI	CTAG	5 cut(s)	524, 1028, 1733, 1935, 2235
MaeII	ACGT	4 cut(s)	119, 1170, 2290, 2630
MaeIII	GTNAC	1 cut(s)	1971
MalI	GATC	4 cut(s)	486, 957, 1320, 1806
MboI	GATC	4 cut(s)	484, 955, 1318, 1804
MflI	RGATCY	1 cut(s)	955
MhlI	GDGCHC	7 cut(s)	131, 396, 725, 1887, 2290, 2431, 2535
MlsI	TGGCCA	2 cut(s)	366, 1040
MluNI	TGGCCA	2 cut(s)	366, 1040
MlyI	GAGTC	3 cut(s)	284, 379, 568
MmeI	TCCRAC	3 cut(s)	1216, 2154, 2185
Mox20I	TGGCCA	2 cut(s)	366, 1040
Mph1103I	ATGCAT	1 cut(s)	814
MroXI	GAANNNNTTC	1 cut(s)	1985
MscI	TGGCCA	2 cut(s)	366, 1040
MseI	TTAA	5 cut(s)	608, 1191, 2030, 2253, 2466
MslI	CAYNNNNRTG	1 cut(s)	2226
Msp20I	TGGCCA	2 cut(s)	366, 1040
MspA1I	CMGCKG	2 cut(s)	1126, 1358
MspI	CCGG	4 cut(s)	145, 457, 1553, 2732
MspR9I	CCNGG	2 cut(s)	726, 1554
Mva1269I	GAATGC	3 cut(s)	814, 1400, 2134
MvaI	CCWGG	1 cut(s)	726
MwoI	GCNNNNNNNGC	1 cut(s)	1703
NciI	CCSGG	1 cut(s)	1554
NdeII	GATC	4 cut(s)	484, 955, 1318, 1804
NlaIII	CATG	9 cut(s)	232, 377, 647, 1049, 1115, 1802, 2197, 2438, 2665
NlaIV	GGNNCC	4 cut(s)	26, 723, 1075, 1717
NsiI	ATGCAT	1 cut(s)	814
NspI	RCATGY	2 cut(s)	232, 2665
PagI	TCATGA	2 cut(s)	373, 1111
PciI	ACATGT	2 cut(s)	228, 2661
PciSI	GCTCTTC	1 cut(s)	2419
PctI	GAATGC	3 cut(s)	814, 1400, 2134
PdmI	GAANNNNTTC	1 cut(s)	1985
PflMI	CCANNNNNTGG	1 cut(s)	2204
PkrI	GCNGC	6 cut(s)	108, 1357, 1573, 1576, 1591, 1699
PleI	GAGTC	3 cut(s)	283, 378, 567
PmaCI	CACGTG	1 cut(s)	2291
PmlI	CACGTG	1 cut(s)	2291
PpsI	GAGTC	3 cut(s)	283, 378, 567
Ppu21I	YACGTR	1 cut(s)	2291
PpuMI	RGGWCCY	1 cut(s)	1074
PscI	ACATGT	2 cut(s)	228, 2661
PsiI	TTATAA	2 cut(s)	263, 1619
Psp124BI	GAGCTC	1 cut(s)	2535
Psp1406I	AACGTT	1 cut(s)	1170
Psp5II	RGGWCCY	1 cut(s)	1074
Psp6I	CCWGG	1 cut(s)	724
PspCI	CACGTG	1 cut(s)	2291
PspGI	CCWGG	1 cut(s)	724
PspN4I	GGNNCC	4 cut(s)	26, 723, 1075, 1717
PspOMI	GGGCCC	1 cut(s)	721
PspPI	GGNCC	6 cut(s)	190, 721, 722, 1074, 1851, 2366
PspPPI	RGGWCCY	1 cut(s)	1074
PstI	CTGCAG	2 cut(s)	1609, 1944
PstNI	CAGNNNCTG	3 cut(s)	476, 1703, 2275
PsuI	RGATCY	1 cut(s)	955
RsaI	GTAC	4 cut(s)	494, 1348, 2301, 2633
RsaNI	GTAC	4 cut(s)	493, 1347, 2300, 2632
RseI	CAYNNNNRTG	1 cut(s)	2226
SacI	GAGCTC	1 cut(s)	2535
SapI	GCTCTTC	1 cut(s)	2419
SaqAI	TTAA	5 cut(s)	608, 1191, 2030, 2253, 2466
SatI	GCNGC	6 cut(s)	107, 1356, 1572, 1575, 1590, 1698
Sau3AI	GATC	4 cut(s)	484, 955, 1318, 1804
Sau96I	GGNCC	6 cut(s)	190, 721, 722, 1074, 1851, 2366
SchI	GAGTC	3 cut(s)	284, 379, 568
ScrFI	CCNGG	2 cut(s)	726, 1554
SduI	GDGCHC	7 cut(s)	131, 396, 725, 1887, 2290, 2431, 2535
SfaNI	GCATC	9 cut(s)	205, 469, 677, 821, 1135, 1187, 1747, 2033, 2092
SfcI	CTRYAG	3 cut(s)	1605, 1940, 2539
SinI	GGWCC	3 cut(s)	190, 1074, 2366
SmiMI	CAYNNNNRTG	1 cut(s)	2226
SmlI	CTYRAG	4 cut(s)	389, 924, 1159, 1880
SmoI	CTYRAG	4 cut(s)	389, 924, 1159, 1880
SsiI	CCGC	8 cut(s)	179, 193, 737, 1124, 1358, 1421, 1719, 2481
SspI	AATATT	2 cut(s)	841, 2571
SspMI	CTAG	5 cut(s)	524, 1028, 1733, 1935, 2235
SstI	GAGCTC	1 cut(s)	2535
StyD4I	CCNGG	2 cut(s)	724, 1552
StyI	CCWWGG	4 cut(s)	37, 134, 1793, 2586
TaaI	ACNGT	6 cut(s)	398, 581, 1153, 1341, 1895, 2277
TaiI	ACGT	4 cut(s)	122, 1173, 2293, 2633
TaqI	TCGA	5 cut(s)	557, 562, 709, 1770, 1807
Tru1I	TTAA	5 cut(s)	608, 1191, 2030, 2253, 2466
Tru9I	TTAA	5 cut(s)	608, 1191, 2030, 2253, 2466
TscAI	CASTG	3 cut(s)	403, 586, 1346
TseI	GCWGC	6 cut(s)	106, 1355, 1571, 1574, 1589, 1697
TspGWI	ACGGA	4 cut(s)	60, 872, 2172, 2540
TspRI	CASTG	3 cut(s)	403, 586, 1346
Van91I	CCANNNNNTGG	1 cut(s)	2204
VneI	GTGCAC	1 cut(s)	2286
VpaK11BI	GGWCC	3 cut(s)	190, 1074, 2366
XagI	CCTNNNNNAGG	1 cut(s)	2339
XapI	RAATTY	6 cut(s)	155, 500, 604, 1651, 1916, 2438
XbaI	TCTAGA	3 cut(s)	523, 1732, 2234
XceI	RCATGY	2 cut(s)	232, 2665
XcmI	CCANNNNNNNNNTGG	2 cut(s)	688, 1018
XmiI	GTMKAC	1 cut(s)	385
XmnI	GAANNNNTTC	1 cut(s)	1985
XspI	CTAG	5 cut(s)	524, 1028, 1733, 1935, 2235
Zsp2I	ATGCAT	1 cut(s)	814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.