Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008420

Physical Location & Seq

Genomic Coordinates Reverse (-)

9079223 .. 9085498

Gene Structure 6276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g14720.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2766 bp

ATGAATGTGGTTGGCAAAGTTGGGAGCCTAATTTCCCAAGGTGTTTACTCTGTTGCCACCCCCTTTCATCCTTTCGGCGGGGCAGTTGATGTCATTGTTGTTCAGCAGCAAGATGGGACGTTCCGAAGTACACCTTGGTATGTTCGGTTTGGAAAATTTCAGGGTGTTTTGAAAGGTGCGGAGAAGGTTGTTCGGATAAATGTGAATGGCATCGATGCCAACTTCCATATGTATCTTGATAACTCGGGTGAGGCTTACTTTATAAGGGAGGTTGATCCTAGCAAAGGAAGTGAGGCGAATGGGGCTGATCCGGATAATTTAAAACGAGAAGATGGAGATGGCCAGAATGCAGGTAATCTTGACCATCCTAGACTTGAGCATAGTGTCTCTGATTCGGCAGTGTTGCATGAATGTGATTCATTTGGTGCAAATCGGTTAGAGAGGGCGGAATCTGATGTTGATCGGAAGTTTTATGAATTTCAAGATGATCAATCTTCTCTAGAAGGTTCAGCTGAGTTATCAGAGTATGGGTCGTCTCGATATGATAATTTTGATACTGATCTTCTTGGGGAATCACAGACTTTAAGCCCAGAAGTTATATTGGTGAGTGTGGATGGTCATGTATTGACTGCCCCCATCTCAGCATCAGAACAGAATGCAGAGAATTTGCAATTAGACACGCCTCGGTTTAATCTGGGCCCCGGTGAAGAGACTGACTTCTGTGAAGGAAATGAGGAGTTGAGTTCGGGAGAGAATGCTTGGGCCGCTGATTATATTAGTAAGCTGGATGCACCTAGAACTAGTGTTGCAGCCAGTAAAGTTCGCAGCATTCAAAATAATAATAATGATACTGGTCTCCAAATTGAAGTTTGTGAAGGAAAAGAAGAACAGGCCTATCAAGCTCAAGAAACTCAAAAGACTTCAAGCCCGGACAGGGATCTTCAGATGCATAGTGATTCAGAAGATGTAATTGCTAATAAGGCAGAGCTTTCTGGGAGCTGCTTGGAGCTAACAGAGCTGGGCGAACGTGCTGGTAAAAATGATGTTGAAGATGAGGATTCAACAGAACAGTCTCAACAGACTCTGGATGCTGGTATTGTCGAACTAAAAAAGAACAATGAGTTGTCTGCTTCCTGTGGTTCTGATTTACCTGACAACAATATGTCTCCAGATTTACAAGTTGGAAATGATTCAGGACTTGCATCTGAGGCTAGTGTTGACAGCACTTCAATGTATTCTGTCAGCAATGATATAGAAAGGAAGGATGAACAAATGGGTGCTGACAGCAGTTCTGTTCAGTCTGTCAGCTTTGATTTTGAAAGGAAGGATGAACAAATTTCCGCACATTCTGTCAGCAATGGTTTAGAACGGAAGGAAGAAGAAATCAGTAATGACAGTGTATCTGAACATTCTGTCAGCAATGCATTGGCAGAAGTTAATGGGACAGAGACTGGGCAAGAAAGAGGTGAAACCGGAGATGAATGCAGTAAAAGTGAGTTGATAGAACCAGGAACAGCATCTACCAGTGAAATAACACAAGATTATTCAAGTACTAGGTTTGAGATCTCACTGTGTAGGAATGAACTTCGGGCGGGTATGGGCATGACTGCTGCTGCTGAAGCCTTTGATGCCCATCATGTTTCTGCAGAGGATTTCAAAGCTTCTGCTTCAGCAATTATAAAAAATGAAAACCTGATCATCAGATTTAAAGATAGATACTTTTCATGGGAGAAAGCAGCTCCTGTTGTTCTCGGAATGGCTGCATTTGGTCTAGATTTACCCCTTGAGAGCAAGGATGCAATTCCTGTAGAACAAGATGATACAGAAAAACCGTCCACTCCTTCTGGACGCAGATGGAGGCTGTGGGCTATTCCATTCCGAAGGGTCAAAACACTTGAGCACACCAGCAGTAATTCTTCAAATGAGGAGGAATTTGTTGATTCTGAATCCAGTTTGCATAACTCTCAAGTTGAAGCAACTCCTGAGTCCCCTCAAAAGCAATTTGTAAGGACAAATATTCCCACCACTGAGCAGATAGCATCTCTAAATCTCAAAGATGGCCAAAATGTGATAACTTTCAGTTTCTCTACCAGAGTTTTAGGAACACAACAGGTCGATGCACATATATACTTGTGGAAATGGAATGCACGCATTGTAATTTCTGATGTTGATGGAACTATCACCAAGTCTGATGTTTTAGGTCAGTTTATGCCATTAGTTGGAAAGGATTGGACACAATCTGGGGTGGCTAGATTGTTCTCTGCAATTAAGGAAAATGGATATCAGCTACTGTTTCTGAGTGCACGTGCAATTATACAGGCATACCTCACGAGAAGCTTTTTAAATAATCTAAAACAGGATGGAAAAGCTTTACCCAGTGGACCTGTTGTTATCTCACCTGATGGATTATTTCCTTCATTATTTCGCGAAGTTGTAAGAAGAGCACCGCATGAATTCAAAATTGCCTGTTTAGAGGACATAAAAAAACTATTCCCCCAGGATTACAATCCATTTTATGCGGGTTTTGGAAATAGAGATACAGATGAGCTCAGCTACAGAAAAATTGGGATTCCAAAGGGCAAGATTTTTATAATCAATCCCAAGGGTGAGGTGGCCATCAGCCACCATCGTGCTGGTGATGTGAAGTCGTATACATCTTTACATACTCTTGTCAATGACATGTTTCCTCCAACTTCATTGGTTGAGCAGGAAGACTTTAACTCATGGAACTATTGGAAACTGCCATTGCCAGAAGTTGACCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000322 GO:0000325 GO:0000326 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0006810 GO:0006886 GO:0006950 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009267 GO:0009605 GO:0009705 GO:0009987 GO:0009991 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016036 GO:0019374 GO:0019375 GO:0019637 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032586 GO:0033036 GO:0033554 GO:0034613 GO:0042594 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046467 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0070727 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0090407 GO:0098588 GO:0098791 GO:0098805 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

922

Amino Acids

101.46

Weight (kDa)

4.58

Isoelectric Point (pI)

41.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipin_N	PF04571	1 - 94	3.1e-30	lipin, N-terminal conserved region
Lipin_mid	PF16876	520 - 622	1.1e-18	Lipin/Ned1/Smp2 multi-domain protein middle domain
LNS2	PF08235	672 - 896	1.7e-96	LNS2 (Lipin/Ned1/Smp2)
LNS2_PITM1-3	PF24694	719 - 865	4.6e-07	PITM 1-3, LNS2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09560 AT3G09560 AT3G09560 AT3G09560 AT5G42870
fragaria_vesca	FvH4_6g14720
malus_domestica	MD04G1116800.v1.1 MD12G1132500.v1.1
prunus_persica	Prupe.6G246600_v2.0.a1 Prupe.6G246600_v2.0.a1
pyrus_communis	pycom04g10670 pycom12g12830
rosa_chinensis	RchiOBHm_Chr3g0467941
rosa_laevigata	RLG00000024465
rosa_multiflora	Rmu_sc0001793.1_g000056 Rmu_sc0006017.1_g000005
rosa_roxburghii	Rroxscaffold_6G00413270
rosa_rugosa	Rorug03G0090600
rosa_samantha	Rh3AG139100 Rh3BG160700 Rh3CG160600 Rh3DG161200
rosa_wichuraiana	Rw3G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	263, 1679, 2591
Acc36I	ACCTGC	1 cut(s)	341
AccB7I	CCANNNNNTGG	1 cut(s)	2219
AccI	GTMKAC	1 cut(s)	2651
AccII	CGCG	1 cut(s)	2427
AccIII	TCCGGA	1 cut(s)	310
AciI	CCGC	8 cut(s)	78, 179, 446, 765, 1341, 1592, 2447, 2519
AclWI	GGATC	3 cut(s)	269, 302, 945
AcoI	YGGCCR	3 cut(s)	340, 2059, 2613
AcsI	RAATTY	6 cut(s)	155, 476, 664, 1335, 1931, 2453
AcuI	CTGAAG	3 cut(s)	926, 1638, 1653
AcvI	CACGTG	1 cut(s)	2306
AfaI	GTAC	2 cut(s)	130, 1552
AfiI	CCNNNNNNNGG	4 cut(s)	77, 284, 934, 2219
AflIII	ACRYGT	1 cut(s)	2679
AhlI	ACTAGT	1 cut(s)	800
AjnI	CCWGG	2 cut(s)	1507, 2496
AjuI	GAANNNNNNNTTGG	2 cut(s)	118, 150
AleI	CACNNNNGTG	1 cut(s)	2628
Alw21I	GWGCWC	4 cut(s)	1902, 2305, 2446, 2550
Alw26I	GTCTC	7 cut(s)	391, 540, 704, 860, 1077, 1170, 1442
Alw44I	GTGCAC	1 cut(s)	2301
AlwI	GGATC	3 cut(s)	269, 302, 945
AlwNI	CAGNNNCTG	4 cut(s)	1084, 1451, 1742, 2290
Ama87I	CYCGRG	1 cut(s)	244
Aor13HI	TCCGGA	1 cut(s)	310
AoxI	GGCC	6 cut(s)	340, 697, 762, 891, 2059, 2613
ApaI	GGGCCC	1 cut(s)	701
ApaLI	GTGCAC	1 cut(s)	2301
ApeKI	GCWGC	8 cut(s)	106, 809, 825, 999, 1610, 1613, 1736, 1760
ApoI	RAATTY	6 cut(s)	155, 476, 664, 1335, 1931, 2453
Asp700I	GAANNNNTTC	1 cut(s)	1189
AspS9I	GGNCC	4 cut(s)	697, 698, 762, 2381
AsuC2I	CCSGG	2 cut(s)	702, 929
AsuHPI	GGTGA	8 cut(s)	260, 616, 716, 1478, 2173, 2388, 2618, 2648
AvaI	CYCGRG	1 cut(s)	244
AvaII	GGWCC	1 cut(s)	2381
BaeGI	GKGCMC	2 cut(s)	701, 2305
BalI	TGGCCA	3 cut(s)	342, 2061, 2615
BanII	GRGCYC	2 cut(s)	701, 2550
BauI	CACGAG	1 cut(s)	2329
BbrPI	CACGTG	1 cut(s)	2306
BbsI	GAAGAC	1 cut(s)	2718
Bbv12I	GWGCWC	4 cut(s)	1902, 2305, 2446, 2550
BbvI	GCAGC	8 cut(s)	118, 821, 837, 986, 1597, 1600, 1747, 1748
BciT130I	CCWGG	2 cut(s)	1509, 2498
BclI	TGATCA	2 cut(s)	487, 1695
BcnI	CCSGG	2 cut(s)	702, 929
BcoDI	GTCTC	7 cut(s)	391, 540, 704, 860, 1077, 1170, 1442
BcuI	ACTAGT	1 cut(s)	800
BfaI	CTAG	9 cut(s)	279, 369, 500, 795, 801, 1212, 1554, 1772, 2250
BfmI	CTRYAG	4 cut(s)	1644, 1806, 2554, 2762
BfuAI	ACCTGC	1 cut(s)	341
BglII	AGATCT	1 cut(s)	1563
BisI	GCNGC	9 cut(s)	107, 765, 810, 826, 1000, 1611, 1614, 1737, 1761
BlpI	GCTNAGC	1 cut(s)	2549
BlsI	GCNGC	9 cut(s)	108, 766, 811, 827, 1001, 1612, 1615, 1738, 1762
BmcAI	AGTACT	1 cut(s)	1552
Bme1390I	CCNGG	4 cut(s)	702, 929, 1509, 2498
Bme18I	GGWCC	1 cut(s)	2381
BmeT110I	CYCGRG	1 cut(s)	244
BmgT120I	GGNCC	4 cut(s)	697, 698, 762, 2381
BmiI	GGNNCC	3 cut(s)	26, 699, 700
BmrFI	CCNGG	4 cut(s)	702, 929, 1509, 2498
BmrI	ACTGGG	2 cut(s)	1461, 2370
BmuI	ACTGGG	2 cut(s)	1461, 2370
BpiI	GAAGAC	1 cut(s)	2718
BpmI	CTGGAG	1 cut(s)	1152
Bpu1102I	GCTNAGC	1 cut(s)	2549
BpuEI	CTTGAG	5 cut(s)	395, 888, 1805, 1916, 1950
BpuMI	CCSGG	2 cut(s)	702, 929
Bsa29I	ATCGAT	1 cut(s)	213
BsaAI	YACGTR	1 cut(s)	2306
BsaBI	GATNNNNATC	4 cut(s)	459, 558, 1632, 2505
BsaI	GGTCTC	1 cut(s)	860
BsaJI	CCNNGG	6 cut(s)	37, 134, 683, 700, 2496, 2601
BsaWI	WCCGGW	2 cut(s)	310, 1472
Bsc4I	CCNNNNNNNGG	4 cut(s)	77, 284, 934, 2219
Bse1I	ACTGG	6 cut(s)	813, 856, 1456, 1524, 1950, 2376
Bse3DI	GCAATG	4 cut(s)	1252, 1363, 1426, 2744
Bse8I	GATNNNNATC	4 cut(s)	459, 558, 1632, 2505
BseAI	TCCGGA	1 cut(s)	310
BseBI	CCWGG	2 cut(s)	1509, 2498
BseCI	ATCGAT	1 cut(s)	213
BseDI	CCNNGG	6 cut(s)	37, 134, 683, 700, 2496, 2601
BseGI	GGATG	9 cut(s)	67, 364, 619, 793, 1093, 1270, 1333, 1801, 2365
BseJI	GATNNNNATC	4 cut(s)	459, 558, 1632, 2505
BseLI	CCNNNNNNNGG	4 cut(s)	77, 284, 934, 2219
BseMI	GCAATG	4 cut(s)	1252, 1363, 1426, 2744
BseMII	CTCAG	7 cut(s)	504, 654, 1197, 1974, 2019, 2288, 2563
BseNI	ACTGG	6 cut(s)	813, 856, 1456, 1524, 1950, 2376
BseRI	GAGGAG	2 cut(s)	749, 1940
BseSI	GKGCMC	2 cut(s)	701, 2305
BseXI	GCAGC	8 cut(s)	118, 821, 837, 986, 1597, 1600, 1747, 1748
BseYI	CCCAGC	1 cut(s)	1018
Bsh1236I	CGCG	1 cut(s)	2427
BshFI	GGCC	6 cut(s)	342, 699, 764, 893, 2061, 2615
BshVI	ATCGAT	1 cut(s)	213
BsiHKAI	GWGCWC	4 cut(s)	1902, 2305, 2446, 2550
BsiHKCI	CYCGRG	1 cut(s)	244
BsiSI	CCGG	4 cut(s)	311, 702, 929, 1473
BslFI	GGGAC	3 cut(s)	130, 1456, 1972
BslI	CCNNNNNNNGG	4 cut(s)	77, 284, 934, 2219
BsmAI	GTCTC	7 cut(s)	391, 540, 704, 860, 1077, 1170, 1442
BsmBI	CGTCTC	1 cut(s)	540
BsmFI	GGGAC	3 cut(s)	130, 1456, 1972
BsmI	GAATGC	6 cut(s)	352, 661, 760, 828, 1487, 2149
BsnI	GGCC	6 cut(s)	342, 699, 764, 893, 2061, 2615
Bso31I	GGTCTC	1 cut(s)	860
BsoBI	CYCGRG	1 cut(s)	244
Bsp120I	GGGCCC	1 cut(s)	697
Bsp1286I	GDGCHC	5 cut(s)	701, 1902, 2305, 2446, 2550
Bsp13I	TCCGGA	1 cut(s)	310
Bsp143I	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
Bsp1720I	GCTNAGC	1 cut(s)	2549
Bsp68I	TCGCGA	1 cut(s)	2427
BspACI	CCGC	8 cut(s)	78, 179, 446, 765, 1341, 1592, 2447, 2519
BspANI	GGCC	6 cut(s)	342, 699, 764, 893, 2061, 2615
BspCNI	CTCAG	7 cut(s)	505, 653, 1198, 1975, 2020, 2289, 2562
BspDI	ATCGAT	1 cut(s)	213
BspEI	TCCGGA	1 cut(s)	310
BspFNI	CGCG	1 cut(s)	2427
BspLI	GGNNCC	3 cut(s)	26, 699, 700
BspMAI	CTGCAG	1 cut(s)	1648
BspMI	ACCTGC	1 cut(s)	341
BspPI	GGATC	3 cut(s)	269, 302, 945
BspQI	GCTCTTC	1 cut(s)	2434
BspTNI	GGTCTC	1 cut(s)	860
BsrDI	GCAATG	4 cut(s)	1252, 1363, 1426, 2744
BsrI	ACTGG	6 cut(s)	813, 856, 1456, 1524, 1950, 2376
BssECI	CCNNGG	6 cut(s)	37, 134, 683, 700, 2496, 2601
BssMI	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
BssNAI	GTATAC	1 cut(s)	2652
BssSI	CACGAG	1 cut(s)	2329
BssT1I	CCWWGG	3 cut(s)	37, 134, 2601
Bst1107I	GTATAC	1 cut(s)	2652
Bst2BI	CACGAG	1 cut(s)	2329
Bst2UI	CCWGG	2 cut(s)	1509, 2498
Bst4CI	ACNGT	5 cut(s)	1071, 1397, 1572, 1833, 2292
Bst6I	CTCTTC	2 cut(s)	702, 2434
BstBAI	YACGTR	1 cut(s)	2306
BstC8I	GCNNGC	1 cut(s)	2149
BstDEI	CTNAG	7 cut(s)	513, 640, 1206, 1983, 2028, 2297, 2549
BstENI	CCTNNNNNAGG	1 cut(s)	282
BstF5I	GGATG	9 cut(s)	67, 364, 619, 793, 1093, 1270, 1333, 1801, 2365
BstFNI	CGCG	1 cut(s)	2427
BstKTI	GATC	8 cut(s)	277, 310, 463, 490, 562, 940, 1566, 1698
BstMAI	GTCTC	7 cut(s)	391, 540, 704, 860, 1077, 1170, 1442
BstMBI	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
BstMWI	GCNNNNNNNGC	8 cut(s)	302, 764, 899, 980, 1015, 1208, 1619, 1628
BstNI	CCWGG	2 cut(s)	1509, 2498
BstNSI	RCATGY	1 cut(s)	2683
BstSCI	CCNGG	4 cut(s)	700, 927, 1507, 2496
BstSFI	CTRYAG	4 cut(s)	1644, 1806, 2554, 2762
BstSLI	GKGCMC	2 cut(s)	701, 2305
BstUI	CGCG	1 cut(s)	2427
BstV1I	GCAGC	8 cut(s)	118, 821, 837, 986, 1597, 1600, 1747, 1748
BstV2I	GAAGAC	1 cut(s)	2718
BstX2I	RGATCY	2 cut(s)	937, 1563
BstXI	CCANNNNNNTGG	1 cut(s)	2633
BstYI	RGATCY	2 cut(s)	937, 1563
BstZ17I	GTATAC	1 cut(s)	2652
Bsu15I	ATCGAT	1 cut(s)	213
BsuRI	GGCC	6 cut(s)	342, 699, 764, 893, 2061, 2615
BsuTUI	ATCGAT	1 cut(s)	213
BtsCI	GGATG	9 cut(s)	67, 364, 619, 793, 1093, 1270, 1333, 1801, 2365
BtsI	GCAGTG	1 cut(s)	405
BtsIMutI	CAGTG	6 cut(s)	405, 1402, 1531, 1568, 2025, 2383
BtuMI	TCGCGA	1 cut(s)	2427
BveI	ACCTGC	1 cut(s)	341
Cac8I	GCNNGC	1 cut(s)	2149
CaiI	CAGNNNCTG	4 cut(s)	1084, 1451, 1742, 2290
Cfr13I	GGNCC	4 cut(s)	697, 698, 762, 2381
ClaI	ATCGAT	1 cut(s)	213
CseI	GACGC	1 cut(s)	1857
Csp6I	GTAC	2 cut(s)	129, 1551
CviAII	CATG	8 cut(s)	407, 620, 1603, 1637, 1725, 2450, 2680, 2724
CviQI	GTAC	2 cut(s)	129, 1551
DdeI	CTNAG	7 cut(s)	513, 640, 1206, 1983, 2028, 2297, 2549
DpnI	GATC	8 cut(s)	276, 309, 462, 489, 561, 939, 1565, 1697
DpnII	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
DraI	TTTAAA	3 cut(s)	321, 1708, 2343
EaeI	YGGCCR	3 cut(s)	340, 2059, 2613
Eam1104I	CTCTTC	2 cut(s)	702, 2434
EarI	CTCTTC	2 cut(s)	702, 2434
EciI	GGCGGA	1 cut(s)	461
Ecl136II	GAGCTC	1 cut(s)	2548
Eco130I	CCWWGG	3 cut(s)	37, 134, 2601
Eco147I	AGGCCT	1 cut(s)	893
Eco24I	GRGCYC	2 cut(s)	701, 2550
Eco31I	GGTCTC	1 cut(s)	860
Eco32I	GATATC	1 cut(s)	2282
Eco47I	GGWCC	1 cut(s)	2381
Eco53kI	GAGCTC	1 cut(s)	2548
Eco57I	CTGAAG	3 cut(s)	926, 1638, 1653
Eco72I	CACGTG	1 cut(s)	2306
Eco88I	CYCGRG	1 cut(s)	244
EcoICRI	GAGCTC	1 cut(s)	2548
EcoNI	CCTNNNNNAGG	1 cut(s)	282
EcoO109I	RGGNCCY	1 cut(s)	698
EcoRI	GAATTC	1 cut(s)	2453
EcoRII	CCWGG	2 cut(s)	1507, 2496
EcoRV	GATATC	1 cut(s)	2282
EcoT14I	CCWWGG	3 cut(s)	37, 134, 2601
EcoT22I	ATGCAT	2 cut(s)	951, 1426
EcoT38I	GRGCYC	2 cut(s)	701, 2550
ErhI	CCWWGG	3 cut(s)	37, 134, 2601
Esp3I	CGTCTC	1 cut(s)	540
FaeI	CATG	8 cut(s)	410, 623, 1606, 1640, 1728, 2453, 2683, 2727
FalI	AAGNNNNNCTT	2 cut(s)	118, 150
FaqI	GGGAC	3 cut(s)	130, 1456, 1972
FatI	CATG	8 cut(s)	406, 619, 1602, 1636, 1724, 2449, 2679, 2723
FauI	CCCGC	3 cut(s)	71, 1585, 2512
FauNDI	CATATG	1 cut(s)	228
FbaI	TGATCA	2 cut(s)	487, 1695
FblI	GTMKAC	1 cut(s)	2651
Fnu4HI	GCNGC	9 cut(s)	107, 765, 810, 826, 1000, 1611, 1614, 1737, 1761
FokI	GGATG	9 cut(s)	54, 351, 626, 800, 1100, 1277, 1340, 1808, 2372
FriOI	GRGCYC	2 cut(s)	701, 2550
Fsp4HI	GCNGC	9 cut(s)	107, 765, 810, 826, 1000, 1611, 1614, 1737, 1761
FspBI	CTAG	9 cut(s)	279, 369, 500, 795, 801, 1212, 1554, 1772, 2250
GluI	GCNGC	9 cut(s)	107, 765, 810, 826, 1000, 1611, 1614, 1737, 1761
GsaI	CCCAGC	1 cut(s)	1022
GsuI	CTGGAG	1 cut(s)	1152
HaeIII	GGCC	6 cut(s)	342, 699, 764, 893, 2061, 2615
HapII	CCGG	4 cut(s)	311, 702, 929, 1473
HgaI	GACGC	1 cut(s)	1857
Hin1II	CATG	8 cut(s)	410, 623, 1606, 1640, 1728, 2453, 2683, 2727
HincII	GTYRAC	2 cut(s)	1219, 2758
HindII	GTYRAC	2 cut(s)	1219, 2758
HindIII	AAGCTT	3 cut(s)	1659, 2335, 2367
HpaII	CCGG	4 cut(s)	311, 702, 929, 1473
HphI	GGTGA	8 cut(s)	260, 616, 716, 1478, 2173, 2388, 2618, 2648
Hpy166II	GTNNAC	8 cut(s)	46, 131, 1219, 1836, 2303, 2381, 2652, 2758
Hpy8I	GTNNAC	8 cut(s)	46, 131, 1219, 1836, 2303, 2381, 2652, 2758
HpyCH4III	ACNGT	5 cut(s)	1071, 1397, 1572, 1833, 2292
HpyCH4IV	ACGT	3 cut(s)	119, 1027, 2305
HpyF10VI	GCNNNNNNNGC	8 cut(s)	302, 764, 899, 980, 1015, 1208, 1619, 1628
HpyF3I	CTNAG	7 cut(s)	513, 640, 1206, 1983, 2028, 2297, 2549
HpySE526I	ACGT	3 cut(s)	119, 1027, 2305
Hsp92II	CATG	8 cut(s)	410, 623, 1606, 1640, 1728, 2453, 2683, 2727
Kpn2I	TCCGGA	1 cut(s)	310
Ksp22I	TGATCA	2 cut(s)	487, 1695
Kzo9I	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
LguI	GCTCTTC	1 cut(s)	2434
LmnI	GCTCC	4 cut(s)	24, 996, 1006, 1744
Lsp1109I	GCAGC	8 cut(s)	118, 821, 837, 986, 1597, 1600, 1747, 1748
MaeI	CTAG	9 cut(s)	279, 369, 500, 795, 801, 1212, 1554, 1772, 2250
MaeII	ACGT	3 cut(s)	119, 1027, 2305
MalI	GATC	8 cut(s)	276, 309, 462, 489, 561, 939, 1565, 1697
MboI	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
MflI	RGATCY	2 cut(s)	937, 1563
MhlI	GDGCHC	5 cut(s)	701, 1902, 2305, 2446, 2550
MlsI	TGGCCA	3 cut(s)	342, 2061, 2615
MluNI	TGGCCA	3 cut(s)	342, 2061, 2615
MlyI	GAGTC	2 cut(s)	1075, 1994
MmeI	TCCRAC	3 cut(s)	1162, 2200, 2714
Mox20I	TGGCCA	3 cut(s)	342, 2061, 2615
Mph1103I	ATGCAT	2 cut(s)	951, 1426
MroI	TCCGGA	1 cut(s)	310
MroXI	GAANNNNTTC	1 cut(s)	1189
MscI	TGGCCA	3 cut(s)	342, 2061, 2615
MseI	TTAA	8 cut(s)	320, 584, 690, 1437, 1707, 2268, 2342, 2718
MslI	CAYNNNNRTG	3 cut(s)	411, 1229, 2628
Msp20I	TGGCCA	3 cut(s)	342, 2061, 2615
MspA1I	CMGCKG	2 cut(s)	512, 767
MspI	CCGG	4 cut(s)	311, 702, 929, 1473
MspR9I	CCNGG	4 cut(s)	702, 929, 1509, 2498
Mva1269I	GAATGC	6 cut(s)	352, 661, 760, 828, 1487, 2149
MvaI	CCWGG	2 cut(s)	1509, 2498
MvnI	CGCG	1 cut(s)	2427
MwoI	GCNNNNNNNGC	8 cut(s)	302, 764, 899, 980, 1015, 1208, 1619, 1628
NciI	CCSGG	2 cut(s)	702, 929
NdeI	CATATG	1 cut(s)	228
NdeII	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
NlaIII	CATG	8 cut(s)	410, 623, 1606, 1640, 1728, 2453, 2683, 2727
NlaIV	GGNNCC	3 cut(s)	26, 699, 700
NruI	TCGCGA	1 cut(s)	2427
NsiI	ATGCAT	2 cut(s)	951, 1426
NspI	RCATGY	1 cut(s)	2683
OliI	CACNNNNGTG	1 cut(s)	2628
PceI	AGGCCT	1 cut(s)	893
PciI	ACATGT	1 cut(s)	2679
PciSI	GCTCTTC	1 cut(s)	2434
PctI	GAATGC	6 cut(s)	352, 661, 760, 828, 1487, 2149
PdmI	GAANNNNTTC	1 cut(s)	1189
PflMI	CCANNNNNTGG	1 cut(s)	2219
PkrI	GCNGC	9 cut(s)	108, 766, 811, 827, 1001, 1612, 1615, 1738, 1762
PleI	GAGTC	2 cut(s)	1075, 1993
PmaCI	CACGTG	1 cut(s)	2306
PmlI	CACGTG	1 cut(s)	2306
PpsI	GAGTC	2 cut(s)	1075, 1993
Ppu21I	YACGTR	1 cut(s)	2306
PscI	ACATGT	1 cut(s)	2679
PsiI	TTATAA	3 cut(s)	263, 1679, 2591
Psp124BI	GAGCTC	1 cut(s)	2550
Psp6I	CCWGG	2 cut(s)	1507, 2496
PspCI	CACGTG	1 cut(s)	2306
PspFI	CCCAGC	1 cut(s)	1018
PspGI	CCWGG	2 cut(s)	1507, 2496
PspN4I	GGNNCC	3 cut(s)	26, 699, 700
PspOMI	GGGCCC	1 cut(s)	697
PspPI	GGNCC	4 cut(s)	697, 698, 762, 2381
PsrI	GAACNNNNNNTAC	2 cut(s)	1504, 1536
PstI	CTGCAG	1 cut(s)	1648
PstNI	CAGNNNCTG	4 cut(s)	1084, 1451, 1742, 2290
PsuI	RGATCY	2 cut(s)	937, 1563
PvuII	CAGCTG	1 cut(s)	512
RruI	TCGCGA	1 cut(s)	2427
RsaI	GTAC	2 cut(s)	130, 1552
RsaNI	GTAC	2 cut(s)	129, 1551
RseI	CAYNNNNRTG	3 cut(s)	411, 1229, 2628
SacI	GAGCTC	1 cut(s)	2550
SapI	GCTCTTC	1 cut(s)	2434
SaqAI	TTAA	8 cut(s)	320, 584, 690, 1437, 1707, 2268, 2342, 2718
SatI	GCNGC	9 cut(s)	107, 765, 810, 826, 1000, 1611, 1614, 1737, 1761
Sau3AI	GATC	8 cut(s)	274, 307, 460, 487, 559, 937, 1563, 1695
Sau96I	GGNCC	4 cut(s)	697, 698, 762, 2381
ScaI	AGTACT	1 cut(s)	1552
SchI	GAGTC	2 cut(s)	1075, 1994
ScrFI	CCNGG	4 cut(s)	702, 929, 1509, 2498
SduI	GDGCHC	5 cut(s)	701, 1902, 2305, 2446, 2550
SfcI	CTRYAG	4 cut(s)	1644, 1806, 2554, 2762
SinI	GGWCC	1 cut(s)	2381
SmiMI	CAYNNNNRTG	3 cut(s)	411, 1229, 2628
SmlI	CTYRAG	5 cut(s)	374, 903, 1784, 1895, 1965
SmoI	CTYRAG	5 cut(s)	374, 903, 1784, 1895, 1965
SpeI	ACTAGT	1 cut(s)	800
SseBI	AGGCCT	1 cut(s)	893
SsiI	CCGC	8 cut(s)	78, 179, 446, 765, 1341, 1592, 2447, 2519
SspI	AATATT	1 cut(s)	2017
SspMI	CTAG	9 cut(s)	279, 369, 500, 795, 801, 1212, 1554, 1772, 2250
SstI	GAGCTC	1 cut(s)	2550
StuI	AGGCCT	1 cut(s)	893
StyD4I	CCNGG	4 cut(s)	700, 927, 1507, 2496
StyI	CCWWGG	3 cut(s)	37, 134, 2601
TaaI	ACNGT	5 cut(s)	1071, 1397, 1572, 1833, 2292
TaiI	ACGT	3 cut(s)	122, 1030, 2308
TaqI	TCGA	4 cut(s)	213, 538, 1101, 2115
TatI	WGTACW	2 cut(s)	128, 1550
TauI	GCSGC	1 cut(s)	767
Tru1I	TTAA	8 cut(s)	320, 584, 690, 1437, 1707, 2268, 2342, 2718
Tru9I	TTAA	8 cut(s)	320, 584, 690, 1437, 1707, 2268, 2342, 2718
TscAI	CASTG	6 cut(s)	405, 1402, 1531, 1575, 2032, 2383
TseI	GCWGC	8 cut(s)	106, 809, 825, 999, 1610, 1613, 1736, 1760
TspGWI	ACGGA	1 cut(s)	1384
TspRI	CASTG	6 cut(s)	405, 1402, 1531, 1575, 2032, 2383
Van91I	CCANNNNNTGG	1 cut(s)	2219
VneI	GTGCAC	1 cut(s)	2301
VpaK11BI	GGWCC	1 cut(s)	2381
XagI	CCTNNNNNAGG	1 cut(s)	282
XapI	RAATTY	6 cut(s)	155, 476, 664, 1335, 1931, 2453
XbaI	TCTAGA	2 cut(s)	499, 1771
XceI	RCATGY	1 cut(s)	2683
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2608, 2630
XmiI	GTMKAC	1 cut(s)	2651
XmnI	GAANNNNTTC	1 cut(s)	1189
XspI	CTAG	9 cut(s)	279, 369, 500, 795, 801, 1212, 1554, 1772, 2250
ZrmI	AGTACT	1 cut(s)	1552
Zsp2I	ATGCAT	2 cut(s)	951, 1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.