Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0008420

Physical Location & Seq

Genomic Coordinates Forward (+)

24323768 .. 24329367

Gene Structure 5600 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G246600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGAATGTGGTTGTCAAAGTTGGGAGCTTGATATCCCAAGGTGTTTACTCTGTTGCCACTCCTTTTCATCCCTTTGGTGGGGCTGTTGATGTCATTGTTGTTCAGCAGCAGGATGGGACATTTCGAAGCACGCCTTGGTACGTCCGGTTCGGTAAATTTCAGGGTGTTCTTAAAGGTGCAGAGAAGATGGTCCGCATAAATGTAAATGGAGTTGATGCCAATTTCCATATGTATCTTGATAACTCAGGAGAGGCTTATTTTGTAAAGGAGGTTGATTCTGGTAAAGGAAGTGAGACAAATGGGGTTGTGAAGGATTCTGTTACTTTAGAACCTACACAAGAGGAAAGTGGTTTGGAGATTGATAACCAGAATAATGGTAATGAAAACGTTCTTGAAATTCGTAGACTGGAGCATAGTGTCTCTGATTCGATGGTGGTTCAGTTGCGAGATGAACGCAATTCCTTAGGTGCAAACCTGATACAGAGGGCAGAATCTGATTCTGATCGGAGGTATTACGAATATAAAGATGAGCAATCTTCTCTAGAGGGTTCCGTTGAGTTATCAGAGTATGGATCAAGTCGATATGATAATTTAGACAGTAATCATATTGTGGAATCACAGAATTTAAACTCAGAAGTTATATTGGTGAGTGTGGATGGTCATGTATTGACAGCCCCCATTTCAGCATCAGAGCTTAGCACAGAGGATGTGCAAGACACACCTCGATTCAATCTTGGCCCAGGTGAAGAGACCGACTTCTGTGAAGGCAATGAGGAGTTTAGTTCAGGTGAAACTGCTTGGGCTGCTGATTATATTTGTAAGCTGAATGAATCTACAACTAACGCATCTGGTAATGTTTGTGGAGTTCAGAATGAAGATAATGTTATTTGCCGTCAGCTGGAAGTTGATGAAGGAGGCAGGGGACTTGCATGTCAAGCTCAAGAAACTCAAAAGACTTCAAGACAGGAAAGAGATCTTCAGATGCATAGGGATTCAGAAGATGCATCTACTAACAAGGCAGACGTTTTCAAGAGCTGTTTGGGGCTAGAAGAAATGGCCAAACGTGGTGGGAAAGCTGATGTTGAAGATATGGGGTCCTCATTGGAGGTTCAAAATTCACCAGAAAAATCTAATCAGACTCTTCCGGATCCGGTGGTTGATAGAACTGAAGATGCTAGTGTTATTGAATTGAGAAATGACAATGAGTTATCTGCTTCTTGTGGTTCTGTTTCACCTGGCAACAATATGTCTCCACGTGTACAAGTTGGAAGTGAATCAGTTGAGAAGATTGTGTCTTCTTTGGAACAAATGAGTATTGAAAGCATTTCTGTACATTCTGTCAGTAATGATCCAGACTGGAAGGATGAACAGTGTGTTACATCAGCAGCAGTCGATGAGACAGAGAGTAGTCAACAAATACCTGCAACTGGAGATGAATGCAGTAAAAATGAGCTAATAGAACCCCCAACAGAATCTTCAAGTGAAGAAACACAAGTCCATTCAAGCATAAGGTTTGAGATCTCACTCTGTGGAAATGAACTTCGTGTGGGTATGGGTGTCAAAGCTGCTGCTGAAGCCTTTGCTGCACGCCGTGTATCTGCACAGGATTTCATAACTTCTGCAACATCGATTTTGAAAAATGAAAATCTGATTATCAGATATAGGGAAAGATACTTTTTGTGGGAAAAAGCAGCTCCTGTTGTTCTTGGAATGGCTGCATTTGATCTAGATTTACCTGTTGCGCCCGAGGATGCAATTCCTGTGGAACAAGATGGCTCAGAAAAACCCAGGGATGAGGATTCAGGAATGCCTTCCACTCCTACTGGACGCAGATGGAGGCTCTGGCCTATTCCATTTAGAAGGGTGAAAACACTTGAGCACACCAGCAGTAATTCATCGAATGAGGATGAATTTGTTGATTCTGAATCTGGTCTGCAAAACTCACAACTTGAAGCAACTCCTGAGTCCCCCCAAAAGCAATTTGTAAGGACAAATGTTCCCACCAACGAGCAGATAGCATCTTTAAATCTCAAAGAAGGTCAAAATATGATAACTTTCAGTTTCTCTACCAGGGTTTGGGGGACACAACAGGTTGATGCACATATTTACTTGTGGAAATGGAATGCCAGAATTGTAATTTCTGATGTTGACGGAACTATTACCAAGTCTGACGTGTTAGGCCAGTTCATGCCATTAGTTGGAAAAGATTGGACGCAATCTGGTGTGGCTAGACTTTTCTGTGCAATTAAGGAAAATGGATATCAGCTACTGTTTTTGAGTGCACGTGCAATTGTACAGGCATATCTAACGAGAAGCTTTTTAGTCAACCTAAAACAGGATGGAAAAGCTTTACCCAATGGACCTGTTGTTATATCACCCGATGGATTATTTCCTTCATTGTATCGTGAAGTTGTAAGAAGAGCACCACACGAATTCAAAATTGCCTGTTTAGAGGACATAAAAAAGCTCTTCCCCTCTGATTACAACCCATTCTATGCGGGTTTTGGAAATAGAGACACAGATGAGCTCAGCTACAGGAAAATTGGGATTCCAAAGGGCAAAATATTCATAATCAATCCCAAGGGAGAGGTGGCCATCAGCCATCATCGCGCTGATGTGAAGACGTACACTTCCTTACACACTCTCGTCAACGACATGTTTCCTCCAACTTCACTGGTTGAGCAGGAAGACTTCAACTCGTGGAACTATTGGAAAGTGCCACTGCCAGACATTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000322 GO:0000325 GO:0000326 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0006810 GO:0006886 GO:0006950 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009267 GO:0009605 GO:0009705 GO:0009987 GO:0009991 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016036 GO:0019374 GO:0019375 GO:0019637 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032586 GO:0033036 GO:0033554 GO:0034613 GO:0042594 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046467 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0070727 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0090407 GO:0098588 GO:0098791 GO:0098805 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

913

Amino Acids

101.12

Weight (kDa)

4.67

Isoelectric Point (pI)

45.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09560 AT3G09560 AT3G09560 AT3G09560 AT5G42870
fragaria_vesca	FvH4_6g14720
malus_domestica	MD04G1116800.v1.1 MD12G1132500.v1.1
prunus_persica	Prupe.6G246600_v2.0.a1 Prupe.6G246600_v2.0.a1
pyrus_communis	pycom04g10670 pycom12g12830
rosa_chinensis	RchiOBHm_Chr3g0467941
rosa_laevigata	RLG00000024465
rosa_multiflora	Rmu_sc0001793.1_g000056 Rmu_sc0006017.1_g000005
rosa_roxburghii	Rroxscaffold_6G00413270
rosa_rugosa	Rorug03G0090600
rosa_samantha	Rh3AG139100 Rh3BG160700 Rh3CG160600 Rh3DG161200
rosa_wichuraiana	Rw3G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	930
Acc36I	ACCTGC	1 cut(s)	1429
AccB7I	CCANNNNNTGG	2 cut(s)	2076, 2198
AccI	GTMKAC	1 cut(s)	403
AccII	CGCG	1 cut(s)	2610
AccIII	TCCGGA	1 cut(s)	1144
AciI	CCGC	2 cut(s)	193, 2498
AclI	AACGTT	1 cut(s)	387
AclWI	GGATC	4 cut(s)	580, 1142, 1155, 1343
AcoI	YGGCCR	2 cut(s)	1056, 2592
AcsI	RAATTY	6 cut(s)	155, 396, 622, 1114, 1910, 2432
AcuI	CTGAAG	3 cut(s)	962, 1188, 1593
AcvI	CACGTG	2 cut(s)	1256, 2285
AdeI	CACNNNGTG	2 cut(s)	1529, 1592
AfaI	GTAC	5 cut(s)	140, 1260, 1332, 2295, 2627
AfiI	CCNNNNNNNGG	7 cut(s)	77, 78, 898, 1427, 2076, 2198, 2335
AflIII	ACRYGT	3 cut(s)	1255, 2172, 2655
AjiI	CACGTC	1 cut(s)	2173
AjnI	CCWGG	4 cut(s)	739, 1234, 1787, 2069
AjuI	GAANNNNNNNTTGG	4 cut(s)	118, 150, 1459, 1491
Alw21I	GWGCWC	4 cut(s)	1881, 2284, 2425, 2529
Alw26I	GTCTC	6 cut(s)	287, 424, 743, 1254, 1391, 2508
Alw44I	GTGCAC	1 cut(s)	2280
AlwI	GGATC	4 cut(s)	580, 1142, 1155, 1343
AlwNI	CAGNNNCTG	3 cut(s)	494, 1697, 2269
Ama87I	CYCGRG	1 cut(s)	1745
Aor13HI	TCCGGA	1 cut(s)	1144
AoxI	GGCC	5 cut(s)	736, 1056, 1844, 2179, 2592
ApaLI	GTGCAC	1 cut(s)	2280
ApeKI	GCWGC	8 cut(s)	106, 803, 1385, 1565, 1568, 1583, 1691, 1715
ApoI	RAATTY	6 cut(s)	155, 396, 622, 1114, 1910, 2432
Asp700I	GAANNNNTTC	2 cut(s)	387, 1810
AspLEI	GCGC	2 cut(s)	1744, 2612
AspS9I	GGNCC	4 cut(s)	190, 737, 1095, 2360
AsuHPI	GGTGA	7 cut(s)	658, 755, 800, 1110, 1224, 1876, 2367
AsuII	TTCGAA	1 cut(s)	124
AvaI	CYCGRG	1 cut(s)	1745
AvaII	GGWCC	3 cut(s)	190, 1095, 2360
AxyI	CCTNAGG	1 cut(s)	463
BaeGI	GKGCMC	1 cut(s)	2284
BalI	TGGCCA	2 cut(s)	1058, 2594
BamHI	GGATCC	1 cut(s)	1147
BanII	GRGCYC	1 cut(s)	2529
BauI	CACGAG	1 cut(s)	2698
BbrPI	CACGTG	2 cut(s)	1256, 2285
BbsI	GAAGAC	3 cut(s)	1287, 2627, 2694
Bbv12I	GWGCWC	4 cut(s)	1881, 2284, 2425, 2529
BbvI	GCAGC	8 cut(s)	118, 790, 1397, 1552, 1555, 1570, 1702, 1703
BceAI	ACGGC	2 cut(s)	876, 1575
BciT130I	CCWGG	4 cut(s)	741, 1236, 1789, 2071
BcoDI	GTCTC	6 cut(s)	287, 424, 743, 1254, 1391, 2508
BfaI	CTAG	5 cut(s)	542, 1046, 1176, 1727, 2229
BfmI	CTRYAG	1 cut(s)	2533
BfuAI	ACCTGC	1 cut(s)	1429
BglII	AGATCT	2 cut(s)	973, 1518
BisI	GCNGC	8 cut(s)	107, 804, 1386, 1566, 1569, 1584, 1692, 1716
BlpI	GCTNAGC	2 cut(s)	695, 2528
BlsI	GCNGC	8 cut(s)	108, 805, 1387, 1567, 1570, 1585, 1693, 1717
Bme1390I	CCNGG	4 cut(s)	741, 1236, 1789, 2071
Bme18I	GGWCC	3 cut(s)	190, 1095, 2360
BmeT110I	CYCGRG	1 cut(s)	1745
BmgBI	CACGTC	1 cut(s)	2173
BmgT120I	GGNCC	4 cut(s)	190, 737, 1095, 2360
BmiI	GGNNCC	3 cut(s)	550, 1096, 1149
BmrFI	CCNGG	4 cut(s)	741, 1236, 1789, 2071
BpiI	GAAGAC	3 cut(s)	1287, 2627, 2694
BpmI	CTGGAG	2 cut(s)	428, 1449
Bpu1102I	GCTNAGC	2 cut(s)	695, 2528
Bpu14I	TTCGAA	1 cut(s)	124
BpuEI	CTTGAG	2 cut(s)	924, 1895
Bsa29I	ATCGAT	1 cut(s)	1628
BsaAI	YACGTR	2 cut(s)	1256, 2285
BsaBI	GATNNNNATC	1 cut(s)	501
BsaI	GGTCTC	1 cut(s)	743
BsaJI	CCNNGG	8 cut(s)	37, 134, 739, 1746, 1787, 1788, 2070, 2580
BsaWI	WCCGGW	3 cut(s)	144, 1144, 1150
Bsc4I	CCNNNNNNNGG	7 cut(s)	77, 78, 898, 1427, 2076, 2198, 2335
Bse1I	ACTGG	6 cut(s)	411, 1361, 1432, 1828, 2182, 2679
Bse21I	CCTNAGG	1 cut(s)	463
Bse3DI	GCAATG	1 cut(s)	775
Bse8I	GATNNNNATC	1 cut(s)	501
BseAI	TCCGGA	1 cut(s)	1144
BseBI	CCWGG	4 cut(s)	741, 1236, 1789, 2071
BseCI	ATCGAT	1 cut(s)	1628
BseDI	CCNNGG	8 cut(s)	37, 134, 739, 1746, 1787, 1788, 2070, 2580
BseGI	GGATG	9 cut(s)	67, 118, 661, 712, 1369, 1756, 1798, 1912, 2344
BseJI	GATNNNNATC	1 cut(s)	501
BseLI	CCNNNNNNNGG	7 cut(s)	77, 78, 898, 1427, 2076, 2198, 2335
BseMI	GCAATG	1 cut(s)	775
BseMII	CTCAG	5 cut(s)	258, 645, 1791, 1953, 2542
BseNI	ACTGG	6 cut(s)	411, 1361, 1432, 1828, 2182, 2679
BseRI	GAGGAG	1 cut(s)	788
BseSI	GKGCMC	1 cut(s)	2284
BseXI	GCAGC	8 cut(s)	118, 790, 1397, 1552, 1555, 1570, 1702, 1703
BsgI	GTGCAG	3 cut(s)	198, 1569, 1584
Bsh1236I	CGCG	1 cut(s)	2610
BshFI	GGCC	5 cut(s)	738, 1058, 1846, 2181, 2594
BshVI	ATCGAT	1 cut(s)	1628
BsiHKAI	GWGCWC	4 cut(s)	1881, 2284, 2425, 2529
BsiHKCI	CYCGRG	1 cut(s)	1745
BsiSI	CCGG	3 cut(s)	145, 1145, 1151
BslFI	GGGAC	4 cut(s)	130, 936, 1951, 2095
BslI	CCNNNNNNNGG	7 cut(s)	77, 78, 898, 1427, 2076, 2198, 2335
BsmAI	GTCTC	6 cut(s)	287, 424, 743, 1254, 1391, 2508
BsmFI	GGGAC	4 cut(s)	130, 936, 1951, 2095
BsmI	GAATGC	3 cut(s)	1442, 1812, 2128
BsnI	GGCC	5 cut(s)	738, 1058, 1846, 2181, 2594
Bso31I	GGTCTC	1 cut(s)	743
BsoBI	CYCGRG	1 cut(s)	1745
Bsp119I	TTCGAA	1 cut(s)	124
Bsp1286I	GDGCHC	4 cut(s)	1881, 2284, 2425, 2529
Bsp13I	TCCGGA	1 cut(s)	1144
Bsp1407I	TGTACA	3 cut(s)	1258, 1330, 2293
Bsp143I	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
Bsp1720I	GCTNAGC	2 cut(s)	695, 2528
BspACI	CCGC	2 cut(s)	193, 2498
BspANI	GGCC	5 cut(s)	738, 1058, 1846, 2181, 2594
BspCNI	CTCAG	5 cut(s)	257, 644, 1790, 1954, 2541
BspDI	ATCGAT	1 cut(s)	1628
BspEI	TCCGGA	1 cut(s)	1144
BspFNI	CGCG	1 cut(s)	2610
BspLI	GGNNCC	3 cut(s)	550, 1096, 1149
BspMI	ACCTGC	1 cut(s)	1429
BspPI	GGATC	4 cut(s)	580, 1142, 1155, 1343
BspQI	GCTCTTC	2 cut(s)	2413, 2474
BspT104I	TTCGAA	1 cut(s)	124
BspTNI	GGTCTC	1 cut(s)	743
BsrDI	GCAATG	1 cut(s)	775
BsrGI	TGTACA	3 cut(s)	1258, 1330, 2293
BsrI	ACTGG	6 cut(s)	411, 1361, 1432, 1828, 2182, 2679
BssECI	CCNNGG	8 cut(s)	37, 134, 739, 1746, 1787, 1788, 2070, 2580
BssMI	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
BssSI	CACGAG	1 cut(s)	2698
BssT1I	CCWWGG	3 cut(s)	37, 134, 2580
Bst2BI	CACGAG	1 cut(s)	2698
Bst2UI	CCWGG	4 cut(s)	741, 1236, 1789, 2071
Bst4CI	ACNGT	3 cut(s)	599, 1371, 2271
Bst6I	CTCTTC	4 cut(s)	741, 1146, 2413, 2474
BstAUI	TGTACA	3 cut(s)	1258, 1330, 2293
BstBAI	YACGTR	2 cut(s)	1256, 2285
BstBI	TTCGAA	1 cut(s)	124
BstC8I	GCNNGC	2 cut(s)	131, 1588
BstDEI	CTNAG	7 cut(s)	244, 463, 631, 695, 1777, 1962, 2528
BstENI	CCTNNNNNAGG	1 cut(s)	2333
BstF5I	GGATG	9 cut(s)	67, 118, 661, 712, 1369, 1756, 1798, 1912, 2344
BstFNI	CGCG	1 cut(s)	2610
BstHHI	GCGC	2 cut(s)	1744, 2612
BstKTI	GATC	7 cut(s)	505, 575, 976, 1150, 1351, 1521, 1726
BstMAI	GTCTC	6 cut(s)	287, 424, 743, 1254, 1391, 2508
BstMBI	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
BstMWI	GCNNNNNNNGC	5 cut(s)	803, 935, 1574, 1583, 2607
BstNI	CCWGG	4 cut(s)	741, 1236, 1789, 2071
BstNSI	RCATGY	2 cut(s)	933, 2659
BstSCI	CCNGG	4 cut(s)	739, 1234, 1787, 2069
BstSFI	CTRYAG	1 cut(s)	2533
BstSLI	GKGCMC	1 cut(s)	2284
BstUI	CGCG	1 cut(s)	2610
BstV1I	GCAGC	8 cut(s)	118, 790, 1397, 1552, 1555, 1570, 1702, 1703
BstV2I	GAAGAC	3 cut(s)	1287, 2627, 2694
BstX2I	RGATCY	3 cut(s)	973, 1147, 1518
BstXI	CCANNNNNNTGG	1 cut(s)	374
BstYI	RGATCY	3 cut(s)	973, 1147, 1518
Bsu15I	ATCGAT	1 cut(s)	1628
Bsu36I	CCTNAGG	1 cut(s)	463
BsuRI	GGCC	5 cut(s)	738, 1058, 1846, 2181, 2594
BsuTUI	ATCGAT	1 cut(s)	1628
BtgZI	GCGATG	1 cut(s)	2591
BtrI	CACGTC	1 cut(s)	2173
BtsCI	GGATG	9 cut(s)	67, 118, 661, 712, 1369, 1756, 1798, 1912, 2344
BtsI	GCAGTG	1 cut(s)	2720
BtsIMutI	CAGTG	3 cut(s)	1376, 2672, 2720
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	2 cut(s)	131, 1588
CaiI	CAGNNNCTG	3 cut(s)	494, 1697, 2269
CfoI	GCGC	2 cut(s)	1744, 2612
Cfr13I	GGNCC	4 cut(s)	190, 737, 1095, 2360
ClaI	ATCGAT	1 cut(s)	1628
CseI	GACGC	2 cut(s)	1836, 2221
Csp6I	GTAC	5 cut(s)	139, 1259, 1331, 2294, 2626
CspCI	CAANNNNNGTGG	4 cut(s)	1048, 1083, 1743, 1778
CviAII	CATG	4 cut(s)	662, 930, 2188, 2656
CviQI	GTAC	5 cut(s)	139, 1259, 1331, 2294, 2626
DdeI	CTNAG	7 cut(s)	244, 463, 631, 695, 1777, 1962, 2528
DpnI	GATC	7 cut(s)	504, 574, 975, 1149, 1350, 1520, 1725
DpnII	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
DraI	TTTAAA	2 cut(s)	627, 2025
DraIII	CACNNNGTG	2 cut(s)	1529, 1592
DrdI	GACNNNNNNGTC	1 cut(s)	930
DseDI	GACNNNNNNGTC	1 cut(s)	930
EaeI	YGGCCR	2 cut(s)	1056, 2592
Eam1104I	CTCTTC	4 cut(s)	741, 1146, 2413, 2474
EarI	CTCTTC	4 cut(s)	741, 1146, 2413, 2474
Ecl136II	GAGCTC	1 cut(s)	2527
Eco130I	CCWWGG	3 cut(s)	37, 134, 2580
Eco24I	GRGCYC	1 cut(s)	2529
Eco31I	GGTCTC	1 cut(s)	743
Eco32I	GATATC	2 cut(s)	33, 2261
Eco47I	GGWCC	3 cut(s)	190, 1095, 2360
Eco53kI	GAGCTC	1 cut(s)	2527
Eco57I	CTGAAG	3 cut(s)	962, 1188, 1593
Eco72I	CACGTG	2 cut(s)	1256, 2285
Eco81I	CCTNAGG	1 cut(s)	463
Eco88I	CYCGRG	1 cut(s)	1745
EcoICRI	GAGCTC	1 cut(s)	2527
EcoNI	CCTNNNNNAGG	1 cut(s)	2333
EcoO109I	RGGNCCY	1 cut(s)	1095
EcoRI	GAATTC	1 cut(s)	2432
EcoRII	CCWGG	4 cut(s)	739, 1234, 1787, 2069
EcoRV	GATATC	2 cut(s)	33, 2261
EcoT14I	CCWWGG	3 cut(s)	37, 134, 2580
EcoT22I	ATGCAT	2 cut(s)	987, 1006
EcoT38I	GRGCYC	1 cut(s)	2529
ErhI	CCWWGG	3 cut(s)	37, 134, 2580
FaeI	CATG	4 cut(s)	665, 933, 2191, 2659
FalI	AAGNNNNNCTT	2 cut(s)	118, 150
FaqI	GGGAC	4 cut(s)	130, 936, 1951, 2095
FatI	CATG	4 cut(s)	661, 929, 2187, 2655
FauI	CCCGC	1 cut(s)	2491
FauNDI	CATATG	1 cut(s)	228
FblI	GTMKAC	1 cut(s)	403
Fnu4HI	GCNGC	8 cut(s)	107, 804, 1386, 1566, 1569, 1584, 1692, 1716
FokI	GGATG	9 cut(s)	54, 125, 668, 719, 1376, 1763, 1805, 1919, 2351
FriOI	GRGCYC	1 cut(s)	2529
Fsp4HI	GCNGC	8 cut(s)	107, 804, 1386, 1566, 1569, 1584, 1692, 1716
FspBI	CTAG	5 cut(s)	542, 1046, 1176, 1727, 2229
GlaI	GCGC	2 cut(s)	1743, 2611
GluI	GCNGC	8 cut(s)	107, 804, 1386, 1566, 1569, 1584, 1692, 1716
GsuI	CTGGAG	2 cut(s)	428, 1449
HaeIII	GGCC	5 cut(s)	738, 1058, 1846, 2181, 2594
HapII	CCGG	3 cut(s)	145, 1145, 1151
HgaI	GACGC	2 cut(s)	1836, 2221
HhaI	GCGC	2 cut(s)	1744, 2612
Hin1II	CATG	4 cut(s)	665, 933, 2191, 2659
Hin6I	GCGC	2 cut(s)	1742, 2610
HinP1I	GCGC	2 cut(s)	1742, 2610
HincII	GTYRAC	4 cut(s)	1412, 2149, 2326, 2650
HindII	GTYRAC	4 cut(s)	1412, 2149, 2326, 2650
HindIII	AAGCTT	2 cut(s)	2314, 2346
HpaII	CCGG	3 cut(s)	145, 1145, 1151
HphI	GGTGA	7 cut(s)	658, 755, 800, 1110, 1224, 1876, 2367
Hpy166II	GTNNAC	9 cut(s)	46, 404, 1259, 1412, 2149, 2282, 2326, 2628, 2650
Hpy8I	GTNNAC	9 cut(s)	46, 404, 1259, 1412, 2149, 2282, 2326, 2628, 2650
HpyAV	CCTTC	8 cut(s)	304, 758, 905, 1354, 1821, 1854, 2030, 2403
HpyCH4III	ACNGT	3 cut(s)	599, 1371, 2271
HpyCH4IV	ACGT	8 cut(s)	141, 387, 1023, 1063, 1255, 2172, 2284, 2624
HpyF10VI	GCNNNNNNNGC	5 cut(s)	803, 935, 1574, 1583, 2607
HpyF3I	CTNAG	7 cut(s)	244, 463, 631, 695, 1777, 1962, 2528
HpySE526I	ACGT	8 cut(s)	141, 387, 1023, 1063, 1255, 2172, 2284, 2624
Hsp92II	CATG	4 cut(s)	665, 933, 2191, 2659
HspAI	GCGC	2 cut(s)	1742, 2610
Kpn2I	TCCGGA	1 cut(s)	1144
Kzo9I	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
LguI	GCTCTTC	2 cut(s)	2413, 2474
LmnI	GCTCC	3 cut(s)	24, 409, 1699
Lsp1109I	GCAGC	8 cut(s)	118, 790, 1397, 1552, 1555, 1570, 1702, 1703
MaeI	CTAG	5 cut(s)	542, 1046, 1176, 1727, 2229
MaeII	ACGT	8 cut(s)	141, 387, 1023, 1063, 1255, 2172, 2284, 2624
MaeIII	GTNAC	2 cut(s)	319, 1375
MalI	GATC	7 cut(s)	504, 574, 975, 1149, 1350, 1520, 1725
MboI	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
MfeI	CAATTG	1 cut(s)	2289
MflI	RGATCY	3 cut(s)	973, 1147, 1518
MhlI	GDGCHC	4 cut(s)	1881, 2284, 2425, 2529
MlsI	TGGCCA	2 cut(s)	1058, 2594
MluNI	TGGCCA	2 cut(s)	1058, 2594
MlyI	GAGTC	2 cut(s)	1132, 1973
MmeI	TCCRAC	3 cut(s)	1246, 2179, 2690
Mox20I	TGGCCA	2 cut(s)	1058, 2594
Mph1103I	ATGCAT	2 cut(s)	987, 1006
MroI	TCCGGA	1 cut(s)	1144
MroXI	GAANNNNTTC	2 cut(s)	387, 1810
MscI	TGGCCA	2 cut(s)	1058, 2594
MseI	TTAA	4 cut(s)	171, 626, 2024, 2247
Msp20I	TGGCCA	2 cut(s)	1058, 2594
MspA1I	CMGCKG	1 cut(s)	898
MspI	CCGG	3 cut(s)	145, 1145, 1151
MspR9I	CCNGG	4 cut(s)	741, 1236, 1789, 2071
MunI	CAATTG	1 cut(s)	2289
Mva1269I	GAATGC	3 cut(s)	1442, 1812, 2128
MvaI	CCWGG	4 cut(s)	741, 1236, 1789, 2071
MvnI	CGCG	1 cut(s)	2610
MwoI	GCNNNNNNNGC	5 cut(s)	803, 935, 1574, 1583, 2607
NdeI	CATATG	1 cut(s)	228
NdeII	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
NlaIII	CATG	4 cut(s)	665, 933, 2191, 2659
NlaIV	GGNNCC	3 cut(s)	550, 1096, 1149
NsiI	ATGCAT	2 cut(s)	987, 1006
NspI	RCATGY	2 cut(s)	933, 2659
NspV	TTCGAA	1 cut(s)	124
PasI	CCCWGGG	1 cut(s)	1788
PciI	ACATGT	1 cut(s)	2655
PciSI	GCTCTTC	2 cut(s)	2413, 2474
PctI	GAATGC	3 cut(s)	1442, 1812, 2128
PdmI	GAANNNNTTC	2 cut(s)	387, 1810
PflMI	CCANNNNNTGG	2 cut(s)	2076, 2198
PkrI	GCNGC	8 cut(s)	108, 805, 1387, 1567, 1570, 1585, 1693, 1717
PleI	GAGTC	2 cut(s)	1132, 1972
PmaCI	CACGTG	2 cut(s)	1256, 2285
PmlI	CACGTG	2 cut(s)	1256, 2285
PpsI	GAGTC	2 cut(s)	1132, 1972
Ppu21I	YACGTR	2 cut(s)	1256, 2285
PpuMI	RGGWCCY	1 cut(s)	1095
PscI	ACATGT	1 cut(s)	2655
Psp124BI	GAGCTC	1 cut(s)	2529
Psp1406I	AACGTT	1 cut(s)	387
Psp5II	RGGWCCY	1 cut(s)	1095
Psp6I	CCWGG	4 cut(s)	739, 1234, 1787, 2069
PspCI	CACGTG	2 cut(s)	1256, 2285
PspGI	CCWGG	4 cut(s)	739, 1234, 1787, 2069
PspN4I	GGNNCC	3 cut(s)	550, 1096, 1149
PspPI	GGNCC	4 cut(s)	190, 737, 1095, 2360
PspPPI	RGGWCCY	1 cut(s)	1095
PsrI	GAACNNNNNNTAC	2 cut(s)	131, 163
PstNI	CAGNNNCTG	3 cut(s)	494, 1697, 2269
PsuI	RGATCY	3 cut(s)	973, 1147, 1518
PvuII	CAGCTG	1 cut(s)	898
RsaI	GTAC	5 cut(s)	140, 1260, 1332, 2295, 2627
RsaNI	GTAC	5 cut(s)	139, 1259, 1331, 2294, 2626
SacI	GAGCTC	1 cut(s)	2529
SapI	GCTCTTC	2 cut(s)	2413, 2474
SaqAI	TTAA	4 cut(s)	171, 626, 2024, 2247
SatI	GCNGC	8 cut(s)	107, 804, 1386, 1566, 1569, 1584, 1692, 1716
Sau3AI	GATC	7 cut(s)	502, 572, 973, 1147, 1348, 1518, 1723
Sau96I	GGNCC	4 cut(s)	190, 737, 1095, 2360
SchI	GAGTC	2 cut(s)	1132, 1973
ScrFI	CCNGG	4 cut(s)	741, 1236, 1789, 2071
SduI	GDGCHC	4 cut(s)	1881, 2284, 2425, 2529
SfcI	CTRYAG	1 cut(s)	2533
SfuI	TTCGAA	1 cut(s)	124
SinI	GGWCC	3 cut(s)	190, 1095, 2360
SmlI	CTYRAG	2 cut(s)	939, 1874
SmoI	CTYRAG	2 cut(s)	939, 1874
SsiI	CCGC	2 cut(s)	193, 2498
SspI	AATATT	1 cut(s)	2565
SspMI	CTAG	5 cut(s)	542, 1046, 1176, 1727, 2229
SstI	GAGCTC	1 cut(s)	2529
StyD4I	CCNGG	4 cut(s)	739, 1234, 1787, 2069
StyI	CCWWGG	3 cut(s)	37, 134, 2580
TaaI	ACNGT	3 cut(s)	599, 1371, 2271
TaiI	ACGT	8 cut(s)	144, 390, 1026, 1066, 1258, 2175, 2287, 2627
TaqI	TCGA	7 cut(s)	124, 428, 580, 724, 1392, 1628, 1898
TaqII	GACCGA	1 cut(s)	767
TatI	WGTACW	3 cut(s)	1258, 1330, 2293
Tru1I	TTAA	4 cut(s)	171, 626, 2024, 2247
Tru9I	TTAA	4 cut(s)	171, 626, 2024, 2247
TscAI	CASTG	3 cut(s)	1376, 2679, 2727
TseI	GCWGC	8 cut(s)	106, 803, 1385, 1565, 1568, 1583, 1691, 1715
TspGWI	ACGGA	2 cut(s)	541, 2166
TspRI	CASTG	3 cut(s)	1376, 2679, 2727
Van91I	CCANNNNNTGG	2 cut(s)	2076, 2198
VneI	GTGCAC	1 cut(s)	2280
VpaK11BI	GGWCC	3 cut(s)	190, 1095, 2360
XagI	CCTNNNNNAGG	1 cut(s)	2333
XapI	RAATTY	6 cut(s)	155, 396, 622, 1114, 1910, 2432
XbaI	TCTAGA	2 cut(s)	541, 1726
XceI	RCATGY	2 cut(s)	933, 2659
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2587
XmiI	GTMKAC	1 cut(s)	403
XmnI	GAANNNNTTC	2 cut(s)	387, 1810
XspI	CTAG	5 cut(s)	542, 1046, 1176, 1727, 2229
Zsp2I	ATGCAT	2 cut(s)	987, 1006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.