AT3G09830

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
3016490 .. 3019103
2614 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G09830.3

Sequence Viewer

Length: 1257 bp
ATGAAGTGTTTCTTGTTCTCTGGTGGGGATAAGAGAGGGGAACAGAAGACCCCTATTTCGGTTTCATTGACCTCTATCTTCTCTGACCGCGAAATAAACCGAAGCGGGTCAGAGTTCAACTCTCGTGATGTCTCTGGGACGAGCACAGAATCATCCATGGGGAGGAAGAACTCGTACCCTCCGGTGTCTACTAGAGCAAGTAATCTCAGAGAGTTCAGCATTACTGATCTCAAGTCTGCAACAAAGAACTTTAGCCGATCTGTTATGATTGGAGAAGGCGGTTTCGGTTGTGTCTTCAGGGGCACAGTGAGGAACTTAGAGGACTCGTCAGTTAAAATCGAAGTCGCAGTGAAGCAGCTCGGTAAAAGAGGGTTGCAGGGGCATAAGGAATGGGTTACGGAAGTGAACTTCCTCGGAATAGTTGAGCATACAAACTTGGTGAAATTGCTTGGCTATTGTGCAGAAGATGATGAACGTGGAATCCAACGGCTTTTGGTTTATGAATACATGCCTAACCGAAGTGTTGAATTCCACTTATCCCCTCGGTCACTCACAGTTCTTACTTGGGACCTCAGACTGAGAATCGCCCAAGATGCAGCTCGCGGATTAACATACCTGCATGAAGAAATGGAGTTTCAGATAATATTCCGCGATTTCAAGTCCTCGAACATTCTTTTGGATGAGGACTGGAAAGCAAAGCTCTCAGATTTCGGTTTGGCTCGTTTAGGTCCATCTGAAGGATTAACCCATGTTTCTACTGATGTTGTAGGTACAATGGGTTATGCAGCACCTGAATACATTCAAACCGGCCGTCTCACATCGAAAAGCGATGTGTGGGGTTATGGAGTCTTCCTCTATGAGCTTATCACTGGGAGGCGACCGGTGGACAGAAACAGACCCAAGGGAGAGCAGAAGCTTCTAGAATGGGTGAGACCTTATTTATCTGACACAAGGAAGTTCAAGCTCATATTAGATCCAAGGCTGGAAGGGAAGTACCCGATCAAATCGGTTCAAAAGCTAGCAGTTGTGGCCAACAGATGTTTGGTTAGGAACTCAAAGGCACGTCCCAAGATGAGTGAGGTTTTAGAGATGGTGAACAAAATTGTGGAAGCTTCTTCAGGAAATGGCAGCCCACAGCTAGTTCCGCTGAACAGTGTAAAAGCTTCGAGAGACGCGAGAGGAAAGAACAATGGTGGTGGCGGTGAAGGAGGTTGGTTTGGCAAGTTATGGAATCCAAAGACAATAAGAGCTTGTTGA

Protein Analysis

418

Amino Acids

46.79

Weight (kDa)

9.53

Isoelectric Point (pI)

36.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 86 - 363 1.3e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 89 - 363 1.4e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 624
AccI GTMKAC 1 cut(s) 188
AccII CGCG 4 cut(s) 90, 603, 651, 1175
AciI CCGC 7 cut(s) 88, 105, 279, 603, 649, 1145, 1200
AclWI GGATC 1 cut(s) 968
AcoI YGGCCR 2 cut(s) 808, 1029
AcsI RAATTY 1 cut(s) 527
AcuI CTGAAG 3 cut(s) 280, 756, 1101
AfaI GTAC 3 cut(s) 176, 772, 995
AfiI CCNNNNNNNGG 3 cut(s) 58, 162, 737
AgeI ACCGGT 1 cut(s) 880
AgsI TTSAA 6 cut(s) 118, 527, 658, 803, 961, 1013
AjiI CACGTC 1 cut(s) 1064
AjuI GAANNNNNNNTTGG 2 cut(s) 659, 691
AloI GAACNNNNNNTCC 2 cut(s) 465, 497
Alw21I GWGCWC 1 cut(s) 146
Alw26I GTCTC 4 cut(s) 136, 818, 925, 1164
AlwI GGATC 1 cut(s) 968
AlwNI CAGNNNCTG 1 cut(s) 791
AoxI GGCC 2 cut(s) 808, 1029
ApeKI GCWGC 4 cut(s) 355, 596, 785, 1128
ApoI RAATTY 1 cut(s) 527
ArsI GACNNNNNNTTYG 4 cut(s) 40, 72, 796, 828
AsiGI ACCGGT 1 cut(s) 880
Asp700I GAANNNNTTC 2 cut(s) 8, 798
AspS9I GGNCC 2 cut(s) 568, 728
AsuHPI GGTGA 4 cut(s) 451, 940, 1105, 1214
AsuNHI GCTAGC 1 cut(s) 1018
AvaII GGWCC 2 cut(s) 568, 728
BaeGI GKGCMC 1 cut(s) 305
BalI TGGCCA 1 cut(s) 1031
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BauI CACGAG 1 cut(s) 123
BbsI GAAGAC 3 cut(s) 53, 286, 841
Bbv12I GWGCWC 1 cut(s) 146
BbvI GCAGC 4 cut(s) 367, 608, 797, 1140
BccI CCATC 2 cut(s) 739, 1084
BceAI ACGGC 2 cut(s) 503, 795
BcoDI GTCTC 4 cut(s) 136, 818, 925, 1164
BfaI CTAG 4 cut(s) 192, 920, 1019, 1139
BfuAI ACCTGC 1 cut(s) 624
BisI GCNGC 4 cut(s) 356, 597, 786, 1129
BlsI GCNGC 4 cut(s) 357, 598, 787, 1130
Bme18I GGWCC 2 cut(s) 568, 728
BmgBI CACGTC 1 cut(s) 1064
BmgT120I GGNCC 2 cut(s) 568, 728
BmiI GGNNCC 1 cut(s) 569
BmrI ACTGGG 1 cut(s) 879
BmsI GCATC 1 cut(s) 583
BmtI GCTAGC 1 cut(s) 1022
BmuI ACTGGG 1 cut(s) 879
BpiI GAAGAC 3 cut(s) 53, 286, 841
BplI GAGNNNNNCTC 4 cut(s) 104, 136, 837, 869
BpuEI CTTGAG 1 cut(s) 215
BsaI GGTCTC 1 cut(s) 925
BsaJI CCNNGG 5 cut(s) 156, 412, 542, 900, 977
BsaWI WCCGGW 2 cut(s) 181, 880
Bsc4I CCNNNNNNNGG 3 cut(s) 58, 162, 737
Bse118I RCCGGY 2 cut(s) 806, 880
Bse1I ACTGG 2 cut(s) 692, 874
BseDI CCNNGG 5 cut(s) 156, 412, 542, 900, 977
BseGI GGATG 2 cut(s) 152, 685
BseLI CCNNNNNNNGG 3 cut(s) 58, 162, 737
BseMII CTCAG 4 cut(s) 220, 569, 586, 717
BseNI ACTGG 2 cut(s) 692, 874
BseSI GKGCMC 1 cut(s) 305
BseX3I CGGCCG 1 cut(s) 808
BseXI GCAGC 4 cut(s) 367, 608, 797, 1140
BsgI GTGCAG 1 cut(s) 480
Bsh1236I CGCG 4 cut(s) 90, 603, 651, 1175
Bsh1285I CGRYCG 2 cut(s) 811, 881
BshFI GGCC 2 cut(s) 810, 1031
BshTI ACCGGT 1 cut(s) 880
BsiEI CGRYCG 2 cut(s) 811, 881
BsiHKAI GWGCWC 1 cut(s) 146
BsiSI CCGG 3 cut(s) 182, 807, 881
BslFI GGGAC 3 cut(s) 151, 581, 1050
BslI CCNNNNNNNGG 3 cut(s) 58, 162, 737
BsmAI GTCTC 4 cut(s) 136, 818, 925, 1164
BsmBI CGTCTC 2 cut(s) 818, 1164
BsmFI GGGAC 3 cut(s) 151, 581, 1050
BsnI GGCC 2 cut(s) 810, 1031
Bso31I GGTCTC 1 cut(s) 925
Bsp1286I GDGCHC 2 cut(s) 146, 305
Bsp143I GATC 4 cut(s) 226, 257, 973, 999
Bsp19I CCATGG 1 cut(s) 156
BspACI CCGC 7 cut(s) 88, 105, 279, 603, 649, 1145, 1200
BspANI GGCC 2 cut(s) 810, 1031
BspCNI CTCAG 4 cut(s) 219, 570, 585, 716
BspFNI CGCG 4 cut(s) 90, 603, 651, 1175
BspLI GGNNCC 1 cut(s) 569
BspMI ACCTGC 1 cut(s) 624
BspOI GCTAGC 1 cut(s) 1022
BspPI GGATC 1 cut(s) 968
BspTNI GGTCTC 1 cut(s) 925
BsrFI RCCGGY 2 cut(s) 806, 880
BsrI ACTGG 2 cut(s) 692, 874
BssAI RCCGGY 2 cut(s) 806, 880
BssECI CCNNGG 5 cut(s) 156, 412, 542, 900, 977
BssMI GATC 4 cut(s) 226, 257, 973, 999
BssSI CACGAG 1 cut(s) 123
BssT1I CCWWGG 3 cut(s) 156, 900, 977
Bst2BI CACGAG 1 cut(s) 123
Bst4CI ACNGT 3 cut(s) 307, 556, 1154
BstC8I GCNNGC 2 cut(s) 601, 1020
BstDEI CTNAG 5 cut(s) 206, 316, 572, 578, 703
BstDSI CCRYGG 1 cut(s) 156
BstF5I GGATG 2 cut(s) 152, 685
BstFNI CGCG 4 cut(s) 90, 603, 651, 1175
BstKTI GATC 4 cut(s) 229, 260, 976, 1002
BstMAI GTCTC 4 cut(s) 136, 818, 925, 1164
BstMBI GATC 4 cut(s) 226, 257, 973, 999
BstMCI CGRYCG 2 cut(s) 811, 881
BstMWI GCNNNNNNNGC 3 cut(s) 593, 1028, 1144
BstNSI RCATGY 1 cut(s) 511
BstSLI GKGCMC 1 cut(s) 305
BstUI CGCG 4 cut(s) 90, 603, 651, 1175
BstV1I GCAGC 4 cut(s) 367, 608, 797, 1140
BstV2I GAAGAC 3 cut(s) 53, 286, 841
BstX2I RGATCY 1 cut(s) 973
BstYI RGATCY 1 cut(s) 973
BstZI CGGCCG 1 cut(s) 808
BsuRI GGCC 2 cut(s) 810, 1031
BtgI CCRYGG 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 843
BtrI CACGTC 1 cut(s) 1064
BtsCI GGATG 2 cut(s) 152, 685
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 4 cut(s) 312, 354, 867, 1159
BveI ACCTGC 1 cut(s) 624
Cac8I GCNNGC 2 cut(s) 601, 1020
CaiI CAGNNNCTG 1 cut(s) 791
Cfr10I RCCGGY 2 cut(s) 806, 880
Cfr13I GGNCC 2 cut(s) 568, 728
CseI GACGC 1 cut(s) 1181
Csp6I GTAC 3 cut(s) 175, 771, 994
CspAI ACCGGT 1 cut(s) 880
CspCI CAANNNNNGTGG 2 cut(s) 1177, 1212
CviAII CATG 4 cut(s) 157, 508, 620, 749
CviQI GTAC 3 cut(s) 175, 771, 994
DdeI CTNAG 5 cut(s) 206, 316, 572, 578, 703
DpnI GATC 4 cut(s) 228, 259, 975, 1001
DpnII GATC 4 cut(s) 226, 257, 973, 999
EaeI YGGCCR 2 cut(s) 808, 1029
EagI CGGCCG 1 cut(s) 808
EclXI CGGCCG 1 cut(s) 808
Eco130I CCWWGG 3 cut(s) 156, 900, 977
Eco31I GGTCTC 1 cut(s) 925
Eco47I GGWCC 2 cut(s) 568, 728
Eco52I CGGCCG 1 cut(s) 808
Eco57I CTGAAG 3 cut(s) 280, 756, 1101
EcoO109I RGGNCCY 1 cut(s) 568
EcoRI GAATTC 1 cut(s) 527
EcoT14I CCWWGG 3 cut(s) 156, 900, 977
ErhI CCWWGG 3 cut(s) 156, 900, 977
Esp3I CGTCTC 2 cut(s) 818, 1164
FaeI CATG 4 cut(s) 160, 511, 623, 752
FalI AAGNNNNNCTT 1 cut(s) 28
FaqI GGGAC 3 cut(s) 151, 581, 1050
FatI CATG 4 cut(s) 156, 507, 619, 748
FauI CCCGC 1 cut(s) 98
FblI GTMKAC 1 cut(s) 188
Fnu4HI GCNGC 4 cut(s) 356, 597, 786, 1129
FokI GGATG 2 cut(s) 139, 692
Fsp4HI GCNGC 4 cut(s) 356, 597, 786, 1129
FspBI CTAG 4 cut(s) 192, 920, 1019, 1139
GluI GCNGC 4 cut(s) 356, 597, 786, 1129
HaeIII GGCC 2 cut(s) 810, 1031
HapII CCGG 3 cut(s) 182, 807, 881
HgaI GACGC 1 cut(s) 1181
Hin1II CATG 4 cut(s) 160, 511, 623, 752
HindIII AAGCTT 3 cut(s) 914, 1110, 1161
HinfI GANTC 6 cut(s) 149, 323, 480, 582, 846, 1231
HpaII CCGG 3 cut(s) 182, 807, 881
HphI GGTGA 4 cut(s) 451, 940, 1105, 1214
Hpy166II GTNNAC 4 cut(s) 189, 406, 886, 1096
Hpy188I TCNGA 9 cut(s) 85, 112, 209, 416, 575, 639, 706, 736, 946
Hpy188III TCNNGA 4 cut(s) 125, 920, 1119, 1167
Hpy8I GTNNAC 4 cut(s) 189, 406, 886, 1096
HpyAV CCTTC 4 cut(s) 269, 731, 980, 1199
HpyCH4III ACNGT 3 cut(s) 307, 556, 1154
HpyCH4IV ACGT 2 cut(s) 475, 1063
HpyCH4V TGCA 6 cut(s) 239, 376, 461, 596, 619, 785
HpyF10VI GCNNNNNNNGC 3 cut(s) 593, 1028, 1144
HpyF3I CTNAG 5 cut(s) 206, 316, 572, 578, 703
HpySE526I ACGT 2 cut(s) 475, 1063
Hsp92II CATG 4 cut(s) 160, 511, 623, 752
Kzo9I GATC 4 cut(s) 226, 257, 973, 999
Lsp1109I GCAGC 4 cut(s) 367, 608, 797, 1140
LweI GCATC 1 cut(s) 583
MaeI CTAG 4 cut(s) 192, 920, 1019, 1139
MaeII ACGT 2 cut(s) 475, 1063
MaeIII GTNAC 2 cut(s) 394, 546
MalI GATC 4 cut(s) 228, 259, 975, 1001
MboI GATC 4 cut(s) 226, 257, 973, 999
MboII GAAGA 8 cut(s) 58, 70, 178, 286, 476, 635, 841, 1107
MflI RGATCY 1 cut(s) 973
MhlI GDGCHC 2 cut(s) 146, 305
MlsI TGGCCA 1 cut(s) 1031
MluCI AATT 3 cut(s) 443, 527, 1101
MluNI TGGCCA 1 cut(s) 1031
MlyI GAGTC 2 cut(s) 317, 855
MmeI TCCRAC 1 cut(s) 508
Mox20I TGGCCA 1 cut(s) 1031
MroXI GAANNNNTTC 2 cut(s) 8, 798
MscI TGGCCA 1 cut(s) 1031
MseI TTAA 3 cut(s) 333, 608, 743
Msp20I TGGCCA 1 cut(s) 1031
MspA1I CMGCKG 1 cut(s) 1147
MspI CCGG 3 cut(s) 182, 807, 881
MvnI CGCG 4 cut(s) 90, 603, 651, 1175
MwoI GCNNNNNNNGC 3 cut(s) 593, 1028, 1144
NcoI CCATGG 1 cut(s) 156
NdeII GATC 4 cut(s) 226, 257, 973, 999
NheI GCTAGC 1 cut(s) 1018
NlaIII CATG 4 cut(s) 160, 511, 623, 752
NlaIV GGNNCC 1 cut(s) 569
NmuCI GTSAC 1 cut(s) 546
NspI RCATGY 1 cut(s) 511
PcsI WCGNNNNNNNCGW 1 cut(s) 1172
PdmI GAANNNNTTC 2 cut(s) 8, 798
PfeI GAWTC 4 cut(s) 149, 480, 582, 1231
PinAI ACCGGT 1 cut(s) 880
PkrI GCNGC 4 cut(s) 357, 598, 787, 1130
PleI GAGTC 2 cut(s) 317, 854
PpsI GAGTC 2 cut(s) 317, 854
PpuMI RGGWCCY 1 cut(s) 568
Psp5II RGGWCCY 1 cut(s) 568
PspN4I GGNNCC 1 cut(s) 569
PspPI GGNCC 2 cut(s) 568, 728
PspPPI RGGWCCY 1 cut(s) 568
PstNI CAGNNNCTG 1 cut(s) 791
PsuI RGATCY 1 cut(s) 973
RsaI GTAC 3 cut(s) 176, 772, 995
RsaNI GTAC 3 cut(s) 175, 771, 994
SaqAI TTAA 3 cut(s) 333, 608, 743
SatI GCNGC 4 cut(s) 356, 597, 786, 1129
Sau3AI GATC 4 cut(s) 226, 257, 973, 999
Sau96I GGNCC 2 cut(s) 568, 728
SchI GAGTC 2 cut(s) 317, 855
SduI GDGCHC 2 cut(s) 146, 305
SfaNI GCATC 1 cut(s) 583
SinI GGWCC 2 cut(s) 568, 728
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
Sse9I AATT 3 cut(s) 443, 527, 1101
SsiI CCGC 7 cut(s) 88, 105, 279, 603, 649, 1145, 1200
SspI AATATT 1 cut(s) 645
SspMI CTAG 4 cut(s) 192, 920, 1019, 1139
StyI CCWWGG 3 cut(s) 156, 900, 977
TaaI ACNGT 3 cut(s) 307, 556, 1154
TaiI ACGT 2 cut(s) 478, 1066
TaqI TCGA 4 cut(s) 339, 665, 821, 1166
TaqII GACCGA 1 cut(s) 534
TasI AATT 3 cut(s) 443, 527, 1101
TfiI GAWTC 4 cut(s) 149, 480, 582, 1231
Tru1I TTAA 3 cut(s) 333, 608, 743
Tru9I TTAA 3 cut(s) 333, 608, 743
TscAI CASTG 4 cut(s) 312, 354, 874, 1159
TseFI GTSAC 1 cut(s) 546
TseI GCWGC 4 cut(s) 355, 596, 785, 1128
Tsp45I GTSAC 1 cut(s) 546
TspDTI ATGAA 5 cut(s) 17, 54, 486, 516, 636
TspGWI ACGGA 1 cut(s) 413
TspRI CASTG 4 cut(s) 312, 354, 874, 1159
VpaK11BI GGWCC 2 cut(s) 568, 728
XapI RAATTY 1 cut(s) 527
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 1 cut(s) 511
XcmI CCANNNNNNNNNTGG 1 cut(s) 1039
XmiI GTMKAC 1 cut(s) 188
XmnI GAANNNNTTC 2 cut(s) 8, 798
XspI CTAG 4 cut(s) 192, 920, 1019, 1139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.