pycom12g11460

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
13713809 .. 13716831
3023 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g11460.2

Sequence Viewer

Length: 1221 bp
ATGAAGTGCTTCCCATTTTACATTGGAGAGAAAAAGGACGAACCAAAGAGCACAAATACAACTTTTACCGATGGTGAAATGAAGAGATCTGGATCAGAGTTAGATTCCCAGAATATCTCTGATGCGAGCACAGAATCCCTGAGGAGGAACCAATATCCTAGTTTCTCTCAGAGACCCAGCAACCTCAAAGTATTCTCAGTTTTGGAGCTGAAGTCTGCCACGAAGAACTTCAGCCGCTCTGTCATGGTTGGAGAGGGTGGGTTTGGGTGTGTCTATAAGGGGCTGATTAAAAGTGAAGAAGATCCAAATAAAAAACTTGAAGTTGCTGTGAAACAGCTCAGTAAAAGAGGCTTGCAGGGGCACAAGGAATGGGTGACAGAAGTTAATGTTCTTGGGGTGGTTGAGCATCCAAACCTAGTCAAACTAGTGGGCTACTGTGCTGAGGATGATGAACGAGGAATCCAACGACTTCTAATTTATGAATACATGCCTAATGGAAGTGTAGAGAACCATTTAGCCGGCTCTGGATCTGGAATAGATCCTCTTTCATGGGCCATGAGATTGAGAATAGCACAAGATGCTGCTCGTGGCTTGACATACTTACATGAAGAAATGGAGTTTCAGATCATTTTCAGGGATTTTAAATCTTCAAATATTCTTTTGGATGATCAATGGAATGCGAAGCTGTCAGACTTTGGAATGGCTAGGTTGGGCCCGTCGGAAGGATTAACCCACGTCTCAACAGCTGTTGTTGGAACCATGGGATACGCAGCACCTGAGTACATCCAGACCGGACGTCTAACATCTAAGAATGATGTGTGGAGCTATGGGGTCTTCCTTTATGAACTAATCACAGGTAGGCGTCCTATCGATCGAAACCGCCCTAAGAGTGAGCAGAATCTCTTGGATTGGGTAAAGCCTTACCTGTCAGATGTGAAGAAGTTCCGGCTAATAATAGACCCCAAGCTTGAAGGTAAATACCCCCTCAAGTCAGCTCAAAAGCTTGCAATTGTAGCCAACAGATGCTTGGTCAAACTCCCCAAGAATCGTCCAAAGATGAGCGAGGTATTGGAAATGGTAAATCAAATTATAGAGGCCAAAAGAAAACTATGGAGGTACCCTTGGTTGGAAAGAAAAAAAGGGAGGCACCATCAAGCCAAAATAAAGTTATGGAGGCACGAAGAGGAACCGAAAGTCTGCAACTGCCCCCGAAGAATTTAG

Protein Analysis

407

Amino Acids

46.48

Weight (kDa)

9.37

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 799
Acc65I GGTACC 1 cut(s) 1116
AccB1I GGYRCC 2 cut(s) 1116, 1146
AccBSI CCGCTC 1 cut(s) 237
AciI CCGC 2 cut(s) 235, 880
AclWI GGATC 4 cut(s) 100, 296, 533, 535
AcsI RAATTY 1 cut(s) 1215
AcuI CTGAAG 2 cut(s) 214, 230
AcyI GRCGYC 2 cut(s) 796, 862
AfaI GTAC 2 cut(s) 782, 1118
AfiI CCNNNNNNNGG 3 cut(s) 144, 722, 1126
AgsI TTSAA 3 cut(s) 320, 651, 971
AhdI GACNNNNNGTC 1 cut(s) 795
AhlI ACTAGT 1 cut(s) 424
AjiI CACGTC 1 cut(s) 736
AloI GAACNNNNNNTCC 2 cut(s) 444, 476
AluBI AGCT 8 cut(s) 208, 337, 685, 746, 825, 967, 995, 1003
AluI AGCT 8 cut(s) 208, 337, 685, 746, 825, 967, 995, 1003
Alw21I GWGCWC 2 cut(s) 53, 131
Alw26I GTCTC 2 cut(s) 166, 742
AlwI GGATC 4 cut(s) 100, 296, 533, 535
AlwNI CAGNNNCTG 1 cut(s) 776
AoxI GGCC 3 cut(s) 552, 712, 1095
ApaI GGGCCC 1 cut(s) 716
ApeKI GCWGC 2 cut(s) 581, 770
ApoI RAATTY 1 cut(s) 1215
Asp700I GAANNNNTTC 3 cut(s) 8, 227, 941
Asp718I GGTACC 1 cut(s) 1116
AspS9I GGNCC 3 cut(s) 552, 712, 713
AsuHPI GGTGA 2 cut(s) 86, 385
AxyI CCTNAGG 1 cut(s) 140
BaeGI GKGCMC 2 cut(s) 363, 716
BanI GGYRCC 2 cut(s) 1116, 1146
BanII GRGCYC 1 cut(s) 716
BauI CACGAG 1 cut(s) 585
BbsI GAAGAC 1 cut(s) 826
Bbv12I GWGCWC 2 cut(s) 53, 131
BbvCI CCTCAGC 1 cut(s) 441
BbvI GCAGC 2 cut(s) 568, 782
BccI CCATC 2 cut(s) 65, 1158
BciVI GTATCC 1 cut(s) 758
BclI TGATCA 1 cut(s) 667
BcoDI GTCTC 2 cut(s) 166, 742
BcuI ACTAGT 1 cut(s) 424
BfaI CTAG 4 cut(s) 159, 416, 425, 705
BfuI GTATCC 1 cut(s) 758
BglII AGATCT 1 cut(s) 86
BisI GCNGC 3 cut(s) 235, 582, 771
BlsI GCNGC 3 cut(s) 236, 583, 772
BmeRI GACNNNNNGTC 1 cut(s) 795
BmgBI CACGTC 1 cut(s) 736
BmgT120I GGNCC 3 cut(s) 552, 712, 713
BmiI GGNNCC 6 cut(s) 149, 714, 757, 1118, 1148, 1188
BmsI GCATC 4 cut(s) 112, 415, 568, 1013
BpiI GAAGAC 1 cut(s) 826
Bpu10I CCTNAGC 1 cut(s) 441
BpuEI CTTGAG 1 cut(s) 971
Bsa29I ATCGAT 1 cut(s) 870
BsaBI GATNNNNATC 1 cut(s) 91
BsaHI GRCGYC 2 cut(s) 796, 862
BsaI GGTCTC 1 cut(s) 166
BsaJI CCNNGG 2 cut(s) 759, 1121
BsaWI WCCGGW 1 cut(s) 791
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 3 cut(s) 144, 722, 1126
Bse118I RCCGGY 1 cut(s) 518
Bse21I CCTNAGG 1 cut(s) 140
Bse8I GATNNNNATC 1 cut(s) 91
BseCI ATCGAT 1 cut(s) 870
BseDI CCNNGG 2 cut(s) 759, 1121
BseGI GGATG 4 cut(s) 406, 451, 670, 783
BseJI GATNNNNATC 1 cut(s) 91
BseLI CCNNNNNNNGG 3 cut(s) 144, 722, 1126
BseMII CTCAG 6 cut(s) 131, 182, 210, 352, 432, 768
BseRI GAGGAG 1 cut(s) 157
BseSI GKGCMC 2 cut(s) 363, 716
BseXI GCAGC 2 cut(s) 568, 782
BseYI CCCAGC 1 cut(s) 176
Bsh1285I CGRYCG 1 cut(s) 874
BshFI GGCC 3 cut(s) 554, 714, 1097
BshNI GGYRCC 2 cut(s) 1116, 1146
BshVI ATCGAT 1 cut(s) 870
BsiEI CGRYCG 1 cut(s) 874
BsiHKAI GWGCWC 2 cut(s) 53, 131
BsiSI CCGG 3 cut(s) 519, 792, 946
BslI CCNNNNNNNGG 3 cut(s) 144, 722, 1126
BsmAI GTCTC 2 cut(s) 166, 742
BsmBI CGTCTC 1 cut(s) 742
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 3 cut(s) 554, 714, 1097
Bso31I GGTCTC 1 cut(s) 166
Bsp120I GGGCCC 1 cut(s) 712
Bsp1286I GDGCHC 4 cut(s) 53, 131, 363, 716
Bsp143I GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
Bsp19I CCATGG 1 cut(s) 759
BspACI CCGC 2 cut(s) 235, 880
BspANI GGCC 3 cut(s) 554, 714, 1097
BspCNI CTCAG 6 cut(s) 132, 181, 209, 351, 433, 769
BspDI ATCGAT 1 cut(s) 870
BspLI GGNNCC 6 cut(s) 149, 714, 757, 1118, 1148, 1188
BspPI GGATC 4 cut(s) 100, 296, 533, 535
BspT107I GGYRCC 2 cut(s) 1116, 1146
BspTNI GGTCTC 1 cut(s) 166
BsrBI CCGCTC 1 cut(s) 237
BsrFI RCCGGY 1 cut(s) 518
BssAI RCCGGY 1 cut(s) 518
BssECI CCNNGG 2 cut(s) 759, 1121
BssMI GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
BssNI GRCGYC 2 cut(s) 796, 862
BssSI CACGAG 1 cut(s) 585
BssT1I CCWWGG 2 cut(s) 759, 1121
Bst2BI CACGAG 1 cut(s) 585
Bst4CI ACNGT 1 cut(s) 437
Bst6I CTCTTC 2 cut(s) 77, 1176
BstACI GRCGYC 2 cut(s) 796, 862
BstAPI GCANNNNNTGC 1 cut(s) 578
BstC8I GCNNGC 4 cut(s) 127, 353, 520, 1005
BstDEI CTNAG 8 cut(s) 140, 168, 196, 338, 441, 777, 807, 885
BstDSI CCRYGG 1 cut(s) 759
BstF5I GGATG 4 cut(s) 406, 451, 670, 783
BstKTI GATC 8 cut(s) 89, 95, 304, 530, 541, 627, 670, 874
BstMAI GTCTC 2 cut(s) 166, 742
BstMBI GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
BstMCI CGRYCG 1 cut(s) 874
BstMWI GCNNNNNNNGC 2 cut(s) 578, 1013
BstNSI RCATGY 1 cut(s) 490
BstSLI GKGCMC 2 cut(s) 363, 716
BstV1I GCAGC 2 cut(s) 568, 782
BstV2I GAAGAC 1 cut(s) 826
BstX2I RGATCY 4 cut(s) 86, 301, 527, 538
BstYI RGATCY 4 cut(s) 86, 301, 527, 538
Bsu15I ATCGAT 1 cut(s) 870
Bsu36I CCTNAGG 1 cut(s) 140
BsuI GTATCC 1 cut(s) 758
BsuRI GGCC 3 cut(s) 554, 714, 1097
BsuTUI ATCGAT 1 cut(s) 870
BtgI CCRYGG 1 cut(s) 759
BtrI CACGTC 1 cut(s) 736
BtsCI GGATG 4 cut(s) 406, 451, 670, 783
Cac8I GCNNGC 4 cut(s) 127, 353, 520, 1005
CaiI CAGNNNCTG 1 cut(s) 776
Cfr10I RCCGGY 1 cut(s) 518
Cfr13I GGNCC 3 cut(s) 552, 712, 713
ClaI ATCGAT 1 cut(s) 870
CseI GACGC 1 cut(s) 851
Csp6I GTAC 2 cut(s) 781, 1117
CviAII CATG 6 cut(s) 244, 487, 549, 556, 605, 760
CviQI GTAC 2 cut(s) 781, 1117
DdeI CTNAG 8 cut(s) 140, 168, 196, 338, 441, 777, 807, 885
DpnI GATC 8 cut(s) 88, 94, 303, 529, 540, 626, 669, 873
DpnII GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
DraI TTTAAA 1 cut(s) 643
DriI GACNNNNNGTC 1 cut(s) 795
Eam1104I CTCTTC 2 cut(s) 77, 1176
Eam1105I GACNNNNNGTC 1 cut(s) 795
EarI CTCTTC 2 cut(s) 77, 1176
Eco130I CCWWGG 2 cut(s) 759, 1121
Eco24I GRGCYC 1 cut(s) 716
Eco31I GGTCTC 1 cut(s) 166
Eco57I CTGAAG 2 cut(s) 214, 230
Eco81I CCTNAGG 1 cut(s) 140
EcoT14I CCWWGG 2 cut(s) 759, 1121
EcoT38I GRGCYC 1 cut(s) 716
ErhI CCWWGG 2 cut(s) 759, 1121
Esp3I CGTCTC 1 cut(s) 742
FaeI CATG 6 cut(s) 247, 490, 552, 559, 608, 763
FatI CATG 6 cut(s) 243, 486, 548, 555, 604, 759
FbaI TGATCA 1 cut(s) 667
Fnu4HI GCNGC 3 cut(s) 235, 582, 771
FokI GGATG 4 cut(s) 393, 458, 677, 770
FriOI GRGCYC 1 cut(s) 716
Fsp4HI GCNGC 3 cut(s) 235, 582, 771
FspBI CTAG 4 cut(s) 159, 416, 425, 705
GluI GCNGC 3 cut(s) 235, 582, 771
GsaI CCCAGC 1 cut(s) 180
HaeIII GGCC 3 cut(s) 554, 714, 1097
HapII CCGG 3 cut(s) 519, 792, 946
HgaI GACGC 1 cut(s) 851
Hin1I GRCGYC 2 cut(s) 796, 862
Hin1II CATG 6 cut(s) 247, 490, 552, 559, 608, 763
HindIII AAGCTT 2 cut(s) 965, 1001
HinfI GANTC 5 cut(s) 104, 134, 459, 898, 1045
HpaII CCGG 3 cut(s) 519, 792, 946
HphI GGTGA 2 cut(s) 86, 385
Hpy188I TCNGA 7 cut(s) 97, 121, 171, 624, 691, 721, 931
Hpy188III TCNNGA 4 cut(s) 90, 525, 531, 787
Hpy99I CGWCG 1 cut(s) 721
HpyAV CCTTC 2 cut(s) 716, 965
HpyCH4III ACNGT 1 cut(s) 437
HpyCH4IV ACGT 2 cut(s) 735, 796
HpyCH4V TGCA 3 cut(s) 355, 1007, 1200
HpyF10VI GCNNNNNNNGC 2 cut(s) 578, 1013
HpyF3I CTNAG 8 cut(s) 140, 168, 196, 338, 441, 777, 807, 885
HpySE526I ACGT 2 cut(s) 735, 796
Hsp92I GRCGYC 2 cut(s) 796, 862
Hsp92II CATG 6 cut(s) 247, 490, 552, 559, 608, 763
KpnI GGTACC 1 cut(s) 1120
KroI GCCGGC 1 cut(s) 518
KroNI GCCGGC 1 cut(s) 520
Ksp22I TGATCA 1 cut(s) 667
Kzo9I GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
LmnI GCTCC 2 cut(s) 205, 822
Lsp1109I GCAGC 2 cut(s) 568, 782
LweI GCATC 4 cut(s) 112, 415, 568, 1013
MaeI CTAG 4 cut(s) 159, 416, 425, 705
MaeII ACGT 2 cut(s) 735, 796
MaeIII GTNAC 1 cut(s) 373
MalI GATC 8 cut(s) 88, 94, 303, 529, 540, 626, 669, 873
MbiI CCGCTC 1 cut(s) 237
MboI GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
MboII GAAGA 9 cut(s) 94, 235, 308, 311, 620, 639, 826, 949, 1193
MfeI CAATTG 1 cut(s) 1008
MflI RGATCY 4 cut(s) 86, 301, 527, 538
MhlI GDGCHC 4 cut(s) 53, 131, 363, 716
MluCI AATT 4 cut(s) 474, 1008, 1086, 1215
MmeI TCCRAC 5 cut(s) 229, 487, 699, 733, 1107
MroNI GCCGGC 1 cut(s) 518
MroXI GAANNNNTTC 3 cut(s) 8, 227, 941
MseI TTAA 4 cut(s) 288, 384, 642, 728
MspA1I CMGCKG 1 cut(s) 746
MspI CCGG 3 cut(s) 519, 792, 946
MunI CAATTG 1 cut(s) 1008
Mva1269I GAATGC 1 cut(s) 682
MwoI GCNNNNNNNGC 2 cut(s) 578, 1013
NaeI GCCGGC 1 cut(s) 520
NcoI CCATGG 1 cut(s) 759
NdeII GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
NgoMIV GCCGGC 1 cut(s) 518
NlaIII CATG 6 cut(s) 247, 490, 552, 559, 608, 763
NlaIV GGNNCC 6 cut(s) 149, 714, 757, 1118, 1148, 1188
NmuCI GTSAC 1 cut(s) 373
NspI RCATGY 1 cut(s) 490
PctI GAATGC 1 cut(s) 682
PdiI GCCGGC 1 cut(s) 520
PdmI GAANNNNTTC 3 cut(s) 8, 227, 941
PfeI GAWTC 5 cut(s) 104, 134, 459, 898, 1045
PkrI GCNGC 3 cut(s) 236, 583, 772
Ple19I CGATCG 1 cut(s) 874
PspFI CCCAGC 1 cut(s) 176
PspN4I GGNNCC 6 cut(s) 149, 714, 757, 1118, 1148, 1188
PspOMI GGGCCC 1 cut(s) 712
PspPI GGNCC 3 cut(s) 552, 712, 713
PstNI CAGNNNCTG 1 cut(s) 776
PsuI RGATCY 4 cut(s) 86, 301, 527, 538
PvuI CGATCG 1 cut(s) 874
PvuII CAGCTG 1 cut(s) 746
RsaI GTAC 2 cut(s) 782, 1118
RsaNI GTAC 2 cut(s) 781, 1117
SaqAI TTAA 4 cut(s) 288, 384, 642, 728
SatI GCNGC 3 cut(s) 235, 582, 771
Sau3AI GATC 8 cut(s) 86, 92, 301, 527, 538, 624, 667, 871
Sau96I GGNCC 3 cut(s) 552, 712, 713
SduI GDGCHC 4 cut(s) 53, 131, 363, 716
SfaNI GCATC 4 cut(s) 112, 415, 568, 1013
SmlI CTYRAG 1 cut(s) 986
SmoI CTYRAG 1 cut(s) 986
SpeI ACTAGT 1 cut(s) 424
Sse9I AATT 4 cut(s) 474, 1008, 1086, 1215
SsiI CCGC 2 cut(s) 235, 880
SspI AATATT 1 cut(s) 655
SspMI CTAG 4 cut(s) 159, 416, 425, 705
StyI CCWWGG 2 cut(s) 759, 1121
TaaI ACNGT 1 cut(s) 437
TaiI ACGT 2 cut(s) 738, 799
TaqI TCGA 2 cut(s) 870, 874
TasI AATT 4 cut(s) 474, 1008, 1086, 1215
TatI WGTACW 1 cut(s) 780
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 5 cut(s) 104, 134, 459, 898, 1045
Tru1I TTAA 4 cut(s) 288, 384, 642, 728
Tru9I TTAA 4 cut(s) 288, 384, 642, 728
TseFI GTSAC 1 cut(s) 373
TseI GCWGC 2 cut(s) 581, 770
Tsp45I GTSAC 1 cut(s) 373
TspDTI ATGAA 7 cut(s) 17, 95, 465, 495, 537, 621, 858
XapI RAATTY 1 cut(s) 1215
XceI RCATGY 1 cut(s) 490
XcmI CCANNNNNNNNNTGG 1 cut(s) 1024
XmnI GAANNNNTTC 3 cut(s) 8, 227, 941
XspI CTAG 4 cut(s) 159, 416, 425, 705
ZraI GACGTC 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.