AT5G03320

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
801947 .. 804448
2502 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G03320.1

Sequence Viewer

Length: 1263 bp
ATGAAATGCTTCTTATTCCCTCTTGGGGACAAGAAAGATGAACAGAGAAGCCCTAAACCGGTTTCACCAACGTCTAACTTCAGTGACGTAAACAAAAGCGGTTCAGATTTCAGTCCCCGGGATGTTTCTGGAACGAGCACAGTATCATCCACTGGTAGGAACTCGAACACTAGCATGTCAGCTAGAGAAAACAACCTTAGAGAGTTCACTATTGGTGATCTTAAATCTGCCACAAGGAACTTCAGCAGGTCAGGTATGATCGGGGAAGGCGGTTTTGGTTGTGTCTTCTGGGGAACAATCAAGAACTTAGAAGACCCATCGAAGAAAATCGAAGTCGCGGTTAAACAGCTCGGCAAAAGAGGGTTGCAGGGTCATAAAGAATGGGTGACTGAAGTGAACTTTCTCGGTGTAGTCGAGCATTCAAACTTGGTGAAGTTGCTGGGACATTGTGCAGAAGACGATGAACGTGGAATCCAAAGGCTTTTGGTTTATGAATATATGCCAAACCAAAGTGTCGAGTTCCATTTATCTCCGCGGTCACCGACAGTACTTACTTGGGACCTCAGATTGAGAATAGCACAAGACGCAGCTCGAGGTTTAACATACCTTCATGAAGAAATGGACTTTCAGATAATATTCCGTGATTTCAAGTCATCCAACATTCTACTAGACGAGAATTGGACAGCGAAGCTTTCGGATTTCGGTTTGGCTCGCTTAGGTCCTTCACCAGGATCCAGCCATGTTTCTACTGATGTAGTAGGAACAATGGGATACGCAGCTCCAGAGTATATCCAAACGGGTCGCCTCACGTCGAAAAGCGATGTGTGGGGATACGGAGTTTTCATCTATGAGCTCATTACAGGAAGAAGGCCACTAGACCGGAACAAGCCTAAAGGAGAGCAGAAGCTTTTAGAATGGGTGAGACCTTACTTATCCGACACAAGGAGGTTCCGGCTAATAGTAGACCCGAGGCTCGAGGGAAAGTACATGATCAAGTCAGTGCAGAAACTCGCGGTTGTAGCCAACCTTTGCCTTACTAGAAACGCAAAGGCGCGTCCAAAGATGAGCGAGGTGTTAGAGATGGTGACAAAGATTGTGGAAGCTTCATCGCCTGGGAATGGTGGCAAGAAGCCGCAGCTGGTTCCACTAAAGAGTCAAGAAACTTCTAGAGTCGAGGAAGGGAAGAATAAGAAGGTTCTTGATGGTGCTGAAGGAGGTTGGTTAGAAAAGTTGTGGAACCCAAAGAATGTGAGAGCTTGTTGA

Protein Analysis

420

Amino Acids

47.01

Weight (kDa)

9.34

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 83 - 360 3.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 86 - 360 2.5e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 237
AccI GTMKAC 1 cut(s) 963
AccII CGCG 4 cut(s) 338, 535, 1013, 1054
AciI CCGC 7 cut(s) 99, 270, 338, 533, 535, 1013, 1133
AclWI GGATC 2 cut(s) 726, 739
AcuI CTGAAG 4 cut(s) 64, 226, 411, 1230
AfaI GTAC 2 cut(s) 549, 986
AfiI CCNNNNNNNGG 6 cut(s) 25, 58, 156, 728, 942, 1118
AgeI ACCGGT 1 cut(s) 58
AgsI TTSAA 2 cut(s) 423, 649
AjiI CACGTC 1 cut(s) 810
AjnI CCWGG 2 cut(s) 727, 1111
AjuI GAANNNNNNNTTGG 2 cut(s) 258, 290
AloI GAACNNNNNNTCC 2 cut(s) 456, 488
Alw21I GWGCWC 2 cut(s) 140, 855
Alw26I GTCTC 1 cut(s) 916
AlwI GGATC 2 cut(s) 726, 739
Ama87I CYCGRG 4 cut(s) 117, 591, 967, 974
AoxI GGCC 1 cut(s) 869
ApeKI GCWGC 3 cut(s) 587, 776, 1135
AsiGI ACCGGT 1 cut(s) 58
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 2 cut(s) 559, 719
AsuC2I CCSGG 2 cut(s) 118, 119
AsuHPI GGTGA 8 cut(s) 57, 227, 397, 442, 531, 717, 931, 1096
AvaI CYCGRG 4 cut(s) 117, 591, 967, 974
AvaII GGWCC 2 cut(s) 559, 719
BamHI GGATCC 1 cut(s) 731
BanII GRGCYC 1 cut(s) 855
BbsI GAAGAC 3 cut(s) 277, 318, 462
Bbv12I GWGCWC 2 cut(s) 140, 855
BbvI GCAGC 3 cut(s) 599, 788, 1147
BccI CCATC 3 cut(s) 325, 1075, 1196
BciT130I CCWGG 2 cut(s) 729, 1113
BciVI GTATCC 2 cut(s) 764, 824
BclI TGATCA 1 cut(s) 990
BcnI CCSGG 2 cut(s) 118, 119
BcoDI GTCTC 1 cut(s) 916
BfaI CTAG 6 cut(s) 171, 183, 668, 875, 1038, 1167
BfuAI ACCTGC 1 cut(s) 237
BfuI GTATCC 2 cut(s) 764, 824
BisI GCNGC 4 cut(s) 588, 777, 1133, 1136
BlsI GCNGC 4 cut(s) 589, 778, 1134, 1137
BmcAI AGTACT 1 cut(s) 549
Bme1390I CCNGG 4 cut(s) 118, 119, 729, 1113
Bme18I GGWCC 2 cut(s) 559, 719
BmeT110I CYCGRG 4 cut(s) 117, 591, 967, 974
BmgBI CACGTC 1 cut(s) 810
BmgT120I GGNCC 2 cut(s) 559, 719
BmiI GGNNCC 5 cut(s) 560, 733, 950, 1143, 1238
BmrFI CCNGG 4 cut(s) 118, 119, 729, 1113
BpiI GAAGAC 3 cut(s) 277, 318, 462
BpmI CTGGAG 1 cut(s) 765
Bpu10I CCTNAGC 1 cut(s) 715
BpuMI CCSGG 2 cut(s) 118, 119
BsaI GGTCTC 1 cut(s) 916
BsaJI CCNNGG 5 cut(s) 116, 117, 533, 968, 1112
BsaWI WCCGGW 2 cut(s) 58, 879
Bsc4I CCNNNNNNNGG 6 cut(s) 25, 58, 156, 728, 942, 1118
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 1 cut(s) 157
BseBI CCWGG 2 cut(s) 729, 1113
BseDI CCNNGG 5 cut(s) 116, 117, 533, 968, 1112
BseGI GGATG 3 cut(s) 127, 146, 653
BseLI CCNNNNNNNGG 6 cut(s) 25, 58, 156, 728, 942, 1118
BseMII CTCAG 1 cut(s) 577
BseNI ACTGG 1 cut(s) 157
BseXI GCAGC 3 cut(s) 599, 788, 1147
BseYI CCCAGC 1 cut(s) 439
BsgI GTGCAG 2 cut(s) 471, 1022
Bsh1236I CGCG 4 cut(s) 338, 535, 1013, 1054
BshFI GGCC 1 cut(s) 871
BshTI ACCGGT 1 cut(s) 58
BsiHKAI GWGCWC 2 cut(s) 140, 855
BsiHKCI CYCGRG 4 cut(s) 117, 591, 967, 974
BsiSI CCGG 4 cut(s) 59, 118, 880, 952
BslFI GGGAC 4 cut(s) 41, 99, 456, 572
BslI CCNNNNNNNGG 6 cut(s) 25, 58, 156, 728, 942, 1118
BsmAI GTCTC 1 cut(s) 916
BsmFI GGGAC 4 cut(s) 41, 99, 456, 572
BsmI GAATGC 1 cut(s) 418
BsnI GGCC 1 cut(s) 871
Bso31I GGTCTC 1 cut(s) 916
BsoBI CYCGRG 4 cut(s) 117, 591, 967, 974
Bsp1286I GDGCHC 2 cut(s) 140, 855
Bsp143I GATC 4 cut(s) 217, 258, 731, 990
BspACI CCGC 7 cut(s) 99, 270, 338, 533, 535, 1013, 1133
BspANI GGCC 1 cut(s) 871
BspCNI CTCAG 1 cut(s) 576
BspFNI CGCG 4 cut(s) 338, 535, 1013, 1054
BspHI TCATGA 1 cut(s) 610
BspLI GGNNCC 5 cut(s) 560, 733, 950, 1143, 1238
BspMI ACCTGC 1 cut(s) 237
BspPI GGATC 2 cut(s) 726, 739
BspTNI GGTCTC 1 cut(s) 916
BsrFI RCCGGY 1 cut(s) 58
BsrI ACTGG 1 cut(s) 157
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 5 cut(s) 116, 117, 533, 968, 1112
BssMI GATC 4 cut(s) 217, 258, 731, 990
Bst2UI CCWGG 2 cut(s) 729, 1113
Bst4CI ACNGT 2 cut(s) 142, 547
BstC8I GCNNGC 1 cut(s) 712
BstDEI CTNAG 4 cut(s) 197, 307, 563, 715
BstDSI CCRYGG 1 cut(s) 533
BstEII GGTNACC 1 cut(s) 537
BstENI CCTNNNNNAGG 1 cut(s) 726
BstF5I GGATG 3 cut(s) 127, 146, 653
BstFNI CGCG 4 cut(s) 338, 535, 1013, 1054
BstHHI GCGC 1 cut(s) 1054
BstKTI GATC 4 cut(s) 220, 261, 734, 993
BstMAI GTCTC 1 cut(s) 916
BstMBI GATC 4 cut(s) 217, 258, 731, 990
BstMWI GCNNNNNNNGC 2 cut(s) 584, 1019
BstNI CCWGG 2 cut(s) 729, 1113
BstNSI RCATGY 1 cut(s) 178
BstPI GGTNACC 1 cut(s) 537
BstSCI CCNGG 4 cut(s) 116, 117, 727, 1111
BstUI CGCG 4 cut(s) 338, 535, 1013, 1054
BstV1I GCAGC 3 cut(s) 599, 788, 1147
BstV2I GAAGAC 3 cut(s) 277, 318, 462
BstX2I RGATCY 1 cut(s) 731
BstYI RGATCY 1 cut(s) 731
BsuI GTATCC 2 cut(s) 764, 824
BsuRI GGCC 1 cut(s) 871
BtgI CCRYGG 1 cut(s) 533
BtgZI GCGATG 2 cut(s) 834, 1092
BtrI CACGTC 1 cut(s) 810
BtsCI GGATG 3 cut(s) 127, 146, 653
BtsIMutI CAGTG 3 cut(s) 88, 150, 1005
BveI ACCTGC 1 cut(s) 237
Cac8I GCNNGC 1 cut(s) 712
CciI TCATGA 1 cut(s) 610
CfoI GCGC 1 cut(s) 1054
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 2 cut(s) 559, 719
Cfr42I CCGCGG 1 cut(s) 536
Cfr9I CCCGGG 1 cut(s) 117
CseI GACGC 2 cut(s) 593, 1043
Csp6I GTAC 2 cut(s) 548, 985
CspAI ACCGGT 1 cut(s) 58
CspCI CAANNNNNGTGG 2 cut(s) 1077, 1112
CviAII CATG 4 cut(s) 175, 611, 740, 988
CviQI GTAC 2 cut(s) 548, 985
DdeI CTNAG 4 cut(s) 197, 307, 563, 715
DpnI GATC 4 cut(s) 219, 260, 733, 992
DpnII GATC 4 cut(s) 217, 258, 731, 990
Ecl136II GAGCTC 1 cut(s) 853
Eco24I GRGCYC 1 cut(s) 855
Eco31I GGTCTC 1 cut(s) 916
Eco47I GGWCC 2 cut(s) 559, 719
Eco53kI GAGCTC 1 cut(s) 853
Eco57I CTGAAG 4 cut(s) 64, 226, 411, 1230
Eco88I CYCGRG 4 cut(s) 117, 591, 967, 974
Eco91I GGTNACC 1 cut(s) 537
EcoICRI GAGCTC 1 cut(s) 853
EcoNI CCTNNNNNAGG 1 cut(s) 726
EcoO109I RGGNCCY 2 cut(s) 559, 719
EcoO65I GGTNACC 1 cut(s) 537
EcoRII CCWGG 2 cut(s) 727, 1111
EcoT38I GRGCYC 1 cut(s) 855
FaeI CATG 4 cut(s) 178, 614, 743, 991
FaqI GGGAC 4 cut(s) 41, 99, 456, 572
FatI CATG 4 cut(s) 174, 610, 739, 987
FbaI TGATCA 1 cut(s) 990
FblI GTMKAC 1 cut(s) 963
Fnu4HI GCNGC 4 cut(s) 588, 777, 1133, 1136
FokI GGATG 3 cut(s) 133, 134, 640
FriOI GRGCYC 1 cut(s) 855
Fsp4HI GCNGC 4 cut(s) 588, 777, 1133, 1136
FspBI CTAG 6 cut(s) 171, 183, 668, 875, 1038, 1167
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 4 cut(s) 588, 777, 1133, 1136
GsaI CCCAGC 1 cut(s) 443
GsuI CTGGAG 1 cut(s) 765
HaeIII GGCC 1 cut(s) 871
HapII CCGG 4 cut(s) 59, 118, 880, 952
HgaI GACGC 2 cut(s) 593, 1043
HhaI GCGC 1 cut(s) 1054
Hin1II CATG 4 cut(s) 178, 614, 743, 991
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HindIII AAGCTT 3 cut(s) 689, 905, 1101
HinfI GANTC 3 cut(s) 471, 1153, 1170
HpaII CCGG 4 cut(s) 59, 118, 880, 952
HphI GGTGA 8 cut(s) 57, 227, 397, 442, 531, 717, 931, 1096
Hpy166II GTNNAC 4 cut(s) 91, 207, 397, 964
Hpy188I TCNGA 5 cut(s) 106, 566, 630, 697, 937
Hpy188III TCNNGA 7 cut(s) 129, 301, 611, 782, 1157, 1167, 1199
Hpy8I GTNNAC 4 cut(s) 91, 207, 397, 964
Hpy99I CGWCG 1 cut(s) 814
HpyAV CCTTC 7 cut(s) 260, 617, 732, 861, 1172, 1186, 1205
HpyCH4III ACNGT 2 cut(s) 142, 547
HpyCH4IV ACGT 4 cut(s) 71, 87, 466, 809
HpyCH4V TGCA 3 cut(s) 367, 452, 1003
HpyF10VI GCNNNNNNNGC 2 cut(s) 584, 1019
HpyF3I CTNAG 4 cut(s) 197, 307, 563, 715
HpySE526I ACGT 4 cut(s) 71, 87, 466, 809
Hsp92II CATG 4 cut(s) 178, 614, 743, 991
HspAI GCGC 1 cut(s) 1052
Ksp22I TGATCA 1 cut(s) 990
KspI CCGCGG 1 cut(s) 536
Kzo9I GATC 4 cut(s) 217, 258, 731, 990
LmnI GCTCC 1 cut(s) 784
Lsp1109I GCAGC 3 cut(s) 599, 788, 1147
MaeI CTAG 6 cut(s) 171, 183, 668, 875, 1038, 1167
MaeII ACGT 4 cut(s) 71, 87, 466, 809
MaeIII GTNAC 4 cut(s) 83, 385, 537, 1084
MalI GATC 4 cut(s) 219, 260, 733, 992
MboI GATC 4 cut(s) 217, 258, 731, 990
MboII GAAGA 7 cut(s) 277, 323, 334, 467, 626, 876, 1195
MflI RGATCY 1 cut(s) 731
MhlI GDGCHC 2 cut(s) 140, 855
MluCI AATT 1 cut(s) 676
MlyI GAGTC 2 cut(s) 1162, 1179
MmeI TCCRAC 2 cut(s) 681, 960
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 3 cut(s) 222, 342, 599
MslI CAYNNNNRTG 1 cut(s) 173
MspA1I CMGCKG 2 cut(s) 535, 1138
MspI CCGG 4 cut(s) 59, 118, 880, 952
MspR9I CCNGG 4 cut(s) 118, 119, 729, 1113
Mva1269I GAATGC 1 cut(s) 418
MvaI CCWGG 2 cut(s) 729, 1113
MvnI CGCG 4 cut(s) 338, 535, 1013, 1054
MwoI GCNNNNNNNGC 2 cut(s) 584, 1019
NciI CCSGG 2 cut(s) 118, 119
NdeII GATC 4 cut(s) 217, 258, 731, 990
NlaIII CATG 4 cut(s) 178, 614, 743, 991
NlaIV GGNNCC 5 cut(s) 560, 733, 950, 1143, 1238
NmeAIII GCCGAG 1 cut(s) 330
NmuCI GTSAC 4 cut(s) 83, 385, 537, 1084
NspI RCATGY 1 cut(s) 178
PaeR7I CTCGAG 2 cut(s) 591, 974
PagI TCATGA 1 cut(s) 610
PcsI WCGNNNNNNNCGW 1 cut(s) 411
PctI GAATGC 1 cut(s) 418
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 1 cut(s) 471
PinAI ACCGGT 1 cut(s) 58
PkrI GCNGC 4 cut(s) 589, 778, 1134, 1137
PleI GAGTC 2 cut(s) 1161, 1178
PpsI GAGTC 2 cut(s) 1161, 1178
PpuMI RGGWCCY 2 cut(s) 559, 719
Psp124BI GAGCTC 1 cut(s) 855
Psp5II RGGWCCY 2 cut(s) 559, 719
Psp6I CCWGG 2 cut(s) 727, 1111
PspEI GGTNACC 1 cut(s) 537
PspFI CCCAGC 1 cut(s) 439
PspGI CCWGG 2 cut(s) 727, 1111
PspN4I GGNNCC 5 cut(s) 560, 733, 950, 1143, 1238
PspPI GGNCC 2 cut(s) 559, 719
PspPPI RGGWCCY 2 cut(s) 559, 719
PspXI VCTCGAGB 2 cut(s) 591, 974
PsuI RGATCY 1 cut(s) 731
PvuII CAGCTG 1 cut(s) 1138
RsaI GTAC 2 cut(s) 549, 986
RsaNI GTAC 2 cut(s) 548, 985
RseI CAYNNNNRTG 1 cut(s) 173
SacI GAGCTC 1 cut(s) 855
SacII CCGCGG 1 cut(s) 536
SaqAI TTAA 3 cut(s) 222, 342, 599
SatI GCNGC 4 cut(s) 588, 777, 1133, 1136
Sau3AI GATC 4 cut(s) 217, 258, 731, 990
Sau96I GGNCC 2 cut(s) 559, 719
ScaI AGTACT 1 cut(s) 549
SchI GAGTC 2 cut(s) 1162, 1179
ScrFI CCNGG 4 cut(s) 118, 119, 729, 1113
SduI GDGCHC 2 cut(s) 140, 855
Sfr274I CTCGAG 2 cut(s) 591, 974
Sfr303I CCGCGG 1 cut(s) 536
SgrBI CCGCGG 1 cut(s) 536
SinI GGWCC 2 cut(s) 559, 719
SlaI CTCGAG 2 cut(s) 591, 974
SmaI CCCGGG 1 cut(s) 119
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 2 cut(s) 591, 974
SmoI CTYRAG 2 cut(s) 591, 974
Sse9I AATT 1 cut(s) 676
SsiI CCGC 7 cut(s) 99, 270, 338, 533, 535, 1013, 1133
SspI AATATT 1 cut(s) 636
SspMI CTAG 6 cut(s) 171, 183, 668, 875, 1038, 1167
SstI GAGCTC 1 cut(s) 855
StyD4I CCNGG 4 cut(s) 116, 117, 727, 1111
TaaI ACNGT 2 cut(s) 142, 547
TaiI ACGT 4 cut(s) 74, 90, 469, 812
TaqI TCGA 9 cut(s) 164, 320, 330, 414, 516, 592, 812, 975, 1173
TasI AATT 1 cut(s) 676
TatI WGTACW 2 cut(s) 547, 984
TauI GCSGC 1 cut(s) 1135
TfiI GAWTC 1 cut(s) 471
Tru1I TTAA 3 cut(s) 222, 342, 599
Tru9I TTAA 3 cut(s) 222, 342, 599
TscAI CASTG 3 cut(s) 88, 157, 1005
TseFI GTSAC 4 cut(s) 83, 385, 537, 1084
TseI GCWGC 3 cut(s) 587, 776, 1135
Tsp45I GTSAC 4 cut(s) 83, 385, 537, 1084
TspDTI ATGAA 8 cut(s) 17, 54, 477, 507, 599, 627, 832, 1095
TspGWI ACGGA 2 cut(s) 629, 849
TspMI CCCGGG 1 cut(s) 117
TspRI CASTG 3 cut(s) 88, 157, 1005
VpaK11BI GGWCC 2 cut(s) 559, 719
XagI CCTNNNNNAGG 1 cut(s) 726
XbaI TCTAGA 1 cut(s) 1166
XceI RCATGY 1 cut(s) 178
XhoI CTCGAG 2 cut(s) 591, 974
XmaI CCCGGG 1 cut(s) 117
XmiI GTMKAC 1 cut(s) 963
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 6 cut(s) 171, 183, 668, 875, 1038, 1167
ZrmI AGTACT 1 cut(s) 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.