AT3G10350

Anion-transporting ATPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010871
Physical Location & Seq
Forward (+)
3208233 .. 3211294
3062 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G10350.1

Sequence Viewer

Length: 1236 bp
ATGGCGACTCTGTCTTCCTATCTGTTATCTTCTCCTCCTCTATGCAAATCCCGATTCTCGGCAACAAGTCTCGTCTCAGGAATTGATTTCATCTCTTTCTCTCCTCGAACAACTCTCTCCTCGTCATCCACTGTCTTGCCGGCGATTCTTTCTCTTTCCGTTAAACATAATCGCCGGAGAAACTCGCTTCAAGTGAAATCAGTAGCTAGCCCAACGGAGACGATTTCAGAATTCGATGAGATGGTCTCCGGCACGAAACGAAAGTATTACATGCTCGGTGGGAAAGGAGGAGTGGGCAAAACTAGTTGTGCTGCTTCTTTAGCTGTGAGATTCGCCAACAATGGACACCCAACTCTGGTTGTATCTACAGATCCAGCACATTCCTTGAGCGATTCTTTTGCTCAGGACTTGACTGGAGGAATGCTTGTCCCTGTAGAAGGACCCGAAGCTCCTTTATTTGCTTTAGAAATAAACCCTGAGAAGGCTAGGGAAGAGTTTCGTAGTGCCTCGCAGATGAATGGAGGAACTGGGGTGAAAGATTTTATGGATGGTATGGGACTTGGAATGCTTGTAGAACAGTTGGGGGAGCTTAAACTTGGAGAATTGCTCGACACACCGCCTCCTGGATTGGATGAAGCCATAGCCATTTCTAAGGTCATTCAATTCTTGGAATCACCAGAGTATAACATGTTCACCAGAATCGTATTTGATACTGCACCAACGGGTCATACGCTAAGGCTACTCTCTTTACCTGATTTCTTGGATGCATCCATTGGTAAAATCTTGAAGCTTAGACAGAAAATAACCTCGGCTACTTCAGCGATCAAATCAGTTTTTGGGAAAGAAGAAAAGGGGCCTGATGCTGCCGACAAATTGGAAAAACTAAGAGAAAGGATGGTTAAAGTTCGCGAGCTTTTCCGTGACACAGAGTCAACAGAATTCGTCATTGTCACTATCCCAACGGTAATGGCTGTCAGCGAGTCTTCTAGGTTAAGTGCTTCCTTGAAGAAGGAAAGTGTTCCCGTCAAAAGACTCATTGTTAATCAGCTTCTCCCGCCATCCTCCTCAGATTGCAAATTTTGCTCTATTAAGAGAAAGGACCAAATGCGGGCTCTTGATATGATCCGGGAGGATTCAGAACTCTCTGCTTTGACACTGATGGAGGCTCCGCTGGTTGATATGGAGATCAGAGGTGTCCCTGCTCTGCGCTTCTTGGGCGATATCATTTGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArsA_ATPase

Protein Analysis

411

Amino Acids

44.75

Weight (kDa)

7.63

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArsA_ATPase PF02374 88 - 409 9.6e-73 Anion-transporting ATPase
CbiA PF01656 92 - 382 3.8e-08 CobQ/CobB/MinD/ParA nucleotide binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010871)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G10350
fragaria_vesca FvH4_7g18990 FvH4_7g18990
malus_domestica MD01G1105500.v1.1 MD07G1171700.v1.1
prunus_persica Prupe.2G211000_v2.0.a1 Prupe.2G211000_v2.0.a1 Prupe.2G211000_v2.0.a1
pyrus_communis pycom01g13230 pycom07g16630
rosa_chinensis RchiOBHm_Chr1g0362921
rosa_laevigata RLG00000027612
rosa_multiflora Rmu_sc0001502.1_g000006
rosa_roxburghii Rroxscaffold_4G00293650
rosa_rugosa Rorug01G0302100
rosa_samantha Rh1AG311600 Rh1BG274700 Rh1CG291900 Rh1DG305400
rosa_wichuraiana Rw1G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 909
AciI CCGC 4 cut(s) 617, 1055, 1108, 1169
AclWI GGATC 2 cut(s) 365, 1117
AcsI RAATTY 3 cut(s) 230, 938, 1076
AcuI CTGAAG 1 cut(s) 801
AfiI CCNNNNNNNGG 6 cut(s) 58, 355, 437, 481, 623, 1108
AflIII ACRYGT 1 cut(s) 687
AgsI TTSAA 4 cut(s) 191, 662, 787, 1006
AhdI GACNNNNNGTC 1 cut(s) 928
AhlI ACTAGT 1 cut(s) 302
AjnI CCWGG 1 cut(s) 622
AluBI AGCT 7 cut(s) 206, 323, 449, 589, 790, 913, 1048
AluI AGCT 7 cut(s) 206, 323, 449, 589, 790, 913, 1048
Alw26I GTCTC 4 cut(s) 74, 79, 212, 250
AlwI GGATC 2 cut(s) 365, 1117
AoxI GGCC 1 cut(s) 854
ApeKI GCWGC 2 cut(s) 311, 863
ApoI RAATTY 3 cut(s) 230, 938, 1076
Asp700I GAANNNNTTC 2 cut(s) 495, 1017
AspLEI GCGC 1 cut(s) 1209
AspS9I GGNCC 3 cut(s) 440, 854, 1099
AsuC2I CCSGG 1 cut(s) 1127
AsuHPI GGTGA 3 cut(s) 544, 666, 685
AsuNHI GCTAGC 1 cut(s) 206
AvaII GGWCC 2 cut(s) 440, 1099
BanII GRGCYC 1 cut(s) 1114
BbsI GAAGAC 2 cut(s) 6, 975
BbvI GCAGC 2 cut(s) 298, 850
BccI CCATC 5 cut(s) 235, 542, 889, 1066, 1153
BcgI CGANNNNNNTGC 2 cut(s) 380, 414
BciT130I CCWGG 1 cut(s) 624
BcnI CCSGG 1 cut(s) 1127
BcoDI GTCTC 4 cut(s) 74, 79, 212, 250
BcuI ACTAGT 1 cut(s) 302
BfaI CTAG 4 cut(s) 207, 303, 486, 987
BfmI CTRYAG 2 cut(s) 366, 432
BisI GCNGC 2 cut(s) 312, 864
BlsI GCNGC 2 cut(s) 313, 865
Bme1390I CCNGG 2 cut(s) 624, 1127
Bme18I GGWCC 2 cut(s) 440, 1099
BmeRI GACNNNNNGTC 1 cut(s) 928
BmgT120I GGNCC 3 cut(s) 440, 854, 1099
BmiI GGNNCC 3 cut(s) 442, 855, 1167
BmrFI CCNGG 2 cut(s) 624, 1127
BmrI ACTGGG 1 cut(s) 537
BmsI GCATC 3 cut(s) 754, 776, 850
BmtI GCTAGC 1 cut(s) 210
BmuI ACTGGG 1 cut(s) 537
BpiI GAAGAC 2 cut(s) 6, 975
BplI GAGNNNNNCTC 4 cut(s) 230, 262, 591, 623
BpmI CTGGAG 1 cut(s) 435
Bpu10I CCTNAGC 2 cut(s) 402, 734
BpuEI CTTGAG 1 cut(s) 406
BpuMI CCSGG 1 cut(s) 1127
BsaI GGTCTC 1 cut(s) 250
BsaJI CCNNGG 1 cut(s) 807
BsaXI ACNNNNNCTCC 2 cut(s) 604, 634
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 355, 437, 481, 623, 1108
Bse118I RCCGGY 1 cut(s) 139
Bse1I ACTGG 2 cut(s) 418, 532
BseBI CCWGG 1 cut(s) 624
BseDI CCNNGG 1 cut(s) 807
BseGI GGATG 7 cut(s) 125, 553, 637, 767, 769, 900, 1058
BseLI CCNNNNNNNGG 6 cut(s) 58, 355, 437, 481, 623, 1108
BseMII CTCAG 4 cut(s) 90, 416, 468, 1080
BseNI ACTGG 2 cut(s) 418, 532
BseRI GAGGAG 6 cut(s) 24, 27, 93, 109, 303, 1054
BseXI GCAGC 2 cut(s) 298, 850
BsgI GTGCAG 1 cut(s) 699
Bsh1236I CGCG 1 cut(s) 909
BshFI GGCC 1 cut(s) 856
BsiSI CCGG 4 cut(s) 140, 175, 249, 1126
BslFI GGGAC 3 cut(s) 413, 570, 1181
BslI CCNNNNNNNGG 6 cut(s) 58, 355, 437, 481, 623, 1108
BsmAI GTCTC 4 cut(s) 74, 79, 212, 250
BsmBI CGTCTC 2 cut(s) 79, 212
BsmFI GGGAC 3 cut(s) 413, 570, 1181
BsmI GAATGC 2 cut(s) 426, 570
BsnI GGCC 1 cut(s) 856
Bso31I GGTCTC 1 cut(s) 250
Bsp1286I GDGCHC 1 cut(s) 1114
Bsp143I GATC 4 cut(s) 370, 822, 1122, 1185
Bsp68I TCGCGA 1 cut(s) 909
BspACI CCGC 4 cut(s) 617, 1055, 1108, 1169
BspANI GGCC 1 cut(s) 856
BspCNI CTCAG 4 cut(s) 89, 415, 469, 1079
BspFNI CGCG 1 cut(s) 909
BspLI GGNNCC 3 cut(s) 442, 855, 1167
BspOI GCTAGC 1 cut(s) 210
BspPI GGATC 2 cut(s) 365, 1117
BspTNI GGTCTC 1 cut(s) 250
BsrFI RCCGGY 1 cut(s) 139
BsrI ACTGG 2 cut(s) 418, 532
BssAI RCCGGY 1 cut(s) 139
BssECI CCNNGG 1 cut(s) 807
BssMI GATC 4 cut(s) 370, 822, 1122, 1185
Bst2UI CCWGG 1 cut(s) 624
Bst4CI ACNGT 3 cut(s) 133, 579, 964
Bst6I CTCTTC 1 cut(s) 486
BstAPI GCANNNNNTGC 1 cut(s) 1080
BstC8I GCNNGC 4 cut(s) 141, 208, 911, 1110
BstDEI CTNAG 8 cut(s) 76, 402, 477, 651, 734, 791, 884, 1066
BstENI CCTNNNNNAGG 1 cut(s) 435
BstF5I GGATG 7 cut(s) 125, 553, 637, 767, 769, 900, 1058
BstFNI CGCG 1 cut(s) 909
BstHHI GCGC 1 cut(s) 1209
BstKTI GATC 4 cut(s) 373, 825, 1125, 1188
BstMAI GTCTC 4 cut(s) 74, 79, 212, 250
BstMBI GATC 4 cut(s) 370, 822, 1122, 1185
BstMWI GCNNNNNNNGC 5 cut(s) 320, 818, 1054, 1080, 1215
BstNI CCWGG 1 cut(s) 624
BstNSI RCATGY 2 cut(s) 274, 691
BstSCI CCNGG 2 cut(s) 622, 1125
BstSFI CTRYAG 2 cut(s) 366, 432
BstUI CGCG 1 cut(s) 909
BstV1I GCAGC 2 cut(s) 298, 850
BstV2I GAAGAC 2 cut(s) 6, 975
BstX2I RGATCY 1 cut(s) 370
BstYI RGATCY 1 cut(s) 370
BsuRI GGCC 1 cut(s) 856
BtsCI GGATG 7 cut(s) 125, 553, 637, 767, 769, 900, 1058
BtsIMutI CAGTG 2 cut(s) 129, 1154
BtuMI TCGCGA 1 cut(s) 909
Cac8I GCNNGC 4 cut(s) 141, 208, 911, 1110
CfoI GCGC 1 cut(s) 1209
Cfr10I RCCGGY 1 cut(s) 139
Cfr13I GGNCC 3 cut(s) 440, 854, 1099
CviAII CATG 2 cut(s) 271, 688
DdeI CTNAG 8 cut(s) 76, 402, 477, 651, 734, 791, 884, 1066
DpnI GATC 4 cut(s) 372, 824, 1124, 1187
DpnII GATC 4 cut(s) 370, 822, 1122, 1185
DriI GACNNNNNGTC 1 cut(s) 928
Eam1104I CTCTTC 1 cut(s) 486
Eam1105I GACNNNNNGTC 1 cut(s) 928
EarI CTCTTC 1 cut(s) 486
Eco24I GRGCYC 1 cut(s) 1114
Eco31I GGTCTC 1 cut(s) 250
Eco32I GATATC 1 cut(s) 1222
Eco47I GGWCC 2 cut(s) 440, 1099
Eco57I CTGAAG 1 cut(s) 801
EcoNI CCTNNNNNAGG 1 cut(s) 435
EcoO109I RGGNCCY 2 cut(s) 440, 854
EcoRI GAATTC 2 cut(s) 230, 938
EcoRII CCWGG 1 cut(s) 622
EcoRV GATATC 1 cut(s) 1222
EcoT22I ATGCAT 1 cut(s) 769
EcoT38I GRGCYC 1 cut(s) 1114
Esp3I CGTCTC 2 cut(s) 79, 212
FaeI CATG 2 cut(s) 274, 691
FaqI GGGAC 3 cut(s) 413, 570, 1181
FatI CATG 2 cut(s) 270, 687
FauI CCCGC 2 cut(s) 1062, 1101
Fnu4HI GCNGC 2 cut(s) 312, 864
FokI GGATG 7 cut(s) 112, 560, 644, 754, 776, 907, 1045
FriOI GRGCYC 1 cut(s) 1114
Fsp4HI GCNGC 2 cut(s) 312, 864
FspBI CTAG 4 cut(s) 207, 303, 486, 987
GlaI GCGC 1 cut(s) 1208
GluI GCNGC 2 cut(s) 312, 864
GsuI CTGGAG 1 cut(s) 435
HaeIII GGCC 1 cut(s) 856
HapII CCGG 4 cut(s) 140, 175, 249, 1126
HhaI GCGC 1 cut(s) 1209
Hin1II CATG 2 cut(s) 274, 691
Hin6I GCGC 1 cut(s) 1207
HinP1I GCGC 1 cut(s) 1207
HincII GTYRAC 1 cut(s) 933
HindII GTYRAC 1 cut(s) 933
HindIII AAGCTT 1 cut(s) 788
HpaII CCGG 4 cut(s) 140, 175, 249, 1126
HphI GGTGA 3 cut(s) 544, 666, 685
Hpy166II GTNNAC 2 cut(s) 693, 933
Hpy188I TCNGA 4 cut(s) 229, 1069, 1138, 1190
Hpy188III TCNNGA 6 cut(s) 51, 78, 404, 784, 908, 1115
Hpy8I GTNNAC 2 cut(s) 693, 933
HpyAV CCTTC 3 cut(s) 431, 475, 1003
HpyCH4III ACNGT 3 cut(s) 133, 579, 964
HpyCH4V TGCA 4 cut(s) 45, 716, 767, 1074
HpyF10VI GCNNNNNNNGC 5 cut(s) 320, 818, 1054, 1080, 1215
HpyF3I CTNAG 8 cut(s) 76, 402, 477, 651, 734, 791, 884, 1066
Hsp92II CATG 2 cut(s) 274, 691
HspAI GCGC 1 cut(s) 1207
KroI GCCGGC 1 cut(s) 139
KroNI GCCGGC 1 cut(s) 141
Kzo9I GATC 4 cut(s) 370, 822, 1122, 1185
LmnI GCTCC 3 cut(s) 454, 586, 1171
Lsp1109I GCAGC 2 cut(s) 298, 850
LweI GCATC 3 cut(s) 754, 776, 850
MaeI CTAG 4 cut(s) 207, 303, 486, 987
MaeIII GTNAC 2 cut(s) 920, 949
MalI GATC 4 cut(s) 372, 824, 1124, 1187
MboI GATC 4 cut(s) 370, 822, 1122, 1185
MboII GAAGA 6 cut(s) 6, 21, 503, 857, 975, 1018
MflI RGATCY 1 cut(s) 370
MhlI GDGCHC 1 cut(s) 1114
MluCI AATT 7 cut(s) 81, 230, 602, 662, 872, 938, 1076
MlyI GAGTC 3 cut(s) 938, 989, 1026
Mph1103I ATGCAT 1 cut(s) 769
MroNI GCCGGC 1 cut(s) 139
MroXI GAANNNNTTC 2 cut(s) 495, 1017
MseI TTAA 6 cut(s) 162, 591, 900, 992, 1041, 1089
MspA1I CMGCKG 1 cut(s) 1171
MspI CCGG 4 cut(s) 140, 175, 249, 1126
MspR9I CCNGG 2 cut(s) 624, 1127
Mva1269I GAATGC 2 cut(s) 426, 570
MvaI CCWGG 1 cut(s) 624
MvnI CGCG 1 cut(s) 909
MwoI GCNNNNNNNGC 5 cut(s) 320, 818, 1054, 1080, 1215
NaeI GCCGGC 1 cut(s) 141
NciI CCSGG 1 cut(s) 1127
NdeII GATC 4 cut(s) 370, 822, 1122, 1185
NgoMIV GCCGGC 1 cut(s) 139
NheI GCTAGC 1 cut(s) 206
NlaIII CATG 2 cut(s) 274, 691
NlaIV GGNNCC 3 cut(s) 442, 855, 1167
NmeAIII GCCGAG 2 cut(s) 38, 788
NmuCI GTSAC 2 cut(s) 920, 949
NruI TCGCGA 1 cut(s) 909
NsiI ATGCAT 1 cut(s) 769
NspI RCATGY 2 cut(s) 274, 691
PciI ACATGT 1 cut(s) 687
PctI GAATGC 2 cut(s) 426, 570
PdiI GCCGGC 1 cut(s) 141
PdmI GAANNNNTTC 2 cut(s) 495, 1017
PfeI GAWTC 7 cut(s) 54, 145, 330, 392, 671, 699, 1133
PflFI GACNNNGTC 1 cut(s) 10
PfoI TCCNGGA 2 cut(s) 622, 1125
PkrI GCNGC 2 cut(s) 313, 865
PleI GAGTC 3 cut(s) 937, 988, 1026
PpsI GAGTC 3 cut(s) 937, 988, 1026
PpuMI RGGWCCY 1 cut(s) 440
PscI ACATGT 1 cut(s) 687
Psp5II RGGWCCY 1 cut(s) 440
Psp6I CCWGG 1 cut(s) 622
PspGI CCWGG 1 cut(s) 622
PspN4I GGNNCC 3 cut(s) 442, 855, 1167
PspPI GGNCC 3 cut(s) 440, 854, 1099
PspPPI RGGWCCY 1 cut(s) 440
PsrI GAACNNNNNNTAC 2 cut(s) 674, 706
PsuI RGATCY 1 cut(s) 370
PsyI GACNNNGTC 1 cut(s) 10
RruI TCGCGA 1 cut(s) 909
SaqAI TTAA 6 cut(s) 162, 591, 900, 992, 1041, 1089
SatI GCNGC 2 cut(s) 312, 864
Sau3AI GATC 4 cut(s) 370, 822, 1122, 1185
Sau96I GGNCC 3 cut(s) 440, 854, 1099
SchI GAGTC 3 cut(s) 938, 989, 1026
ScrFI CCNGG 2 cut(s) 624, 1127
SduI GDGCHC 1 cut(s) 1114
SfaNI GCATC 3 cut(s) 754, 776, 850
SfcI CTRYAG 2 cut(s) 366, 432
SinI GGWCC 2 cut(s) 440, 1099
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
SpeI ACTAGT 1 cut(s) 302
Sse9I AATT 7 cut(s) 81, 230, 602, 662, 872, 938, 1076
SsiI CCGC 4 cut(s) 617, 1055, 1108, 1169
SspMI CTAG 4 cut(s) 207, 303, 486, 987
StyD4I CCNGG 2 cut(s) 622, 1125
TaaI ACNGT 3 cut(s) 133, 579, 964
TaqI TCGA 3 cut(s) 106, 234, 609
TasI AATT 7 cut(s) 81, 230, 602, 662, 872, 938, 1076
TfiI GAWTC 7 cut(s) 54, 145, 330, 392, 671, 699, 1133
Tru1I TTAA 6 cut(s) 162, 591, 900, 992, 1041, 1089
Tru9I TTAA 6 cut(s) 162, 591, 900, 992, 1041, 1089
TscAI CASTG 2 cut(s) 136, 1161
TseFI GTSAC 2 cut(s) 920, 949
TseI GCWGC 2 cut(s) 311, 863
Tsp45I GTSAC 2 cut(s) 920, 949
TspDTI ATGAA 3 cut(s) 79, 530, 648
TspGWI ACGGA 3 cut(s) 148, 230, 908
TspRI CASTG 2 cut(s) 136, 1161
Tth111I GACNNNGTC 1 cut(s) 10
VpaK11BI GGWCC 2 cut(s) 440, 1099
XagI CCTNNNNNAGG 1 cut(s) 435
XapI RAATTY 3 cut(s) 230, 938, 1076
XceI RCATGY 2 cut(s) 274, 691
XmnI GAANNNNTTC 2 cut(s) 495, 1017
XspI CTAG 4 cut(s) 207, 303, 486, 987
Zsp2I ATGCAT 1 cut(s) 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.