AT3G11773

glutaredoxin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0013093
Physical Location & Seq
Reverse (-)
3722892 .. 3724013
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G11773.2

Sequence Viewer

Length: 453 bp
ATGTGTAGCTGGTGGGCAAGATTCTGTTGCTTCTTCACAACAAGTCTACGAGGAGTGAGAAAGACTTTCGAAGATTGCAGAAGAGTGAGATTCTTGCTAGAGAATCATAAGGCATCATTCCGAGAAAGAGATGTTTCAATGGATTGTGAGTACAAAGAAGAGATGTGGAGATTGCTTGGGGAGCAAGTTACACCTCCTAGGCTCTTCATAAAGTGTAAGTACATTGGTGGAGCAGACGAGGTGGTGTCTCTTAACGAAAACGAGAAGCTCAAGAAGCTTCTAGAAGTGTTTTCATCAGCTAAGTCGCGGCAGTGTGAGATGTGCGAGAACGAAAGATTTTTGATATGTTCGAAATGCAATGGGAGGTCGAGAGTTGTTGCAGAGCACGAAACCTGGAAGAGATGCATAGAGTGTAATGAGAATGGTCTTGTGAAATGTGCTCTTTGTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

150

Amino Acids

17.73

Weight (kDa)

8.53

Isoelectric Point (pI)

31.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRXCR1-2_C PF23733 155 - 199 1.9e-14 GRXCR1/2, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11773 AT3G11773 AT5G06470
fragaria_vesca FvH4_6g20660
malus_domestica MD12G1042900.v1.1 MD14G1041800.v1.1
prunus_persica Prupe.7G092000_v2.0.a1
pyrus_communis pycom14g03560
rosa_chinensis RchiOBHm_Chr3g0476541
rosa_laevigata RLG00000023763
rosa_multiflora Rmu_sc0004556.1_g000002
rosa_roxburghii Rroxscaffold_6G00405240
rosa_rugosa Rorug03G0154700
rosa_samantha Rh3AG205800 Rh3BG238200 Rh3CG232000 Rh3DG231900
rosa_wichuraiana Rw3G018730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 46
AccII CGCG 1 cut(s) 307
AciI CCGC 1 cut(s) 307
AfaI GTAC 3 cut(s) 152, 221, 448
AgsI TTSAA 1 cut(s) 138
AjnI CCWGG 1 cut(s) 392
AluBI AGCT 4 cut(s) 9, 268, 277, 299
AluI AGCT 4 cut(s) 9, 268, 277, 299
Alw21I GWGCWC 2 cut(s) 387, 442
Alw26I GTCTC 1 cut(s) 252
AspA2I CCTAGG 1 cut(s) 197
AsuII TTCGAA 2 cut(s) 69, 350
AvrII CCTAGG 1 cut(s) 197
Bbv12I GWGCWC 2 cut(s) 387, 442
BciT130I CCWGG 1 cut(s) 394
BcoDI GTCTC 1 cut(s) 252
BfaI CTAG 3 cut(s) 98, 198, 281
BisI GCNGC 1 cut(s) 308
BlnI CCTAGG 1 cut(s) 197
BlsI GCNGC 1 cut(s) 309
Bme1390I CCNGG 1 cut(s) 394
BmrFI CCNGG 1 cut(s) 394
BmsI GCATC 2 cut(s) 122, 392
Bpu14I TTCGAA 2 cut(s) 69, 350
BpuEI CTTGAG 1 cut(s) 254
BsaJI CCNNGG 1 cut(s) 197
Bse3DI GCAATG 1 cut(s) 364
BseBI CCWGG 1 cut(s) 394
BseDI CCNNGG 1 cut(s) 197
BseMI GCAATG 1 cut(s) 364
BseRI GAGGAG 1 cut(s) 66
Bsh1236I CGCG 1 cut(s) 307
BsiHKAI GWGCWC 2 cut(s) 387, 442
BsmAI GTCTC 1 cut(s) 252
Bsp119I TTCGAA 2 cut(s) 69, 350
Bsp1286I GDGCHC 2 cut(s) 387, 442
BspACI CCGC 1 cut(s) 307
BspFNI CGCG 1 cut(s) 307
BspQI GCTCTTC 1 cut(s) 209
BspT104I TTCGAA 2 cut(s) 69, 350
BsrDI GCAATG 1 cut(s) 364
BssECI CCNNGG 1 cut(s) 197
BssT1I CCWWGG 1 cut(s) 197
Bst2UI CCWGG 1 cut(s) 394
Bst6I CTCTTC 4 cut(s) 76, 153, 209, 392
BstBI TTCGAA 2 cut(s) 69, 350
BstDEI CTNAG 1 cut(s) 300
BstFNI CGCG 1 cut(s) 307
BstMAI GTCTC 1 cut(s) 252
BstMWI GCNNNNNNNGC 2 cut(s) 181, 274
BstNI CCWGG 1 cut(s) 394
BstSCI CCNGG 1 cut(s) 392
BstUI CGCG 1 cut(s) 307
BtsI GCAGTG 1 cut(s) 317
BtsIMutI CAGTG 1 cut(s) 317
Csp6I GTAC 3 cut(s) 151, 220, 447
CviJI RGCY 5 cut(s) 9, 202, 268, 277, 299
CviKI_1 RGCY 5 cut(s) 9, 202, 268, 277, 299
CviQI GTAC 3 cut(s) 151, 220, 447
DdeI CTNAG 1 cut(s) 300
Eam1104I CTCTTC 4 cut(s) 76, 153, 209, 392
EarI CTCTTC 4 cut(s) 76, 153, 209, 392
Eco130I CCWWGG 1 cut(s) 197
EcoRII CCWGG 1 cut(s) 392
EcoT14I CCWWGG 1 cut(s) 197
EcoT22I ATGCAT 1 cut(s) 407
ErhI CCWWGG 1 cut(s) 197
FaiI YATR 4 cut(s) 108, 209, 346, 407
FblI GTMKAC 1 cut(s) 46
Fnu4HI GCNGC 1 cut(s) 308
Fsp4HI GCNGC 1 cut(s) 308
FspBI CTAG 3 cut(s) 98, 198, 281
GluI GCNGC 1 cut(s) 308
HindIII AAGCTT 1 cut(s) 275
HinfI GANTC 3 cut(s) 21, 90, 103
Hpy166II GTNNAC 1 cut(s) 47
Hpy188I TCNGA 1 cut(s) 122
Hpy188III TCNNGA 3 cut(s) 271, 281, 369
Hpy8I GTNNAC 1 cut(s) 47
HpyCH4V TGCA 4 cut(s) 78, 357, 380, 405
HpyF10VI GCNNNNNNNGC 2 cut(s) 181, 274
HpyF3I CTNAG 1 cut(s) 300
LguI GCTCTTC 1 cut(s) 209
LmnI GCTCC 2 cut(s) 181, 230
LpnPI CCDG 2 cut(s) 379, 406
LweI GCATC 2 cut(s) 122, 392
MaeI CTAG 3 cut(s) 98, 198, 281
MaeIII GTNAC 1 cut(s) 187
MboII GAAGA 6 cut(s) 25, 83, 93, 170, 196, 409
MhlI GDGCHC 2 cut(s) 387, 442
MnlI CCTC 4 cut(s) 44, 204, 232, 357
Mph1103I ATGCAT 1 cut(s) 407
MseI TTAA 2 cut(s) 252, 451
MspR9I CCNGG 1 cut(s) 394
MvaI CCWGG 1 cut(s) 394
MvnI CGCG 1 cut(s) 307
MwoI GCNNNNNNNGC 2 cut(s) 181, 274
NsiI ATGCAT 1 cut(s) 407
NspV TTCGAA 2 cut(s) 69, 350
PciSI GCTCTTC 1 cut(s) 209
PfeI GAWTC 3 cut(s) 21, 90, 103
PkrI GCNGC 1 cut(s) 309
Psp6I CCWGG 1 cut(s) 392
PspGI CCWGG 1 cut(s) 392
RsaI GTAC 3 cut(s) 152, 221, 448
RsaNI GTAC 3 cut(s) 151, 220, 447
SapI GCTCTTC 1 cut(s) 209
SaqAI TTAA 2 cut(s) 252, 451
SatI GCNGC 1 cut(s) 308
ScrFI CCNGG 1 cut(s) 394
SduI GDGCHC 2 cut(s) 387, 442
SetI ASST 8 cut(s) 11, 196, 243, 270, 279, 301, 368, 395
SfaNI GCATC 2 cut(s) 122, 392
SfuI TTCGAA 2 cut(s) 69, 350
SmlI CTYRAG 1 cut(s) 269
SmoI CTYRAG 1 cut(s) 269
SsiI CCGC 1 cut(s) 307
SspMI CTAG 3 cut(s) 98, 198, 281
StyD4I CCNGG 1 cut(s) 392
StyI CCWWGG 1 cut(s) 197
TaqI TCGA 3 cut(s) 69, 350, 368
TatI WGTACW 3 cut(s) 150, 219, 446
TauI GCSGC 1 cut(s) 310
TfiI GAWTC 3 cut(s) 21, 90, 103
Tru1I TTAA 2 cut(s) 252, 451
Tru9I TTAA 2 cut(s) 252, 451
TscAI CASTG 1 cut(s) 317
TspDTI ATGAA 2 cut(s) 196, 282
TspRI CASTG 1 cut(s) 317
XbaI TCTAGA 1 cut(s) 280
XmaJI CCTAGG 1 cut(s) 197
XmiI GTMKAC 1 cut(s) 46
XspI CTAG 3 cut(s) 98, 198, 281
Zsp2I ATGCAT 1 cut(s) 407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.