AT3G15380

Belongs to the CTL (choline transporter-like) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0008363
Physical Location & Seq
Forward (+)
5193203 .. 5196591
3389 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G15380.1

Sequence Viewer

Length: 2103 bp
ATGAGAGGACCTTTAGGAGCAGTGATTGGAAGATATACTTCAAGTGATGGGAGTGCTCCAAATGATGGGATCATCAAGCACAATAGAAAGTGCAGAGATATTACGTTTCTCATCATCTTCATTGCCTTTTGGGTTTCAATGATTGTCAATTCCAGCTTTGGTTTCAACCAAGGCAACCCATTAAGACTCACATATGGATTGGACTATGAAGGGAATGTGTGTGGTAGCAAGCATCGTCACCGTGACCTTACTCAACTTGAGCTTAGATATTGGTTAAACCCTAACCAAGTTTATGAAAGTGGTTTGAAAGATGGGGAACTTAAATTGGCTAATGCTAGAACTATTTGTCTCTTGGATTGCCCTGCACCTTCTGATGATACTCTCAACTGGGTATGTGACTATCCTGACGGCGAGATTCGTCTCAAGATGAATGATTGGATCGATAGGAACTATGATTATTTTGAGTTTCTTACTCCAGAAATGAGGAATTCCTCTCTTCAGCTTCAGGGTCCTTGTTACCCTGTAATATTCCCTAGTGTGAATGTTTATTGGAGCTGCCAATATATTGCTCGTGCTTCAAATTCATCCTTACGCCACTGGCAGCAGATGGGTGGTGTTAATATTCAAGAGGACATGATCATAGACAAATCAATTAGAAGGTCAATGAACTCTCGTGCCTCAGTTCTAAAGCGTTATGTGGCTGATATTGGGAAGTCATGGCCAGTATTGATCGTTTGTGGAGGCCTTGTTCCACTGTTTCTATCCATTATTTGGCTGCTTCTTATTCGACATTTTGTTGCCGCCATGCCCTGGATAACTGTTGTCCTTTTCAACATGCTCTTAATATCAGTCACAGTGTTCTATTACCTGAAAGCTGGATGGATTGGGAATGATGCTGTAACACCTATTATTGGTGAGCATGACCCATACTTTCATGTGTATGGTCGAGAACTGACTCATGTTCGTGGAGTTGCCATTCTGATGACTTTTATCTCTGTTGTTGCTATTCTCACTTCAATTGCCATTATCCGCCGAATTCTCATGGCAACATCAGTCCTCAAGGTAGCTGCTAAAGTAATTGGAGAAGTTCAAGCGCTTATTATATTCCCGGCTATACCGTTCGCGATGCTAGCAATATTCTATATGTTCTGGATATCAGCGGCTCTCCATCTCTTCAGTTCTGGTCAAGTTGTTCAGAACAACTGCAACAACACTAACTGCTGTGCGTATGATCTCGTGTTAAAGAAAGTTAATTGTGACCGTTGTTGCGGTTATAGCATACATTACACCCCTCACATCACCATTGCTATATTCTTCCACCTGTTTGGTTGCTATTGGGCTACACAGTTCTTCATTGCATCTTCTGCGACAGTGATTGCTGGCTCTGTTGCCTCCTATTATTGGGCTCAAGGGGAAGCATCGCCAGAGATACCGTTTCTTCCTGTTTTCGCATCAATGAAGCGGCTTGCACGCTACAACCTAGGATCCGTGGCTCTTGGTTCACTCATTGTCTCTTTTGTTGAGTCTGTTCGGTTCATTCTCGAAGCAATTCGTCGTAAAACAAAAGTAAGCGGGACCATACCTGATCACTGGTTTTGGAGAATGGCTCATTACACTTCACGTGGTTGTCTCAAAAGTGTGGAGTGGACCATCAAATCGGTTAACCGTAATGCCTACATAATGATTGCTATAACAGGGAAAAGCTTCTGCAAATCGTCTGCAATCGCGACAGAGCTGATCATAAGCAACATTCTGAGGATAGGGAAAGTTAATGTGATAGGAGATGTTATATTGTTTCTAGGAAAGCTTTGTGTGAGTCTCTTCAGTGCTCTCTTTGGCTTCTTGATGTTGGATTCGCACCGATATCGTGCTTCTCACAACAAAGTCTCATCCCCGCTATTACCTGTTTTGGCATGTTGGGCATTGGGGTATATTGTGGCAACACTTTTCTTTGCGGTGGTTGAGATGTCGATAGACACCATCATTCTCTCCTTCTGTCAAGACTCAGAGGAGAATCAAGGGAATGCTCAGCACGCACCACCTCTTCTGCTTGAAACTTTAGATAGCAATCAGGAGGAAGAGGTTCAGAGTCTTACTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0000325 GO:0001558 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005326 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005773 GO:0005774 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006836 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008324 GO:0008519 GO:0009505 GO:0009506 GO:0009524 GO:0009551 GO:0009663 GO:0009705 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010008 GO:0010051 GO:0010065 GO:0010067 GO:0010087 GO:0010088 GO:0010154 GO:0010496 GO:0010497 GO:0010817 GO:0012505 GO:0015031 GO:0015075 GO:0015101 GO:0015220 GO:0015695 GO:0015696 GO:0015833 GO:0015871 GO:0016020 GO:0016043 GO:0016192 GO:0022414 GO:0022603 GO:0022604 GO:0022622 GO:0022857 GO:0030054 GO:0030100 GO:0030154 GO:0030312 GO:0031090 GO:0031410 GO:0031901 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032588 GO:0032879 GO:0033036 GO:0034220 GO:0034330 GO:0040008 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044426 GO:0044431 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044462 GO:0044464 GO:0045184 GO:0045216 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048608 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051510 GO:0055044 GO:0055085 GO:0055088 GO:0060627 GO:0061458 GO:0065007 GO:0065008 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072488 GO:0090603 GO:0097218 GO:0097708 GO:0098588 GO:0098655 GO:0098791 GO:0098805 GO:0099402 GO:2000012
KEGG Pathways
Metabolic & Signaling
ko05231 map05231
Pfam Domains
Protein Families
Choline_transpo

Protein Analysis

700

Amino Acids

78.74

Weight (kDa)

8.55

Isoelectric Point (pI)

34.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Choline_transpo PF04515 326 - 670 2.9e-86 Plasma-membrane choline transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 65, 771, 810
AccII CGCG 2 cut(s) 1124, 1727
AciI CCGC 8 cut(s) 801, 1030, 1160, 1269, 1462, 1572, 1895, 1955
AclWI GGATC 4 cut(s) 77, 446, 1479, 1492
AcoI YGGCCR 1 cut(s) 719
AcsI RAATTY 3 cut(s) 487, 580, 1035
AcuI CTGAAG 4 cut(s) 482, 488, 1159, 1807
AcvI CACGTG 1 cut(s) 1622
AfeI AGCGCT 1 cut(s) 1095
AfiI CCNNNNNNNGG 5 cut(s) 65, 771, 810, 911, 1401
AjnI CCWGG 1 cut(s) 809
AloI GAACNNNNNNTCC 2 cut(s) 732, 764
AluBI AGCT 9 cut(s) 156, 262, 502, 555, 875, 1067, 1704, 1735, 1807
AluI AGCT 9 cut(s) 156, 262, 502, 555, 875, 1067, 1704, 1735, 1807
Alw21I GWGCWC 2 cut(s) 58, 1831
Alw26I GTCTC 6 cut(s) 353, 425, 1516, 1634, 1823, 1891
AlwI GGATC 4 cut(s) 77, 446, 1479, 1492
Aor51HI AGCGCT 1 cut(s) 1095
AoxI GGCC 2 cut(s) 719, 742
ApeKI GCWGC 4 cut(s) 555, 601, 775, 1067
ApoI RAATTY 3 cut(s) 487, 580, 1035
Asp700I GAANNNNTTC 3 cut(s) 1548, 1703, 2082
AspA2I CCTAGG 1 cut(s) 1480
AspLEI GCGC 1 cut(s) 1096
AspS9I GGNCC 4 cut(s) 8, 509, 1575, 1647
AsuC2I CCSGG 1 cut(s) 1109
AsuHPI GGTGA 3 cut(s) 230, 926, 1291
AsuNHI GCTAGC 1 cut(s) 1129
AvaII GGWCC 4 cut(s) 8, 509, 1575, 1647
AvrII CCTAGG 1 cut(s) 1480
BalI TGGCCA 1 cut(s) 721
BamHI GGATCC 1 cut(s) 1484
BanII GRGCYC 1 cut(s) 1408
BauI CACGAG 3 cut(s) 570, 672, 1235
BbrPI CACGTG 1 cut(s) 1622
Bbv12I GWGCWC 2 cut(s) 58, 1831
BbvI GCAGC 4 cut(s) 542, 613, 762, 1054
BccI CCATC 8 cut(s) 41, 59, 305, 601, 873, 1176, 1658, 1988
BceAI ACGGC 1 cut(s) 424
BcgI CGANNNNNNTGC 2 cut(s) 1847, 1881
BciT130I CCWGG 1 cut(s) 811
BclI TGATCA 3 cut(s) 636, 1585, 1737
BcnI CCSGG 1 cut(s) 1109
BcoDI GTCTC 6 cut(s) 353, 425, 1516, 1634, 1823, 1891
BfaI CTAG 5 cut(s) 336, 534, 1130, 1481, 1799
BfoI RGCGCY 1 cut(s) 1097
BisI GCNGC 7 cut(s) 556, 602, 776, 801, 1068, 1161, 1463
BlnI CCTAGG 1 cut(s) 1480
BlpI GCTNAGC 1 cut(s) 2028
BlsI GCNGC 7 cut(s) 557, 603, 777, 802, 1069, 1162, 1464
Bme1390I CCNGG 2 cut(s) 811, 1109
Bme18I GGWCC 4 cut(s) 8, 509, 1575, 1647
BmgT120I GGNCC 4 cut(s) 8, 509, 1575, 1647
BmiI GGNNCC 3 cut(s) 510, 1486, 1576
BmrFI CCNGG 2 cut(s) 811, 1109
BmrI ACTGGG 1 cut(s) 397
BmsI GCATC 6 cut(s) 241, 883, 1116, 1367, 1427, 1460
BmtI GCTAGC 1 cut(s) 1133
BmuI ACTGGG 1 cut(s) 397
BplI GAGNNNNNCTC 3 cut(s) 1591, 1623, 2080
BpmI CTGGAG 1 cut(s) 459
Bpu1102I GCTNAGC 1 cut(s) 2028
BpuEI CTTGAG 4 cut(s) 278, 407, 1043, 1392
BpuMI CCSGG 1 cut(s) 1109
Bsa29I ATCGAT 1 cut(s) 441
BsaAI YACGTR 1 cut(s) 1622
BsaBI GATNNNNATC 1 cut(s) 2067
BsaJI CCNNGG 4 cut(s) 169, 809, 1480, 1488
BsaXI ACNNNNNCTCC 2 cut(s) 732, 762
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 771, 810, 911, 1401
Bse1I ACTGG 4 cut(s) 392, 602, 722, 1595
Bse3DI GCAATG 3 cut(s) 120, 1302, 1353
Bse8I GATNNNNATC 1 cut(s) 2067
BseBI CCWGG 1 cut(s) 811
BseCI ATCGAT 1 cut(s) 441
BseDI CCNNGG 4 cut(s) 169, 809, 1480, 1488
BseGI GGATG 3 cut(s) 584, 884, 1889
BseJI GATNNNNATC 1 cut(s) 2067
BseLI CCNNNNNNNGG 5 cut(s) 65, 771, 810, 911, 1401
BseMI GCAATG 3 cut(s) 120, 1302, 1353
BseMII CTCAG 4 cut(s) 693, 1745, 2019, 2042
BseNI ACTGG 4 cut(s) 392, 602, 722, 1595
BseRI GAGGAG 1 cut(s) 2024
BseXI GCAGC 4 cut(s) 542, 613, 762, 1054
BsgI GTGCAG 2 cut(s) 112, 348
Bsh1236I CGCG 2 cut(s) 1124, 1727
BshFI GGCC 2 cut(s) 721, 744
BshVI ATCGAT 1 cut(s) 441
BsiHKAI GWGCWC 2 cut(s) 58, 1831
BsiSI CCGG 1 cut(s) 1109
BslFI GGGAC 1 cut(s) 1588
BslI CCNNNNNNNGG 5 cut(s) 65, 771, 810, 911, 1401
BsmAI GTCTC 6 cut(s) 353, 425, 1516, 1634, 1823, 1891
BsmBI CGTCTC 1 cut(s) 425
BsmFI GGGAC 1 cut(s) 1588
BsmI GAATGC 1 cut(s) 2029
BsnI GGCC 2 cut(s) 721, 744
Bsp1286I GDGCHC 3 cut(s) 58, 1408, 1831
Bsp143I GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
Bsp1720I GCTNAGC 1 cut(s) 2028
Bsp68I TCGCGA 2 cut(s) 1124, 1727
BspACI CCGC 8 cut(s) 801, 1030, 1160, 1269, 1462, 1572, 1895, 1955
BspANI GGCC 2 cut(s) 721, 744
BspCNI CTCAG 4 cut(s) 692, 1746, 2018, 2041
BspDI ATCGAT 1 cut(s) 441
BspFNI CGCG 2 cut(s) 1124, 1727
BspLI GGNNCC 3 cut(s) 510, 1486, 1576
BspOI GCTAGC 1 cut(s) 1133
BspPI GGATC 4 cut(s) 77, 446, 1479, 1492
BsrDI GCAATG 3 cut(s) 120, 1302, 1353
BsrI ACTGG 4 cut(s) 392, 602, 722, 1595
BssECI CCNNGG 4 cut(s) 169, 809, 1480, 1488
BssMI GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
BssSI CACGAG 3 cut(s) 570, 672, 1235
BssT1I CCWWGG 2 cut(s) 169, 1480
Bst2BI CACGAG 3 cut(s) 570, 672, 1235
Bst2UI CCWGG 1 cut(s) 811
Bst6I CTCTTC 5 cut(s) 501, 1178, 1826, 2049, 2073
BstAPI GCANNNNNTGC 1 cut(s) 1364
BstBAI YACGTR 1 cut(s) 1622
BstC8I GCNNGC 6 cut(s) 230, 1131, 1381, 1467, 1471, 2034
BstDEI CTNAG 5 cut(s) 263, 679, 1754, 2005, 2028
BstDSI CCRYGG 1 cut(s) 1488
BstF5I GGATG 3 cut(s) 584, 884, 1889
BstFNI CGCG 2 cut(s) 1124, 1727
BstH2I RGCGCY 1 cut(s) 1097
BstHHI GCGC 1 cut(s) 1096
BstKTI GATC 8 cut(s) 72, 441, 639, 732, 1234, 1487, 1588, 1740
BstMAI GTCTC 6 cut(s) 353, 425, 1516, 1634, 1823, 1891
BstMBI GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
BstMWI GCNNNNNNNGC 5 cut(s) 1130, 1275, 1364, 1919, 2033
BstNI CCWGG 1 cut(s) 811
BstNSI RCATGY 2 cut(s) 838, 1917
BstSCI CCNGG 2 cut(s) 809, 1107
BstUI CGCG 2 cut(s) 1124, 1727
BstV1I GCAGC 4 cut(s) 542, 613, 762, 1054
BstX2I RGATCY 1 cut(s) 1484
BstXI CCANNNNNNTGG 1 cut(s) 1325
BstYI RGATCY 1 cut(s) 1484
Bsu15I ATCGAT 1 cut(s) 441
BsuRI GGCC 2 cut(s) 721, 744
BsuTUI ATCGAT 1 cut(s) 441
BtgI CCRYGG 1 cut(s) 1488
BtgZI GCGATG 2 cut(s) 1139, 1404
BtsCI GGATG 3 cut(s) 584, 884, 1889
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 8 cut(s) 27, 595, 752, 861, 1377, 1588, 1831, 2098
BtuMI TCGCGA 2 cut(s) 1124, 1727
Cac8I GCNNGC 6 cut(s) 230, 1131, 1381, 1467, 1471, 2034
CfoI GCGC 1 cut(s) 1096
Cfr13I GGNCC 4 cut(s) 8, 509, 1575, 1647
ClaI ATCGAT 1 cut(s) 441
CviAII CATG 9 cut(s) 634, 717, 805, 835, 920, 935, 959, 1042, 1914
DdeI CTNAG 5 cut(s) 263, 679, 1754, 2005, 2028
DpnI GATC 8 cut(s) 71, 440, 638, 731, 1233, 1486, 1587, 1739
DpnII GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
EaeI YGGCCR 1 cut(s) 719
Eam1104I CTCTTC 5 cut(s) 501, 1178, 1826, 2049, 2073
EarI CTCTTC 5 cut(s) 501, 1178, 1826, 2049, 2073
EciI GGCGGA 1 cut(s) 1019
Eco130I CCWWGG 2 cut(s) 169, 1480
Eco147I AGGCCT 1 cut(s) 744
Eco24I GRGCYC 1 cut(s) 1408
Eco32I GATATC 2 cut(s) 1155, 1865
Eco47I GGWCC 4 cut(s) 8, 509, 1575, 1647
Eco47III AGCGCT 1 cut(s) 1095
Eco57I CTGAAG 4 cut(s) 482, 488, 1159, 1807
Eco72I CACGTG 1 cut(s) 1622
EcoO109I RGGNCCY 2 cut(s) 8, 509
EcoRI GAATTC 2 cut(s) 487, 1035
EcoRII CCWGG 1 cut(s) 809
EcoRV GATATC 2 cut(s) 1155, 1865
EcoT14I CCWWGG 2 cut(s) 169, 1480
EcoT38I GRGCYC 1 cut(s) 1408
ErhI CCWWGG 2 cut(s) 169, 1480
Esp3I CGTCTC 1 cut(s) 425
FaeI CATG 9 cut(s) 637, 720, 808, 838, 923, 938, 962, 1045, 1917
FalI AAGNNNNNCTT 2 cut(s) 22, 54
FaqI GGGAC 1 cut(s) 1588
FatI CATG 9 cut(s) 633, 716, 804, 834, 919, 934, 958, 1041, 1913
FauI CCCGC 2 cut(s) 1565, 1902
FauNDI CATATG 1 cut(s) 193
FbaI TGATCA 3 cut(s) 636, 1585, 1737
Fnu4HI GCNGC 7 cut(s) 556, 602, 776, 801, 1068, 1161, 1463
FokI GGATG 3 cut(s) 571, 891, 1876
FriOI GRGCYC 1 cut(s) 1408
Fsp4HI GCNGC 7 cut(s) 556, 602, 776, 801, 1068, 1161, 1463
FspBI CTAG 5 cut(s) 336, 534, 1130, 1481, 1799
GlaI GCGC 1 cut(s) 1095
GluI GCNGC 7 cut(s) 556, 602, 776, 801, 1068, 1161, 1463
GsuI CTGGAG 1 cut(s) 459
HaeII RGCGCY 1 cut(s) 1097
HaeIII GGCC 2 cut(s) 721, 744
HapII CCGG 1 cut(s) 1109
HhaI GCGC 1 cut(s) 1096
Hin1II CATG 9 cut(s) 637, 720, 808, 838, 923, 938, 962, 1045, 1917
Hin6I GCGC 1 cut(s) 1094
HinP1I GCGC 1 cut(s) 1094
HincII GTYRAC 1 cut(s) 1663
HindII GTYRAC 1 cut(s) 1663
HindIII AAGCTT 2 cut(s) 1702, 1805
HinfI GANTC 9 cut(s) 186, 415, 955, 1523, 1816, 1853, 2003, 2014, 2089
HpaI GTTAAC 1 cut(s) 1663
HpaII CCGG 1 cut(s) 1109
HphI GGTGA 3 cut(s) 230, 926, 1291
Hpy166II GTNNAC 3 cut(s) 1502, 1647, 1663
Hpy188I TCNGA 6 cut(s) 373, 981, 1197, 1755, 2008, 2088
Hpy8I GTNNAC 3 cut(s) 1502, 1647, 1663
Hpy99I CGWCG 1 cut(s) 1557
HpyAV CCTTC 4 cut(s) 203, 378, 651, 2002
HpyCH4IV ACGT 2 cut(s) 104, 1621
HpyCH4V TGCA 7 cut(s) 93, 365, 1206, 1358, 1469, 1710, 1721
HpyF10VI GCNNNNNNNGC 5 cut(s) 1130, 1275, 1364, 1919, 2033
HpyF3I CTNAG 5 cut(s) 263, 679, 1754, 2005, 2028
HpySE526I ACGT 2 cut(s) 104, 1621
Hsp92II CATG 9 cut(s) 637, 720, 808, 838, 923, 938, 962, 1045, 1917
HspAI GCGC 1 cut(s) 1094
Ksp22I TGATCA 3 cut(s) 636, 1585, 1737
KspAI GTTAAC 1 cut(s) 1663
Kzo9I GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
LmnI GCTCC 3 cut(s) 17, 61, 552
Lsp1109I GCAGC 4 cut(s) 542, 613, 762, 1054
LweI GCATC 6 cut(s) 241, 883, 1116, 1367, 1427, 1460
MaeI CTAG 5 cut(s) 336, 534, 1130, 1481, 1799
MaeII ACGT 2 cut(s) 104, 1621
MaeIII GTNAC 7 cut(s) 236, 242, 395, 515, 850, 898, 1256
MalI GATC 8 cut(s) 71, 440, 638, 731, 1233, 1486, 1587, 1739
MboI GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
MfeI CAATTG 1 cut(s) 1017
MflI RGATCY 1 cut(s) 1484
MhlI GDGCHC 3 cut(s) 58, 1408, 1831
MlsI TGGCCA 1 cut(s) 721
MluNI TGGCCA 1 cut(s) 721
MlyI GAGTC 6 cut(s) 180, 949, 1532, 1825, 1997, 2098
MmeI TCCRAC 1 cut(s) 1830
Mox20I TGGCCA 1 cut(s) 721
MroXI GAANNNNTTC 3 cut(s) 1548, 1703, 2082
MscI TGGCCA 1 cut(s) 721
MseI TTAA 9 cut(s) 182, 275, 321, 618, 842, 1241, 1251, 1662, 1770
MslI CAYNNNNRTG 3 cut(s) 939, 963, 980
Msp20I TGGCCA 1 cut(s) 721
MspA1I CMGCKG 1 cut(s) 1160
MspI CCGG 1 cut(s) 1109
MspR9I CCNGG 2 cut(s) 811, 1109
MunI CAATTG 1 cut(s) 1017
Mva1269I GAATGC 1 cut(s) 2029
MvaI CCWGG 1 cut(s) 811
MvnI CGCG 2 cut(s) 1124, 1727
MwoI GCNNNNNNNGC 5 cut(s) 1130, 1275, 1364, 1919, 2033
NciI CCSGG 1 cut(s) 1109
NdeI CATATG 1 cut(s) 193
NdeII GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
NheI GCTAGC 1 cut(s) 1129
NlaIII CATG 9 cut(s) 637, 720, 808, 838, 923, 938, 962, 1045, 1917
NlaIV GGNNCC 3 cut(s) 510, 1486, 1576
NmuCI GTSAC 5 cut(s) 236, 242, 395, 850, 1256
NruI TCGCGA 2 cut(s) 1124, 1727
NspI RCATGY 2 cut(s) 838, 1917
PceI AGGCCT 1 cut(s) 744
PctI GAATGC 1 cut(s) 2029
PdmI GAANNNNTTC 3 cut(s) 1548, 1703, 2082
PfeI GAWTC 3 cut(s) 415, 1853, 2014
PflMI CCANNNNNTGG 3 cut(s) 65, 771, 810
PkrI GCNGC 7 cut(s) 557, 603, 777, 802, 1069, 1162, 1464
PleI GAGTC 6 cut(s) 180, 949, 1531, 1824, 1997, 2097
PmaCI CACGTG 1 cut(s) 1622
PmlI CACGTG 1 cut(s) 1622
PpsI GAGTC 6 cut(s) 180, 949, 1531, 1824, 1997, 2097
Ppu21I YACGTR 1 cut(s) 1622
PpuMI RGGWCCY 2 cut(s) 8, 509
Psp5II RGGWCCY 2 cut(s) 8, 509
Psp6I CCWGG 1 cut(s) 809
PspCI CACGTG 1 cut(s) 1622
PspGI CCWGG 1 cut(s) 809
PspN4I GGNNCC 3 cut(s) 510, 1486, 1576
PspPI GGNCC 4 cut(s) 8, 509, 1575, 1647
PspPPI RGGWCCY 2 cut(s) 8, 509
PsuI RGATCY 1 cut(s) 1484
RruI TCGCGA 2 cut(s) 1124, 1727
RseI CAYNNNNRTG 3 cut(s) 939, 963, 980
SaqAI TTAA 9 cut(s) 182, 275, 321, 618, 842, 1241, 1251, 1662, 1770
SatI GCNGC 7 cut(s) 556, 602, 776, 801, 1068, 1161, 1463
Sau3AI GATC 8 cut(s) 69, 438, 636, 729, 1231, 1484, 1585, 1737
Sau96I GGNCC 4 cut(s) 8, 509, 1575, 1647
SchI GAGTC 6 cut(s) 180, 949, 1532, 1825, 1997, 2098
ScrFI CCNGG 2 cut(s) 811, 1109
SduI GDGCHC 3 cut(s) 58, 1408, 1831
SfaNI GCATC 6 cut(s) 241, 883, 1116, 1367, 1427, 1460
SinI GGWCC 4 cut(s) 8, 509, 1575, 1647
SmiMI CAYNNNNRTG 3 cut(s) 939, 963, 980
SmlI CTYRAG 4 cut(s) 257, 422, 1058, 1407
SmoI CTYRAG 4 cut(s) 257, 422, 1058, 1407
SseBI AGGCCT 1 cut(s) 744
SsiI CCGC 8 cut(s) 801, 1030, 1160, 1269, 1462, 1572, 1895, 1955
SspI AATATT 3 cut(s) 528, 622, 1137
SspMI CTAG 5 cut(s) 336, 534, 1130, 1481, 1799
StuI AGGCCT 1 cut(s) 744
StyD4I CCNGG 2 cut(s) 809, 1107
StyI CCWWGG 2 cut(s) 169, 1480
TaiI ACGT 2 cut(s) 107, 1624
TaqI TCGA 5 cut(s) 441, 787, 946, 1542, 1970
TauI GCSGC 3 cut(s) 803, 1163, 1465
TfiI GAWTC 3 cut(s) 415, 1853, 2014
Tru1I TTAA 9 cut(s) 182, 275, 321, 618, 842, 1241, 1251, 1662, 1770
Tru9I TTAA 9 cut(s) 182, 275, 321, 618, 842, 1241, 1251, 1662, 1770
TscAI CASTG 7 cut(s) 27, 602, 759, 861, 1377, 1595, 1831
TseFI GTSAC 5 cut(s) 236, 242, 395, 850, 1256
TseI GCWGC 4 cut(s) 555, 601, 775, 1067
Tsp45I GTSAC 5 cut(s) 236, 242, 395, 850, 1256
TspGWI ACGGA 1 cut(s) 1477
TspRI CASTG 7 cut(s) 27, 602, 759, 861, 1377, 1595, 1831
Van91I CCANNNNNTGG 3 cut(s) 65, 771, 810
VpaK11BI GGWCC 4 cut(s) 8, 509, 1575, 1647
XapI RAATTY 3 cut(s) 487, 580, 1035
XceI RCATGY 2 cut(s) 838, 1917
XmaJI CCTAGG 1 cut(s) 1480
XmnI GAANNNNTTC 3 cut(s) 1548, 1703, 2082
XspI CTAG 5 cut(s) 336, 534, 1130, 1481, 1799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.