Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000062.1

Orthogroup ID

OG0008363

Physical Location & Seq

Genomic Coordinates Reverse (-)

113196 .. 119251

Gene Structure 6056 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000062.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

atgaggggtcctttgggggcagtgatagggaggtacccatcaagtgatgggagtgaccagatgagctcaatcatcaggcacaacaggaaatgcaaggaccttgtcttcctggtcatctttattgccttctgggttgctatgattgtcaactcaagctttggattcaatcaaggaaacccattaaggctcacttatggactggactacaaaggaaatgtttgtggcgacaggcatgcaaaacctggtcttcgggaactcgaactcaaatattggttaaatccaaaccaggtttacctgagtggtctaaaagacaatcagttcgacctggctgatgcccggagtatatgcctattggattgccccgccccttctgaagatacactgaattggagatacatggccgatattggaaagtcatggcgagtgctgcttgtttgtgggggaatcgtgccactggctttgtcattgatttggatgcttttgattcgtcattttgttgctgcaacgccttggataacagtggccctctttaatattctcataatattagtcacaatgttttactacttgaaagctggatggataggaaatgatgccatctccccaatcattggtgagcacgatccgtacattcgcataattggaagggagttacatcatctccgtgctgttgcagttctcatgacctttattatggttgtttctgttcttacatcaatcgctatagttcgccgcatccttatggcaacatctgtccttaaggttgctgccaaggtcataggagaagctcaagcactcataatatttccaataattccatataccatccttggagttttttacatgatctggttttcagctgcttttcacctgttcagttctggtcaagtagtccagaatagctgcaactcgaactgctgtgcctatgatcttgcatcaaaacaagttcactgtgatcgttgttgcggttatagcattcattacactcctcatattggaattgctatccttttccacctatttgggtgttattgggctacacagtttttcaaagcagcctcttcaactgttattgctggttctgtggcctcttactattgggctcgtggtgaaacatcaggtgaaataccatttcttccggtcttttcctctatgaaacggctgatgcgctatagcctcgggtcggtggctcttggctccctgattgtgtcatttgtggaatcaataaggtttatgctcgagtcaattcgtcgccgattaaaagtttctggtaccacgcctaataactggttgggaaaggctgcattctctactgctaggttttgcctgagctgtattgagtggacaatcaagtcggttaatcgcaatgcctacattatgattgctataacaggcaaaagcttctgcaagtcttctgcagttgctacagatctgatcatcagtaacatccttcggatagggagggtgaacgtgattggagatgtgatactattccttggcaaattgtgtgtcagcctatcaactgccctttttgcttttcttatgttggatacccacagatacaaatctgcgcataacaagatctcttctccactgtttccagtgttggtttgctgggcccttggttatgtggttgctacacttttctttgctgtggtggagatgtcaatcgatacgatcattctttcattctgccaggattccgaagagcaccaagggactgcgcagtatgcccctccacttctcatcgaaactctaaatgacgaaaatgaaatgcagagacttacccaaggatccaatgatataccttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000325 GO:0001558 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005326 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005773 GO:0005774 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006836 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008324 GO:0008519 GO:0009505 GO:0009506 GO:0009524 GO:0009551 GO:0009663 GO:0009705 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010008 GO:0010051 GO:0010065 GO:0010067 GO:0010087 GO:0010088 GO:0010154 GO:0010496 GO:0010497 GO:0010817 GO:0012505 GO:0015031 GO:0015075 GO:0015101 GO:0015220 GO:0015695 GO:0015696 GO:0015833 GO:0015871 GO:0016020 GO:0016043 GO:0016192 GO:0022414 GO:0022603 GO:0022604 GO:0022622 GO:0022857 GO:0030054 GO:0030100 GO:0030154 GO:0030312 GO:0031090 GO:0031410 GO:0031901 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032588 GO:0032879 GO:0033036 GO:0034220 GO:0034330 GO:0040008 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044426 GO:0044431 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044462 GO:0044464 GO:0045184 GO:0045216 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048608 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051510 GO:0055044 GO:0055085 GO:0055088 GO:0060627 GO:0061458 GO:0065007 GO:0065008 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072488 GO:0090603 GO:0097218 GO:0097708 GO:0098588 GO:0098655 GO:0098791 GO:0098805 GO:0099402 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko05231 map05231

Pfam Domains

Protein Families

Choline_transpo

Protein Analysis

603

Amino Acids

67.17

Weight (kDa)

8.89

Isoelectric Point (pI)

33.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15380
fragaria_vesca	FvH4_3g20420 FvH4_3g20420 FvH4_3g20420
malus_domestica	MD03G1225500.v1.1 MD11G1246200.v1.1
prunus_persica	Prupe.4G183900_v2.0.a1 Prupe.4G183900_v2.0.a1
pyrus_communis	pycom03g17340 pycom11g21830
rosa_chinensis	RchiOBHm_Chr5g0034311
rosa_laevigata	RLG00000033539
rosa_multiflora	Rmu_sc0000062.1_g000020
rosa_roxburghii	Rroxscaffold_1G00045930 Rroxscaffold_1G00045960
rosa_rugosa	Rorug05G0145200
rosa_samantha	Rh5AG236800 Rh5BG237300 Rh5CG267100 Rh5DG244800
rosa_wichuraiana	Rw0G022200 Rw5G021280 Rw5G021650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1351
Acc16I	TGCGCA	2 cut(s)	1572, 1725
Acc65I	GGTACC	2 cut(s)	33, 1271
AccB1I	GGYRCC	2 cut(s)	33, 1271
AccB7I	CCANNNNNTGG	1 cut(s)	611
AciI	CCGC	3 cut(s)	363, 733, 966
AclWI	GGATC	3 cut(s)	617, 1788, 1801
AcoI	YGGCCR	1 cut(s)	399
AcuI	CTGAAG	1 cut(s)	393
AfaI	GTAC	3 cut(s)	35, 629, 1273
AfiI	CCNNNNNNNGG	3 cut(s)	611, 995, 1183
AflII	CTTAAG	1 cut(s)	758
AgsI	TTSAA	4 cut(s)	166, 571, 1051, 1065
AjnI	CCWGG	5 cut(s)	108, 241, 285, 324, 1695
AluBI	AGCT	8 cut(s)	66, 156, 575, 788, 860, 903, 1332, 1401
AluI	AGCT	8 cut(s)	66, 156, 575, 788, 860, 903, 1332, 1401
Alw21I	GWGCWC	3 cut(s)	68, 621, 1713
Alw26I	GTCTC	1 cut(s)	1774
AlwI	GGATC	3 cut(s)	617, 1788, 1801
Ama87I	CYCGRG	2 cut(s)	1178, 1238
AoxI	GGCC	4 cut(s)	399, 522, 1086, 1617
ApaI	GGGCCC	1 cut(s)	1621
ApeKI	GCWGC	7 cut(s)	427, 500, 767, 860, 903, 1055, 1301
ArsI	GACNNNNNNTTYG	4 cut(s)	302, 334, 1494, 1526
Asp718I	GGTACC	2 cut(s)	33, 1271
AspLEI	GCGC	3 cut(s)	1170, 1573, 1726
AspS9I	GGNCC	5 cut(s)	8, 97, 523, 1617, 1618
AsuC2I	CCSGG	1 cut(s)	337
AsuHPI	GGTGA	5 cut(s)	626, 860, 1121, 1133, 1477
AvaI	CYCGRG	2 cut(s)	1178, 1238
AvaII	GGWCC	2 cut(s)	8, 97
BaeGI	GKGCMC	1 cut(s)	1621
BamHI	GGATCC	1 cut(s)	1793
BanI	GGYRCC	2 cut(s)	33, 1271
BanII	GRGCYC	3 cut(s)	68, 1105, 1621
BauI	CACGAG	1 cut(s)	1104
BbsI	GAAGAC	3 cut(s)	97, 239, 1404
Bbv12I	GWGCWC	3 cut(s)	68, 621, 1713
BbvI	GCAGC	7 cut(s)	414, 487, 754, 847, 890, 1067, 1288
BccI	CCATC	5 cut(s)	41, 46, 573, 605, 833
BceAI	ACGGC	1 cut(s)	1175
BcgI	CGANNNNNNTGC	2 cut(s)	215, 249
BciT130I	CCWGG	5 cut(s)	110, 243, 287, 326, 1697
BciVI	GTATCC	1 cut(s)	1543
BclI	TGATCA	1 cut(s)	1434
BcnI	CCSGG	1 cut(s)	337
BcoDI	GTCTC	1 cut(s)	1774
BfaI	CTAG	1 cut(s)	1317
BfmI	CTRYAG	4 cut(s)	723, 1171, 1416, 1425
BfrI	CTTAAG	1 cut(s)	758
BfuI	GTATCC	1 cut(s)	1543
BglII	AGATCT	2 cut(s)	1429, 1581
BisI	GCNGC	8 cut(s)	428, 501, 733, 768, 861, 904, 1056, 1302
BlsI	GCNGC	8 cut(s)	429, 502, 734, 769, 862, 905, 1057, 1303
Bme1390I	CCNGG	6 cut(s)	110, 243, 287, 326, 337, 1697
Bme18I	GGWCC	2 cut(s)	8, 97
BmeT110I	CYCGRG	2 cut(s)	1178, 1238
BmgT120I	GGNCC	5 cut(s)	8, 97, 523, 1617, 1618
BmiI	GGNNCC	6 cut(s)	9, 35, 1198, 1273, 1619, 1795
BmrFI	CCNGG	6 cut(s)	110, 243, 287, 326, 337, 1697
BmsI	GCATC	6 cut(s)	322, 465, 583, 744, 944, 1155
BpiI	GAAGAC	3 cut(s)	97, 239, 1404
Bpu10I	CCTNAGC	1 cut(s)	1328
BpuEI	CTTGAG	2 cut(s)	136, 774
BpuMI	CCSGG	1 cut(s)	337
Bsa29I	ATCGAT	1 cut(s)	1671
BsaBI	GATNNNNATC	2 cut(s)	1564, 1667
BsaJI	CCNNGG	8 cut(s)	509, 771, 829, 1177, 1495, 1621, 1714, 1789
BsaWI	WCCGGW	1 cut(s)	1138
BsaXI	ACNNNNNCTCC	2 cut(s)	645, 675
Bsc4I	CCNNNNNNNGG	3 cut(s)	611, 995, 1183
Bse1I	ACTGG	4 cut(s)	204, 459, 1292, 1601
Bse3DI	GCAATG	1 cut(s)	1372
Bse8I	GATNNNNATC	2 cut(s)	1564, 1667
BseBI	CCWGG	5 cut(s)	110, 243, 287, 326, 1697
BseCI	ATCGAT	1 cut(s)	1671
BseDI	CCNNGG	8 cut(s)	509, 771, 829, 1177, 1495, 1621, 1714, 1789
BseGI	GGATG	5 cut(s)	480, 584, 735, 825, 1446
BseJI	GATNNNNATC	2 cut(s)	1564, 1667
BseLI	CCNNNNNNNGG	3 cut(s)	611, 995, 1183
BseMI	GCAATG	1 cut(s)	1372
BseMII	CTCAG	2 cut(s)	287, 1319
BseNI	ACTGG	4 cut(s)	204, 459, 1292, 1601
BseRI	GAGGAG	1 cut(s)	978
BseSI	GKGCMC	1 cut(s)	1621
BseXI	GCAGC	7 cut(s)	414, 487, 754, 847, 890, 1067, 1288
BseYI	CCCAGC	1 cut(s)	1614
BshFI	GGCC	4 cut(s)	401, 524, 1088, 1619
BshNI	GGYRCC	2 cut(s)	33, 1271
BshVI	ATCGAT	1 cut(s)	1671
BsiHKAI	GWGCWC	3 cut(s)	68, 621, 1713
BsiHKCI	CYCGRG	2 cut(s)	1178, 1238
BsiSI	CCGG	2 cut(s)	337, 1139
BslFI	GGGAC	1 cut(s)	1732
BslI	CCNNNNNNNGG	3 cut(s)	611, 995, 1183
BsmAI	GTCTC	1 cut(s)	1774
BsmFI	GGGAC	1 cut(s)	1732
BsmI	GAATGC	2 cut(s)	975, 1304
BsnI	GGCC	4 cut(s)	401, 524, 1088, 1619
BsoBI	CYCGRG	2 cut(s)	1178, 1238
Bsp120I	GGGCCC	1 cut(s)	1617
Bsp1286I	GDGCHC	5 cut(s)	68, 621, 1105, 1621, 1713
Bsp143I	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
BspACI	CCGC	3 cut(s)	363, 733, 966
BspANI	GGCC	4 cut(s)	401, 524, 1088, 1619
BspCNI	CTCAG	2 cut(s)	288, 1320
BspDI	ATCGAT	1 cut(s)	1671
BspHI	TCATGA	1 cut(s)	681
BspLI	GGNNCC	6 cut(s)	9, 35, 1198, 1273, 1619, 1795
BspMAI	CTGCAG	1 cut(s)	1420
BspPI	GGATC	3 cut(s)	617, 1788, 1801
BspQI	GCTCTTC	1 cut(s)	1701
BspT107I	GGYRCC	2 cut(s)	33, 1271
BspTI	CTTAAG	1 cut(s)	758
BsrDI	GCAATG	1 cut(s)	1372
BsrI	ACTGG	4 cut(s)	204, 459, 1292, 1601
BssECI	CCNNGG	8 cut(s)	509, 771, 829, 1177, 1495, 1621, 1714, 1789
BssMI	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
BssSI	CACGAG	1 cut(s)	1104
BssT1I	CCWWGG	7 cut(s)	509, 771, 829, 1495, 1621, 1714, 1789
Bst2BI	CACGAG	1 cut(s)	1104
Bst2UI	CCWGG	5 cut(s)	110, 243, 287, 326, 1697
Bst4CI	ACNGT	5 cut(s)	520, 953, 1044, 1069, 1596
Bst6I	CTCTTC	3 cut(s)	1066, 1591, 1701
BstAFI	CTTAAG	1 cut(s)	758
BstC8I	GCNNGC	1 cut(s)	234
BstDEI	CTNAG	3 cut(s)	296, 1328, 1809
BstF5I	GGATG	5 cut(s)	480, 584, 735, 825, 1446
BstHHI	GCGC	3 cut(s)	1170, 1573, 1726
BstKTI	GATC	9 cut(s)	625, 849, 931, 958, 1432, 1437, 1584, 1680, 1796
BstMAI	GTCTC	1 cut(s)	1774
BstMBI	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
BstMWI	GCNNNNNNNGC	4 cut(s)	427, 972, 1532, 1730
BstNI	CCWGG	5 cut(s)	110, 243, 287, 326, 1697
BstNSI	RCATGY	1 cut(s)	236
BstSCI	CCNGG	6 cut(s)	108, 241, 285, 324, 335, 1695
BstSFI	CTRYAG	4 cut(s)	723, 1171, 1416, 1425
BstSLI	GKGCMC	1 cut(s)	1621
BstV1I	GCAGC	7 cut(s)	414, 487, 754, 847, 890, 1067, 1288
BstV2I	GAAGAC	3 cut(s)	97, 239, 1404
BstX2I	RGATCY	3 cut(s)	1429, 1581, 1793
BstXI	CCANNNNNNTGG	1 cut(s)	1022
BstYI	RGATCY	3 cut(s)	1429, 1581, 1793
Bsu15I	ATCGAT	1 cut(s)	1671
BsuI	GTATCC	1 cut(s)	1543
BsuRI	GGCC	4 cut(s)	401, 524, 1088, 1619
BsuTUI	ATCGAT	1 cut(s)	1671
BtsCI	GGATG	5 cut(s)	480, 584, 735, 825, 1446
BtsI	GCAGTG	1 cut(s)	27
BtsIMutI	CAGTG	7 cut(s)	27, 380, 452, 525, 949, 1592, 1608
Cac8I	GCNNGC	1 cut(s)	234
CciI	TCATGA	1 cut(s)	681
CfoI	GCGC	3 cut(s)	1170, 1573, 1726
Cfr13I	GGNCC	5 cut(s)	8, 97, 523, 1617, 1618
ClaI	ATCGAT	1 cut(s)	1671
CsiI	ACCWGGT	2 cut(s)	241, 285
Csp6I	GTAC	3 cut(s)	34, 628, 1272
CspCI	CAANNNNNGTGG	2 cut(s)	441, 476
CviAII	CATG	5 cut(s)	233, 397, 417, 682, 844
CviQI	GTAC	3 cut(s)	34, 628, 1272
DdeI	CTNAG	3 cut(s)	296, 1328, 1809
DpnI	GATC	9 cut(s)	624, 848, 930, 957, 1431, 1436, 1583, 1679, 1795
DpnII	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
DrdI	GACNNNNNNGTC	1 cut(s)	1351
DseDI	GACNNNNNNGTC	1 cut(s)	1351
EaeI	YGGCCR	1 cut(s)	399
Eam1104I	CTCTTC	3 cut(s)	1066, 1591, 1701
EarI	CTCTTC	3 cut(s)	1066, 1591, 1701
Ecl136II	GAGCTC	1 cut(s)	66
Eco130I	CCWWGG	7 cut(s)	509, 771, 829, 1495, 1621, 1714, 1789
Eco24I	GRGCYC	3 cut(s)	68, 1105, 1621
Eco47I	GGWCC	2 cut(s)	8, 97
Eco53kI	GAGCTC	1 cut(s)	66
Eco57I	CTGAAG	1 cut(s)	393
Eco88I	CYCGRG	2 cut(s)	1178, 1238
EcoICRI	GAGCTC	1 cut(s)	66
EcoO109I	RGGNCCY	3 cut(s)	8, 97, 1618
EcoRII	CCWGG	5 cut(s)	108, 241, 285, 324, 1695
EcoT14I	CCWWGG	7 cut(s)	509, 771, 829, 1495, 1621, 1714, 1789
EcoT38I	GRGCYC	3 cut(s)	68, 1105, 1621
ErhI	CCWWGG	7 cut(s)	509, 771, 829, 1495, 1621, 1714, 1789
FaeI	CATG	5 cut(s)	236, 400, 420, 685, 847
FalI	AAGNNNNNCTT	2 cut(s)	175, 207
FaqI	GGGAC	1 cut(s)	1732
FatI	CATG	5 cut(s)	232, 396, 416, 681, 843
FauI	CCCGC	1 cut(s)	370
FbaI	TGATCA	1 cut(s)	1434
Fnu4HI	GCNGC	8 cut(s)	428, 501, 733, 768, 861, 904, 1056, 1302
FokI	GGATG	5 cut(s)	487, 591, 722, 812, 1433
FriOI	GRGCYC	3 cut(s)	68, 1105, 1621
Fsp4HI	GCNGC	8 cut(s)	428, 501, 733, 768, 861, 904, 1056, 1302
FspBI	CTAG	1 cut(s)	1317
FspI	TGCGCA	2 cut(s)	1572, 1725
GlaI	GCGC	3 cut(s)	1169, 1572, 1725
GluI	GCNGC	8 cut(s)	428, 501, 733, 768, 861, 904, 1056, 1302
GsaI	CCCAGC	1 cut(s)	1618
HaeIII	GGCC	4 cut(s)	401, 524, 1088, 1619
HapII	CCGG	2 cut(s)	337, 1139
HhaI	GCGC	3 cut(s)	1170, 1573, 1726
Hin1II	CATG	5 cut(s)	236, 400, 420, 685, 847
Hin6I	GCGC	3 cut(s)	1168, 1571, 1724
HinP1I	GCGC	3 cut(s)	1168, 1571, 1724
HincII	GTYRAC	1 cut(s)	148
HindII	GTYRAC	1 cut(s)	148
HindIII	AAGCTT	2 cut(s)	154, 1399
HinfI	GANTC	6 cut(s)	162, 444, 484, 1220, 1241, 1700
HpaII	CCGG	2 cut(s)	337, 1139
HphI	GGTGA	5 cut(s)	626, 860, 1121, 1133, 1477
Hpy166II	GTNNAC	5 cut(s)	148, 292, 949, 1344, 1468
Hpy188I	TCNGA	4 cut(s)	373, 1434, 1455, 1705
Hpy188III	TCNNGA	3 cut(s)	251, 682, 895
Hpy8I	GTNNAC	5 cut(s)	148, 292, 949, 1344, 1468
Hpy99I	CGWCG	1 cut(s)	1254
HpyAV	CCTTC	4 cut(s)	136, 378, 639, 1460
HpyCH4III	ACNGT	5 cut(s)	520, 953, 1044, 1069, 1596
HpyCH4IV	ACGT	1 cut(s)	1470
HpyF10VI	GCNNNNNNNGC	4 cut(s)	427, 972, 1532, 1730
HpyF3I	CTNAG	3 cut(s)	296, 1328, 1809
HpySE526I	ACGT	1 cut(s)	1470
Hsp92II	CATG	5 cut(s)	236, 400, 420, 685, 847
HspAI	GCGC	3 cut(s)	1168, 1571, 1724
KpnI	GGTACC	2 cut(s)	37, 1275
Ksp22I	TGATCA	1 cut(s)	1434
Kzo9I	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
LguI	GCTCTTC	1 cut(s)	1701
LmnI	GCTCC	1 cut(s)	1202
Lsp1109I	GCAGC	7 cut(s)	414, 487, 754, 847, 890, 1067, 1288
LweI	GCATC	6 cut(s)	322, 465, 583, 744, 944, 1155
MabI	ACCWGGT	2 cut(s)	241, 285
MaeI	CTAG	1 cut(s)	1317
MaeII	ACGT	1 cut(s)	1470
MaeIII	GTNAC	4 cut(s)	53, 550, 651, 1442
MalI	GATC	9 cut(s)	624, 848, 930, 957, 1431, 1436, 1583, 1679, 1795
MboI	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
MboII	GAAGA	8 cut(s)	97, 239, 386, 1053, 1127, 1404, 1578, 1718
MflI	RGATCY	3 cut(s)	1429, 1581, 1793
MhlI	GDGCHC	5 cut(s)	68, 621, 1105, 1621, 1713
MluCI	AATT	6 cut(s)	385, 639, 813, 999, 1245, 1502
MlyI	GAGTC	1 cut(s)	1250
MmeI	TCCRAC	1 cut(s)	1527
MnlI	CCTC	9 cut(s)	24, 536, 999, 1069, 1099, 1159, 1187, 1455, 1746
MseI	TTAA	6 cut(s)	182, 275, 531, 759, 1259, 1359
MslI	CAYNNNNRTG	2 cut(s)	663, 740
MspA1I	CMGCKG	1 cut(s)	860
MspCI	CTTAAG	1 cut(s)	758
MspI	CCGG	2 cut(s)	337, 1139
MspR9I	CCNGG	6 cut(s)	110, 243, 287, 326, 337, 1697
Mva1269I	GAATGC	2 cut(s)	975, 1304
MvaI	CCWGG	5 cut(s)	110, 243, 287, 326, 1697
MwoI	GCNNNNNNNGC	4 cut(s)	427, 972, 1532, 1730
NciI	CCSGG	1 cut(s)	337
NdeII	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
NlaIII	CATG	5 cut(s)	236, 400, 420, 685, 847
NlaIV	GGNNCC	6 cut(s)	9, 35, 1198, 1273, 1619, 1795
NmuCI	GTSAC	2 cut(s)	53, 550
NsbI	TGCGCA	2 cut(s)	1572, 1725
NspI	RCATGY	1 cut(s)	236
PaeI	GCATGC	1 cut(s)	236
PaeR7I	CTCGAG	1 cut(s)	1238
PagI	TCATGA	1 cut(s)	681
PciSI	GCTCTTC	1 cut(s)	1701
PctI	GAATGC	2 cut(s)	975, 1304
PfeI	GAWTC	5 cut(s)	162, 444, 484, 1220, 1700
PflFI	GACNNNGTC	1 cut(s)	101
PflMI	CCANNNNNTGG	1 cut(s)	611
PkrI	GCNGC	8 cut(s)	429, 502, 734, 769, 862, 905, 1057, 1303
PleI	GAGTC	1 cut(s)	1249
PpsI	GAGTC	1 cut(s)	1249
PpuMI	RGGWCCY	2 cut(s)	8, 97
Psp124BI	GAGCTC	1 cut(s)	68
Psp5II	RGGWCCY	2 cut(s)	8, 97
Psp6I	CCWGG	5 cut(s)	108, 241, 285, 324, 1695
PspFI	CCCAGC	1 cut(s)	1614
PspGI	CCWGG	5 cut(s)	108, 241, 285, 324, 1695
PspN4I	GGNNCC	6 cut(s)	9, 35, 1198, 1273, 1619, 1795
PspOMI	GGGCCC	1 cut(s)	1617
PspPI	GGNCC	5 cut(s)	8, 97, 523, 1617, 1618
PspPPI	RGGWCCY	2 cut(s)	8, 97
PspXI	VCTCGAGB	1 cut(s)	1238
PstI	CTGCAG	1 cut(s)	1420
PsuI	RGATCY	3 cut(s)	1429, 1581, 1793
PsyI	GACNNNGTC	1 cut(s)	101
PvuII	CAGCTG	1 cut(s)	860
RsaI	GTAC	3 cut(s)	35, 629, 1273
RsaNI	GTAC	3 cut(s)	34, 628, 1272
RseI	CAYNNNNRTG	2 cut(s)	663, 740
SacI	GAGCTC	1 cut(s)	68
SapI	GCTCTTC	1 cut(s)	1701
SaqAI	TTAA	6 cut(s)	182, 275, 531, 759, 1259, 1359
SatI	GCNGC	8 cut(s)	428, 501, 733, 768, 861, 904, 1056, 1302
Sau3AI	GATC	9 cut(s)	622, 846, 928, 955, 1429, 1434, 1581, 1677, 1793
Sau96I	GGNCC	5 cut(s)	8, 97, 523, 1617, 1618
SchI	GAGTC	1 cut(s)	1250
ScrFI	CCNGG	6 cut(s)	110, 243, 287, 326, 337, 1697
SduI	GDGCHC	5 cut(s)	68, 621, 1105, 1621, 1713
SexAI	ACCWGGT	2 cut(s)	241, 285
SfaNI	GCATC	6 cut(s)	322, 465, 583, 744, 944, 1155
SfcI	CTRYAG	4 cut(s)	723, 1171, 1416, 1425
Sfr274I	CTCGAG	1 cut(s)	1238
SinI	GGWCC	2 cut(s)	8, 97
SlaI	CTCGAG	1 cut(s)	1238
SmiMI	CAYNNNNRTG	2 cut(s)	663, 740
SmlI	CTYRAG	4 cut(s)	151, 758, 789, 1238
SmoI	CTYRAG	4 cut(s)	151, 758, 789, 1238
SphI	GCATGC	1 cut(s)	236
Sse9I	AATT	6 cut(s)	385, 639, 813, 999, 1245, 1502
SsiI	CCGC	3 cut(s)	363, 733, 966
SspI	AATATT	4 cut(s)	269, 535, 546, 804
SspMI	CTAG	1 cut(s)	1317
SstI	GAGCTC	1 cut(s)	68
StyD4I	CCNGG	6 cut(s)	108, 241, 285, 324, 335, 1695
StyI	CCWWGG	7 cut(s)	509, 771, 829, 1495, 1621, 1714, 1789
TaaI	ACNGT	5 cut(s)	520, 953, 1044, 1069, 1596
TaiI	ACGT	1 cut(s)	1473
TaqI	TCGA	6 cut(s)	258, 321, 911, 1239, 1671, 1749
TasI	AATT	6 cut(s)	385, 639, 813, 999, 1245, 1502
TauI	GCSGC	1 cut(s)	735
TfiI	GAWTC	5 cut(s)	162, 444, 484, 1220, 1700
Tru1I	TTAA	6 cut(s)	182, 275, 531, 759, 1259, 1359
Tru9I	TTAA	6 cut(s)	182, 275, 531, 759, 1259, 1359
TscAI	CASTG	7 cut(s)	27, 387, 459, 525, 956, 1599, 1608
TseFI	GTSAC	2 cut(s)	53, 550
TseI	GCWGC	7 cut(s)	427, 500, 767, 860, 903, 1055, 1301
Tsp45I	GTSAC	2 cut(s)	53, 550
TspDTI	ATGAA	4 cut(s)	968, 1169, 1677, 1785
TspGWI	ACGGA	2 cut(s)	615, 653
TspRI	CASTG	7 cut(s)	27, 387, 459, 525, 956, 1599, 1608
Tth111I	GACNNNGTC	1 cut(s)	101
Van91I	CCANNNNNTGG	1 cut(s)	611
Vha464I	CTTAAG	1 cut(s)	758
VpaK11BI	GGWCC	2 cut(s)	8, 97
XceI	RCATGY	1 cut(s)	236
XhoI	CTCGAG	1 cut(s)	1238
XspI	CTAG	1 cut(s)	1317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.