FvH4_3g20420

Belongs to the CTL (choline transporter-like) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0008363
Physical Location & Seq
Forward (+)
13442397 .. 13448823
6427 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g20420.t2

Sequence Viewer

Length: 2109 bp
ATGAGGGGTCCTTTGGGGGCAGTGATAGGGAGGTACCCTTCAAGTGATGGGAGTGACCAAATGGGCTCAATCATCAGGCACAACAGGAAATGCAGAGACCTTGTGTTTCTCATCATCTTTATTGCCTTCTGGGTTGCTATGATTGTCAACTCCAGCTTTGGATTCAACCAAGGAAACCCATTAAGGCTTACTTATGGACTGGACTACAAAGGGAATGTGTGTGGTGACAAGCATGCACATCCTGGTCTTCGGGAACTGGAACTCAAATACTGGTTAAACCCAAACCAGGTTTACTTGAGTGGTCTAAAAGACAATCAATTCAAGTTGGAAAATGCCCGGAGTATATGCCTATTGGATTGTCCTTCCCCTTCAGACGATACACTGAATTGGGTGTGTGATTACCCAGAAGGAGAGATCCGTCTCTCAATGAGTGATTGGATTGACAGAAATTATGATTATTTTGAGTTTCTTACTCCTGAAATGCGAAATGCGTCTCTTCAACTTCAGGGCCCTTGTTACCCTGTCATATTTCCTAGTGTAAACGTATTTTGGAGCTGCCAATTTATTGCTCGTCCATCAAACAGTTCGTTGAAGCATTGGCAGCAAATGGGTGGAGTGAATATTAATGAGGATATTATTATAGACAAATCTATTCATAAGTCCATCAATTCTCGGTCAGCTGTTTTAAAGAGATACATGGCTGATATTGGAAAGTCATGGCCAGTGTTGCTTGTCTGTGGAGGAATTGTGCCACTGGCTTTGTCAGTGATTTGGCTCCTTCTGATTCGTTATTTTGTTGCTGCTATGCCTTGGATAACAGTGGCCCTCTTTAATATTCTCATAATATCAGTCACAATGTTTTACTACTTGAAAGCTGGATGGATAGGAAATGATGCCATCTCCCCAATCATTGGTGAGCACGATCCGTACATTCGCATAATTGGAAGGGAGTTACATCATCTCCGTGCTGTTGCAGTTCTCATGACCTTTATTATGGCTGTTTCTGTTCTCACATCAATTGCTATAGTCCGCCGCATCCTTATGGCAACATCTGTCCTTAAGGTTGCTGCAAAGGTGATAGGAGAAGCTCAAGCACTCATAATATTTCCAATCATTCCATATACCATCCTTGGAGTTTTTTACATGATCTGGTTTTCAGCTGCTTTTCACCTGTTTAGTTCTGGTCAAGTAGTCCAGAATAACTGCAGCTCGAACTGCTGTGCCTATGATCTTGCATCAAAACAAGTAAATTGTGATCGTTGTTGCGGTTATAGCATTCATTACGCTCCTCATATTGGAATTGCCATCTTCTTCCACCTATTTGGGTGTTATTGGGCTACACAGTTTTTCAAAGCAGCCTCTTCAACTGTTATTGCTGGTTCTGTGGCCTCTTATTATTGGGCTCGTGGTGAAACATCAGGTGAAATTCCATTTCTTCCGGTTTTTTCCTCTATGAAACGGCTGATGCGCTATAGCCTTGGGTCTGTTGCTCTTGGCTCCCTGATTGTGTCATCTGTGGAATCAATAAGGTTTATGCTTGAGTCAATTCGTCGCCGATTAAAAGTTTCTGGTACCACACCTAATAATTGGTTTGGAAAGGCTGCCTTCCACACTGCTAGGTTTTGCCTGAGCTGTATCGAGTGGACACTCAAGTCAGTTAATCGCAATGCCTACATTATGATTGCTATAACAGGTAAAAGCTTCTGCAAATCTTCTGCAGTTGCTACAGATCTGATCATCAGTAACATCCTTCGGATAGGGAGGGTGAATGTGATTGGAGATGTGATACTATTCCTTGGCAAATTGTGTGTCAGCCTATCGACTGCCCTTTTTGCTTTTCTTATGTTGGATACTCACAGATACAAGTCTGCGCATAACAAGATCTCTTCTCCACTATTTCCAGTGTTGGTTTGCTGGGGCCTTGGTTATGTGGTTGCTACACTTTTCTTTGCTGTGGTGGAGATGTCAATTGATACGATCATTCTTTCGTTCTGCCAGGATTCCGAAGAGCACCATGGAACTGCCCAGTATGCTCCTCCACTTCTCATTGAAACTTTAAATGACCAAAATGAGATGCAGAGACTTACCCAAGGATCCAACGAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0000325 GO:0001558 GO:0003002 GO:0003006 GO:0003674 GO:0005215 GO:0005326 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005773 GO:0005774 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006836 GO:0007275 GO:0007389 GO:0008104 GO:0008150 GO:0008324 GO:0008519 GO:0009505 GO:0009506 GO:0009524 GO:0009551 GO:0009663 GO:0009705 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010008 GO:0010051 GO:0010065 GO:0010067 GO:0010087 GO:0010088 GO:0010154 GO:0010496 GO:0010497 GO:0010817 GO:0012505 GO:0015031 GO:0015075 GO:0015101 GO:0015220 GO:0015695 GO:0015696 GO:0015833 GO:0015871 GO:0016020 GO:0016043 GO:0016192 GO:0022414 GO:0022603 GO:0022604 GO:0022622 GO:0022857 GO:0030054 GO:0030100 GO:0030154 GO:0030312 GO:0031090 GO:0031410 GO:0031901 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032588 GO:0032879 GO:0033036 GO:0034220 GO:0034330 GO:0040008 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044426 GO:0044431 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044462 GO:0044464 GO:0045184 GO:0045216 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048608 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051510 GO:0055044 GO:0055085 GO:0055088 GO:0060627 GO:0061458 GO:0065007 GO:0065008 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072488 GO:0090603 GO:0097218 GO:0097708 GO:0098588 GO:0098655 GO:0098791 GO:0098805 GO:0099402 GO:2000012
KEGG Pathways
Metabolic & Signaling
ko05231 map05231
Pfam Domains
Protein Families
Choline_transpo

Protein Analysis

703

Amino Acids

78.63

Weight (kDa)

8.73

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Choline_transpo PF04515 125 - 467 2.8e-89 Plasma-membrane choline transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1651
Acc16I TGCGCA 1 cut(s) 1872
Acc65I GGTACC 2 cut(s) 33, 1571
AccB1I GGYRCC 2 cut(s) 33, 1571
AccB7I CCANNNNNTGG 1 cut(s) 911
AciI CCGC 3 cut(s) 1030, 1033, 1266
AclWI GGATC 4 cut(s) 409, 917, 2088, 2101
AcoI YGGCCR 1 cut(s) 719
AcsI RAATTY 2 cut(s) 1425, 2103
AcuI CTGAAG 2 cut(s) 354, 488
AfaI GTAC 3 cut(s) 35, 929, 1573
AfiI CCNNNNNNNGG 3 cut(s) 286, 911, 1295
AflII CTTAAG 1 cut(s) 1058
AgsI TTSAA 9 cut(s) 42, 166, 322, 500, 592, 871, 1351, 1365, 2051
AjnI CCWGG 3 cut(s) 241, 285, 1995
AluBI AGCT 9 cut(s) 156, 555, 680, 875, 1088, 1160, 1209, 1632, 1701
AluI AGCT 9 cut(s) 156, 555, 680, 875, 1088, 1160, 1209, 1632, 1701
Alw21I GWGCWC 2 cut(s) 921, 2013
Alw26I GTCTC 4 cut(s) 90, 425, 498, 2074
AlwI GGATC 4 cut(s) 409, 917, 2088, 2101
AoxI GGCC 5 cut(s) 508, 719, 822, 1386, 1918
ApaI GGGCCC 1 cut(s) 512
ApeKI GCWGC 8 cut(s) 555, 601, 800, 1067, 1160, 1206, 1355, 1601
ApoI RAATTY 2 cut(s) 1425, 2103
ArsI GACNNNNNNTTYG 2 cut(s) 1794, 1826
AseI ATTAAT 1 cut(s) 624
Asp718I GGTACC 2 cut(s) 33, 1571
AspLEI GCGC 2 cut(s) 1470, 1873
AspS9I GGNCC 5 cut(s) 8, 508, 509, 823, 1918
AsuC2I CCSGG 1 cut(s) 337
AsuHPI GGTGA 7 cut(s) 236, 926, 1087, 1160, 1421, 1433, 1777
AvaII GGWCC 1 cut(s) 8
BaeGI GKGCMC 1 cut(s) 512
BalI TGGCCA 1 cut(s) 721
BamHI GGATCC 1 cut(s) 2093
BanI GGYRCC 2 cut(s) 33, 1571
BanII GRGCYC 3 cut(s) 68, 512, 1405
BauI CACGAG 1 cut(s) 1404
BbsI GAAGAC 1 cut(s) 239
Bbv12I GWGCWC 2 cut(s) 921, 2013
BbvI GCAGC 8 cut(s) 542, 613, 787, 1054, 1147, 1218, 1367, 1588
BccI CCATC 7 cut(s) 41, 583, 671, 873, 905, 1133, 1313
BceAI ACGGC 1 cut(s) 1475
BciT130I CCWGG 3 cut(s) 243, 287, 1997
BciVI GTATCC 1 cut(s) 1843
BclI TGATCA 1 cut(s) 1734
BcnI CCSGG 1 cut(s) 337
BcoDI GTCTC 4 cut(s) 90, 425, 498, 2074
BfaI CTAG 2 cut(s) 534, 1617
BfmI CTRYAG 5 cut(s) 1023, 1204, 1471, 1716, 1725
BfrI CTTAAG 1 cut(s) 1058
BfuI GTATCC 1 cut(s) 1843
BglII AGATCT 2 cut(s) 1729, 1881
BisI GCNGC 9 cut(s) 556, 602, 801, 1033, 1068, 1161, 1207, 1356, 1602
BlsI GCNGC 9 cut(s) 557, 603, 802, 1034, 1069, 1162, 1208, 1357, 1603
Bme1390I CCNGG 4 cut(s) 243, 287, 337, 1997
Bme18I GGWCC 1 cut(s) 8
BmgT120I GGNCC 5 cut(s) 8, 508, 509, 823, 1918
BmiI GGNNCC 8 cut(s) 9, 35, 510, 776, 1498, 1573, 1919, 2095
BmrFI CCNGG 4 cut(s) 243, 287, 337, 1997
BmrI ACTGGG 1 cut(s) 2020
BmsI GCATC 5 cut(s) 883, 1044, 1244, 1455, 2064
BmuI ACTGGG 1 cut(s) 2020
BpiI GAAGAC 1 cut(s) 239
BpmI CTGGAG 1 cut(s) 136
Bpu10I CCTNAGC 1 cut(s) 1628
BpuEI CTTGAG 4 cut(s) 316, 1074, 1559, 1634
BpuMI CCSGG 1 cut(s) 337
BsaI GGTCTC 1 cut(s) 90
BsaJI CCNNGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
BsaWI WCCGGW 1 cut(s) 1438
BsaXI ACNNNNNCTCC 4 cut(s) 732, 762, 945, 975
Bsc4I CCNNNNNNNGG 3 cut(s) 286, 911, 1295
Bse1I ACTGG 7 cut(s) 204, 261, 275, 722, 759, 1901, 2026
Bse3DI GCAATG 1 cut(s) 1672
BseBI CCWGG 3 cut(s) 243, 287, 1997
BseDI CCNNGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
BseGI GGATG 5 cut(s) 238, 884, 1035, 1125, 1746
BseLI CCNNNNNNNGG 3 cut(s) 286, 911, 1295
BseMI GCAATG 1 cut(s) 1672
BseMII CTCAG 1 cut(s) 1619
BseNI ACTGG 7 cut(s) 204, 261, 275, 722, 759, 1901, 2026
BseRI GAGGAG 2 cut(s) 1278, 2025
BseSI GKGCMC 1 cut(s) 512
BseXI GCAGC 8 cut(s) 542, 613, 787, 1054, 1147, 1218, 1367, 1588
BseYI CCCAGC 1 cut(s) 1914
BshFI GGCC 5 cut(s) 510, 721, 824, 1388, 1920
BshNI GGYRCC 2 cut(s) 33, 1571
BsiHKAI GWGCWC 2 cut(s) 921, 2013
BsiSI CCGG 2 cut(s) 337, 1439
BslI CCNNNNNNNGG 3 cut(s) 286, 911, 1295
BsmAI GTCTC 4 cut(s) 90, 425, 498, 2074
BsmBI CGTCTC 2 cut(s) 425, 498
BsmI GAATGC 1 cut(s) 1275
BsnI GGCC 5 cut(s) 510, 721, 824, 1388, 1920
Bso31I GGTCTC 1 cut(s) 90
Bsp120I GGGCCC 1 cut(s) 508
Bsp1286I GDGCHC 5 cut(s) 68, 512, 921, 1405, 2013
Bsp19I CCATGG 1 cut(s) 2014
BspACI CCGC 3 cut(s) 1030, 1033, 1266
BspANI GGCC 5 cut(s) 510, 721, 824, 1388, 1920
BspCNI CTCAG 1 cut(s) 1620
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 8 cut(s) 9, 35, 510, 776, 1498, 1573, 1919, 2095
BspMAI CTGCAG 2 cut(s) 1208, 1720
BspPI GGATC 4 cut(s) 409, 917, 2088, 2101
BspQI GCTCTTC 1 cut(s) 2001
BspT107I GGYRCC 2 cut(s) 33, 1571
BspTI CTTAAG 1 cut(s) 1058
BspTNI GGTCTC 1 cut(s) 90
BsrDI GCAATG 1 cut(s) 1672
BsrI ACTGG 7 cut(s) 204, 261, 275, 722, 759, 1901, 2026
BssECI CCNNGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
BssSI CACGAG 1 cut(s) 1404
BssT1I CCWWGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
Bst2BI CACGAG 1 cut(s) 1404
Bst2UI CCWGG 3 cut(s) 243, 287, 1997
Bst4CI ACNGT 4 cut(s) 584, 820, 1344, 1369
Bst6I CTCTTC 4 cut(s) 501, 1366, 1891, 2001
BstAFI CTTAAG 1 cut(s) 1058
BstC8I GCNNGC 1 cut(s) 234
BstDEI CTNAG 1 cut(s) 1628
BstDSI CCRYGG 1 cut(s) 2014
BstF5I GGATG 5 cut(s) 238, 884, 1035, 1125, 1746
BstHHI GCGC 2 cut(s) 1470, 1873
BstMAI GTCTC 4 cut(s) 90, 425, 498, 2074
BstMWI GCNNNNNNNGC 6 cut(s) 601, 727, 1215, 1272, 1832, 2030
BstNI CCWGG 3 cut(s) 243, 287, 1997
BstNSI RCATGY 1 cut(s) 236
BstSCI CCNGG 4 cut(s) 241, 285, 335, 1995
BstSFI CTRYAG 5 cut(s) 1023, 1204, 1471, 1716, 1725
BstSLI GKGCMC 1 cut(s) 512
BstV1I GCAGC 8 cut(s) 542, 613, 787, 1054, 1147, 1218, 1367, 1588
BstV2I GAAGAC 1 cut(s) 239
BstX2I RGATCY 4 cut(s) 414, 1729, 1881, 2093
BstXI CCANNNNNNTGG 1 cut(s) 1322
BstYI RGATCY 4 cut(s) 414, 1729, 1881, 2093
BsuI GTATCC 1 cut(s) 1843
BsuRI GGCC 5 cut(s) 510, 721, 824, 1388, 1920
BtgI CCRYGG 1 cut(s) 2014
BtsCI GGATG 5 cut(s) 238, 884, 1035, 1125, 1746
BtsI GCAGTG 2 cut(s) 27, 1611
BtsIMutI CAGTG 8 cut(s) 27, 380, 729, 752, 771, 825, 1611, 1908
Cac8I GCNNGC 1 cut(s) 234
CciI TCATGA 1 cut(s) 981
CfoI GCGC 2 cut(s) 1470, 1873
Cfr13I GGNCC 5 cut(s) 8, 508, 509, 823, 1918
CseI GACGC 1 cut(s) 480
CsiI ACCWGGT 1 cut(s) 285
Csp6I GTAC 3 cut(s) 34, 928, 1572
CspCI CAANNNNNGTGG 2 cut(s) 741, 776
CviAII CATG 6 cut(s) 233, 697, 717, 982, 1144, 2015
CviQI GTAC 3 cut(s) 34, 928, 1572
DdeI CTNAG 1 cut(s) 1628
DraI TTTAAA 2 cut(s) 687, 2058
DrdI GACNNNNNNGTC 1 cut(s) 1651
DseDI GACNNNNNNGTC 1 cut(s) 1651
EaeI YGGCCR 1 cut(s) 719
Eam1104I CTCTTC 4 cut(s) 501, 1366, 1891, 2001
EarI CTCTTC 4 cut(s) 501, 1366, 1891, 2001
EciI GGCGGA 1 cut(s) 1019
Eco130I CCWWGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
Eco24I GRGCYC 3 cut(s) 68, 512, 1405
Eco31I GGTCTC 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 8
Eco57I CTGAAG 2 cut(s) 354, 488
EcoO109I RGGNCCY 4 cut(s) 8, 508, 509, 1918
EcoRII CCWGG 3 cut(s) 241, 285, 1995
EcoT14I CCWWGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
EcoT38I GRGCYC 3 cut(s) 68, 512, 1405
ErhI CCWWGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
Esp3I CGTCTC 2 cut(s) 425, 498
FaeI CATG 6 cut(s) 236, 700, 720, 985, 1147, 2018
FalI AAGNNNNNCTT 4 cut(s) 175, 207, 1589, 1621
FatI CATG 6 cut(s) 232, 696, 716, 981, 1143, 2014
FbaI TGATCA 1 cut(s) 1734
Fnu4HI GCNGC 9 cut(s) 556, 602, 801, 1033, 1068, 1161, 1207, 1356, 1602
FokI GGATG 5 cut(s) 225, 891, 1022, 1112, 1733
FriOI GRGCYC 3 cut(s) 68, 512, 1405
Fsp4HI GCNGC 9 cut(s) 556, 602, 801, 1033, 1068, 1161, 1207, 1356, 1602
FspBI CTAG 2 cut(s) 534, 1617
FspI TGCGCA 1 cut(s) 1872
GlaI GCGC 2 cut(s) 1469, 1872
GluI GCNGC 9 cut(s) 556, 602, 801, 1033, 1068, 1161, 1207, 1356, 1602
GsaI CCCAGC 1 cut(s) 1918
GsuI CTGGAG 1 cut(s) 136
HaeIII GGCC 5 cut(s) 510, 721, 824, 1388, 1920
HapII CCGG 2 cut(s) 337, 1439
HgaI GACGC 1 cut(s) 480
HhaI GCGC 2 cut(s) 1470, 1873
Hin1II CATG 6 cut(s) 236, 700, 720, 985, 1147, 2018
Hin6I GCGC 2 cut(s) 1468, 1871
HinP1I GCGC 2 cut(s) 1468, 1871
HincII GTYRAC 1 cut(s) 148
HindII GTYRAC 1 cut(s) 148
HindIII AAGCTT 1 cut(s) 1699
HinfI GANTC 5 cut(s) 162, 784, 1520, 1541, 2000
HpaII CCGG 2 cut(s) 337, 1439
HphI GGTGA 7 cut(s) 236, 926, 1087, 1160, 1421, 1433, 1777
Hpy166II GTNNAC 4 cut(s) 148, 292, 541, 1644
Hpy188I TCNGA 5 cut(s) 373, 783, 1734, 1755, 2005
Hpy188III TCNNGA 4 cut(s) 251, 476, 982, 1195
Hpy8I GTNNAC 4 cut(s) 148, 292, 541, 1644
Hpy99I CGWCG 1 cut(s) 1554
HpyAV CCTTC 9 cut(s) 48, 136, 372, 378, 401, 788, 939, 1615, 1760
HpyCH4III ACNGT 4 cut(s) 584, 820, 1344, 1369
HpyCH4IV ACGT 1 cut(s) 543
HpyCH4V TGCA 9 cut(s) 93, 236, 974, 1070, 1206, 1235, 1707, 1718, 2077
HpyF10VI GCNNNNNNNGC 6 cut(s) 601, 727, 1215, 1272, 1832, 2030
HpyF3I CTNAG 1 cut(s) 1628
HpySE526I ACGT 1 cut(s) 543
Hsp92II CATG 6 cut(s) 236, 700, 720, 985, 1147, 2018
HspAI GCGC 2 cut(s) 1468, 1871
KpnI GGTACC 2 cut(s) 37, 1575
Ksp22I TGATCA 1 cut(s) 1734
LguI GCTCTTC 1 cut(s) 2001
LmnI GCTCC 5 cut(s) 552, 780, 1291, 1502, 2038
Lsp1109I GCAGC 8 cut(s) 542, 613, 787, 1054, 1147, 1218, 1367, 1588
LweI GCATC 5 cut(s) 883, 1044, 1244, 1455, 2064
MabI ACCWGGT 1 cut(s) 285
MaeI CTAG 2 cut(s) 534, 1617
MaeII ACGT 1 cut(s) 543
MaeIII GTNAC 6 cut(s) 53, 224, 515, 850, 951, 1742
MboII GAAGA 9 cut(s) 239, 488, 1300, 1303, 1353, 1427, 1704, 1878, 2018
MfeI CAATTG 2 cut(s) 1017, 1968
MflI RGATCY 4 cut(s) 414, 1729, 1881, 2093
MhlI GDGCHC 5 cut(s) 68, 512, 921, 1405, 2013
MlsI TGGCCA 1 cut(s) 721
MluNI TGGCCA 1 cut(s) 721
MlyI GAGTC 1 cut(s) 1550
MmeI TCCRAC 2 cut(s) 306, 1827
Mox20I TGGCCA 1 cut(s) 721
MscI TGGCCA 1 cut(s) 721
MseI TTAA 9 cut(s) 182, 275, 624, 686, 831, 1059, 1559, 1659, 2057
MslI CAYNNNNRTG 2 cut(s) 963, 1040
Msp20I TGGCCA 1 cut(s) 721
MspA1I CMGCKG 2 cut(s) 680, 1160
MspCI CTTAAG 1 cut(s) 1058
MspI CCGG 2 cut(s) 337, 1439
MspR9I CCNGG 4 cut(s) 243, 287, 337, 1997
MunI CAATTG 2 cut(s) 1017, 1968
Mva1269I GAATGC 1 cut(s) 1275
MvaI CCWGG 3 cut(s) 243, 287, 1997
MwoI GCNNNNNNNGC 6 cut(s) 601, 727, 1215, 1272, 1832, 2030
NciI CCSGG 1 cut(s) 337
NcoI CCATGG 1 cut(s) 2014
NlaIII CATG 6 cut(s) 236, 700, 720, 985, 1147, 2018
NlaIV GGNNCC 8 cut(s) 9, 35, 510, 776, 1498, 1573, 1919, 2095
NmuCI GTSAC 3 cut(s) 53, 224, 850
NsbI TGCGCA 1 cut(s) 1872
NspI RCATGY 1 cut(s) 236
PaeI GCATGC 1 cut(s) 236
PagI TCATGA 1 cut(s) 981
PciSI GCTCTTC 1 cut(s) 2001
PctI GAATGC 1 cut(s) 1275
PfeI GAWTC 4 cut(s) 162, 784, 1520, 2000
PflMI CCANNNNNTGG 1 cut(s) 911
PkrI GCNGC 9 cut(s) 557, 603, 802, 1034, 1069, 1162, 1208, 1357, 1603
PleI GAGTC 1 cut(s) 1549
PpsI GAGTC 1 cut(s) 1549
PpuMI RGGWCCY 1 cut(s) 8
PshBI ATTAAT 1 cut(s) 624
Psp5II RGGWCCY 1 cut(s) 8
Psp6I CCWGG 3 cut(s) 241, 285, 1995
PspFI CCCAGC 1 cut(s) 1914
PspGI CCWGG 3 cut(s) 241, 285, 1995
PspN4I GGNNCC 8 cut(s) 9, 35, 510, 776, 1498, 1573, 1919, 2095
PspOMI GGGCCC 1 cut(s) 508
PspPI GGNCC 5 cut(s) 8, 508, 509, 823, 1918
PspPPI RGGWCCY 1 cut(s) 8
PstI CTGCAG 2 cut(s) 1208, 1720
PsuI RGATCY 4 cut(s) 414, 1729, 1881, 2093
PvuII CAGCTG 2 cut(s) 680, 1160
RsaI GTAC 3 cut(s) 35, 929, 1573
RsaNI GTAC 3 cut(s) 34, 928, 1572
RseI CAYNNNNRTG 2 cut(s) 963, 1040
SapI GCTCTTC 1 cut(s) 2001
SaqAI TTAA 9 cut(s) 182, 275, 624, 686, 831, 1059, 1559, 1659, 2057
SatI GCNGC 9 cut(s) 556, 602, 801, 1033, 1068, 1161, 1207, 1356, 1602
Sau96I GGNCC 5 cut(s) 8, 508, 509, 823, 1918
SchI GAGTC 1 cut(s) 1550
ScrFI CCNGG 4 cut(s) 243, 287, 337, 1997
SduI GDGCHC 5 cut(s) 68, 512, 921, 1405, 2013
SexAI ACCWGGT 1 cut(s) 285
SfaNI GCATC 5 cut(s) 883, 1044, 1244, 1455, 2064
SfcI CTRYAG 5 cut(s) 1023, 1204, 1471, 1716, 1725
SinI GGWCC 1 cut(s) 8
SmiMI CAYNNNNRTG 2 cut(s) 963, 1040
SmlI CTYRAG 5 cut(s) 295, 1058, 1089, 1538, 1649
SmoI CTYRAG 5 cut(s) 295, 1058, 1089, 1538, 1649
SphI GCATGC 1 cut(s) 236
SsiI CCGC 3 cut(s) 1030, 1033, 1266
SspI AATATT 3 cut(s) 622, 835, 1104
SspMI CTAG 2 cut(s) 534, 1617
StyD4I CCNGG 4 cut(s) 241, 285, 335, 1995
StyI CCWWGG 8 cut(s) 169, 809, 1129, 1477, 1795, 1921, 2014, 2089
TaaI ACNGT 4 cut(s) 584, 820, 1344, 1369
TaiI ACGT 1 cut(s) 546
TaqI TCGA 3 cut(s) 1211, 1638, 1820
TaqII GACCGA 1 cut(s) 663
TauI GCSGC 1 cut(s) 1035
TfiI GAWTC 4 cut(s) 162, 784, 1520, 2000
Tru1I TTAA 9 cut(s) 182, 275, 624, 686, 831, 1059, 1559, 1659, 2057
Tru9I TTAA 9 cut(s) 182, 275, 624, 686, 831, 1059, 1559, 1659, 2057
TscAI CASTG 8 cut(s) 27, 387, 729, 759, 771, 825, 1618, 1908
TseFI GTSAC 3 cut(s) 53, 224, 850
TseI GCWGC 8 cut(s) 555, 601, 800, 1067, 1160, 1206, 1355, 1601
Tsp45I GTSAC 3 cut(s) 53, 224, 850
TspDTI ATGAA 3 cut(s) 644, 1268, 1469
TspGWI ACGGA 3 cut(s) 407, 915, 953
TspRI CASTG 8 cut(s) 27, 387, 729, 759, 771, 825, 1618, 1908
Van91I CCANNNNNTGG 1 cut(s) 911
Vha464I CTTAAG 1 cut(s) 1058
VpaK11BI GGWCC 1 cut(s) 8
VspI ATTAAT 1 cut(s) 624
XapI RAATTY 2 cut(s) 1425, 2103
XceI RCATGY 1 cut(s) 236
XspI CTAG 2 cut(s) 534, 1617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.