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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18310 |
| fragaria_vesca | FvH4_5g25850 |
| malus_domestica | MD04G1026400.v1.1 |
| prunus_persica | Prupe.2G050600_v2.0.a1 |
| pyrus_communis | pycom04g02250 |
| rosa_chinensis | RchiOBHm_Chr6g0264721 RchiOBHm_Chr6g0264731 RchiOBHm_Chr7g0216331 |
| rosa_laevigata | RLG00000002581 |
| rosa_multiflora | Rmu_sc0015060.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00243320 |
| rosa_rugosa | Rorug07G0160000 |
| rosa_samantha | Rh7AG297400 Rh7BG289700 Rh7CG317600 Rh7DG299800 |
| rosa_wichuraiana | Rw7G025300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 718, 1956, 2239 |
| AccII | CGCG | 2 cut(s) | 200, 202 |
| AclI | AACGTT | 1 cut(s) | 2387 |
| AclWI | GGATC | 2 cut(s) | 1247, 1260 |
| AcoI | YGGCCR | 1 cut(s) | 969 |
| AcsI | RAATTY | 9 cut(s) | 264, 340, 486, 851, 1582, 1616, 1997, 2506, 2516 |
| AcuI | CTGAAG | 1 cut(s) | 2193 |
| AcyI | GRCGYC | 1 cut(s) | 222 |
| AfaI | GTAC | 4 cut(s) | 599, 1427, 1592, 2606 |
| AfeI | AGCGCT | 1 cut(s) | 685 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 57, 232, 1244 |
| AjnI | CCWGG | 1 cut(s) | 1883 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 84, 116, 972, 1004 |
| AlwI | GGATC | 2 cut(s) | 1247, 1260 |
| Ama87I | CYCGRG | 4 cut(s) | 1364, 1621, 1646, 1976 |
| Aor51HI | AGCGCT | 1 cut(s) | 685 |
| AoxI | GGCC | 1 cut(s) | 969 |
| ApeKI | GCWGC | 4 cut(s) | 133, 136, 397, 1093 |
| ApoI | RAATTY | 9 cut(s) | 264, 340, 486, 851, 1582, 1616, 1997, 2506, 2516 |
| AspLEI | GCGC | 2 cut(s) | 202, 686 |
| AspS9I | GGNCC | 3 cut(s) | 104, 1229, 2090 |
| AsuC2I | CCSGG | 1 cut(s) | 2073 |
| AsuHPI | GGTGA | 6 cut(s) | 70, 461, 749, 1591, 1839, 2432 |
| AsuII | TTCGAA | 1 cut(s) | 2490 |
| AvaI | CYCGRG | 4 cut(s) | 1364, 1621, 1646, 1976 |
| AvaII | GGWCC | 3 cut(s) | 104, 1229, 2090 |
| AxyI | CCTNAGG | 1 cut(s) | 1486 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1634, 1667 |
| BamHI | GGATCC | 1 cut(s) | 1252 |
| BanII | GRGCYC | 1 cut(s) | 698 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1263, 1295 |
| BauI | CACGAG | 1 cut(s) | 2243 |
| BbsI | GAAGAC | 1 cut(s) | 2274 |
| BbvI | GCAGC | 4 cut(s) | 123, 145, 384, 1105 |
| BccI | CCATC | 2 cut(s) | 130, 2616 |
| BceAI | ACGGC | 1 cut(s) | 984 |
| BciT130I | CCWGG | 1 cut(s) | 1885 |
| BciVI | GTATCC | 1 cut(s) | 554 |
| BclI | TGATCA | 2 cut(s) | 379, 1470 |
| BcnI | CCSGG | 1 cut(s) | 2073 |
| BfaI | CTAG | 1 cut(s) | 1815 |
| BfmI | CTRYAG | 3 cut(s) | 1129, 2369, 2433 |
| BfoI | RGCGCY | 1 cut(s) | 687 |
| BfuI | GTATCC | 1 cut(s) | 554 |
| BglII | AGATCT | 1 cut(s) | 1805 |
| BisI | GCNGC | 5 cut(s) | 13, 134, 137, 398, 1094 |
| BlsI | GCNGC | 5 cut(s) | 14, 135, 138, 399, 1095 |
| Bme1390I | CCNGG | 2 cut(s) | 1885, 2073 |
| Bme18I | GGWCC | 3 cut(s) | 104, 1229, 2090 |
| BmeT110I | CYCGRG | 4 cut(s) | 1364, 1621, 1646, 1976 |
| BmgT120I | GGNCC | 3 cut(s) | 104, 1229, 2090 |
| BmiI | GGNNCC | 2 cut(s) | 695, 1254 |
| BmrFI | CCNGG | 2 cut(s) | 1885, 2073 |
| BmrI | ACTGGG | 1 cut(s) | 327 |
| BmsI | GCATC | 6 cut(s) | 84, 883, 1051, 1665, 1902, 2183 |
| BmuI | ACTGGG | 1 cut(s) | 327 |
| BpiI | GAAGAC | 1 cut(s) | 2274 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1640, 1672 |
| BpmI | CTGGAG | 3 cut(s) | 299, 729, 2380 |
| Bpu14I | TTCGAA | 1 cut(s) | 2490 |
| BpuEI | CTTGAG | 1 cut(s) | 606 |
| BpuMI | CCSGG | 1 cut(s) | 2073 |
| Bsa29I | ATCGAT | 1 cut(s) | 2572 |
| BsaAI | YACGTR | 1 cut(s) | 2405 |
| BsaHI | GRCGYC | 1 cut(s) | 222 |
| BsaJI | CCNNGG | 1 cut(s) | 646 |
| BsaWI | WCCGGW | 2 cut(s) | 416, 2473 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 70, 100, 966, 996, 1578, 1608 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 57, 232, 1244 |
| Bse118I | RCCGGY | 1 cut(s) | 631 |
| Bse1I | ACTGG | 4 cut(s) | 316, 333, 712, 2108 |
| Bse21I | CCTNAGG | 1 cut(s) | 1486 |
| Bse3DI | GCAATG | 2 cut(s) | 1866, 2325 |
| BseBI | CCWGG | 1 cut(s) | 1885 |
| BseCI | ATCGAT | 1 cut(s) | 2572 |
| BseDI | CCNNGG | 1 cut(s) | 646 |
| BseGI | GGATG | 6 cut(s) | 656, 851, 1129, 1481, 1680, 2147 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 57, 232, 1244 |
| BseMI | GCAATG | 2 cut(s) | 1866, 2325 |
| BseMII | CTCAG | 5 cut(s) | 912, 1500, 1926, 2247, 2615 |
| BseNI | ACTGG | 4 cut(s) | 316, 333, 712, 2108 |
| BseRI | GAGGAG | 3 cut(s) | 73, 153, 2324 |
| BseX3I | CGGCCG | 1 cut(s) | 969 |
| BseXI | GCAGC | 4 cut(s) | 123, 145, 384, 1105 |
| BseYI | CCCAGC | 1 cut(s) | 1682 |
| Bsh1236I | CGCG | 2 cut(s) | 200, 202 |
| Bsh1285I | CGRYCG | 2 cut(s) | 972, 2478 |
| BshFI | GGCC | 1 cut(s) | 971 |
| BshVI | ATCGAT | 1 cut(s) | 2572 |
| BsiEI | CGRYCG | 2 cut(s) | 972, 2478 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1364, 1621, 1646, 1976 |
| BsiSI | CCGG | 7 cut(s) | 219, 417, 632, 972, 2041, 2073, 2474 |
| BslFI | GGGAC | 3 cut(s) | 75, 209, 382 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 57, 232, 1244 |
| BsmBI | CGTCTC | 2 cut(s) | 220, 1618 |
| BsmFI | GGGAC | 3 cut(s) | 75, 209, 382 |
| BsmI | GAATGC | 2 cut(s) | 1207, 1919 |
| BsnI | GGCC | 1 cut(s) | 971 |
| BsoBI | CYCGRG | 4 cut(s) | 1364, 1621, 1646, 1976 |
| Bsp119I | TTCGAA | 1 cut(s) | 2490 |
| Bsp1286I | GDGCHC | 1 cut(s) | 698 |
| BspANI | GGCC | 1 cut(s) | 971 |
| BspCNI | CTCAG | 5 cut(s) | 913, 1499, 1927, 2246, 2614 |
| BspDI | ATCGAT | 1 cut(s) | 2572 |
| BspFNI | CGCG | 2 cut(s) | 200, 202 |
| BspLI | GGNNCC | 2 cut(s) | 695, 1254 |
| BspPI | GGATC | 2 cut(s) | 1247, 1260 |
| BspQI | GCTCTTC | 1 cut(s) | 146 |
| BspT104I | TTCGAA | 1 cut(s) | 2490 |
| BsrDI | GCAATG | 2 cut(s) | 1866, 2325 |
| BsrFI | RCCGGY | 1 cut(s) | 631 |
| BsrI | ACTGG | 4 cut(s) | 316, 333, 712, 2108 |
| BssAI | RCCGGY | 1 cut(s) | 631 |
| BssECI | CCNNGG | 1 cut(s) | 646 |
| BssNI | GRCGYC | 1 cut(s) | 222 |
| BssSI | CACGAG | 1 cut(s) | 2243 |
| Bst2BI | CACGAG | 1 cut(s) | 2243 |
| Bst2UI | CCWGG | 1 cut(s) | 1885 |
| Bst4CI | ACNGT | 9 cut(s) | 289, 602, 737, 1016, 1590, 1971, 2007, 2297, 2457 |
| Bst6I | CTCTTC | 6 cut(s) | 146, 151, 1365, 1724, 1755, 2437 |
| BstACI | GRCGYC | 1 cut(s) | 222 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 72 |
| BstBAI | YACGTR | 1 cut(s) | 2405 |
| BstBI | TTCGAA | 1 cut(s) | 2490 |
| BstC8I | GCNNGC | 3 cut(s) | 1564, 1680, 1917 |
| BstDEI | CTNAG | 6 cut(s) | 921, 1486, 1935, 1984, 2233, 2601 |
| BstF5I | GGATG | 6 cut(s) | 656, 851, 1129, 1481, 1680, 2147 |
| BstFNI | CGCG | 2 cut(s) | 200, 202 |
| BstH2I | RGCGCY | 1 cut(s) | 687 |
| BstHHI | GCGC | 2 cut(s) | 202, 686 |
| BstMCI | CGRYCG | 2 cut(s) | 972, 2478 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 72, 1752, 2046 |
| BstNI | CCWGG | 1 cut(s) | 1885 |
| BstSCI | CCNGG | 2 cut(s) | 1883, 2071 |
| BstSFI | CTRYAG | 3 cut(s) | 1129, 2369, 2433 |
| BstUI | CGCG | 2 cut(s) | 200, 202 |
| BstV1I | GCAGC | 4 cut(s) | 123, 145, 384, 1105 |
| BstV2I | GAAGAC | 1 cut(s) | 2274 |
| BstX2I | RGATCY | 2 cut(s) | 1252, 1805 |
| BstYI | RGATCY | 2 cut(s) | 1252, 1805 |
| BstZI | CGGCCG | 1 cut(s) | 969 |
| Bsu15I | ATCGAT | 1 cut(s) | 2572 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1486 |
| BsuI | GTATCC | 1 cut(s) | 554 |
| BsuRI | GGCC | 1 cut(s) | 971 |
| BsuTUI | ATCGAT | 1 cut(s) | 2572 |
| BtsCI | GGATG | 6 cut(s) | 656, 851, 1129, 1481, 1680, 2147 |
| BtsI | GCAGTG | 1 cut(s) | 937 |
| BtsIMutI | CAGTG | 4 cut(s) | 831, 918, 937, 2302 |
| Cac8I | GCNNGC | 3 cut(s) | 1564, 1680, 1917 |
| CfoI | GCGC | 2 cut(s) | 202, 686 |
| Cfr10I | RCCGGY | 1 cut(s) | 631 |
| Cfr13I | GGNCC | 3 cut(s) | 104, 1229, 2090 |
| ClaI | ATCGAT | 1 cut(s) | 2572 |
| CseI | GACGC | 2 cut(s) | 72, 211 |
| CsiI | ACCWGGT | 1 cut(s) | 1883 |
| Csp6I | GTAC | 4 cut(s) | 598, 1426, 1591, 2605 |
| CviAII | CATG | 4 cut(s) | 701, 1097, 1757, 2126 |
| CviQI | GTAC | 4 cut(s) | 598, 1426, 1591, 2605 |
| DdeI | CTNAG | 6 cut(s) | 921, 1486, 1935, 1984, 2233, 2601 |
| DraI | TTTAAA | 2 cut(s) | 262, 1527 |
| EaeI | YGGCCR | 1 cut(s) | 969 |
| EagI | CGGCCG | 1 cut(s) | 969 |
| Eam1104I | CTCTTC | 6 cut(s) | 146, 151, 1365, 1724, 1755, 2437 |
| EarI | CTCTTC | 6 cut(s) | 146, 151, 1365, 1724, 1755, 2437 |
| EclXI | CGGCCG | 1 cut(s) | 969 |
| Eco24I | GRGCYC | 1 cut(s) | 698 |
| Eco47I | GGWCC | 3 cut(s) | 104, 1229, 2090 |
| Eco47III | AGCGCT | 1 cut(s) | 685 |
| Eco52I | CGGCCG | 1 cut(s) | 969 |
| Eco57I | CTGAAG | 1 cut(s) | 2193 |
| Eco81I | CCTNAGG | 1 cut(s) | 1486 |
| Eco88I | CYCGRG | 4 cut(s) | 1364, 1621, 1646, 1976 |
| EcoRI | GAATTC | 1 cut(s) | 1997 |
| EcoRII | CCWGG | 1 cut(s) | 1883 |
| EcoT38I | GRGCYC | 1 cut(s) | 698 |
| Esp3I | CGTCTC | 2 cut(s) | 220, 1618 |
| FaeI | CATG | 4 cut(s) | 704, 1100, 1760, 2129 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1100, 1132, 2017, 2049, 2520, 2552, 2580, 2612 |
| FaqI | GGGAC | 3 cut(s) | 75, 209, 382 |
| FatI | CATG | 4 cut(s) | 700, 1096, 1756, 2125 |
| FauI | CCCGC | 3 cut(s) | 205, 997, 2225 |
| FbaI | TGATCA | 2 cut(s) | 379, 1470 |
| FblI | GTMKAC | 3 cut(s) | 718, 1956, 2239 |
| Fnu4HI | GCNGC | 5 cut(s) | 13, 134, 137, 398, 1094 |
| FokI | GGATG | 6 cut(s) | 663, 858, 1136, 1468, 1687, 2154 |
| FriOI | GRGCYC | 1 cut(s) | 698 |
| Fsp4HI | GCNGC | 5 cut(s) | 13, 134, 137, 398, 1094 |
| FspBI | CTAG | 1 cut(s) | 1815 |
| GlaI | GCGC | 2 cut(s) | 201, 685 |
| GluI | GCNGC | 5 cut(s) | 13, 134, 137, 398, 1094 |
| GsaI | CCCAGC | 1 cut(s) | 1686 |
| GsuI | CTGGAG | 3 cut(s) | 299, 729, 2380 |
| HaeII | RGCGCY | 1 cut(s) | 687 |
| HaeIII | GGCC | 1 cut(s) | 971 |
| HapII | CCGG | 7 cut(s) | 219, 417, 632, 972, 2041, 2073, 2474 |
| HgaI | GACGC | 2 cut(s) | 72, 211 |
| HhaI | GCGC | 2 cut(s) | 202, 686 |
| Hin1I | GRCGYC | 1 cut(s) | 222 |
| Hin1II | CATG | 4 cut(s) | 704, 1100, 1760, 2129 |
| Hin6I | GCGC | 2 cut(s) | 200, 684 |
| HinP1I | GCGC | 2 cut(s) | 200, 684 |
| HincII | GTYRAC | 2 cut(s) | 1479, 2240 |
| HindII | GTYRAC | 2 cut(s) | 1479, 2240 |
| HindIII | AAGCTT | 2 cut(s) | 1493, 1891 |
| HpaI | GTTAAC | 1 cut(s) | 1479 |
| HpaII | CCGG | 7 cut(s) | 219, 417, 632, 972, 2041, 2073, 2474 |
| HphI | GGTGA | 6 cut(s) | 70, 461, 749, 1591, 1839, 2432 |
| Hpy166II | GTNNAC | 6 cut(s) | 425, 719, 1464, 1479, 1957, 2240 |
| Hpy8I | GTNNAC | 6 cut(s) | 425, 719, 1464, 1479, 1957, 2240 |
| Hpy99I | CGWCG | 2 cut(s) | 28, 235 |
| HpyAV | CCTTC | 9 cut(s) | 440, 1242, 1243, 1248, 1266, 1439, 2043, 2056, 2411 |
| HpyCH4III | ACNGT | 9 cut(s) | 289, 602, 737, 1016, 1590, 1971, 2007, 2297, 2457 |
| HpyCH4IV | ACGT | 7 cut(s) | 453, 564, 1627, 2321, 2387, 2404, 2549 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 72, 1752, 2046 |
| HpyF3I | CTNAG | 6 cut(s) | 921, 1486, 1935, 1984, 2233, 2601 |
| HpySE526I | ACGT | 7 cut(s) | 453, 564, 1627, 2321, 2387, 2404, 2549 |
| Hsp92I | GRCGYC | 1 cut(s) | 222 |
| Hsp92II | CATG | 4 cut(s) | 704, 1100, 1760, 2129 |
| HspAI | GCGC | 2 cut(s) | 200, 684 |
| Ksp22I | TGATCA | 2 cut(s) | 379, 1470 |
| KspAI | GTTAAC | 1 cut(s) | 1479 |
| LguI | GCTCTTC | 1 cut(s) | 146 |
| LmnI | GCTCC | 5 cut(s) | 524, 693, 974, 1276, 2065 |
| Lsp1109I | GCAGC | 4 cut(s) | 123, 145, 384, 1105 |
| LweI | GCATC | 6 cut(s) | 84, 883, 1051, 1665, 1902, 2183 |
| MabI | ACCWGGT | 1 cut(s) | 1883 |
| MaeI | CTAG | 1 cut(s) | 1815 |
| MaeII | ACGT | 7 cut(s) | 453, 564, 1627, 2321, 2387, 2404, 2549 |
| MaeIII | GTNAC | 7 cut(s) | 430, 449, 515, 703, 1010, 2007, 2380 |
| MflI | RGATCY | 2 cut(s) | 1252, 1805 |
| MhlI | GDGCHC | 1 cut(s) | 698 |
| MlyI | GAGTC | 6 cut(s) | 122, 626, 769, 820, 967, 1364 |
| MmeI | TCCRAC | 3 cut(s) | 213, 839, 1285 |
| MspA1I | CMGCKG | 2 cut(s) | 136, 2354 |
| MspI | CCGG | 7 cut(s) | 219, 417, 632, 972, 2041, 2073, 2474 |
| MspR9I | CCNGG | 2 cut(s) | 1885, 2073 |
| Mva1269I | GAATGC | 2 cut(s) | 1207, 1919 |
| MvaI | CCWGG | 1 cut(s) | 1885 |
| MvnI | CGCG | 2 cut(s) | 200, 202 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 72, 1752, 2046 |
| NciI | CCSGG | 1 cut(s) | 2073 |
| NlaIII | CATG | 4 cut(s) | 704, 1100, 1760, 2129 |
| NlaIV | GGNNCC | 2 cut(s) | 695, 1254 |
| NmuCI | GTSAC | 5 cut(s) | 430, 449, 515, 1010, 2380 |
| NspV | TTCGAA | 1 cut(s) | 2490 |
| PaeR7I | CTCGAG | 2 cut(s) | 1646, 1976 |
| PciSI | GCTCTTC | 1 cut(s) | 146 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 285, 450, 584, 1410, 2517, 2546 |
| PctI | GAATGC | 2 cut(s) | 1207, 1919 |
| PkrI | GCNGC | 5 cut(s) | 14, 135, 138, 399, 1095 |
| PleI | GAGTC | 6 cut(s) | 122, 625, 768, 819, 966, 1363 |
| PpsI | GAGTC | 6 cut(s) | 122, 625, 768, 819, 966, 1363 |
| Ppu21I | YACGTR | 1 cut(s) | 2405 |
| Psp1406I | AACGTT | 1 cut(s) | 2387 |
| Psp6I | CCWGG | 1 cut(s) | 1883 |
| PspFI | CCCAGC | 1 cut(s) | 1682 |
| PspGI | CCWGG | 1 cut(s) | 1883 |
| PspN4I | GGNNCC | 2 cut(s) | 695, 1254 |
| PspPI | GGNCC | 3 cut(s) | 104, 1229, 2090 |
| PspXI | VCTCGAGB | 1 cut(s) | 1646 |
| PsuI | RGATCY | 2 cut(s) | 1252, 1805 |
| PvuII | CAGCTG | 2 cut(s) | 136, 2354 |
| RsaI | GTAC | 4 cut(s) | 599, 1427, 1592, 2606 |
| RsaNI | GTAC | 4 cut(s) | 598, 1426, 1591, 2605 |
| SalI | GTCGAC | 1 cut(s) | 2238 |
| SapI | GCTCTTC | 1 cut(s) | 146 |
| SatI | GCNGC | 5 cut(s) | 13, 134, 137, 398, 1094 |
| Sau96I | GGNCC | 3 cut(s) | 104, 1229, 2090 |
| SchI | GAGTC | 6 cut(s) | 122, 626, 769, 820, 967, 1364 |
| ScrFI | CCNGG | 2 cut(s) | 1885, 2073 |
| SduI | GDGCHC | 1 cut(s) | 698 |
| SexAI | ACCWGGT | 1 cut(s) | 1883 |
| SfaNI | GCATC | 6 cut(s) | 84, 883, 1051, 1665, 1902, 2183 |
| SfcI | CTRYAG | 3 cut(s) | 1129, 2369, 2433 |
| Sfr274I | CTCGAG | 2 cut(s) | 1646, 1976 |
| SfuI | TTCGAA | 1 cut(s) | 2490 |
| SinI | GGWCC | 3 cut(s) | 104, 1229, 2090 |
| SlaI | CTCGAG | 2 cut(s) | 1646, 1976 |
| SmlI | CTYRAG | 3 cut(s) | 621, 1646, 1976 |
| SmoI | CTYRAG | 3 cut(s) | 621, 1646, 1976 |
| SspMI | CTAG | 1 cut(s) | 1815 |
| StyD4I | CCNGG | 2 cut(s) | 1883, 2071 |
| TaaI | ACNGT | 9 cut(s) | 289, 602, 737, 1016, 1590, 1971, 2007, 2297, 2457 |
| TaiI | ACGT | 7 cut(s) | 456, 567, 1630, 2324, 2390, 2407, 2552 |
| TaqII | GACCGA | 2 cut(s) | 876, 2286 |
| TauI | GCSGC | 1 cut(s) | 15 |
| TscAI | CASTG | 4 cut(s) | 831, 925, 937, 2302 |
| TseFI | GTSAC | 5 cut(s) | 430, 449, 515, 1010, 2380 |
| TseI | GCWGC | 4 cut(s) | 133, 136, 397, 1093 |
| Tsp45I | GTSAC | 5 cut(s) | 430, 449, 515, 1010, 2380 |
| TspDTI | ATGAA | 7 cut(s) | 69, 581, 1773, 2295, 2314, 2540, 2571 |
| TspGWI | ACGGA | 6 cut(s) | 12, 202, 219, 1502, 2154, 2555 |
| TspRI | CASTG | 4 cut(s) | 831, 925, 937, 2302 |
| VpaK11BI | GGWCC | 3 cut(s) | 104, 1229, 2090 |
| XapI | RAATTY | 9 cut(s) | 264, 340, 486, 851, 1582, 1616, 1997, 2506, 2516 |
| XhoI | CTCGAG | 2 cut(s) | 1646, 1976 |
| XmiI | GTMKAC | 3 cut(s) | 718, 1956, 2239 |
| XspI | CTAG | 1 cut(s) | 1815 |