Rw7G025300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0014015
Physical Location & Seq
Forward (+)
31639303 .. 31642051
2749 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G025300.1

Sequence Viewer

Length: 2640 bp
ATGGACAGCATACCCGAAGAATGGAAATCTCTCTTCCCAATCTCATCAGTCTTCCAGCCTCCACTTCTCATTTCAAACCCTTCAATATTGGGTCCTCTAATCTTCAACCCAAAACCCAACAGCACTACTCTCCTTTTCTCTTGCCCCACTCTCCTGCCACCTCTCACTCCTTTACCTCATCTCTCTCTACCGCGTTTCCTCTTGACCTCCTCACCAGAATCTGCTCCTCTTCCCTCTACCTCTTCCTCCATAGCCTCCTTCTTGGGCCCTCATCAGTACAAATATGACATTCTTTCCTCTTTCCGAAACCGTCTCGAATTCCTTCAATGCCCACAAACTAACACTATTCTTATATTTTTCCCTACCGGTGAGAATTCTGACCAAGTTGGGTTGTTCAAGCTGGTATTAAAAGAATCGACTTTCGACGTTAAAGTTTACAATCTCACTACGAGGTGTCAGTTCAAATACCAGATTTTAAGGATTTCTGTGAATCCCCTTCCTAGCTTATCCAATTTAAGAGGTAATGGTCCTGTTAACATTGGATATTTATTGGCTTCAACTTTGTACTCTGTGCATTGGTTTATTGTAAAGGTTGGAGATTTTGGTCCGAATTCTTATAGTGTTAGGTTAGTGTATTTGGGTGGTAGGGTCTTCAAGGCTTGCTGTGTTGTACATGCGTGCTGGAGTCCGCATGTGCTGGAAGAGAGTGTGGTTTTGTTAGAGAATGGTGCTTTATTCTTGTTTGATTTGGAATCTCGTCTAGACAACGATATTTCAAATACATATTTTAAAGGGACCAGATTGAAAGTCCTTTGGGACAATAATGGTTATGGTAGTTCTGGAAATTATAAGTGGTTGAGTTGTGAGTTCAGTTGGCATCCTAGAGTTTTGATTGTTGCACGTTCAGATGCAATTTTCTTAGTTGATTTGAGGTTCAATGAATGTAGTGTGACTTGTTTGATGAAGATTGAGATGTTGCATATGTATGCCCCGATTGAAAAGGAGCAGTTCCGTGTGCTTTCAACGACTAGTTCTGATAGTTTTCACTTTGTTTTGGCTTCCGACAGTTTGTTACTCCTTTGTGATGTGCGCAAGCCATTGATGCCGGTGTTGCAATGGGCTCATAGCATCGACAAAGCAAGTTATATTGATGTTTTTAGACTGTCAGAATTGAGGTCATACTCGAAGGATGACACATATAAATGGCCTTCGGATTCTGGTTTTTGCATTATCTTGGGTTCATTTTGGAATTGTGAGTTCAATATCTTTTCCTATGGACCTTCCCTCCCAATGCCAATAGGATCAGTAGCTTCAAAAATAATGGAGCTTAGAAAATCCTTTTATGCCTGGGAGCTCCCTTCAGATCTTTTACTGTCTAGTCAGGAATGCCATTGTGGAAATTGTCTTTGGATTGATTGGCAGCGCAAAAAAGAGATAGTGCTGGGCTTCGGTATTGTAAACAAGGACTTGTCTTCTCTGCTTTCTGAACCAATGAATTTGCTAGAATTACAGAGATATTGTGCATCATGGGATTCTATAAAAGAAGTAGAAGAATCACATGGAGAGTTGCTGCATTTTAAGGATCATTTGCTCTACTCCCTCGAACATGAGGAATACAAATTTCCTAGGAGATTTAAGTACCTTGAACTTGACTACCTCTGTAGTTATCTAAATGGCAATCTTGATGAAGTCTTGGATGCAAAAATAAAAAAGCCCTCTAAGGTTCCTCAAGGGAATGAACTTTTTAGCCCTGAATTTCATGAAATATTATGCAAGAAGTTACATGAATGCGGTTTTGGTCAGTTAAGATCATCTCCTGCTATTACAATTGTTTTAAATGACATCAGCTTGCCAGCAAGCATACATGAAGTTGTTTTGAGGAGATTGTGGTCAGAGTTACCCATGGAGCTTCTGCAATTGGCTTTTTCTAACTATCCTGAAATTCTTGAAGTGCTTGTGAACAAAAAGAGGGTGGCTTTGGAATTCTCTGCTGTACCAGACCTATCTCAGTTGCCTCCTTTCATTTTAAGGAGGCCTAGGAAGCCGTTTTGCCGCAGCAATAAGTGGTCAAAGAAAGTGCAACCTGGTGAAGCCCTTGTGGGTCCCGTACTTCCTCTTCCTCTGTTGCTTACACTTCATGAATTTCGTAATGGGTGTCCAAATTCAGAGGAACAATCAGGCAGATTTTCAGTAGAGGCAGAGCTTAGCCGCAGCTGTGATGAGGTCATGCAGGTTGCCAGCGAAATGGCTGTTTCCAATTCTGATCAAGAGGTTCTTGATGATCAAGTGACTTCCCTTGCTAGTGATGGAGAAGAGAAATGGGGCGACTCTCAAAGGTCAAAACCTTTCTTTTTATATCAGCCGGGAAAATCTCTTTATAAGAATGACAAGTTTGACACCTTGATTTCTAAAGTGTCAGAGAAGAAGCAAACATCCAATGACATTAGCGATAGCGTTGGACCAGAACTCTTTGATGATCTTTGCCCTGTGGAATTGAGATTTGATGCTTGTCCCATGAAGTTTGAGTCGAAGGAACTGAGGGAATATAATATATTGAAGAGGCAATTCTTAGAATGGCAAAATAGGTTTGACTTGTATAAAGACTTCCGCTCTCGGATTGAATCAAAATCTAATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

879

Amino Acids

100.54

Weight (kDa)

5.87

Isoelectric Point (pI)

52.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF1C_beta-prop PF20641 227 - 323 5.1e-06 TAF1C, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014015)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18310
fragaria_vesca FvH4_5g25850
malus_domestica MD04G1026400.v1.1
prunus_persica Prupe.2G050600_v2.0.a1
pyrus_communis pycom04g02250
rosa_chinensis RchiOBHm_Chr6g0264721 RchiOBHm_Chr6g0264731 RchiOBHm_Chr7g0216331
rosa_laevigata RLG00000002581
rosa_multiflora Rmu_sc0015060.1_g000019
rosa_roxburghii Rroxscaffold_3G00243320
rosa_rugosa Rorug07G0160000
rosa_samantha Rh7AG297400 Rh7BG289700 Rh7CG317600 Rh7DG299800
rosa_wichuraiana Rw7G025300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 849, 2379
Acc16I TGCGCA 1 cut(s) 1091
Acc36I ACCTGC 1 cut(s) 2221
AccBSI CCGCTC 1 cut(s) 2610
AccII CGCG 1 cut(s) 193
AciI CCGC 6 cut(s) 191, 689, 1791, 2053, 2209, 2608
AclWI GGATC 2 cut(s) 1309, 1590
AcuI CTGAAG 1 cut(s) 1344
AfaI GTAC 6 cut(s) 278, 566, 672, 1640, 1995, 2109
AfiI CCNNNNNNNGG 1 cut(s) 21
AgeI ACCGGT 1 cut(s) 365
AhlI ACTAGT 1 cut(s) 1028
AjnI CCWGG 2 cut(s) 1346, 2083
AjuI GAANNNNNNNTTGG 4 cut(s) 1390, 1422, 1779, 1811
AluBI AGCT 9 cut(s) 400, 504, 1310, 1327, 1354, 1848, 1909, 2203, 2214
AluI AGCT 9 cut(s) 400, 504, 1310, 1327, 1354, 1848, 1909, 2203, 2214
Alw21I GWGCWC 1 cut(s) 1356
Alw26I GTCTC 1 cut(s) 317
AlwI GGATC 2 cut(s) 1309, 1590
AlwNI CAGNNNCTG 1 cut(s) 221
AoxI GGCC 3 cut(s) 265, 1205, 2033
ApaI GGGCCC 1 cut(s) 269
ApeKI GCWGC 4 cut(s) 1420, 1570, 2055, 2211
AsiGI ACCGGT 1 cut(s) 365
Asp700I GAANNNNTTC 1 cut(s) 321
AspA2I CCTAGG 2 cut(s) 1625, 2036
AspLEI GCGC 2 cut(s) 1092, 1425
AspS9I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2102, 2459
AsuC2I CCSGG 1 cut(s) 2364
AsuHPI GGTGA 3 cut(s) 204, 380, 2099
AvaII GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2102, 2459
AvrII CCTAGG 2 cut(s) 1625, 2036
BaeGI GKGCMC 1 cut(s) 269
BanII GRGCYC 3 cut(s) 269, 1123, 1356
BarI GAAGNNNNNNTAC 4 cut(s) 2100, 2132, 2588, 2620
BbsI GAAGAC 3 cut(s) 43, 643, 1464
Bbv12I GWGCWC 1 cut(s) 1356
BbvI GCAGC 4 cut(s) 1432, 1557, 2067, 2223
BccI CCATC 1 cut(s) 2300
BceAI ACGGC 1 cut(s) 2029
BciT130I CCWGG 2 cut(s) 1348, 2085
BclI TGATCA 2 cut(s) 2263, 2281
BcnI CCSGG 1 cut(s) 2364
BcoDI GTCTC 1 cut(s) 317
BcuI ACTAGT 1 cut(s) 1028
BfaI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1502, 1626, 2037, 2301
BfmI CTRYAG 1 cut(s) 1660
BfuAI ACCTGC 1 cut(s) 2221
BglII AGATCT 1 cut(s) 1363
BisI GCNGC 6 cut(s) 1421, 1571, 2053, 2056, 2209, 2212
BlnI CCTAGG 2 cut(s) 1625, 2036
BlpI GCTNAGC 1 cut(s) 2204
BlsI GCNGC 6 cut(s) 1422, 1572, 2054, 2057, 2210, 2213
Bme1390I CCNGG 3 cut(s) 1348, 2085, 2364
Bme18I GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2102, 2459
BmgT120I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2102, 2459
BmiI GGNNCC 6 cut(s) 93, 267, 796, 1725, 2103, 2104
BmrFI CCNGG 3 cut(s) 1348, 2085, 2364
BmsI GCATC 7 cut(s) 886, 898, 1092, 1137, 1532, 1687, 2494
BpiI GAAGAC 3 cut(s) 43, 643, 1464
BpmI CTGGAG 1 cut(s) 703
Bpu1102I GCTNAGC 1 cut(s) 2204
BpuEI CTTGAG 1 cut(s) 1713
BpuMI CCSGG 1 cut(s) 2364
BsaJI CCNNGG 4 cut(s) 1347, 1625, 1902, 2036
BsaWI WCCGGW 1 cut(s) 365
BsaXI ACNNNNNCTCC 2 cut(s) 1269, 1299
Bsc4I CCNNNNNNNGG 1 cut(s) 21
Bse118I RCCGGY 2 cut(s) 365, 1105
Bse3DI GCAATG 1 cut(s) 1121
BseBI CCWGG 2 cut(s) 1348, 2085
BseDI CCNNGG 4 cut(s) 1347, 1625, 1902, 2036
BseGI GGATG 4 cut(s) 877, 1195, 1702, 2432
BseLI CCNNNNNNNGG 1 cut(s) 21
BseMI GCAATG 1 cut(s) 1121
BseMII CTCAG 2 cut(s) 2021, 2528
BseRI GAGGAG 3 cut(s) 199, 216, 1894
BseSI GKGCMC 1 cut(s) 269
BseXI GCAGC 4 cut(s) 1432, 1557, 2067, 2223
BseYI CCCAGC 1 cut(s) 1441
Bsh1236I CGCG 1 cut(s) 193
BshFI GGCC 3 cut(s) 267, 1207, 2035
BshTI ACCGGT 1 cut(s) 365
BsiHKAI GWGCWC 1 cut(s) 1356
BsiSI CCGG 3 cut(s) 366, 1106, 2363
BslFI GGGAC 4 cut(s) 808, 830, 2088, 2496
BslI CCNNNNNNNGG 1 cut(s) 21
BsmAI GTCTC 1 cut(s) 317
BsmBI CGTCTC 1 cut(s) 317
BsmFI GGGAC 4 cut(s) 808, 830, 2088, 2496
BsmI GAATGC 2 cut(s) 1391, 1793
BsnI GGCC 3 cut(s) 267, 1207, 2035
Bsp120I GGGCCC 1 cut(s) 265
Bsp1286I GDGCHC 3 cut(s) 269, 1123, 1356
Bsp1407I TGTACA 1 cut(s) 670
Bsp143I GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
Bsp1720I GCTNAGC 1 cut(s) 2204
Bsp19I CCATGG 1 cut(s) 1902
BspACI CCGC 6 cut(s) 191, 689, 1791, 2053, 2209, 2608
BspANI GGCC 3 cut(s) 267, 1207, 2035
BspCNI CTCAG 2 cut(s) 2020, 2529
BspFNI CGCG 1 cut(s) 193
BspHI TCATGA 2 cut(s) 1759, 2137
BspLI GGNNCC 6 cut(s) 93, 267, 796, 1725, 2103, 2104
BspMI ACCTGC 1 cut(s) 2221
BspPI GGATC 2 cut(s) 1309, 1590
BsrBI CCGCTC 1 cut(s) 2610
BsrDI GCAATG 1 cut(s) 1121
BsrFI RCCGGY 2 cut(s) 365, 1105
BsrGI TGTACA 1 cut(s) 670
BssAI RCCGGY 2 cut(s) 365, 1105
BssECI CCNNGG 4 cut(s) 1347, 1625, 1902, 2036
BssMI GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
BssT1I CCWWGG 3 cut(s) 1625, 1902, 2036
Bst2UI CCWGG 2 cut(s) 1348, 2085
Bst4CI ACNGT 4 cut(s) 311, 1067, 1164, 1374
Bst6I CTCTTC 7 cut(s) 38, 234, 247, 696, 2121, 2307, 2552
BstAUI TGTACA 1 cut(s) 670
BstC8I GCNNGC 7 cut(s) 661, 679, 1094, 1850, 1854, 1858, 2239
BstDEI CTNAG 7 cut(s) 919, 1328, 1719, 2007, 2204, 2537, 2569
BstDSI CCRYGG 1 cut(s) 1902
BstF5I GGATG 4 cut(s) 877, 1195, 1702, 2432
BstFNI CGCG 1 cut(s) 193
BstHHI GCGC 2 cut(s) 1092, 1425
BstKTI GATC 7 cut(s) 1304, 1366, 1585, 1811, 2266, 2284, 2479
BstMAI GTCTC 1 cut(s) 317
BstMBI GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
BstMWI GCNNNNNNNGC 3 cut(s) 1102, 1111, 2041
BstNI CCWGG 2 cut(s) 1348, 2085
BstNSI RCATGY 2 cut(s) 677, 695
BstSCI CCNGG 3 cut(s) 1346, 2083, 2362
BstSFI CTRYAG 1 cut(s) 1660
BstSLI GKGCMC 1 cut(s) 269
BstUI CGCG 1 cut(s) 193
BstV1I GCAGC 4 cut(s) 1432, 1557, 2067, 2223
BstV2I GAAGAC 3 cut(s) 43, 643, 1464
BstX2I RGATCY 1 cut(s) 1363
BstXI CCANNNNNNTGG 1 cut(s) 2245
BstYI RGATCY 1 cut(s) 1363
BsuRI GGCC 3 cut(s) 267, 1207, 2035
BtgI CCRYGG 1 cut(s) 1902
BtsCI GGATG 4 cut(s) 877, 1195, 1702, 2432
BveI ACCTGC 1 cut(s) 2221
Cac8I GCNNGC 7 cut(s) 661, 679, 1094, 1850, 1854, 1858, 2239
CaiI CAGNNNCTG 1 cut(s) 221
CciI TCATGA 2 cut(s) 1759, 2137
CfoI GCGC 2 cut(s) 1092, 1425
Cfr10I RCCGGY 2 cut(s) 365, 1105
Cfr13I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2102, 2459
CsiI ACCWGGT 1 cut(s) 2083
Csp6I GTAC 6 cut(s) 277, 565, 671, 1639, 1994, 2108
CspAI ACCGGT 1 cut(s) 365
CviQI GTAC 6 cut(s) 277, 565, 671, 1639, 1994, 2108
DdeI CTNAG 7 cut(s) 919, 1328, 1719, 2007, 2204, 2537, 2569
DpnI GATC 7 cut(s) 1303, 1365, 1584, 1810, 2265, 2283, 2478
DpnII GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
DraI TTTAAA 2 cut(s) 790, 1836
Eam1104I CTCTTC 7 cut(s) 38, 234, 247, 696, 2121, 2307, 2552
EarI CTCTTC 7 cut(s) 38, 234, 247, 696, 2121, 2307, 2552
Ecl136II GAGCTC 1 cut(s) 1354
Eco130I CCWWGG 3 cut(s) 1625, 1902, 2036
Eco147I AGGCCT 1 cut(s) 2035
Eco24I GRGCYC 3 cut(s) 269, 1123, 1356
Eco47I GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2102, 2459
Eco53kI GAGCTC 1 cut(s) 1354
Eco57I CTGAAG 1 cut(s) 1344
EcoICRI GAGCTC 1 cut(s) 1354
EcoO109I RGGNCCY 3 cut(s) 92, 266, 2102
EcoRI GAATTC 4 cut(s) 317, 373, 610, 1982
EcoRII CCWGG 2 cut(s) 1346, 2083
EcoT14I CCWWGG 3 cut(s) 1625, 1902, 2036
EcoT38I GRGCYC 3 cut(s) 269, 1123, 1356
ErhI CCWWGG 3 cut(s) 1625, 1902, 2036
Esp3I CGTCTC 1 cut(s) 317
FalI AAGNNNNNCTT 2 cut(s) 2259, 2291
FaqI GGGAC 4 cut(s) 808, 830, 2088, 2496
FauNDI CATATG 1 cut(s) 981
FbaI TGATCA 2 cut(s) 2263, 2281
Fnu4HI GCNGC 6 cut(s) 1421, 1571, 2053, 2056, 2209, 2212
FokI GGATG 4 cut(s) 864, 1202, 1709, 2419
FriOI GRGCYC 3 cut(s) 269, 1123, 1356
Fsp4HI GCNGC 6 cut(s) 1421, 1571, 2053, 2056, 2209, 2212
FspBI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1502, 1626, 2037, 2301
FspI TGCGCA 1 cut(s) 1091
GlaI GCGC 2 cut(s) 1091, 1424
GluI GCNGC 6 cut(s) 1421, 1571, 2053, 2056, 2209, 2212
GsaI CCCAGC 1 cut(s) 1445
GsuI CTGGAG 1 cut(s) 703
HaeIII GGCC 3 cut(s) 267, 1207, 2035
HapII CCGG 3 cut(s) 366, 1106, 2363
HhaI GCGC 2 cut(s) 1092, 1425
Hin6I GCGC 2 cut(s) 1090, 1423
HinP1I GCGC 2 cut(s) 1090, 1423
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HpaI GTTAAC 1 cut(s) 535
HpaII CCGG 3 cut(s) 366, 1106, 2363
HphI GGTGA 3 cut(s) 204, 380, 2099
Hpy166II GTNNAC 4 cut(s) 436, 535, 1459, 1960
Hpy8I GTNNAC 4 cut(s) 436, 535, 1459, 1960
Hpy99I CGWCG 1 cut(s) 428
HpyAV CCTTC 9 cut(s) 90, 268, 332, 506, 1180, 1218, 1290, 1368, 2524
HpyCH4III ACNGT 4 cut(s) 311, 1067, 1164, 1374
HpyCH4IV ACGT 2 cut(s) 426, 901
HpyF10VI GCNNNNNNNGC 3 cut(s) 1102, 1111, 2041
HpyF3I CTNAG 7 cut(s) 919, 1328, 1719, 2007, 2204, 2537, 2569
HpySE526I ACGT 2 cut(s) 426, 901
HspAI GCGC 2 cut(s) 1090, 1423
KflI GGGWCCC 1 cut(s) 2102
Ksp22I TGATCA 2 cut(s) 2263, 2281
KspAI GTTAAC 1 cut(s) 535
Kzo9I GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
LmnI GCTCC 6 cut(s) 229, 1003, 1324, 1351, 1359, 1906
Lsp1109I GCAGC 4 cut(s) 1432, 1557, 2067, 2223
LweI GCATC 7 cut(s) 886, 898, 1092, 1137, 1532, 1687, 2494
MabI ACCWGGT 1 cut(s) 2083
MaeI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1502, 1626, 2037, 2301
MaeII ACGT 2 cut(s) 426, 901
MaeIII GTNAC 5 cut(s) 949, 1071, 1779, 1896, 2287
MalI GATC 7 cut(s) 1303, 1365, 1584, 1810, 2265, 2283, 2478
MbiI CCGCTC 1 cut(s) 2610
MboI GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
MfeI CAATTG 2 cut(s) 1827, 1916
MflI RGATCY 1 cut(s) 1363
MhlI GDGCHC 3 cut(s) 269, 1123, 1356
MlyI GAGTC 3 cut(s) 694, 2321, 2534
MmeI TCCRAC 3 cut(s) 574, 1086, 2437
MroXI GAANNNNTTC 1 cut(s) 321
MslI CAYNNNNRTG 2 cut(s) 984, 1201
MspA1I CMGCKG 1 cut(s) 2214
MspI CCGG 3 cut(s) 366, 1106, 2363
MspR9I CCNGG 3 cut(s) 1348, 2085, 2364
MunI CAATTG 2 cut(s) 1827, 1916
Mva1269I GAATGC 2 cut(s) 1391, 1793
MvaI CCWGG 2 cut(s) 1348, 2085
MvnI CGCG 1 cut(s) 193
MwoI GCNNNNNNNGC 3 cut(s) 1102, 1111, 2041
NciI CCSGG 1 cut(s) 2364
NcoI CCATGG 1 cut(s) 1902
NdeI CATATG 1 cut(s) 981
NdeII GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
NlaIV GGNNCC 6 cut(s) 93, 267, 796, 1725, 2103, 2104
NmuCI GTSAC 2 cut(s) 949, 2287
NsbI TGCGCA 1 cut(s) 1091
NspI RCATGY 2 cut(s) 677, 695
PagI TCATGA 2 cut(s) 1759, 2137
PceI AGGCCT 1 cut(s) 2035
PctI GAATGC 2 cut(s) 1391, 1793
PdmI GAANNNNTTC 1 cut(s) 321
PfeI GAWTC 8 cut(s) 218, 413, 490, 752, 1214, 1532, 1553, 2621
PinAI ACCGGT 1 cut(s) 365
PkrI GCNGC 6 cut(s) 1422, 1572, 2054, 2057, 2210, 2213
PleI GAGTC 3 cut(s) 693, 2321, 2533
PpsI GAGTC 3 cut(s) 693, 2321, 2533
PpuMI RGGWCCY 2 cut(s) 92, 2102
PsiI TTATAA 2 cut(s) 849, 2379
Psp124BI GAGCTC 1 cut(s) 1356
Psp5II RGGWCCY 2 cut(s) 92, 2102
Psp6I CCWGG 2 cut(s) 1346, 2083
PspFI CCCAGC 1 cut(s) 1441
PspGI CCWGG 2 cut(s) 1346, 2083
PspN4I GGNNCC 6 cut(s) 93, 267, 796, 1725, 2103, 2104
PspOMI GGGCCC 1 cut(s) 265
PspPI GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2102, 2459
PspPPI RGGWCCY 2 cut(s) 92, 2102
PstNI CAGNNNCTG 1 cut(s) 221
PsuI RGATCY 1 cut(s) 1363
PvuII CAGCTG 1 cut(s) 2214
RsaI GTAC 6 cut(s) 278, 566, 672, 1640, 1995, 2109
RsaNI GTAC 6 cut(s) 277, 565, 671, 1639, 1994, 2108
RseI CAYNNNNRTG 2 cut(s) 984, 1201
SacI GAGCTC 1 cut(s) 1356
SatI GCNGC 6 cut(s) 1421, 1571, 2053, 2056, 2209, 2212
Sau3AI GATC 7 cut(s) 1301, 1363, 1582, 1808, 2263, 2281, 2476
Sau96I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2102, 2459
SchI GAGTC 3 cut(s) 694, 2321, 2534
ScrFI CCNGG 3 cut(s) 1348, 2085, 2364
SduI GDGCHC 3 cut(s) 269, 1123, 1356
SexAI ACCWGGT 1 cut(s) 2083
SfaNI GCATC 7 cut(s) 886, 898, 1092, 1137, 1532, 1687, 2494
SfcI CTRYAG 1 cut(s) 1660
SinI GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2102, 2459
SmiMI CAYNNNNRTG 2 cut(s) 984, 1201
SmlI CTYRAG 1 cut(s) 1728
SmoI CTYRAG 1 cut(s) 1728
SpeI ACTAGT 1 cut(s) 1028
SseBI AGGCCT 1 cut(s) 2035
SsiI CCGC 6 cut(s) 191, 689, 1791, 2053, 2209, 2608
SspI AATATT 2 cut(s) 87, 1767
SspMI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1502, 1626, 2037, 2301
SstI GAGCTC 1 cut(s) 1356
StuI AGGCCT 1 cut(s) 2035
StyD4I CCNGG 3 cut(s) 1346, 2083, 2362
StyI CCWWGG 3 cut(s) 1625, 1902, 2036
TaaI ACNGT 4 cut(s) 311, 1067, 1164, 1374
TaiI ACGT 2 cut(s) 429, 904
TaqI TCGA 7 cut(s) 315, 416, 423, 1131, 1184, 1602, 2528
TatI WGTACW 3 cut(s) 276, 564, 670
TauI GCSGC 2 cut(s) 2055, 2211
TfiI GAWTC 8 cut(s) 218, 413, 490, 752, 1214, 1532, 1553, 2621
TseFI GTSAC 2 cut(s) 949, 2287
TseI GCWGC 4 cut(s) 1420, 1570, 2055, 2211
Tsp45I GTSAC 2 cut(s) 949, 2287
TspGWI ACGGA 1 cut(s) 1001
VpaK11BI GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2102, 2459
XbaI TCTAGA 1 cut(s) 760
XceI RCATGY 2 cut(s) 677, 695
XmaJI CCTAGG 2 cut(s) 1625, 2036
XmnI GAANNNNTTC 1 cut(s) 321
XspI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1502, 1626, 2037, 2301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.