Rh7DG299800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0014015
Physical Location & Seq
Forward (+)
34303464 .. 34309023
5560 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG299800.1

Sequence Viewer

Length: 2751 bp
ATGGACAGCATACCCGAAGAATGGAAATCTCTCTTCCCAATCTCATCAGTCTTCCAGCCTCCACTTCTCATTTCAAACCCTTCAATATTGGGTCCTCTAATCTTCAACCCAAAACCCAACAGCACTACTCTCCTTTTCTCTTGCCCCACTCTCCTGCCACCTCTCACTCCTTTACCTCATCTCTCTCTACCTCGTTTCCTCTTGACCTCCTCACCAGAATCTGCTCCTCTTCCTTCTACCTCTTCCTCCATAGCCTCCTTCTTGGGCCCTCATCAGTACAAATATGACATTCTTTCCTCTTTCCGAAACCGTCTCGAATTCCTTCAATGCCCACAAACTAACACTATTCTTATATTTTTCCCTACCGGTGAGAATTCTGACCAAGTTGGGTTGTTCAAGCTGGTATTAAAAGAATCGACTTTCGACGTTAAAGTTTACAATCTCACTACGAGGTGTCAGTTCAAATACCAGATTTTAAGGATTTCTGTGAATCCCCTTCCTAGCTTATCCAATTTAAGAGGTAATGGTCCTGTTAACATTGGATATTTATTGGCTTCAACTTTGTACTCTGTGCATTGGTTTATTGTAAAGGTTGGAGATTTTGGTCCGAATTCATATAGTGTTAGGTTAGTGTATTTGGGTGGTAGGGTCTTCAAGGCTTGCTGTGTTGTACATGCGTGCTGGAGTCCGCATGTGCTGGAAGAGAGTGTGGTTTTGTTAGAGAATGGTGCTTTATTCTTGTTTGATTTGGAATCTCGTCTAGACAACAATATTTCAAATACATATTTTAAAGGGACCAGATTGAAAGTCCTTTGGGACAATAATGGTTATGGTAGTTCTGGAAATTATAAGTGGTTGAGTTGTGAGTTCAGTTGGCATCCTAGAGTTTTGATTGTTGCACGTTCAGATGCAATTTTCTTAGTTGATTTGAGGTTCAATGAATGTAGTGTGACTTGTTTGATGAAGATTGAGATGTTGCATATGTATGCCCCGATTGAAAAGGAGCAGTTCCGTGTGCTTTCAACGACTAGTTCTGATAGTTTTCACTTTGTTTTGGCTTCCGACAGTTTGTTACTCCTTTGTGATGTGCGCAAGCCATTGATGCCGGTGTTGCAATGGGCTCATAGCATCGACAAAGCAAGCTATATTGATGTTTTTAGACTGTCAGAATTGAGGTCATACTTGAAGGATGACACATATAAATGGCCTTCGGATTCTGGTTTTTGCATTATCTTGGGTTCATTTTGGAATTGTGAGTTCAATATCTTTTCCTATGGACCTTCCCTCCCAATGCCAATAGGATCAGTAGCTTCAAAAATAATGGAGCTTAGAAAATCCTTTTATGCCTGGGAGCTCCCTTCAGATCTTTTACTGTCTAGTCAGGAATGCCATTGTGGAAATTGTCTTGTAAGAGAAGAGTTTTTAAAAGATGCGCTTCCTAAGTGGATTGATTGGCAGCGCAAAAAAGAGATAGTGCTGGGCTTCGGTATTGTAAACAAGGACTTGTCTTCTCTGCTTTCTGAACCAGATGAATTTGGTGGTTTTACACTGATAAGGCTAATGTCCTCAGGAAAGCTAGAATTACAGAGATATTGTGCATCATGGGATTCTATAAAAGAAGTAGAAGAATCACATGGAGAGTTGCTGCATTTTAAGGATCATTTGCTCTGCTCCCTCGAACATGAGGAATACAAATTTCCTAGGAGATTTAAGTACCTTGAACTTGACTACCTCTGTAGTTATCTAAATGGCAATCTTGATGAAGTCTTGGATGCAAAAATAAAAAAGCCCTCTAAGGTTCCTCAAGGGAATGAACTTTTTAGCCCAGAATTTCATGAAATATTATGCAAGAAGTTACATGAATGCGGTTTTGGTCAGTTAAGATCATCTCCTGCTATTACAATTGTTTTAAATGACATCAGCTTGCCAGCAAGCATACATGAAGTTGTTTTGAGGAGATTGTGGTCAGAGTTACCCATGGAGCTTCTGCAATTGGCTTTTTCTAACTATCCTGAAATTCTTGAAGTGCTTGTGAACAAAAAGAGGGTGGCTTTGGAATTCTCTGCTGTACCAGACCTATCTCAGTTGCCTCCTTTCATTTTAAGGAGGCCTAGGAAGCCGTTTTGCCGCAGCAATAAGTGGTCAAAGAAAGTGCAACCTGGTGAAGCCCTTGTGGGTCCCGTACTTCCTCTTCCTCTGTTGCTTACACTTCATGAATTTCGTAATGGGTGTCCAAATTCAGAGGAACAATCAGGCAGATTTTCAGTAGAGGCAGAGCTTAGCCGCAGCTGTGATGAGGTCATGCGGGTTGCCAGCGAAATGGCTGTTTCCAATTCTGATCAAGAGGTTCTTGATGATCAAGTGACTTCCCTTGCTAGTGATGGAGAAGAGAAATGGGGCGACTCTCAAAGGTCAAAACCTTTCTTTTTATATCAGCCGGTTGCAGCTAAAGGCTCTTCAACCTGTCGTAGACAGGGAAAATCTCTTTATAAGAATGACAAGTTTGACACCTTGATTTCTAAAGTGTCAGAGAAGAAGCAAACATCCAATGACATTAGCGATAGCGTTGGACCAGAACTCTTTGATGATCTTTGCCCTGTGGAATTGAGATTTGATGCTTGTCCCATGAAGTTTGAGTCGAAGGAACTGAGGGAATATAATATATTGAAGAGGCAATTCTTAGAATGGCAAAATAGGTTTGACTTGTATAAAGACTTCCGCTCTCGGATTGAATCAAAATCTAATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

916

Amino Acids

104.59

Weight (kDa)

6.2

Isoelectric Point (pI)

53.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF1C_beta-prop PF20641 227 - 323 5.4e-06 TAF1C, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014015)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18310
fragaria_vesca FvH4_5g25850
malus_domestica MD04G1026400.v1.1
prunus_persica Prupe.2G050600_v2.0.a1
pyrus_communis pycom04g02250
rosa_chinensis RchiOBHm_Chr6g0264721 RchiOBHm_Chr6g0264731 RchiOBHm_Chr7g0216331
rosa_laevigata RLG00000002581
rosa_multiflora Rmu_sc0015060.1_g000019
rosa_roxburghii Rroxscaffold_3G00243320
rosa_rugosa Rorug07G0160000
rosa_samantha Rh7AG297400 Rh7BG289700 Rh7CG317600 Rh7DG299800
rosa_wichuraiana Rw7G025300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 849, 2490
Acc16I TGCGCA 1 cut(s) 1091
AccBSI CCGCTC 1 cut(s) 2721
AccI GTMKAC 1 cut(s) 2470
AciI CCGC 6 cut(s) 689, 1866, 2128, 2284, 2305, 2719
AclWI GGATC 2 cut(s) 1309, 1665
AcuI CTGAAG 1 cut(s) 1344
AfaI GTAC 6 cut(s) 278, 566, 672, 1715, 2070, 2184
AfiI CCNNNNNNNGG 1 cut(s) 21
AgeI ACCGGT 1 cut(s) 365
AhlI ACTAGT 1 cut(s) 1028
AjnI CCWGG 2 cut(s) 1346, 2158
AjuI GAANNNNNNNTTGG 2 cut(s) 1854, 1886
Alw21I GWGCWC 1 cut(s) 1356
Alw26I GTCTC 1 cut(s) 317
AlwI GGATC 2 cut(s) 1309, 1665
AlwNI CAGNNNCTG 1 cut(s) 221
AoxI GGCC 3 cut(s) 265, 1205, 2108
ApaI GGGCCC 1 cut(s) 269
ApeKI GCWGC 5 cut(s) 1456, 1645, 2130, 2286, 2444
AsiGI ACCGGT 1 cut(s) 365
Asp700I GAANNNNTTC 1 cut(s) 321
AspA2I CCTAGG 2 cut(s) 1700, 2111
AspLEI GCGC 3 cut(s) 1092, 1435, 1461
AspS9I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2177, 2570
AsuHPI GGTGA 3 cut(s) 204, 380, 2174
AvaII GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2177, 2570
AvrII CCTAGG 2 cut(s) 1700, 2111
AxyI CCTNAGG 1 cut(s) 1567
BaeGI GKGCMC 1 cut(s) 269
BanII GRGCYC 3 cut(s) 269, 1123, 1356
BarI GAAGNNNNNNTAC 4 cut(s) 2175, 2207, 2699, 2731
BbsI GAAGAC 3 cut(s) 43, 643, 1500
Bbv12I GWGCWC 1 cut(s) 1356
BbvI GCAGC 5 cut(s) 1468, 1632, 2142, 2298, 2456
BccI CCATC 1 cut(s) 2375
BceAI ACGGC 1 cut(s) 2104
BciT130I CCWGG 2 cut(s) 1348, 2160
BclI TGATCA 2 cut(s) 2338, 2356
BcoDI GTCTC 1 cut(s) 317
BcuI ACTAGT 1 cut(s) 1028
BfaI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1577, 1701, 2112, 2376
BfmI CTRYAG 1 cut(s) 1735
BglII AGATCT 1 cut(s) 1363
BisI GCNGC 7 cut(s) 1457, 1646, 2128, 2131, 2284, 2287, 2445
BlnI CCTAGG 2 cut(s) 1700, 2111
BlpI GCTNAGC 1 cut(s) 2279
BlsI GCNGC 7 cut(s) 1458, 1647, 2129, 2132, 2285, 2288, 2446
Bme1390I CCNGG 2 cut(s) 1348, 2160
Bme18I GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2177, 2570
BmgT120I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2177, 2570
BmiI GGNNCC 6 cut(s) 93, 267, 796, 1800, 2178, 2179
BmrFI CCNGG 2 cut(s) 1348, 2160
BmsI GCATC 8 cut(s) 886, 898, 1092, 1137, 1420, 1607, 1762, 2605
BpiI GAAGAC 3 cut(s) 43, 643, 1500
BpmI CTGGAG 1 cut(s) 703
Bpu1102I GCTNAGC 1 cut(s) 2279
BpuEI CTTGAG 1 cut(s) 1788
BsaJI CCNNGG 4 cut(s) 1347, 1700, 1977, 2111
BsaWI WCCGGW 1 cut(s) 365
BsaXI ACNNNNNCTCC 2 cut(s) 1269, 1299
Bsc4I CCNNNNNNNGG 1 cut(s) 21
Bse118I RCCGGY 3 cut(s) 365, 1105, 2437
Bse21I CCTNAGG 1 cut(s) 1567
Bse3DI GCAATG 1 cut(s) 1121
BseBI CCWGG 2 cut(s) 1348, 2160
BseDI CCNNGG 4 cut(s) 1347, 1700, 1977, 2111
BseGI GGATG 4 cut(s) 877, 1195, 1777, 2543
BseLI CCNNNNNNNGG 1 cut(s) 21
BseMI GCAATG 1 cut(s) 1121
BseMII CTCAG 3 cut(s) 1581, 2096, 2639
BseRI GAGGAG 3 cut(s) 199, 216, 1969
BseSI GKGCMC 1 cut(s) 269
BseXI GCAGC 5 cut(s) 1468, 1632, 2142, 2298, 2456
BseYI CCCAGC 1 cut(s) 1477
BshFI GGCC 3 cut(s) 267, 1207, 2110
BshTI ACCGGT 1 cut(s) 365
BsiHKAI GWGCWC 1 cut(s) 1356
BsiSI CCGG 3 cut(s) 366, 1106, 2438
BslFI GGGAC 4 cut(s) 808, 830, 2163, 2607
BslI CCNNNNNNNGG 1 cut(s) 21
BsmAI GTCTC 1 cut(s) 317
BsmBI CGTCTC 1 cut(s) 317
BsmFI GGGAC 4 cut(s) 808, 830, 2163, 2607
BsmI GAATGC 2 cut(s) 1391, 1868
BsnI GGCC 3 cut(s) 267, 1207, 2110
Bsp120I GGGCCC 1 cut(s) 265
Bsp1286I GDGCHC 3 cut(s) 269, 1123, 1356
Bsp1407I TGTACA 1 cut(s) 670
Bsp143I GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
Bsp1720I GCTNAGC 1 cut(s) 2279
Bsp19I CCATGG 1 cut(s) 1977
BspACI CCGC 6 cut(s) 689, 1866, 2128, 2284, 2305, 2719
BspANI GGCC 3 cut(s) 267, 1207, 2110
BspCNI CTCAG 3 cut(s) 1580, 2095, 2640
BspHI TCATGA 2 cut(s) 1834, 2212
BspLI GGNNCC 6 cut(s) 93, 267, 796, 1800, 2178, 2179
BspPI GGATC 2 cut(s) 1309, 1665
BspQI GCTCTTC 1 cut(s) 2461
BsrBI CCGCTC 1 cut(s) 2721
BsrDI GCAATG 1 cut(s) 1121
BsrFI RCCGGY 3 cut(s) 365, 1105, 2437
BsrGI TGTACA 1 cut(s) 670
BssAI RCCGGY 3 cut(s) 365, 1105, 2437
BssECI CCNNGG 4 cut(s) 1347, 1700, 1977, 2111
BssMI GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
BssT1I CCWWGG 3 cut(s) 1700, 1977, 2111
Bst2UI CCWGG 2 cut(s) 1348, 2160
Bst4CI ACNGT 4 cut(s) 311, 1067, 1164, 1374
Bst6I CTCTTC 9 cut(s) 38, 234, 247, 696, 1410, 2196, 2382, 2461, 2663
BstAUI TGTACA 1 cut(s) 670
BstC8I GCNNGC 8 cut(s) 661, 679, 1094, 1141, 1925, 1929, 1933, 2314
BstDEI CTNAG 9 cut(s) 919, 1328, 1440, 1567, 1794, 2082, 2279, 2648, 2680
BstDSI CCRYGG 1 cut(s) 1977
BstF5I GGATG 4 cut(s) 877, 1195, 1777, 2543
BstHHI GCGC 3 cut(s) 1092, 1435, 1461
BstKTI GATC 7 cut(s) 1304, 1366, 1660, 1886, 2341, 2359, 2590
BstMAI GTCTC 1 cut(s) 317
BstMBI GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
BstMWI GCNNNNNNNGC 3 cut(s) 1102, 1111, 2116
BstNI CCWGG 2 cut(s) 1348, 2160
BstNSI RCATGY 2 cut(s) 677, 695
BstSCI CCNGG 2 cut(s) 1346, 2158
BstSFI CTRYAG 1 cut(s) 1735
BstSLI GKGCMC 1 cut(s) 269
BstV1I GCAGC 5 cut(s) 1468, 1632, 2142, 2298, 2456
BstV2I GAAGAC 3 cut(s) 43, 643, 1500
BstX2I RGATCY 1 cut(s) 1363
BstXI CCANNNNNNTGG 1 cut(s) 2320
BstYI RGATCY 1 cut(s) 1363
Bsu36I CCTNAGG 1 cut(s) 1567
BsuRI GGCC 3 cut(s) 267, 1207, 2110
BtgI CCRYGG 1 cut(s) 1977
BtsCI GGATG 4 cut(s) 877, 1195, 1777, 2543
BtsIMutI CAGTG 1 cut(s) 1547
Cac8I GCNNGC 8 cut(s) 661, 679, 1094, 1141, 1925, 1929, 1933, 2314
CaiI CAGNNNCTG 1 cut(s) 221
CciI TCATGA 2 cut(s) 1834, 2212
CfoI GCGC 3 cut(s) 1092, 1435, 1461
Cfr10I RCCGGY 3 cut(s) 365, 1105, 2437
Cfr13I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2177, 2570
CsiI ACCWGGT 1 cut(s) 2158
Csp6I GTAC 6 cut(s) 277, 565, 671, 1714, 2069, 2183
CspAI ACCGGT 1 cut(s) 365
CviQI GTAC 6 cut(s) 277, 565, 671, 1714, 2069, 2183
DdeI CTNAG 9 cut(s) 919, 1328, 1440, 1567, 1794, 2082, 2279, 2648, 2680
DpnI GATC 7 cut(s) 1303, 1365, 1659, 1885, 2340, 2358, 2589
DpnII GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
DraI TTTAAA 3 cut(s) 790, 1425, 1911
Eam1104I CTCTTC 9 cut(s) 38, 234, 247, 696, 1410, 2196, 2382, 2461, 2663
EarI CTCTTC 9 cut(s) 38, 234, 247, 696, 1410, 2196, 2382, 2461, 2663
Ecl136II GAGCTC 1 cut(s) 1354
Eco130I CCWWGG 3 cut(s) 1700, 1977, 2111
Eco147I AGGCCT 1 cut(s) 2110
Eco24I GRGCYC 3 cut(s) 269, 1123, 1356
Eco47I GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2177, 2570
Eco53kI GAGCTC 1 cut(s) 1354
Eco57I CTGAAG 1 cut(s) 1344
Eco81I CCTNAGG 1 cut(s) 1567
EcoICRI GAGCTC 1 cut(s) 1354
EcoO109I RGGNCCY 3 cut(s) 92, 266, 2177
EcoRI GAATTC 4 cut(s) 317, 373, 610, 2057
EcoRII CCWGG 2 cut(s) 1346, 2158
EcoT14I CCWWGG 3 cut(s) 1700, 1977, 2111
EcoT38I GRGCYC 3 cut(s) 269, 1123, 1356
ErhI CCWWGG 3 cut(s) 1700, 1977, 2111
Esp3I CGTCTC 1 cut(s) 317
FalI AAGNNNNNCTT 4 cut(s) 1419, 1451, 2334, 2366
FaqI GGGAC 4 cut(s) 808, 830, 2163, 2607
FauI CCCGC 1 cut(s) 2298
FauNDI CATATG 1 cut(s) 981
FbaI TGATCA 2 cut(s) 2338, 2356
FblI GTMKAC 1 cut(s) 2470
Fnu4HI GCNGC 7 cut(s) 1457, 1646, 2128, 2131, 2284, 2287, 2445
FokI GGATG 4 cut(s) 864, 1202, 1784, 2530
FriOI GRGCYC 3 cut(s) 269, 1123, 1356
Fsp4HI GCNGC 7 cut(s) 1457, 1646, 2128, 2131, 2284, 2287, 2445
FspBI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1577, 1701, 2112, 2376
FspI TGCGCA 1 cut(s) 1091
GlaI GCGC 3 cut(s) 1091, 1434, 1460
GluI GCNGC 7 cut(s) 1457, 1646, 2128, 2131, 2284, 2287, 2445
GsaI CCCAGC 1 cut(s) 1481
GsuI CTGGAG 1 cut(s) 703
HaeIII GGCC 3 cut(s) 267, 1207, 2110
HapII CCGG 3 cut(s) 366, 1106, 2438
HhaI GCGC 3 cut(s) 1092, 1435, 1461
Hin6I GCGC 3 cut(s) 1090, 1433, 1459
HinP1I GCGC 3 cut(s) 1090, 1433, 1459
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HpaI GTTAAC 1 cut(s) 535
HpaII CCGG 3 cut(s) 366, 1106, 2438
HphI GGTGA 3 cut(s) 204, 380, 2174
Hpy166II GTNNAC 5 cut(s) 436, 535, 1495, 2035, 2471
Hpy8I GTNNAC 5 cut(s) 436, 535, 1495, 2035, 2471
Hpy99I CGWCG 1 cut(s) 428
HpyCH4III ACNGT 4 cut(s) 311, 1067, 1164, 1374
HpyCH4IV ACGT 2 cut(s) 426, 901
HpyF10VI GCNNNNNNNGC 3 cut(s) 1102, 1111, 2116
HpyF3I CTNAG 9 cut(s) 919, 1328, 1440, 1567, 1794, 2082, 2279, 2648, 2680
HpySE526I ACGT 2 cut(s) 426, 901
HspAI GCGC 3 cut(s) 1090, 1433, 1459
KflI GGGWCCC 1 cut(s) 2177
Ksp22I TGATCA 2 cut(s) 2338, 2356
KspAI GTTAAC 1 cut(s) 535
Kzo9I GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
LguI GCTCTTC 1 cut(s) 2461
LmnI GCTCC 7 cut(s) 229, 1003, 1324, 1351, 1359, 1676, 1981
Lsp1109I GCAGC 5 cut(s) 1468, 1632, 2142, 2298, 2456
LweI GCATC 8 cut(s) 886, 898, 1092, 1137, 1420, 1607, 1762, 2605
MabI ACCWGGT 1 cut(s) 2158
MaeI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1577, 1701, 2112, 2376
MaeII ACGT 2 cut(s) 426, 901
MaeIII GTNAC 5 cut(s) 949, 1071, 1854, 1971, 2362
MalI GATC 7 cut(s) 1303, 1365, 1659, 1885, 2340, 2358, 2589
MbiI CCGCTC 1 cut(s) 2721
MboI GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
MfeI CAATTG 2 cut(s) 1902, 1991
MflI RGATCY 1 cut(s) 1363
MhlI GDGCHC 3 cut(s) 269, 1123, 1356
MlyI GAGTC 3 cut(s) 694, 2396, 2645
MmeI TCCRAC 3 cut(s) 574, 1086, 2548
MroXI GAANNNNTTC 1 cut(s) 321
MslI CAYNNNNRTG 2 cut(s) 984, 1201
MspA1I CMGCKG 1 cut(s) 2289
MspI CCGG 3 cut(s) 366, 1106, 2438
MspR9I CCNGG 2 cut(s) 1348, 2160
MunI CAATTG 2 cut(s) 1902, 1991
Mva1269I GAATGC 2 cut(s) 1391, 1868
MvaI CCWGG 2 cut(s) 1348, 2160
MwoI GCNNNNNNNGC 3 cut(s) 1102, 1111, 2116
NcoI CCATGG 1 cut(s) 1977
NdeI CATATG 1 cut(s) 981
NdeII GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
NlaIV GGNNCC 6 cut(s) 93, 267, 796, 1800, 2178, 2179
NmuCI GTSAC 2 cut(s) 949, 2362
NsbI TGCGCA 1 cut(s) 1091
NspI RCATGY 2 cut(s) 677, 695
PagI TCATGA 2 cut(s) 1834, 2212
PceI AGGCCT 1 cut(s) 2110
PciSI GCTCTTC 1 cut(s) 2461
PctI GAATGC 2 cut(s) 1391, 1868
PdmI GAANNNNTTC 1 cut(s) 321
PfeI GAWTC 8 cut(s) 218, 413, 490, 752, 1214, 1607, 1628, 2732
PinAI ACCGGT 1 cut(s) 365
PkrI GCNGC 7 cut(s) 1458, 1647, 2129, 2132, 2285, 2288, 2446
PleI GAGTC 3 cut(s) 693, 2396, 2644
PpsI GAGTC 3 cut(s) 693, 2396, 2644
PpuMI RGGWCCY 2 cut(s) 92, 2177
PsiI TTATAA 2 cut(s) 849, 2490
Psp124BI GAGCTC 1 cut(s) 1356
Psp5II RGGWCCY 2 cut(s) 92, 2177
Psp6I CCWGG 2 cut(s) 1346, 2158
PspFI CCCAGC 1 cut(s) 1477
PspGI CCWGG 2 cut(s) 1346, 2158
PspN4I GGNNCC 6 cut(s) 93, 267, 796, 1800, 2178, 2179
PspOMI GGGCCC 1 cut(s) 265
PspPI GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2177, 2570
PspPPI RGGWCCY 2 cut(s) 92, 2177
PstNI CAGNNNCTG 1 cut(s) 221
PsuI RGATCY 1 cut(s) 1363
PvuII CAGCTG 1 cut(s) 2289
RsaI GTAC 6 cut(s) 278, 566, 672, 1715, 2070, 2184
RsaNI GTAC 6 cut(s) 277, 565, 671, 1714, 2069, 2183
RseI CAYNNNNRTG 2 cut(s) 984, 1201
SacI GAGCTC 1 cut(s) 1356
SapI GCTCTTC 1 cut(s) 2461
SatI GCNGC 7 cut(s) 1457, 1646, 2128, 2131, 2284, 2287, 2445
Sau3AI GATC 7 cut(s) 1301, 1363, 1657, 1883, 2338, 2356, 2587
Sau96I GGNCC 9 cut(s) 92, 265, 266, 527, 605, 795, 1277, 2177, 2570
SchI GAGTC 3 cut(s) 694, 2396, 2645
ScrFI CCNGG 2 cut(s) 1348, 2160
SduI GDGCHC 3 cut(s) 269, 1123, 1356
SexAI ACCWGGT 1 cut(s) 2158
SfaNI GCATC 8 cut(s) 886, 898, 1092, 1137, 1420, 1607, 1762, 2605
SfcI CTRYAG 1 cut(s) 1735
SinI GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2177, 2570
SmiMI CAYNNNNRTG 2 cut(s) 984, 1201
SmlI CTYRAG 1 cut(s) 1803
SmoI CTYRAG 1 cut(s) 1803
SpeI ACTAGT 1 cut(s) 1028
SseBI AGGCCT 1 cut(s) 2110
SsiI CCGC 6 cut(s) 689, 1866, 2128, 2284, 2305, 2719
SspI AATATT 3 cut(s) 87, 772, 1842
SspMI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1577, 1701, 2112, 2376
SstI GAGCTC 1 cut(s) 1356
StuI AGGCCT 1 cut(s) 2110
StyD4I CCNGG 2 cut(s) 1346, 2158
StyI CCWWGG 3 cut(s) 1700, 1977, 2111
TaaI ACNGT 4 cut(s) 311, 1067, 1164, 1374
TaiI ACGT 2 cut(s) 429, 904
TaqI TCGA 6 cut(s) 315, 416, 423, 1131, 1677, 2639
TatI WGTACW 3 cut(s) 276, 564, 670
TauI GCSGC 2 cut(s) 2130, 2286
TfiI GAWTC 8 cut(s) 218, 413, 490, 752, 1214, 1607, 1628, 2732
TscAI CASTG 1 cut(s) 1554
TseFI GTSAC 2 cut(s) 949, 2362
TseI GCWGC 5 cut(s) 1456, 1645, 2130, 2286, 2444
Tsp45I GTSAC 2 cut(s) 949, 2362
TspGWI ACGGA 1 cut(s) 1001
TspRI CASTG 1 cut(s) 1554
VpaK11BI GGWCC 7 cut(s) 92, 527, 605, 795, 1277, 2177, 2570
XbaI TCTAGA 1 cut(s) 760
XceI RCATGY 2 cut(s) 677, 695
XmaJI CCTAGG 2 cut(s) 1700, 2111
XmiI GTMKAC 1 cut(s) 2470
XmnI GAANNNNTTC 1 cut(s) 321
XspI CTAG 9 cut(s) 501, 761, 882, 1029, 1377, 1577, 1701, 2112, 2376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.