AT3G19200

Belongs to the sulfotransferase 1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
6649228 .. 6650199
972 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G19200.1

Sequence Viewer

Length: 432 bp
ATGGCTAATGCTGTAGAACAATCCTCATTGTATCCATCCTTCGTAGACGCAAGAATCTCGTTCTCCAATGATTTTGCAGACAGTGATAGTAAACATACGGCATCAAGAGCAGATGGTCAGATGAAGTACAAGGAAGCTCCTGTTTCTTCGGATTTCAAATTCAATGTCGAAAACTTCGGTTTCACTTCTGCGGCTGATGAGATCTTCTTTGGTGGAGTTTTGTTGCCACTTGAGAAGACTACTCAGAGGAAAGTGACGACACTTAGAGATGAATTAAGTGCTCAAGATTCTGACCGTACCATCTCATCAAAGGGATCTCGTAACTGGTGGAAATTAGGTCTCAACAAGTCCAAGAAAATCCATTCCAACAACTTCCATCTTCCACACAAATCTCAGAATTGTCTTGCAAGTATACTGGAATCTGATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

15.98

Weight (kDa)

6.42

Isoelectric Point (pI)

36.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013889)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19200 AT4G34419
fragaria_vesca FvH4_2g06210
malus_domestica MD05G1079600.v1.1 MD10G1093900.v1.1
prunus_persica Prupe.8G123500_v2.0.a1
pyrus_communis pycom10g07730
rosa_chinensis RchiOBHm_Chr6g0256981
rosa_laevigata RLG00000014667
rosa_multiflora Rmu_sc0000659.1_g000036
rosa_roxburghii Rroxscaffold_7G00208390
rosa_rugosa Rorug05G0575900
rosa_samantha Rh6AG094500 Rh6BG085800 Rh6CG081900 Rh6DG077600
rosa_wichuraiana Rw6G008090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 45, 412
AciI CCGC 1 cut(s) 191
AclWI GGATC 1 cut(s) 322
AcsI RAATTY 1 cut(s) 158
AfaI GTAC 2 cut(s) 128, 298
AgsI TTSAA 2 cut(s) 157, 163
AluBI AGCT 1 cut(s) 137
AluI AGCT 1 cut(s) 137
Alw21I GWGCWC 1 cut(s) 283
Alw26I GTCTC 1 cut(s) 344
AlwI GGATC 1 cut(s) 322
ApoI RAATTY 1 cut(s) 158
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
BarI GAAGNNNNNNTAC 2 cut(s) 23, 55
BbsI GAAGAC 1 cut(s) 242
Bbv12I GWGCWC 1 cut(s) 283
BccI CCATC 4 cut(s) 43, 107, 308, 384
BceAI ACGGC 1 cut(s) 114
BcgI CGANNNNNNTGC 2 cut(s) 39, 73
BciVI GTATCC 1 cut(s) 42
BcoDI GTCTC 1 cut(s) 344
BfmI CTRYAG 1 cut(s) 12
BfuI GTATCC 1 cut(s) 42
BglII AGATCT 1 cut(s) 201
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
BmsI GCATC 1 cut(s) 110
BpiI GAAGAC 1 cut(s) 242
BpuEI CTTGAG 2 cut(s) 251, 267
BsaI GGTCTC 1 cut(s) 344
Bse1I ACTGG 2 cut(s) 329, 420
BseGI GGATG 1 cut(s) 35
BseMII CTCAG 2 cut(s) 257, 407
BseNI ACTGG 2 cut(s) 329, 420
BsiHKAI GWGCWC 1 cut(s) 283
BsmAI GTCTC 1 cut(s) 344
Bso31I GGTCTC 1 cut(s) 344
Bsp1286I GDGCHC 1 cut(s) 283
Bsp143I GATC 2 cut(s) 201, 314
BspACI CCGC 1 cut(s) 191
BspCNI CTCAG 2 cut(s) 256, 406
BspPI GGATC 1 cut(s) 322
BspTNI GGTCTC 1 cut(s) 344
BsrI ACTGG 2 cut(s) 329, 420
BssMI GATC 2 cut(s) 201, 314
BssNAI GTATAC 1 cut(s) 413
Bst1107I GTATAC 1 cut(s) 413
Bst4CI ACNGT 2 cut(s) 83, 296
BstDEI CTNAG 3 cut(s) 243, 263, 393
BstF5I GGATG 1 cut(s) 35
BstKTI GATC 2 cut(s) 204, 317
BstMAI GTCTC 1 cut(s) 344
BstMBI GATC 2 cut(s) 201, 314
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstSFI CTRYAG 1 cut(s) 12
BstV2I GAAGAC 1 cut(s) 242
BstX2I RGATCY 2 cut(s) 201, 314
BstYI RGATCY 2 cut(s) 201, 314
BstZ17I GTATAC 1 cut(s) 413
BsuI GTATCC 1 cut(s) 42
BtsCI GGATG 1 cut(s) 35
BtsIMutI CAGTG 1 cut(s) 88
CseI GACGC 1 cut(s) 56
Csp6I GTAC 2 cut(s) 127, 297
CviJI RGCY 3 cut(s) 5, 137, 194
CviKI_1 RGCY 3 cut(s) 5, 137, 194
CviQI GTAC 2 cut(s) 127, 297
DdeI CTNAG 3 cut(s) 243, 263, 393
DpnI GATC 2 cut(s) 203, 316
DpnII GATC 2 cut(s) 201, 314
Eco31I GGTCTC 1 cut(s) 344
FaiI YATR 2 cut(s) 96, 413
FblI GTMKAC 2 cut(s) 45, 412
Fnu4HI GCNGC 1 cut(s) 192
FokI GGATG 1 cut(s) 22
Fsp4HI GCNGC 1 cut(s) 192
GluI GCNGC 1 cut(s) 192
HgaI GACGC 1 cut(s) 56
HinfI GANTC 3 cut(s) 54, 287, 419
Hpy166II GTNNAC 3 cut(s) 46, 92, 413
Hpy188I TCNGA 6 cut(s) 120, 151, 246, 292, 396, 424
Hpy188III TCNNGA 2 cut(s) 105, 284
Hpy8I GTNNAC 3 cut(s) 46, 92, 413
HpyAV CCTTC 1 cut(s) 49
HpyCH4III ACNGT 2 cut(s) 83, 296
HpyCH4V TGCA 2 cut(s) 77, 407
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
HpyF3I CTNAG 3 cut(s) 243, 263, 393
Kzo9I GATC 2 cut(s) 201, 314
LmnI GCTCC 1 cut(s) 142
LpnPI CCDG 3 cut(s) 153, 310, 401
LweI GCATC 1 cut(s) 110
MaeIII GTNAC 2 cut(s) 253, 320
MalI GATC 2 cut(s) 203, 316
MboI GATC 2 cut(s) 201, 314
MboII GAAGA 4 cut(s) 138, 196, 247, 371
MflI RGATCY 2 cut(s) 201, 314
MhlI GDGCHC 1 cut(s) 283
MluCI AATT 4 cut(s) 158, 272, 332, 397
MmeI TCCRAC 1 cut(s) 390
MnlI CCTC 2 cut(s) 34, 240
MseI TTAA 1 cut(s) 275
MwoI GCNNNNNNNGC 1 cut(s) 107
NdeII GATC 2 cut(s) 201, 314
NmuCI GTSAC 1 cut(s) 253
PfeI GAWTC 3 cut(s) 54, 287, 419
PkrI GCNGC 1 cut(s) 193
PsuI RGATCY 2 cut(s) 201, 314
RsaI GTAC 2 cut(s) 128, 298
RsaNI GTAC 2 cut(s) 127, 297
SaqAI TTAA 1 cut(s) 275
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 2 cut(s) 201, 314
SduI GDGCHC 1 cut(s) 283
SetI ASST 2 cut(s) 139, 340
SfaNI GCATC 1 cut(s) 110
SfcI CTRYAG 1 cut(s) 12
SmlI CTYRAG 2 cut(s) 230, 282
SmoI CTYRAG 2 cut(s) 230, 282
Sse9I AATT 4 cut(s) 158, 272, 332, 397
SsiI CCGC 1 cut(s) 191
TaaI ACNGT 2 cut(s) 83, 296
TaqI TCGA 1 cut(s) 168
TasI AATT 4 cut(s) 158, 272, 332, 397
TatI WGTACW 1 cut(s) 126
TauI GCSGC 1 cut(s) 194
TfiI GAWTC 3 cut(s) 54, 287, 419
Tru1I TTAA 1 cut(s) 275
Tru9I TTAA 1 cut(s) 275
TscAI CASTG 1 cut(s) 88
TseFI GTSAC 1 cut(s) 253
Tsp45I GTSAC 1 cut(s) 253
TspDTI ATGAA 2 cut(s) 137, 285
TspRI CASTG 1 cut(s) 88
XapI RAATTY 1 cut(s) 158
XmiI GTMKAC 2 cut(s) 45, 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.