AT3G19210

Protein CHROMATIN REMODELING

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0008727
Physical Location & Seq
Reverse (-)
6652695 .. 6658988
6294 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G19210.1

Sequence Viewer

Length: 2733 bp
ATGGAGGAAGAAGATGAAGAGATCTTATCGTCTTCCGATTGCGACGATTCCAGCGATAGTTACAAGGATGATTCTCAAGATTCTGAAGGAGAAAACGATAACCCTGAGTGCGAAGACCTTGCGGTGGTTTCTCTTTCATCCGACGCAGATCGGAAATCTAAGAACGTAAAGGATCTTCTGAGGGGCAATCTAGTTGTGCAACGGCAGCCACTCCTTCCTCGGGTGCTTTCGGTGTCAGATGGAGCGGCAGTTTGTAGGAAGCCTTTCAAACCTCCGTGTTCTCATGGTTATGATTCCACAGGACAACTTTCTCGTCGCCTTTCAGCTCGAAAACGGTTTGTTCCTTGGGGTTCCTCAACTCCGGTTGTGGTTGCTTTACCTACTAAGCTGGAAGCATCAACCAATATTGAGAGAGATGAAGAAGAGGAAGTTGTTTGTCTACCACCTGATATTGAACCTTTGGTATTGTGGCAATCTGAAGAAGATGGAATGAGCAATGTAACAACTATCATGGTGCATTCAGTGCTTGTCAAATTTCTTCGCCCTCATCAAAGAGAGGGTGTCCAGTTCATGTTCGATTGTGTTTCAGGATTACATGGTTCGGCAAATATAAATGGTTGCATTCTGGCTGATGACATGGGTTTAGGGAAGACATTACAGTCCATTACTTTACTATACACACTTCTTTGTCAAGGATTTGATGGGACGCCTATGGTTAAAAAGGCCATTATTGTTACACCAACGAGTCTTGTCAGTAACTGGGAAGCTGAAATTAAGAAATGGGTTGGAGACAGGATTCAGCTTATAGCCCTCTGTGAGAGCACCAGAGATGATGTTTTGTCTGGAATAGATAGTTTCACTCGACCAAGAAGCGCTTTGCAGGTACTTATCATTTCTTACGAGACATTCCGAATGCACTCATCCAAGTTCTGCCAGAGTGAATCCTGTGATCTTCTAATATGCGATGAGGCTCATAGGTTGAAAAATGACCAGACACTTACAAACAGGGCTTTGGCTTCATTGACATGCAAACGTCGAGTTTTGTTGTCTGGAACTCCCATGCAGAATGACTTGGAAGAGTTTTTTGCCATGGTCAACTTCACAAATCCAGGGAGTTTAGGTGATGCTGCACACTTTCGCCATTATTATGAGGCACCTATTATATGTGGAAGAGAACCTACAGCCACTGAGGAAGAGAAAAACTTAGCTGCTGACCGCTCCGCAGAACTGAGTTCAAAAGTCAACCAGTTTATTTTGAGGAGAACCAATGCATTGCTCTCAAATCACCTACCACCTAAGATAATTGAAGTAGTTTGTTGCAAGATGACTACTCTCCAGTCCACTTTGTACAACCATTTTATTAGCTCGAAAAATCTTAAAAGGGCGCTTGCTGATAATGCAAAACAAACCAAAGTTTTGGCTTATATAACAGCTCTTAAGAAGCTCTGCAATCATCCAAAGCTAATCTACGACACAATAAAAAGCGGCAATCCTGGAACTGTTGGGTTTGAGAATTGCTTAGAGTTCTTCCCTGCAGAAATGTTCTCTGGGAGATCTGGAGCATGGACAGGGGGTGATGGTGCCTGGGTCGAGCTCTCTGGGAAAATGCATGTTCTCTCCAGACTTTTGGCCAACCTACGTCGAAAAACTGATGACCGCATAGTCCTTGTATCAAACTACACACAGACATTGGATCTTTTTGCTCAACTCTGTCGTGAAAGAAGATATCCTTTTCTGAGGCTGGATGGATCAACAACAATCAGCAAGAGGCAGAAGCTTGTTAACCGGTTGAACGACCCAACAAAGGATGAGTTTGCATTTCTCTTAAGCAGCAAGGCGGGTGGCTGTGGATTAAATTTAATTGGTGCTAATCGACTTGTTTTGTTCGATCCTGATTGGAATCCTGCCAATGATAAACAAGCTGCTGCTAGAGTTTGGAGGGATGGGCAAAAGAAAAGAGTATATGTCTACAGGTTTCTTAGTACTGGAACTATTGAAGAAAAGGTTTACCAGCGCCAGATGTCAAAAGAAGGGCTTCAAAAAGTTATTCAGCATGAACAGACGGATAACAGCACGAGACAGGGGAACTTACTTTCTACAGAGGATCTACGAGATTTATTTTCCTTCCATGGGGATGTTAGGTCTGAAATCCATGAAAAGATGAGCTGCAGCAGGTGCCAAAATGATGCCTCTGGTACTGAGAATATCGAAGAAGGGAATGAGAACAATGTAGATGACAATGCTTGCCAGATTGACCAAGAAGACATAGGCGGATTTGCAAAAGATGCAGGATGCTTTAACTTGTTAAAAAACTCTGAGAGACAGGTGGGCACTCCATTGGAAGAAGATCTAGGAAGCTGGGGTCATCACTTTACCTCAAAATCCGTTCCAGATGCTATACTGCAAGCTTCAGCAGGTGACGAGGTGACGTTTGTTTTCACAAACCAGGTAGATGGGAAGCTCGTTCCCATCGAATCAAATGTCAGTCCAAAAACGGTGGAGTCCGAAGAGCACAATCGGAACCAACCTGTAAATAAGCGTGCCTTTAACAAACCACAACAAAGACCTCGGGAACCGCTGCAGCCGTTATCTCTCAACGAGACCACAAAAAGAGTGAAGTTGTCTACTTATAAGCGTTTACATGGTAATAGTAACATTGATGATGCTCAGATTAAAATGTCTTTGCAAAGACCAAATCTAGTTTCTGTAAATCACGATGATGATTTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000280 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006311 GO:0006325 GO:0006338 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015616 GO:0016043 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0030491 GO:0030702 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0033170 GO:0033554 GO:0034641 GO:0035822 GO:0035825 GO:0035861 GO:0040029 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045003 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048285 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051321 GO:0051701 GO:0051704 GO:0051716 GO:0060255 GO:0061806 GO:0061982 GO:0065007 GO:0070887 GO:0071214 GO:0071241 GO:0071248 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0104004 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1902679 GO:1903046 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

910

Amino Acids

101.86

Weight (kDa)

5.74

Isoelectric Point (pI)

50.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 180 - 353 2.7e-08 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 183 - 488 1.6e-69 SNF2-related domain
DEAD PF00270 207 - 360 3e-07 DEAD/DEAH box helicase
Helicase_C PF00271 535 - 649 2e-20 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2631
AarI CACCTGC 2 cut(s) 2163, 2405
AasI GACNNNNNNGTC 2 cut(s) 658, 1661
Acc36I ACCTGC 3 cut(s) 871, 2163, 2405
AccB1I GGYRCC 3 cut(s) 1153, 1580, 2175
AccBSI CCGCTC 2 cut(s) 245, 1218
AccI GTMKAC 3 cut(s) 439, 1968, 2624
AciI CCGC 9 cut(s) 122, 245, 1216, 1221, 1485, 1657, 1838, 2271, 2576
AclWI GGATC 5 cut(s) 180, 1701, 1756, 1883, 2112
AcoI YGGCCR 1 cut(s) 1629
AcsI RAATTY 2 cut(s) 533, 1855
AcuI CTGAAG 3 cut(s) 105, 498, 2394
AcyI GRCGYC 1 cut(s) 707
AfaI GTAC 4 cut(s) 885, 1349, 1984, 2197
AfeI AGCGCT 1 cut(s) 874
AfiI CCNNNNNNNGG 4 cut(s) 124, 220, 1804, 2130
AflII CTTAAG 2 cut(s) 1436, 1825
AgeI ACCGGT 1 cut(s) 1785
AgsI TTSAA 8 cut(s) 268, 455, 982, 1236, 1307, 1792, 1997, 2039
AjnI CCWGG 4 cut(s) 1108, 1492, 1583, 2445
AjuI GAANNNNNNNTTGG 2 cut(s) 2686, 2718
Alw21I GWGCWC 3 cut(s) 824, 1596, 2514
Alw26I GTCTC 5 cut(s) 783, 896, 2071, 2314, 2594
AlwI GGATC 5 cut(s) 180, 1701, 1756, 1883, 2112
AlwNI CAGNNNCTG 2 cut(s) 759, 1187
Ama87I CYCGRG 2 cut(s) 219, 2568
Aor51HI AGCGCT 1 cut(s) 874
AoxI GGCC 2 cut(s) 723, 1629
ApoI RAATTY 2 cut(s) 533, 1855
ArsI GACNNNNNNTTYG 2 cut(s) 2466, 2498
AsiGI ACCGGT 1 cut(s) 1785
Asp700I GAANNNNTTC 2 cut(s) 263, 2034
AspLEI GCGC 3 cut(s) 875, 1387, 2016
AsuHPI GGTGA 5 cut(s) 1133, 1277, 1586, 2429, 2437
AvaI CYCGRG 2 cut(s) 219, 2568
BaeGI GKGCMC 1 cut(s) 2333
BalI TGGCCA 1 cut(s) 1631
BanI GGYRCC 3 cut(s) 1153, 1580, 2175
BanII GRGCYC 1 cut(s) 1596
BarI GAAGNNNNNNTAC 4 cut(s) 159, 191, 1162, 1194
BauI CACGAG 1 cut(s) 2074
BbsI GAAGAC 4 cut(s) 24, 120, 656, 2268
Bbv12I GWGCWC 3 cut(s) 824, 1596, 2514
BccI CCATC 8 cut(s) 233, 479, 695, 1571, 1739, 1937, 2447, 2477
BceAI ACGGC 2 cut(s) 218, 2569
BcgI CGANNNNNNTGC 2 cut(s) 101, 135
BciT130I CCWGG 4 cut(s) 1110, 1494, 1585, 2447
BcoDI GTCTC 5 cut(s) 783, 896, 2071, 2314, 2594
BfaI CTAG 4 cut(s) 191, 1929, 2351, 2699
BfmI CTRYAG 6 cut(s) 1179, 1533, 1969, 2097, 2167, 2579
BfoI RGCGCY 3 cut(s) 876, 1388, 2017
BfrI CTTAAG 2 cut(s) 1436, 1825
BfuAI ACCTGC 3 cut(s) 871, 2163, 2405
BglII AGATCT 3 cut(s) 21, 1553, 2347
BmcAI AGTACT 1 cut(s) 1984
Bme1390I CCNGG 4 cut(s) 1110, 1494, 1585, 2447
BmeT110I CYCGRG 2 cut(s) 219, 2568
BmiI GGNNCC 6 cut(s) 352, 1155, 1582, 2177, 2522, 2574
BmrFI CCNGG 4 cut(s) 1110, 1494, 1585, 2447
BmrI ACTGGG 1 cut(s) 769
BmsI GCATC 7 cut(s) 404, 1114, 2176, 2275, 2282, 2383, 2653
BmuI ACTGGG 1 cut(s) 769
BpiI GAAGAC 4 cut(s) 24, 120, 656, 2268
BpmI CTGGAG 3 cut(s) 1319, 1578, 1603
BpuEI CTTGAG 1 cut(s) 60
BsaBI GATNNNNATC 1 cut(s) 1899
BsaHI GRCGYC 1 cut(s) 707
BsaI GGTCTC 1 cut(s) 2594
BsaJI CCNNGG 7 cut(s) 218, 344, 1089, 1109, 1584, 2128, 2567
BsaWI WCCGGW 2 cut(s) 361, 1785
BsaXI ACNNNNNCTCC 4 cut(s) 234, 264, 1105, 1135
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 220, 1804, 2130
Bse118I RCCGGY 1 cut(s) 1785
Bse1I ACTGG 5 cut(s) 565, 764, 1246, 1336, 1990
Bse3DI GCAATG 2 cut(s) 502, 1271
Bse8I GATNNNNATC 1 cut(s) 1899
BseBI CCWGG 4 cut(s) 1110, 1494, 1585, 2447
BseDI CCNNGG 7 cut(s) 218, 344, 1089, 1109, 1584, 2128, 2567
BseGI GGATG 9 cut(s) 73, 137, 920, 1453, 1750, 1813, 1948, 2140, 2297
BseJI GATNNNNATC 1 cut(s) 1899
BseLI CCNNNNNNNGG 4 cut(s) 124, 220, 1804, 2130
BseMI GCAATG 2 cut(s) 502, 1271
BseMII CTCAG 8 cut(s) 96, 170, 1179, 1220, 1727, 2190, 2307, 2681
BseNI ACTGG 5 cut(s) 565, 764, 1246, 1336, 1990
BseRI GAGGAG 1 cut(s) 1273
BseSI GKGCMC 1 cut(s) 2333
BseYI CCCAGC 1 cut(s) 2358
BsgI GTGCAG 1 cut(s) 1113
BshFI GGCC 2 cut(s) 725, 1631
BshNI GGYRCC 3 cut(s) 1153, 1580, 2175
BshTI ACCGGT 1 cut(s) 1785
BsiHKAI GWGCWC 3 cut(s) 824, 1596, 2514
BsiHKCI CYCGRG 2 cut(s) 219, 2568
BsiSI CCGG 2 cut(s) 362, 1786
BslFI GGGAC 1 cut(s) 718
BslI CCNNNNNNNGG 4 cut(s) 124, 220, 1804, 2130
BsmAI GTCTC 5 cut(s) 783, 896, 2071, 2314, 2594
BsmFI GGGAC 1 cut(s) 718
BsmI GAATGC 3 cut(s) 517, 621, 918
BsnI GGCC 2 cut(s) 725, 1631
Bso31I GGTCTC 1 cut(s) 2594
BsoBI CYCGRG 2 cut(s) 219, 2568
Bsp1286I GDGCHC 4 cut(s) 824, 1596, 2333, 2514
Bsp1407I TGTACA 1 cut(s) 1347
Bsp19I CCATGG 2 cut(s) 1089, 2128
BspACI CCGC 9 cut(s) 122, 245, 1216, 1221, 1485, 1657, 1838, 2271, 2576
BspANI GGCC 2 cut(s) 725, 1631
BspCNI CTCAG 8 cut(s) 97, 171, 1180, 1221, 1728, 2191, 2308, 2680
BspLI GGNNCC 6 cut(s) 352, 1155, 1582, 2177, 2522, 2574
BspMAI CTGCAG 3 cut(s) 1537, 2171, 2583
BspMI ACCTGC 3 cut(s) 871, 2163, 2405
BspPI GGATC 5 cut(s) 180, 1701, 1756, 1883, 2112
BspQI GCTCTTC 1 cut(s) 2502
BspT107I GGYRCC 3 cut(s) 1153, 1580, 2175
BspTI CTTAAG 2 cut(s) 1436, 1825
BspTNI GGTCTC 1 cut(s) 2594
BsrBI CCGCTC 2 cut(s) 245, 1218
BsrDI GCAATG 2 cut(s) 502, 1271
BsrFI RCCGGY 1 cut(s) 1785
BsrGI TGTACA 1 cut(s) 1347
BsrI ACTGG 5 cut(s) 565, 764, 1246, 1336, 1990
BssAI RCCGGY 1 cut(s) 1785
BssECI CCNNGG 7 cut(s) 218, 344, 1089, 1109, 1584, 2128, 2567
BssNI GRCGYC 1 cut(s) 707
BssSI CACGAG 1 cut(s) 2074
BssT1I CCWWGG 3 cut(s) 344, 1089, 2128
Bst2BI CACGAG 1 cut(s) 2074
Bst2UI CCWGG 4 cut(s) 1110, 1494, 1585, 2447
Bst4CI ACNGT 4 cut(s) 336, 660, 1501, 2497
Bst6I CTCTTC 6 cut(s) 12, 417, 1071, 1165, 1188, 2502
BstACI GRCGYC 1 cut(s) 707
BstAFI CTTAAG 2 cut(s) 1436, 1825
BstAPI GCANNNNNTGC 3 cut(s) 523, 2175, 2285
BstAUI TGTACA 1 cut(s) 1347
BstC8I GCNNGC 4 cut(s) 1389, 2245, 2406, 2541
BstDSI CCRYGG 2 cut(s) 1089, 2128
BstF5I GGATG 9 cut(s) 73, 137, 920, 1453, 1750, 1813, 1948, 2140, 2297
BstH2I RGCGCY 3 cut(s) 876, 1388, 2017
BstHHI GCGC 3 cut(s) 875, 1387, 2016
BstMAI GTCTC 5 cut(s) 783, 896, 2071, 2314, 2594
BstMWI GCNNNNNNNGC 5 cut(s) 205, 523, 1397, 2175, 2285
BstNI CCWGG 4 cut(s) 1110, 1494, 1585, 2447
BstNSI RCATGY 2 cut(s) 1029, 1613
BstSCI CCNGG 4 cut(s) 1108, 1492, 1583, 2445
BstSFI CTRYAG 6 cut(s) 1179, 1533, 1969, 2097, 2167, 2579
BstSLI GKGCMC 1 cut(s) 2333
BstV2I GAAGAC 4 cut(s) 24, 120, 656, 2268
BstX2I RGATCY 6 cut(s) 21, 172, 1553, 1693, 2104, 2347
BstXI CCANNNNNNTGG 3 cut(s) 1417, 1627, 2453
BstYI RGATCY 6 cut(s) 21, 172, 1553, 1693, 2104, 2347
BsuRI GGCC 2 cut(s) 725, 1631
BtgI CCRYGG 2 cut(s) 1089, 2128
BtgZI GCGATG 1 cut(s) 978
BtsCI GGATG 9 cut(s) 73, 137, 920, 1453, 1750, 1813, 1948, 2140, 2297
BtsIMutI CAGTG 2 cut(s) 528, 1185
BveI ACCTGC 3 cut(s) 871, 2163, 2405
Cac8I GCNNGC 4 cut(s) 1389, 2245, 2406, 2541
CaiI CAGNNNCTG 2 cut(s) 759, 1187
CfoI GCGC 3 cut(s) 875, 1387, 2016
Cfr10I RCCGGY 1 cut(s) 1785
CseI GACGC 2 cut(s) 152, 715
CsiI ACCWGGT 1 cut(s) 2445
Csp6I GTAC 4 cut(s) 884, 1348, 1983, 2196
CspAI ACCGGT 1 cut(s) 1785
CspCI CAANNNNNGTGG 4 cut(s) 1822, 1857, 2478, 2513
CviQI GTAC 4 cut(s) 884, 1348, 1983, 2196
DrdI GACNNNNNNGTC 2 cut(s) 658, 1661
DseDI GACNNNNNNGTC 2 cut(s) 658, 1661
EaeI YGGCCR 1 cut(s) 1629
Eam1104I CTCTTC 6 cut(s) 12, 417, 1071, 1165, 1188, 2502
EarI CTCTTC 6 cut(s) 12, 417, 1071, 1165, 1188, 2502
EciI GGCGGA 1 cut(s) 2286
Ecl136II GAGCTC 1 cut(s) 1594
Eco130I CCWWGG 3 cut(s) 344, 1089, 2128
Eco24I GRGCYC 1 cut(s) 1596
Eco31I GGTCTC 1 cut(s) 2594
Eco32I GATATC 1 cut(s) 1727
Eco47III AGCGCT 1 cut(s) 874
Eco53kI GAGCTC 1 cut(s) 1594
Eco57I CTGAAG 3 cut(s) 105, 498, 2394
Eco88I CYCGRG 2 cut(s) 219, 2568
EcoICRI GAGCTC 1 cut(s) 1594
EcoRII CCWGG 4 cut(s) 1108, 1492, 1583, 2445
EcoRV GATATC 1 cut(s) 1727
EcoT14I CCWWGG 3 cut(s) 344, 1089, 2128
EcoT22I ATGCAT 2 cut(s) 1273, 1611
EcoT38I GRGCYC 1 cut(s) 1596
ErhI CCWWGG 3 cut(s) 344, 1089, 2128
FalI AAGNNNNNCTT 8 cut(s) 859, 891, 1714, 1746, 2019, 2051, 2528, 2560
FaqI GGGAC 1 cut(s) 718
FauI CCCGC 1 cut(s) 1831
FblI GTMKAC 3 cut(s) 439, 1968, 2624
FokI GGATG 9 cut(s) 80, 124, 907, 1440, 1757, 1820, 1955, 2147, 2304
FriOI GRGCYC 1 cut(s) 1596
FspBI CTAG 4 cut(s) 191, 1929, 2351, 2699
GlaI GCGC 3 cut(s) 874, 1386, 2015
GsaI CCCAGC 1 cut(s) 2362
GsuI CTGGAG 3 cut(s) 1319, 1578, 1603
HaeII RGCGCY 3 cut(s) 876, 1388, 2017
HaeIII GGCC 2 cut(s) 725, 1631
HapII CCGG 2 cut(s) 362, 1786
HgaI GACGC 2 cut(s) 152, 715
HhaI GCGC 3 cut(s) 875, 1387, 2016
Hin1I GRCGYC 1 cut(s) 707
Hin6I GCGC 3 cut(s) 873, 1385, 2014
HinP1I GCGC 3 cut(s) 873, 1385, 2014
HincII GTYRAC 3 cut(s) 1096, 1243, 1783
HindII GTYRAC 3 cut(s) 1096, 1243, 1783
HindIII AAGCTT 2 cut(s) 1775, 2406
HpaI GTTAAC 1 cut(s) 1783
HpaII CCGG 2 cut(s) 362, 1786
HphI GGTGA 5 cut(s) 1133, 1277, 1586, 2429, 2437
Hpy166II GTNNAC 9 cut(s) 440, 1096, 1243, 1341, 1783, 1969, 2008, 2625, 2639
Hpy8I GTNNAC 9 cut(s) 440, 1096, 1243, 1341, 1783, 1969, 2008, 2625, 2639
Hpy99I CGWCG 5 cut(s) 47, 146, 318, 1038, 1644
HpyAV CCTTC 5 cut(s) 80, 224, 2024, 2134, 2207
HpyCH4III ACNGT 4 cut(s) 336, 660, 1501, 2497
HpyCH4IV ACGT 4 cut(s) 165, 1033, 1639, 2429
HpyF10VI GCNNNNNNNGC 5 cut(s) 205, 523, 1397, 2175, 2285
HpySE526I ACGT 4 cut(s) 165, 1033, 1639, 2429
Hsp92I GRCGYC 1 cut(s) 707
HspAI GCGC 3 cut(s) 873, 1385, 2014
KspAI GTTAAC 1 cut(s) 1783
LguI GCTCTTC 1 cut(s) 2502
LmnI GCTCC 3 cut(s) 242, 1223, 1559
LweI GCATC 7 cut(s) 404, 1114, 2176, 2275, 2282, 2383, 2653
MabI ACCWGGT 1 cut(s) 2445
MaeI CTAG 4 cut(s) 191, 1929, 2351, 2699
MaeII ACGT 4 cut(s) 165, 1033, 1639, 2429
MaeIII GTNAC 7 cut(s) 59, 499, 733, 755, 2417, 2425, 2651
MbiI CCGCTC 2 cut(s) 245, 1218
MflI RGATCY 6 cut(s) 21, 172, 1553, 1693, 2104, 2347
MhlI GDGCHC 4 cut(s) 824, 1596, 2333, 2514
MlsI TGGCCA 1 cut(s) 1631
MluCI AATT 6 cut(s) 533, 771, 1302, 1513, 1855, 1860
MluNI TGGCCA 1 cut(s) 1631
MlyI GAGTC 2 cut(s) 754, 2510
MmeI TCCRAC 2 cut(s) 165, 766
Mox20I TGGCCA 1 cut(s) 1631
Mph1103I ATGCAT 2 cut(s) 1273, 1611
MroXI GAANNNNTTC 2 cut(s) 263, 2034
MscI TGGCCA 1 cut(s) 1631
MslI CAYNNNNRTG 5 cut(s) 288, 1024, 1146, 2133, 2718
Msp20I TGGCCA 1 cut(s) 1631
MspA1I CMGCKG 1 cut(s) 2578
MspCI CTTAAG 2 cut(s) 1436, 1825
MspI CCGG 2 cut(s) 362, 1786
MspR9I CCNGG 4 cut(s) 1110, 1494, 1585, 2447
Mva1269I GAATGC 3 cut(s) 517, 621, 918
MvaI CCWGG 4 cut(s) 1110, 1494, 1585, 2447
MwoI GCNNNNNNNGC 5 cut(s) 205, 523, 1397, 2175, 2285
NcoI CCATGG 2 cut(s) 1089, 2128
NlaIV GGNNCC 6 cut(s) 352, 1155, 1582, 2177, 2522, 2574
NmuCI GTSAC 2 cut(s) 2417, 2425
NsiI ATGCAT 2 cut(s) 1273, 1611
NspI RCATGY 2 cut(s) 1029, 1613
PaqCI CACCTGC 2 cut(s) 2163, 2405
PciSI GCTCTTC 1 cut(s) 2502
PcsI WCGNNNNNNNCGW 2 cut(s) 51, 2469
PctI GAATGC 3 cut(s) 517, 621, 918
PdmI GAANNNNTTC 2 cut(s) 263, 2034
PfeI GAWTC 8 cut(s) 47, 71, 80, 293, 796, 941, 1900, 2474
PfoI TCCNGGA 1 cut(s) 1492
PinAI ACCGGT 1 cut(s) 1785
PleI GAGTC 2 cut(s) 753, 2509
PpsI GAGTC 2 cut(s) 753, 2509
PsiI TTATAA 1 cut(s) 2631
Psp124BI GAGCTC 1 cut(s) 1596
Psp6I CCWGG 4 cut(s) 1108, 1492, 1583, 2445
PspFI CCCAGC 1 cut(s) 2358
PspGI CCWGG 4 cut(s) 1108, 1492, 1583, 2445
PspN4I GGNNCC 6 cut(s) 352, 1155, 1582, 2177, 2522, 2574
PstI CTGCAG 3 cut(s) 1537, 2171, 2583
PstNI CAGNNNCTG 2 cut(s) 759, 1187
PsuI RGATCY 6 cut(s) 21, 172, 1553, 1693, 2104, 2347
RsaI GTAC 4 cut(s) 885, 1349, 1984, 2197
RsaNI GTAC 4 cut(s) 884, 1348, 1983, 2196
RseI CAYNNNNRTG 5 cut(s) 288, 1024, 1146, 2133, 2718
SacI GAGCTC 1 cut(s) 1596
SapI GCTCTTC 1 cut(s) 2502
ScaI AGTACT 1 cut(s) 1984
SchI GAGTC 2 cut(s) 754, 2510
ScrFI CCNGG 4 cut(s) 1110, 1494, 1585, 2447
SduI GDGCHC 4 cut(s) 824, 1596, 2333, 2514
SexAI ACCWGGT 1 cut(s) 2445
SfaNI GCATC 7 cut(s) 404, 1114, 2176, 2275, 2282, 2383, 2653
SfcI CTRYAG 6 cut(s) 1179, 1533, 1969, 2097, 2167, 2579
SmiMI CAYNNNNRTG 5 cut(s) 288, 1024, 1146, 2133, 2718
SmlI CTYRAG 3 cut(s) 75, 1436, 1825
SmoI CTYRAG 3 cut(s) 75, 1436, 1825
Sse9I AATT 6 cut(s) 533, 771, 1302, 1513, 1855, 1860
SsiI CCGC 9 cut(s) 122, 245, 1216, 1221, 1485, 1657, 1838, 2271, 2576
SspI AATATT 1 cut(s) 406
SspMI CTAG 4 cut(s) 191, 1929, 2351, 2699
SstI GAGCTC 1 cut(s) 1596
StyD4I CCNGG 4 cut(s) 1108, 1492, 1583, 2445
StyI CCWWGG 3 cut(s) 344, 1089, 2128
TaaI ACNGT 4 cut(s) 336, 660, 1501, 2497
TaiI ACGT 4 cut(s) 168, 1036, 1642, 2432
TasI AATT 6 cut(s) 533, 771, 1302, 1513, 1855, 1860
TatI WGTACW 2 cut(s) 1347, 1982
TauI GCSGC 2 cut(s) 248, 1488
TfiI GAWTC 8 cut(s) 47, 71, 80, 293, 796, 941, 1900, 2474
TscAI CASTG 2 cut(s) 528, 1192
TseFI GTSAC 2 cut(s) 2417, 2425
Tsp45I GTSAC 2 cut(s) 2417, 2425
TspDTI ATGAA 7 cut(s) 30, 126, 432, 559, 1008, 2070, 2169
TspGWI ACGGA 3 cut(s) 264, 2078, 2374
TspRI CASTG 2 cut(s) 528, 1192
Vha464I CTTAAG 2 cut(s) 1436, 1825
XapI RAATTY 2 cut(s) 533, 1855
XceI RCATGY 2 cut(s) 1029, 1613
XmiI GTMKAC 3 cut(s) 439, 1968, 2624
XmnI GAANNNNTTC 2 cut(s) 263, 2034
XspI CTAG 4 cut(s) 191, 1929, 2351, 2699
ZrmI AGTACT 1 cut(s) 1984
Zsp2I ATGCAT 2 cut(s) 1273, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.