pycom05g07290

DNA repair and recombination protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
10284046 .. 10291854
7809 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g07290.19

Sequence Viewer

Length: 2853 bp
ATGGAGGAAGAAGATGAAGTTCTCTCAATCTCCGACGCCTCCGGTTCATCCGATTCCTCCTCCGAATCCAGCGAGGAGTACTCGGCTGACCAAGAAGAGCTAGACCAAGAAGAAGAAGAAGACCGCCAAAACGACTTCGTGGTGGTCGAGAATAATCGAAAACCCATAGACCCTCCTCGGCCCTCCGCCGAAGATCGGAAATTGAAGAACGTCGACGCTCTCGTCAGAGGTAACCTTGTCGTGAAAAGGCAGCCACTGCTTCCTCGAGTTCTCTCAGTGACGGAAGGAGCAGCAGTTTGTAGGAAACCCTTTAAACCTCCATGCTCTATTGGCTATGAGGATGGAACTGAACAGCTCGCGCGTCGTCTCTGTGCACGTAGACGATTTGTTCCCTGGGGCTCATCAACTGCAGCATTCATTCCACATATTAATATGAATTTGAGTATAGAAAATGAGGGTGAGAAAGATCCAGTGGAAGAGAGTGTGACACTACCTACCGGAATTGATCCTTTGGTCTTGTGGCAATCTGAAGAATTCGAAATTGCGGCTTCTAATATGGTGCAGATAGTAGTGGACCCAGTGCTTGTTCGTTTCCTTCGACCACATCAAAGAGAAGGCGTTCAGTTTATGTTTGAATGTGTTTCAGGGTTAAATAGTGCATCAAATATATATGGATGCATTCTGGCAGATGATATGGGTTTGGGAAAGACATTGCAGTCTATCACATTACTATATACTCTTCTATGTCAAGGGTTTGATGGGAAACCAATGGTTAAAAAGGCCATTATAGTCACCCCTACCAGTCTTGTGAGCAACTGGGAGGCTGAAATAAAGAAGTGGGTTGGAGAAAGAGTTAATCTTATTGCCCTTTGTGAAAGTACCAGAGATGATGTTGTTTCTGGAATTGATCGGTTCACAAGTCCTCACGGCCATGTACAGGTACTGATTGTTTCATATGAGACATTTCGGATGCATTCTGCAAAATTTAGCCAAAGCGAGTCCTGTGACCTTCTCATATGTGATGAGGCTCACCGTCTGAAGAATGATCAGACAATGACGAATCGGGCTTTGGCTGCTCTTTCATGCAAGCGGCGTATTCTGTTGTCGGGAACTCCAATGCAGAATGACCTAGAAGAGTTCTTTGCCATGGTCAATTTTACTAATCCGGGAATCTTAGGTGATGCTGCATATTTTCGCCGCTACTATGAGGCACCCATTATTTGTGGAAGAGAACCTAATGCCTCTGAAAAAGAGAGGAAGCTAAGTGTTGAGCGATCAGCTGAACTAAGTGGAACAGTAAATCAGTTTATTTTGCGGCGGACTAATGCACTACTATCAAACCACCTCCCACCAAAGATAATTGAAGTTGTTTGTTGCAAGTTGACTCCTCTCCAAATAGACATATACAACCATTTCATACATTCCAAAAATGTTAAACGAGCAATTTCTGAAGACACGAAGCAATCAAAGATTTTGGCTTATATTACAGCTCTTAAGAAGCTATGCAATCATCCAAAGCTCATCTATGATACTATAAGAAGTGGAAGTCCGGGAACTTCAGGTTTTGAGGACTGTATTCGCTTTTTCCCTCCAGATATGTTTTCTGGAAGATCTGGATCATGGACTGGCGGGGATGGTGCTTGGGTTGAACTGTCCGGAAAAATGCATGTTTTAGCTCGGTTACTGGCCCATTTACGTAAGAAGACTGATGACCGTATTGTCCTTGTCTCAAACTATACGCAGACACTGGACCTTTTTGCGCAATTGTGTCGAGAAAGAAGATACCCATATTTGAGGCTTGACGGAACCACATCTATCAGTAAAAGACAGAAATTAGTAAACCATTTCAATGACCCCTCAAAGGATGAATTTGTATTTCTCTTAAGCAGCAAGGCTGGTGGTTGTGGTCTTAATTTAATAGGTGGAAATCGGCTAGTTTTGTTTGATCCTGACTGGAATCCTGCCAACGATAAACAAGCTGCTGCAAGAGTTTGGAGGGATGGGCAAAAGAAGAGAGTATACATTTACAGATTTTTGAGTACTGGAACAATTGAAGAAAAGGTGTACCAGCGCCAGATGTCAAAAGAAGGGCTTCAAAAGGTTATTCAGCACGAACAAACAGATAACCCGAAGGCACAGGGAAACCTTCTTTCAACAGAAGACCTGCGCGATCTATTCACATTTCATGAGAATGTGAGGTCTGACGTGCATGAGAAGATGAACTGCATCCGTTGCCAAAATACCAATGATACACCTCAGACCACAGCCGAGGGAGAAGCAAACGAATCAACCAATCAAAATGGTCAGTCTGGGCAAGTAATATCTGATATAGGTGGATTTGCAGAACGTGCTGGATGCTTCCATGAATTAAAGAGCTCGGAGAAGCAGGTAGGGACACCTGTAGAAGAAGATCTAAGTAATTGGGGGCACCATTTCTCCCCAACTTCAGTACCTGATTCTATTCTCCAAGCTTCAGCTGGAGATGAGGTCACATTTGTGTTTACAAACCAAGTGGATGGGAAGCTTGTACCAATTGAATCAAAAGTAAGCCCAAAGATTCAGGAACAAGAAGGAAAAGAGAACTGTCCCAGATTAAAACAAAACCTGAACCAGAAATCCGTGCCATTGTCCTGGCAAAGAAAACCGCTCGAATCTGTGTCTTCGGGTGAAAATTCTATCAGAAACACATCTGCCCCTTTCAAGCCCTCAGAAAAGTCCACCGTGAAATCAGTAAAAACTTCTTTGAAGGGTCCAGTGCATGTTGCATTAACGCCTAAACTGTCTATTAACAATCGATTGCCCCAGAAAAGATCGTCTCCTGATTCTGTGGAACACGACGACGATTTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000280 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006311 GO:0006325 GO:0006338 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015616 GO:0016043 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0030491 GO:0030702 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0033170 GO:0033554 GO:0034641 GO:0035822 GO:0035825 GO:0035861 GO:0040029 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045003 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048285 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051321 GO:0051701 GO:0051704 GO:0051716 GO:0060255 GO:0061806 GO:0061982 GO:0065007 GO:0070887 GO:0071214 GO:0071241 GO:0071248 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0104004 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1902679 GO:1903046 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

951

Amino Acids

106.41

Weight (kDa)

6.04

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 221, 715, 1718
Acc16I TGCGCA 1 cut(s) 1761
Acc36I ACCTGC 2 cut(s) 2172, 2377
AccB1I GGYRCC 2 cut(s) 1210, 2427
AccBSI CCGCTC 1 cut(s) 2647
AccI GTMKAC 3 cut(s) 213, 379, 2019
AccII CGCG 3 cut(s) 359, 361, 2169
AccIII TCCGGA 1 cut(s) 1655
AciI CCGC 9 cut(s) 124, 186, 545, 1090, 1198, 1315, 1318, 1629, 2645
AclWI GGATC 4 cut(s) 461, 500, 1624, 1940
AcoI YGGCCR 1 cut(s) 928
AcsI RAATTY 5 cut(s) 436, 533, 983, 1868, 2671
AcuI CTGAAG 6 cut(s) 549, 1058, 1470, 1542, 2430, 2457
AcyI GRCGYC 1 cut(s) 36
AfaI GTAC 8 cut(s) 80, 880, 936, 942, 2041, 2066, 2451, 2529
AfiI CCNNNNNNNGG 3 cut(s) 195, 937, 1861
AflII CTTAAG 2 cut(s) 1493, 1882
AjiI CACGTC 1 cut(s) 2206
AjnI CCWGG 2 cut(s) 392, 2630
AjuI GAANNNNNNNTTGG 2 cut(s) 1052, 1084
AleI CACNNNNGTG 1 cut(s) 2495
AloI GAACNNNNNNTCC 2 cut(s) 2600, 2632
Alw21I GWGCWC 2 cut(s) 376, 2378
Alw26I GTCTC 4 cut(s) 371, 953, 1732, 2820
Alw44I GTGCAC 1 cut(s) 372
AlwI GGATC 4 cut(s) 461, 500, 1624, 1940
AlwNI CAGNNNCTG 4 cut(s) 256, 943, 1747, 2453
Ama87I CYCGRG 1 cut(s) 264
Aor13HI TCCGGA 1 cut(s) 1655
AoxI GGCC 4 cut(s) 179, 780, 928, 1686
ApaLI GTGCAC 1 cut(s) 372
ApeKI GCWGC 8 cut(s) 250, 290, 410, 1073, 1184, 1887, 1979, 1982
ApoI RAATTY 5 cut(s) 436, 533, 983, 1868, 2671
ArsI GACNNNNNNTTYG 1 cut(s) 2828
AseI ATTAAT 1 cut(s) 429
Asp700I GAANNNNTTC 2 cut(s) 618, 2091
AspLEI GCGC 4 cut(s) 361, 1762, 2073, 2169
AspS9I GGNCC 5 cut(s) 180, 574, 1687, 1750, 2750
AsuC2I CCSGG 2 cut(s) 1167, 1551
AsuHPI GGTGA 5 cut(s) 470, 784, 1022, 1190, 2678
AsuII TTCGAA 1 cut(s) 537
AvaI CYCGRG 1 cut(s) 264
AvaII GGWCC 3 cut(s) 574, 1750, 2750
BaeGI GKGCMC 2 cut(s) 376, 2430
BaeI ACNNNNGTAYC 2 cut(s) 2433, 2466
BanI GGYRCC 2 cut(s) 1210, 2427
BanII GRGCYC 2 cut(s) 401, 2378
BarI GAAGNNNNNNTAC 2 cut(s) 2003, 2035
BbsI GAAGAC 5 cut(s) 126, 1458, 1709, 2166, 2652
Bbv12I GWGCWC 2 cut(s) 376, 2378
BbvI GCAGC 8 cut(s) 262, 302, 422, 1060, 1171, 1899, 1966, 1969
BccI CCATC 5 cut(s) 335, 752, 1628, 1994, 2510
BceAI ACGGC 1 cut(s) 943
BcgI CGANNNNNNTGC 2 cut(s) 1751, 1785
BciT130I CCWGG 2 cut(s) 394, 2632
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 2 cut(s) 1167, 1551
BcoDI GTCTC 4 cut(s) 371, 953, 1732, 2820
BfaI CTAG 3 cut(s) 101, 1130, 1934
BfmI CTRYAG 2 cut(s) 408, 2400
BfoI RGCGCY 1 cut(s) 2074
BfrI CTTAAG 2 cut(s) 1493, 1882
BfuAI ACCTGC 2 cut(s) 2172, 2377
BglII AGATCT 2 cut(s) 1610, 2410
BmcAI AGTACT 2 cut(s) 80, 2041
Bme1390I CCNGG 4 cut(s) 394, 1167, 1551, 2632
Bme18I GGWCC 3 cut(s) 574, 1750, 2750
BmeT110I CYCGRG 1 cut(s) 264
BmgBI CACGTC 1 cut(s) 2206
BmgT120I GGNCC 5 cut(s) 180, 574, 1687, 1750, 2750
BmiI GGNNCC 5 cut(s) 576, 1212, 1807, 2429, 2751
BmrFI CCNGG 4 cut(s) 394, 1167, 1551, 2632
BmrI ACTGGG 2 cut(s) 572, 826
BmsI GCATC 6 cut(s) 665, 668, 960, 1171, 2235, 2345
BmuI ACTGGG 2 cut(s) 572, 826
BpiI GAAGAC 5 cut(s) 126, 1458, 1709, 2166, 2652
BplI GAGNNNNNCTC 2 cut(s) 65, 97
BpmI CTGGAG 2 cut(s) 1575, 2499
Bpu14I TTCGAA 1 cut(s) 537
BpuMI CCSGG 2 cut(s) 1167, 1551
Bsa29I ATCGAT 1 cut(s) 2794
BsaAI YACGTR 2 cut(s) 377, 1697
BsaBI GATNNNNATC 1 cut(s) 1615
BsaHI GRCGYC 1 cut(s) 36
BsaJI CCNNGG 5 cut(s) 176, 392, 393, 1146, 2268
BsaWI WCCGGW 3 cut(s) 41, 497, 1655
BsaXI ACNNNNNCTCC 8 cut(s) 279, 309, 837, 867, 2420, 2450, 2472, 2502
Bsc4I CCNNNNNNNGG 3 cut(s) 195, 937, 1861
Bse3DI GCAATG 1 cut(s) 710
Bse8I GATNNNNATC 1 cut(s) 1615
BseAI TCCGGA 1 cut(s) 1655
BseBI CCWGG 2 cut(s) 394, 2632
BseCI ATCGAT 1 cut(s) 2794
BseDI CCNNGG 5 cut(s) 176, 392, 393, 1146, 2268
BseJI GATNNNNATC 1 cut(s) 1615
BseLI CCNNNNNNNGG 3 cut(s) 195, 937, 1861
BseMI GCAATG 1 cut(s) 710
BseMII CTCAG 3 cut(s) 288, 2270, 2721
BseRI GAGGAG 4 cut(s) 49, 89, 165, 1377
BseSI GKGCMC 2 cut(s) 376, 2430
BseXI GCAGC 8 cut(s) 262, 302, 422, 1060, 1171, 1899, 1966, 1969
BsgI GTGCAG 1 cut(s) 581
Bsh1236I CGCG 3 cut(s) 359, 361, 2169
BshFI GGCC 4 cut(s) 181, 782, 930, 1688
BshNI GGYRCC 2 cut(s) 1210, 2427
BshVI ATCGAT 1 cut(s) 2794
BsiHKAI GWGCWC 2 cut(s) 376, 2378
BsiHKCI CYCGRG 1 cut(s) 264
BsiSI CCGG 5 cut(s) 42, 498, 1166, 1550, 1656
BslFI GGGAC 2 cut(s) 2407, 2571
BslI CCNNNNNNNGG 3 cut(s) 195, 937, 1861
BsmAI GTCTC 4 cut(s) 371, 953, 1732, 2820
BsmBI CGTCTC 2 cut(s) 371, 2820
BsmFI GGGAC 2 cut(s) 2407, 2571
BsmI GAATGC 3 cut(s) 413, 678, 973
BsnI GGCC 4 cut(s) 181, 782, 930, 1688
BsoBI CYCGRG 1 cut(s) 264
Bsp119I TTCGAA 1 cut(s) 537
Bsp1286I GDGCHC 4 cut(s) 376, 401, 2378, 2430
Bsp13I TCCGGA 1 cut(s) 1655
Bsp1407I TGTACA 1 cut(s) 934
Bsp19I CCATGG 1 cut(s) 1146
BspACI CCGC 9 cut(s) 124, 186, 545, 1090, 1198, 1315, 1318, 1629, 2645
BspANI GGCC 4 cut(s) 181, 782, 930, 1688
BspCNI CTCAG 3 cut(s) 287, 2269, 2720
BspDI ATCGAT 1 cut(s) 2794
BspEI TCCGGA 1 cut(s) 1655
BspFNI CGCG 3 cut(s) 359, 361, 2169
BspHI TCATGA 1 cut(s) 2185
BspLI GGNNCC 5 cut(s) 576, 1212, 1807, 2429, 2751
BspMAI CTGCAG 1 cut(s) 412
BspMI ACCTGC 2 cut(s) 2172, 2377
BspPI GGATC 4 cut(s) 461, 500, 1624, 1940
BspQI GCTCTTC 1 cut(s) 90
BspT104I TTCGAA 1 cut(s) 537
BspT107I GGYRCC 2 cut(s) 1210, 2427
BspTI CTTAAG 2 cut(s) 1493, 1882
BsrBI CCGCTC 1 cut(s) 2647
BsrDI GCAATG 1 cut(s) 710
BsrGI TGTACA 1 cut(s) 934
BssECI CCNNGG 5 cut(s) 176, 392, 393, 1146, 2268
BssNAI GTATAC 1 cut(s) 2020
BssNI GRCGYC 1 cut(s) 36
BssT1I CCWWGG 1 cut(s) 1146
Bst1107I GTATAC 1 cut(s) 2020
Bst2UI CCWGG 2 cut(s) 394, 2632
Bst4CI ACNGT 8 cut(s) 1034, 1297, 1574, 1653, 1715, 2585, 2722, 2781
Bst6I CTCTTC 6 cut(s) 90, 471, 744, 1128, 1222, 2006
BstACI GRCGYC 1 cut(s) 36
BstAFI CTTAAG 2 cut(s) 1493, 1882
BstAPI GCANNNNNTGC 3 cut(s) 256, 2232, 2348
BstAUI TGTACA 1 cut(s) 934
BstBAI YACGTR 2 cut(s) 377, 1697
BstBI TTCGAA 1 cut(s) 537
BstC8I GCNNGC 2 cut(s) 357, 1088
BstDEI CTNAG 7 cut(s) 274, 1174, 1262, 1286, 2256, 2414, 2707
BstDSI CCRYGG 1 cut(s) 1146
BstEII GGTNACC 1 cut(s) 230
BstFNI CGCG 3 cut(s) 359, 361, 2169
BstH2I RGCGCY 1 cut(s) 2074
BstHHI GCGC 4 cut(s) 361, 1762, 2073, 2169
BstMAI GTCTC 4 cut(s) 371, 953, 1732, 2820
BstMWI GCNNNNNNNGC 5 cut(s) 256, 330, 1073, 2232, 2348
BstNI CCWGG 2 cut(s) 394, 2632
BstNSI RCATGY 2 cut(s) 1670, 2762
BstPI GGTNACC 1 cut(s) 230
BstSCI CCNGG 4 cut(s) 392, 1165, 1549, 2630
BstSFI CTRYAG 2 cut(s) 408, 2400
BstSLI GKGCMC 2 cut(s) 376, 2430
BstSNI TACGTA 1 cut(s) 1697
BstUI CGCG 3 cut(s) 359, 361, 2169
BstV1I GCAGC 8 cut(s) 262, 302, 422, 1060, 1171, 1899, 1966, 1969
BstV2I GAAGAC 5 cut(s) 126, 1458, 1709, 2166, 2652
BstX2I RGATCY 3 cut(s) 466, 1610, 2410
BstXI CCANNNNNNTGG 2 cut(s) 2516, 2631
BstYI RGATCY 3 cut(s) 466, 1610, 2410
BstZ17I GTATAC 1 cut(s) 2020
Bsu15I ATCGAT 1 cut(s) 2794
BsuRI GGCC 4 cut(s) 181, 782, 930, 1688
BsuTUI ATCGAT 1 cut(s) 2794
BtgI CCRYGG 1 cut(s) 1146
BtrI CACGTC 1 cut(s) 2206
BtsI GCAGTG 1 cut(s) 254
BtsIMutI CAGTG 6 cut(s) 254, 282, 477, 585, 1745, 2760
BveI ACCTGC 2 cut(s) 2172, 2377
Cac8I GCNNGC 2 cut(s) 357, 1088
CaiI CAGNNNCTG 4 cut(s) 256, 943, 1747, 2453
CciI TCATGA 1 cut(s) 2185
CfoI GCGC 4 cut(s) 361, 1762, 2073, 2169
Cfr13I GGNCC 5 cut(s) 180, 574, 1687, 1750, 2750
ClaI ATCGAT 1 cut(s) 2794
CseI GACGC 3 cut(s) 44, 224, 350
Csp6I GTAC 8 cut(s) 79, 879, 935, 941, 2040, 2065, 2450, 2528
CspCI CAANNNNNGTGG 4 cut(s) 1879, 1914, 2493, 2528
CviQI GTAC 8 cut(s) 79, 879, 935, 941, 2040, 2065, 2450, 2528
DdeI CTNAG 7 cut(s) 274, 1174, 1262, 1286, 2256, 2414, 2707
DraI TTTAAA 1 cut(s) 313
DrdI GACNNNNNNGTC 3 cut(s) 221, 715, 1718
DseDI GACNNNNNNGTC 3 cut(s) 221, 715, 1718
EaeI YGGCCR 1 cut(s) 928
Eam1104I CTCTTC 6 cut(s) 90, 471, 744, 1128, 1222, 2006
EarI CTCTTC 6 cut(s) 90, 471, 744, 1128, 1222, 2006
EciI GGCGGA 2 cut(s) 175, 1333
Ecl136II GAGCTC 1 cut(s) 2376
Eco105I TACGTA 1 cut(s) 1697
Eco130I CCWWGG 1 cut(s) 1146
Eco24I GRGCYC 2 cut(s) 401, 2378
Eco47I GGWCC 3 cut(s) 574, 1750, 2750
Eco53kI GAGCTC 1 cut(s) 2376
Eco57I CTGAAG 6 cut(s) 549, 1058, 1470, 1542, 2430, 2457
Eco88I CYCGRG 1 cut(s) 264
Eco91I GGTNACC 1 cut(s) 230
EcoICRI GAGCTC 1 cut(s) 2376
EcoO65I GGTNACC 1 cut(s) 230
EcoRI GAATTC 1 cut(s) 533
EcoRII CCWGG 2 cut(s) 392, 2630
EcoT14I CCWWGG 1 cut(s) 1146
EcoT22I ATGCAT 3 cut(s) 680, 975, 1668
EcoT38I GRGCYC 2 cut(s) 401, 2378
ErhI CCWWGG 1 cut(s) 1146
Esp3I CGTCTC 2 cut(s) 371, 2820
FalI AAGNNNNNCTT 2 cut(s) 2076, 2108
FaqI GGGAC 2 cut(s) 2407, 2571
FauI CCCGC 1 cut(s) 1622
FauNDI CATATG 2 cut(s) 955, 1016
FbaI TGATCA 1 cut(s) 1045
FblI GTMKAC 3 cut(s) 213, 379, 2019
FriOI GRGCYC 2 cut(s) 401, 2378
FspBI CTAG 3 cut(s) 101, 1130, 1934
FspI TGCGCA 1 cut(s) 1761
GlaI GCGC 4 cut(s) 360, 1761, 2072, 2168
GsuI CTGGAG 2 cut(s) 1575, 2499
HaeII RGCGCY 1 cut(s) 2074
HaeIII GGCC 4 cut(s) 181, 782, 930, 1688
HapII CCGG 5 cut(s) 42, 498, 1166, 1550, 1656
HgaI GACGC 3 cut(s) 44, 224, 350
HhaI GCGC 4 cut(s) 361, 1762, 2073, 2169
Hin1I GRCGYC 1 cut(s) 36
Hin6I GCGC 4 cut(s) 359, 1760, 2071, 2167
HinP1I GCGC 4 cut(s) 359, 1760, 2071, 2167
HincII GTYRAC 2 cut(s) 214, 1383
HindII GTYRAC 2 cut(s) 214, 1383
HindIII AAGCTT 2 cut(s) 2469, 2522
HpaII CCGG 5 cut(s) 42, 498, 1166, 1550, 1656
HphI GGTGA 5 cut(s) 470, 784, 1022, 1190, 2678
Hpy99I CGWCG 6 cut(s) 38, 215, 218, 366, 2840, 2843
HpyAV CCTTC 9 cut(s) 278, 605, 608, 1019, 2081, 2125, 2156, 2564, 2740
HpyCH4III ACNGT 8 cut(s) 1034, 1297, 1574, 1653, 1715, 2585, 2722, 2781
HpyCH4IV ACGT 5 cut(s) 210, 376, 1696, 2205, 2347
HpyF10VI GCNNNNNNNGC 5 cut(s) 256, 330, 1073, 2232, 2348
HpyF3I CTNAG 7 cut(s) 274, 1174, 1262, 1286, 2256, 2414, 2707
HpySE526I ACGT 5 cut(s) 210, 376, 1696, 2205, 2347
Hsp92I GRCGYC 1 cut(s) 36
HspAI GCGC 4 cut(s) 359, 1760, 2071, 2167
Kpn2I TCCGGA 1 cut(s) 1655
Ksp22I TGATCA 1 cut(s) 1045
LguI GCTCTTC 1 cut(s) 90
LmnI GCTCC 1 cut(s) 287
Lsp1109I GCAGC 8 cut(s) 262, 302, 422, 1060, 1171, 1899, 1966, 1969
LweI GCATC 6 cut(s) 665, 668, 960, 1171, 2235, 2345
MaeI CTAG 3 cut(s) 101, 1130, 1934
MaeII ACGT 5 cut(s) 210, 376, 1696, 2205, 2347
MaeIII GTNAC 7 cut(s) 230, 277, 484, 790, 1004, 1680, 2488
MbiI CCGCTC 1 cut(s) 2647
MfeI CAATTG 3 cut(s) 1763, 2049, 2532
MflI RGATCY 3 cut(s) 466, 1610, 2410
MhlI GDGCHC 4 cut(s) 376, 401, 2378, 2430
MlyI GAGTC 2 cut(s) 1007, 1378
MmeI TCCRAC 2 cut(s) 57, 823
Mph1103I ATGCAT 3 cut(s) 680, 975, 1668
MroI TCCGGA 1 cut(s) 1655
MroXI GAANNNNTTC 2 cut(s) 618, 2091
MslI CAYNNNNRTG 4 cut(s) 930, 1848, 2190, 2495
MspA1I CMGCKG 2 cut(s) 1280, 2477
MspCI CTTAAG 2 cut(s) 1493, 1882
MspI CCGG 5 cut(s) 42, 498, 1166, 1550, 1656
MspR9I CCNGG 4 cut(s) 394, 1167, 1551, 2632
MunI CAATTG 3 cut(s) 1763, 2049, 2532
Mva1269I GAATGC 3 cut(s) 413, 678, 973
MvaI CCWGG 2 cut(s) 394, 2632
MvnI CGCG 3 cut(s) 359, 361, 2169
MwoI GCNNNNNNNGC 5 cut(s) 256, 330, 1073, 2232, 2348
NciI CCSGG 2 cut(s) 1167, 1551
NcoI CCATGG 1 cut(s) 1146
NdeI CATATG 2 cut(s) 955, 1016
NlaIV GGNNCC 5 cut(s) 576, 1212, 1807, 2429, 2751
NmeAIII GCCGAG 3 cut(s) 62, 157, 2293
NmuCI GTSAC 5 cut(s) 277, 484, 790, 1004, 2488
NsbI TGCGCA 1 cut(s) 1761
NsiI ATGCAT 3 cut(s) 680, 975, 1668
NspI RCATGY 2 cut(s) 1670, 2762
NspV TTCGAA 1 cut(s) 537
OliI CACNNNNGTG 1 cut(s) 2495
PaeR7I CTCGAG 1 cut(s) 264
PagI TCATGA 1 cut(s) 2185
PasI CCCWGGG 1 cut(s) 393
PciSI GCTCTTC 1 cut(s) 90
PcsI WCGNNNNNNNCGW 3 cut(s) 144, 219, 595
PctI GAATGC 3 cut(s) 413, 678, 973
PdmI GAANNNNTTC 2 cut(s) 618, 2091
PfoI TCCNGGA 2 cut(s) 1165, 1549
PleI GAGTC 2 cut(s) 1006, 1378
PpsI GAGTC 2 cut(s) 1006, 1378
Ppu21I YACGTR 2 cut(s) 377, 1697
PshBI ATTAAT 1 cut(s) 429
Psp124BI GAGCTC 1 cut(s) 2378
Psp6I CCWGG 2 cut(s) 392, 2630
PspEI GGTNACC 1 cut(s) 230
PspGI CCWGG 2 cut(s) 392, 2630
PspN4I GGNNCC 5 cut(s) 576, 1212, 1807, 2429, 2751
PspPI GGNCC 5 cut(s) 180, 574, 1687, 1750, 2750
PspXI VCTCGAGB 1 cut(s) 264
PstI CTGCAG 1 cut(s) 412
PstNI CAGNNNCTG 4 cut(s) 256, 943, 1747, 2453
PsuI RGATCY 3 cut(s) 466, 1610, 2410
PvuII CAGCTG 2 cut(s) 1280, 2477
RsaI GTAC 8 cut(s) 80, 880, 936, 942, 2041, 2066, 2451, 2529
RsaNI GTAC 8 cut(s) 79, 879, 935, 941, 2040, 2065, 2450, 2528
RseI CAYNNNNRTG 4 cut(s) 930, 1848, 2190, 2495
SacI GAGCTC 1 cut(s) 2378
SalI GTCGAC 1 cut(s) 212
SapI GCTCTTC 1 cut(s) 90
Sau96I GGNCC 5 cut(s) 180, 574, 1687, 1750, 2750
ScaI AGTACT 2 cut(s) 80, 2041
SchI GAGTC 2 cut(s) 1007, 1378
ScrFI CCNGG 4 cut(s) 394, 1167, 1551, 2632
SduI GDGCHC 4 cut(s) 376, 401, 2378, 2430
SfaNI GCATC 6 cut(s) 665, 668, 960, 1171, 2235, 2345
SfcI CTRYAG 2 cut(s) 408, 2400
Sfr274I CTCGAG 1 cut(s) 264
SfuI TTCGAA 1 cut(s) 537
SgrDI CGTCGACG 1 cut(s) 212
SinI GGWCC 3 cut(s) 574, 1750, 2750
SlaI CTCGAG 1 cut(s) 264
SmiMI CAYNNNNRTG 4 cut(s) 930, 1848, 2190, 2495
SmlI CTYRAG 3 cut(s) 264, 1493, 1882
SmoI CTYRAG 3 cut(s) 264, 1493, 1882
SnaBI TACGTA 1 cut(s) 1697
SsiI CCGC 9 cut(s) 124, 186, 545, 1090, 1198, 1315, 1318, 1629, 2645
SspMI CTAG 3 cut(s) 101, 1130, 1934
SstI GAGCTC 1 cut(s) 2378
StyD4I CCNGG 4 cut(s) 392, 1165, 1549, 2630
StyI CCWWGG 1 cut(s) 1146
TaaI ACNGT 8 cut(s) 1034, 1297, 1574, 1653, 1715, 2585, 2722, 2781
TaiI ACGT 5 cut(s) 213, 379, 1699, 2208, 2350
TaqI TCGA 9 cut(s) 147, 157, 213, 265, 537, 598, 1771, 2649, 2794
TatI WGTACW 3 cut(s) 78, 934, 2039
TauI GCSGC 4 cut(s) 548, 1093, 1200, 1318
TscAI CASTG 6 cut(s) 261, 282, 477, 585, 1752, 2760
TseFI GTSAC 5 cut(s) 277, 484, 790, 1004, 2488
TseI GCWGC 8 cut(s) 250, 290, 410, 1073, 1184, 1887, 1979, 1982
Tsp45I GTSAC 5 cut(s) 277, 484, 790, 1004, 2488
TspGWI ACGGA 4 cut(s) 296, 1818, 2219, 2608
TspRI CASTG 6 cut(s) 261, 282, 477, 585, 1752, 2760
Vha464I CTTAAG 2 cut(s) 1493, 1882
VneI GTGCAC 1 cut(s) 372
VpaK11BI GGWCC 3 cut(s) 574, 1750, 2750
VspI ATTAAT 1 cut(s) 429
XapI RAATTY 5 cut(s) 436, 533, 983, 1868, 2671
XceI RCATGY 2 cut(s) 1670, 2762
XcmI CCANNNNNNNNNTGG 1 cut(s) 2474
XhoI CTCGAG 1 cut(s) 264
XmiI GTMKAC 3 cut(s) 213, 379, 2019
XmnI GAANNNNTTC 2 cut(s) 618, 2091
XspI CTAG 3 cut(s) 101, 1130, 1934
ZrmI AGTACT 2 cut(s) 80, 2041
Zsp2I ATGCAT 3 cut(s) 680, 975, 1668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.