Prupe.8G123600_v2.0.a1

DNA repair and recombination protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0008727
Physical Location & Seq
Reverse (-)
14936364 .. 14945505
9142 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G123600.1

Sequence Viewer

Length: 2832 bp
ATGGAGAACGAATACGAAGTTCTCTCAGACTCCGACATCTCAGATGCCTCCGATTCCAGCGATGAATACACGGCCGACCAAGAAGAGCTAGAGCTAGAGCGAGAAGAAAGCGACGACGTCTTGGGGAACAATCGAAAATCCATGGACCCTCCTCGGCCCTCCGGCGAGGATCAGAAATCGAAAAATGTCGACGCTCTAGTCAGAGGTAACCTTGTCGTGAAAAGACAGTCACTGCTTCCACGAGTTCTCTCAGTGACAGAAGGAGCAACAGTTTGTAGGAAACCCTTTAAACCACCATGCTCTAATGGCTATGATGACGGAAATGACCAGCTTGCTCGTCGTCTCTATGCACGTAAACGATTTGTTCCCTGGGGCTCATCAAGTACAGCATTCGTTCCAAACATTGATAGGCTTTTGAGTATACCAAACGAGGCTGAGAAAGATATAGTGGAAGAGAGTGTGACTCTACCACCCGGAATTGATCCTTTGGTCTTGTGGCAACCTGAAGAATTCGAGGATGGGACTGCTAATATGATGCAGATAGTAGTGGACCCAGTGCTTGTTCGTTTCCTTCGACCACATCAAAGAGAAGGCGTTCAGTTTATGTTTGAATGTGTTTCAGGGTTAAATAGTGCTGCAAACATATATGGATGCATTCTGGCAGACGATATGGGTTTGGGAAAGACATTGCAGTCAATCACATTACTATATACTCTTCTTTGTCAAGGGTTTGATGGGAAACCAATGGTTAAAAAAGCAATTATAGTCACCCCTACCAGTCTTGTGAGCAATTGGGAGGCTGAAATAAAGAAGTGGGTTGGAGAAAGAGTTCATCTCATTGCTCTCTGTGAAAGTACCCGAGATGATGTTGTTTCTGGAATTGATCGGTTCACAGGTCCTCGCAGCCCTATACAGGTACTAATTATTTCATACGAGACATTCCGGATGCATTCAACAAAGTTTAGCCAAAGTGAATCCTGTGACCTTCTCATATGTGACGAGGCTCACAGGCTGAAGAATGACCAGACAATGACGAATCAGGCATTGGCTGCTCTTGCATGCAAAAGGCGCATTTTGTTGTCAGGAACTCCAATGCAGAATGACCTAGAAGAGTTCTTTGCCATGGTCAACTTTACTAATCCCGGCATCTTAGGGGAAGCTGCACATTTTCGTCGCTACTATGAGGCACCTATTATTTGTGGAAGAGAACCTAATGCCTCTGAAGAAGAGAAGAAGCTAGGTGGTGAGCGCTCTGCTGAACTAAGTGGAAAAGTTAATCAGTTTATATTGCGGAGGACTAACGCACTATTATCAAATCATCTGCCACCAAAGATAATTGAAGTTGTTTGTTGCAAGTTGACTCCTCTCCAACTAGACCTATATAACCATTTTATACATTCCAAAAATGTTAAAAGAGCAATCTCTGAAGAGACGAAGAAATCAAAGATTTTGGCTTATATAACAGCTCTTAAGAAGCTATGCAACCATCCAAAGCTCATCTATGATACCATAAAAAGTGGAAGTCCAGGAACTTCAGGTTTTGAGGACTGTATTCGCTTTTTCCCACCAGAGATGTTCTCTGGAAGATCTGGATCATGGACTGGCGGGGATGGGGCTTGGGTTGAACTATCTGGAAAAATGCACGTTTTAGCTCGATTACTGGCCCATCTACGTAAGAGGACTGATGACCGTATTGTCCTTGTCTCAAATTATACGCAGACGCTGGACCTTTTTGCGCAACTGTGTAGAGAAAGACGATACCCATATTTGAGGCTTGATGGAACCACATCTATCAGTAAAAGACAGAAATTAGTGAACCAGTTCAATGACCCATCAAAGGATGAATTTGTATTTCTCTTAAGCAGCAAGGCTGGTGGTTGCGGTCTCAATTTGATAGGTGGAAATCGACTAGTACTGTTTGATCCTGATTGGAATCCTGCCAATGATAAACAAGCTGCTGCAAGAGTTTGGAGGGATGGGCAAAAAAAGAGAGTATACATTTACAGATTTTTAAGTACTGGAACAATTGAAGAAAAGGTGTACCAGCGTCAAATGTCAAAGGAAGGGCTTCAAAAAGTTATTCAGCAGGAACAAACAGATAGCTCAATGGCACAGGGAAACCTTCTTTCAACAGAAGACCTACGCGATCTTTTCACATTTCATGAGAATGTGAGGTCTGAAGTGCATGAGAAGATGAACTGCATTCGTTGCCAAAATAGCAATGATACCAATCGAAGCATCGCAGAGGGAGATGCAAACCAACCAACTAACGAAAGTGGTCAGTCTGGCCACGAAATCTCTGACATAGGTGGATTTGCAGAAATGTCTGGATGCTTACATGAGTTAAAGAGCTCGGAGAAGCAGGTAGGGACACCTCTAGAAGAGGATTTAAGTAATTGGGGGCATCATTTCTTCCCAAATTCAGTACCCGATGCTATTCTCCAAGCTTCAGCTGGAGCAGAGGTCACATTTGTTTTTACAAACCAAGTGGATGGGAAGCTTGTACCTGTTGAATCAAAGGTAAACCCAAAGATGCAGGGAGAAGAAGGAAAAGAGAATCATCCCAAATTAAGACAAGACCTGAATCAGAAACCCTTGCTATTGTCTTGGCAAAGAAAACCGCTAGAATCTGTTTCTTCGAGTGAAAATTCTACCAGAAGCACAATGTCTGCCCCTTTCAAGCCCTCAGAAAAGACCACTGTGGAATCAGTGAAAACTTCTTTAAAGGGTTCAGTGCATGTAGCATTAAAGCCTAAGCTCTCTCTTAAAATTCGATTGCCCCTGAAAAGATCGTCTCCTGATACCGACAATCACGATGATGATTTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000280 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006311 GO:0006325 GO:0006338 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015616 GO:0016043 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0030491 GO:0030702 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0033170 GO:0033554 GO:0034641 GO:0035822 GO:0035825 GO:0035861 GO:0040029 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045003 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048285 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051321 GO:0051701 GO:0051704 GO:0051716 GO:0060255 GO:0061806 GO:0061982 GO:0065007 GO:0070887 GO:0071214 GO:0071241 GO:0071248 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0104004 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1902679 GO:1903046 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

944

Amino Acids

105.7

Weight (kDa)

6.01

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 197, 691, 1694
AatII GACGTC 1 cut(s) 120
Acc16I TGCGCA 1 cut(s) 1737
Acc36I ACCTGC 1 cut(s) 2353
AccB1I GGYRCC 1 cut(s) 1186
AccI GTMKAC 3 cut(s) 189, 421, 1995
AccII CGCG 1 cut(s) 2145
AccIII TCCGGA 1 cut(s) 942
AciI CCGC 4 cut(s) 1291, 1605, 1881, 2621
AclWI GGATC 4 cut(s) 177, 476, 1600, 1916
AcoI YGGCCR 2 cut(s) 72, 2287
AcsI RAATTY 5 cut(s) 509, 1844, 2419, 2647, 2769
AcuI CTGAAG 7 cut(s) 525, 1034, 1242, 1446, 1518, 2199, 2433
AcyI GRCGYC 1 cut(s) 117
AfaI GTAC 8 cut(s) 385, 856, 918, 1914, 2017, 2042, 2427, 2505
AfeI AGCGCT 1 cut(s) 1250
AfiI CCNNNNNNNGG 2 cut(s) 913, 1837
AflII CTTAAG 2 cut(s) 1469, 1858
AhlI ACTAGT 1 cut(s) 1909
AjnI CCWGG 2 cut(s) 368, 1525
AjuI GAANNNNNNNTTGG 2 cut(s) 1028, 1060
AloI GAACNNNNNNTCC 2 cut(s) 813, 845
Alw21I GWGCWC 1 cut(s) 2354
Alw26I GTCTC 6 cut(s) 347, 929, 1424, 1708, 1889, 2799
AlwI GGATC 4 cut(s) 177, 476, 1600, 1916
AlwNI CAGNNNCTG 2 cut(s) 232, 1723
Ama87I CYCGRG 1 cut(s) 858
Aor13HI TCCGGA 1 cut(s) 942
Aor51HI AGCGCT 1 cut(s) 1250
AoxI GGCC 4 cut(s) 72, 155, 1662, 2287
ApeKI GCWGC 7 cut(s) 635, 903, 1049, 1160, 1863, 1955, 1958
ApoI RAATTY 5 cut(s) 509, 1844, 2419, 2647, 2769
Asp700I GAANNNNTTC 4 cut(s) 594, 828, 1820, 2067
AspLEI GCGC 3 cut(s) 1071, 1251, 1738
AspS9I GGNCC 6 cut(s) 145, 156, 550, 896, 1663, 1726
AsuC2I CCSGG 2 cut(s) 474, 1143
AsuHPI GGTGA 2 cut(s) 760, 1256
AvaI CYCGRG 1 cut(s) 858
AvaII GGWCC 4 cut(s) 145, 550, 896, 1726
BalI TGGCCA 1 cut(s) 2289
BanI GGYRCC 1 cut(s) 1186
BanII GRGCYC 2 cut(s) 377, 2354
BauI CACGAG 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 2142
Bbv12I GWGCWC 1 cut(s) 2354
BbvI GCAGC 7 cut(s) 622, 915, 1036, 1147, 1875, 1942, 1945
BccI CCATC 9 cut(s) 512, 728, 1494, 1604, 1674, 1772, 1840, 1970, 2486
BceAI ACGGC 1 cut(s) 87
BciT130I CCWGG 2 cut(s) 370, 1527
BcnI CCSGG 2 cut(s) 474, 1143
BcoDI GTCTC 6 cut(s) 347, 929, 1424, 1708, 1889, 2799
BcuI ACTAGT 1 cut(s) 1909
BfaI CTAG 9 cut(s) 89, 95, 197, 1106, 1238, 1373, 1910, 2378, 2624
BfoI RGCGCY 1 cut(s) 1252
BfrI CTTAAG 2 cut(s) 1469, 1858
BfuAI ACCTGC 1 cut(s) 2353
BglII AGATCT 1 cut(s) 1586
BisI GCNGC 7 cut(s) 636, 904, 1050, 1161, 1864, 1956, 1959
BlsI GCNGC 7 cut(s) 637, 905, 1051, 1162, 1865, 1957, 1960
BmcAI AGTACT 2 cut(s) 1914, 2017
Bme1390I CCNGG 4 cut(s) 370, 474, 1143, 1527
Bme18I GGWCC 4 cut(s) 145, 550, 896, 1726
BmeT110I CYCGRG 1 cut(s) 858
BmgT120I GGNCC 6 cut(s) 145, 156, 550, 896, 1663, 1726
BmiI GGNNCC 4 cut(s) 147, 552, 1188, 1783
BmrFI CCNGG 4 cut(s) 370, 474, 1143, 1527
BmrI ACTGGG 1 cut(s) 548
BmuI ACTGGG 1 cut(s) 548
BpiI GAAGAC 1 cut(s) 2142
BplI GAGNNNNNCTC 6 cut(s) 448, 480, 819, 851, 1562, 1594
BpmI CTGGAG 1 cut(s) 2475
Bpu10I CCTNAGC 1 cut(s) 2754
BpuMI CCSGG 2 cut(s) 474, 1143
BsaAI YACGTR 2 cut(s) 353, 1673
BsaBI GATNNNNATC 3 cut(s) 1591, 1932, 2229
BsaHI GRCGYC 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 1889
BsaJI CCNNGG 5 cut(s) 141, 152, 368, 369, 1122
BsaWI WCCGGW 1 cut(s) 942
BsaXI ACNNNNNCTCC 6 cut(s) 255, 285, 813, 843, 2448, 2478
Bsc4I CCNNNNNNNGG 2 cut(s) 913, 1837
Bse1I ACTGG 6 cut(s) 554, 777, 1606, 1665, 1819, 2023
Bse3DI GCAATG 3 cut(s) 686, 837, 2227
Bse8I GATNNNNATC 3 cut(s) 1591, 1932, 2229
BseAI TCCGGA 1 cut(s) 942
BseBI CCWGG 2 cut(s) 370, 1527
BseDI CCNNGG 5 cut(s) 141, 152, 368, 369, 1122
BseJI GATNNNNATC 3 cut(s) 1591, 1932, 2229
BseLI CCNNNNNNNGG 2 cut(s) 913, 1837
BseMI GCAATG 3 cut(s) 686, 837, 2227
BseMII CTCAG 5 cut(s) 39, 54, 264, 426, 2700
BseNI ACTGG 6 cut(s) 554, 777, 1606, 1665, 1819, 2023
BseRI GAGGAG 2 cut(s) 141, 1353
BseX3I CGGCCG 1 cut(s) 72
BseXI GCAGC 7 cut(s) 622, 915, 1036, 1147, 1875, 1942, 1945
BsgI GTGCAG 1 cut(s) 1146
Bsh1236I CGCG 1 cut(s) 2145
Bsh1285I CGRYCG 1 cut(s) 75
BshFI GGCC 4 cut(s) 74, 157, 1664, 2289
BshNI GGYRCC 1 cut(s) 1186
BsiEI CGRYCG 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 2354
BsiHKCI CYCGRG 1 cut(s) 858
BsiSI CCGG 4 cut(s) 162, 474, 943, 1143
BslFI GGGAC 2 cut(s) 535, 2383
BslI CCNNNNNNNGG 2 cut(s) 913, 1837
BsmAI GTCTC 6 cut(s) 347, 929, 1424, 1708, 1889, 2799
BsmBI CGTCTC 3 cut(s) 347, 1424, 2799
BsmFI GGGAC 2 cut(s) 535, 2383
BsmI GAATGC 4 cut(s) 389, 654, 949, 2202
BsnI GGCC 4 cut(s) 74, 157, 1664, 2289
Bso31I GGTCTC 1 cut(s) 1889
BsoBI CYCGRG 1 cut(s) 858
Bsp1286I GDGCHC 2 cut(s) 377, 2354
Bsp13I TCCGGA 1 cut(s) 942
Bsp143I GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
Bsp19I CCATGG 2 cut(s) 141, 1122
BspACI CCGC 4 cut(s) 1291, 1605, 1881, 2621
BspANI GGCC 4 cut(s) 74, 157, 1664, 2289
BspCNI CTCAG 5 cut(s) 38, 53, 263, 427, 2699
BspEI TCCGGA 1 cut(s) 942
BspFNI CGCG 1 cut(s) 2145
BspHI TCATGA 1 cut(s) 2161
BspLI GGNNCC 4 cut(s) 147, 552, 1188, 1783
BspMI ACCTGC 1 cut(s) 2353
BspPI GGATC 4 cut(s) 177, 476, 1600, 1916
BspQI GCTCTTC 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 1186
BspTI CTTAAG 2 cut(s) 1469, 1858
BspTNI GGTCTC 1 cut(s) 1889
BsrDI GCAATG 3 cut(s) 686, 837, 2227
BsrI ACTGG 6 cut(s) 554, 777, 1606, 1665, 1819, 2023
BssECI CCNNGG 5 cut(s) 141, 152, 368, 369, 1122
BssMI GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
BssNAI GTATAC 2 cut(s) 422, 1996
BssNI GRCGYC 1 cut(s) 117
BssSI CACGAG 1 cut(s) 240
BssT1I CCWWGG 2 cut(s) 141, 1122
Bst1107I GTATAC 2 cut(s) 422, 1996
Bst2BI CACGAG 1 cut(s) 240
Bst2UI CCWGG 2 cut(s) 370, 1527
Bst4CI ACNGT 7 cut(s) 228, 271, 1550, 1691, 1743, 1917, 2701
Bst6I CTCTTC 8 cut(s) 78, 447, 720, 1104, 1198, 1221, 1422, 2376
BstACI GRCGYC 1 cut(s) 117
BstAFI CTTAAG 2 cut(s) 1469, 1858
BstAPI GCANNNNNTGC 2 cut(s) 1049, 2208
BstBAI YACGTR 2 cut(s) 353, 1673
BstC8I GCNNGC 2 cut(s) 333, 1060
BstDEI CTNAG 8 cut(s) 25, 40, 250, 435, 1150, 1262, 2686, 2754
BstDSI CCRYGG 2 cut(s) 141, 1122
BstEII GGTNACC 1 cut(s) 206
BstFNI CGCG 1 cut(s) 2145
BstH2I RGCGCY 1 cut(s) 1252
BstHHI GCGC 3 cut(s) 1071, 1251, 1738
BstKTI GATC 8 cut(s) 172, 484, 886, 1589, 1595, 1924, 2149, 2792
BstMAI GTCTC 6 cut(s) 347, 929, 1424, 1708, 1889, 2799
BstMBI GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
BstMCI CGRYCG 1 cut(s) 75
BstMWI GCNNNNNNNGC 6 cut(s) 306, 1049, 1055, 1068, 2208, 2217
BstNI CCWGG 2 cut(s) 370, 1527
BstNSI RCATGY 2 cut(s) 1062, 2741
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 4 cut(s) 368, 472, 1141, 1525
BstSNI TACGTA 1 cut(s) 1673
BstUI CGCG 1 cut(s) 2145
BstV1I GCAGC 7 cut(s) 622, 915, 1036, 1147, 1875, 1942, 1945
BstV2I GAAGAC 1 cut(s) 2142
BstX2I RGATCY 1 cut(s) 1586
BstXI CCANNNNNNTGG 1 cut(s) 2492
BstYI RGATCY 1 cut(s) 1586
BstZ17I GTATAC 2 cut(s) 422, 1996
BstZI CGGCCG 1 cut(s) 72
BsuRI GGCC 4 cut(s) 74, 157, 1664, 2289
BtgI CCRYGG 2 cut(s) 141, 1122
BtgZI GCGATG 2 cut(s) 75, 2224
BtsI GCAGTG 1 cut(s) 230
BtsIMutI CAGTG 6 cut(s) 230, 258, 561, 2697, 2715, 2739
BveI ACCTGC 1 cut(s) 2353
Cac8I GCNNGC 2 cut(s) 333, 1060
CaiI CAGNNNCTG 2 cut(s) 232, 1723
CciI TCATGA 1 cut(s) 2161
CfoI GCGC 3 cut(s) 1071, 1251, 1738
Cfr13I GGNCC 6 cut(s) 145, 156, 550, 896, 1663, 1726
CseI GACGC 3 cut(s) 200, 1729, 2036
Csp6I GTAC 8 cut(s) 384, 855, 917, 1913, 2016, 2041, 2426, 2504
CspCI CAANNNNNGTGG 4 cut(s) 1855, 1890, 2469, 2504
CviAII CATG 9 cut(s) 142, 297, 1059, 1123, 1596, 2162, 2186, 2339, 2738
CviQI GTAC 8 cut(s) 384, 855, 917, 1913, 2016, 2041, 2426, 2504
DdeI CTNAG 8 cut(s) 25, 40, 250, 435, 1150, 1262, 2686, 2754
DpnI GATC 8 cut(s) 171, 483, 885, 1588, 1594, 1923, 2148, 2791
DpnII GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
DraI TTTAAA 2 cut(s) 289, 2724
DrdI GACNNNNNNGTC 3 cut(s) 197, 691, 1694
DseDI GACNNNNNNGTC 3 cut(s) 197, 691, 1694
EaeI YGGCCR 2 cut(s) 72, 2287
EagI CGGCCG 1 cut(s) 72
Eam1104I CTCTTC 8 cut(s) 78, 447, 720, 1104, 1198, 1221, 1422, 2376
EarI CTCTTC 8 cut(s) 78, 447, 720, 1104, 1198, 1221, 1422, 2376
Ecl136II GAGCTC 1 cut(s) 2352
EclXI CGGCCG 1 cut(s) 72
Eco105I TACGTA 1 cut(s) 1673
Eco130I CCWWGG 2 cut(s) 141, 1122
Eco24I GRGCYC 2 cut(s) 377, 2354
Eco31I GGTCTC 1 cut(s) 1889
Eco47I GGWCC 4 cut(s) 145, 550, 896, 1726
Eco47III AGCGCT 1 cut(s) 1250
Eco52I CGGCCG 1 cut(s) 72
Eco53kI GAGCTC 1 cut(s) 2352
Eco57I CTGAAG 7 cut(s) 525, 1034, 1242, 1446, 1518, 2199, 2433
Eco88I CYCGRG 1 cut(s) 858
Eco91I GGTNACC 1 cut(s) 206
EcoICRI GAGCTC 1 cut(s) 2352
EcoO109I RGGNCCY 1 cut(s) 896
EcoO65I GGTNACC 1 cut(s) 206
EcoRI GAATTC 1 cut(s) 509
EcoRII CCWGG 2 cut(s) 368, 1525
EcoT14I CCWWGG 2 cut(s) 141, 1122
EcoT22I ATGCAT 2 cut(s) 656, 951
EcoT38I GRGCYC 2 cut(s) 377, 2354
ErhI CCWWGG 2 cut(s) 141, 1122
Esp3I CGTCTC 3 cut(s) 347, 1424, 2799
FaeI CATG 9 cut(s) 145, 300, 1062, 1126, 1599, 2165, 2189, 2342, 2741
FaqI GGGAC 2 cut(s) 535, 2383
FatI CATG 9 cut(s) 141, 296, 1058, 1122, 1595, 2161, 2185, 2338, 2737
FauI CCCGC 1 cut(s) 1598
FauNDI CATATG 1 cut(s) 992
FblI GTMKAC 3 cut(s) 189, 421, 1995
Fnu4HI GCNGC 7 cut(s) 636, 904, 1050, 1161, 1864, 1956, 1959
FriOI GRGCYC 2 cut(s) 377, 2354
Fsp4HI GCNGC 7 cut(s) 636, 904, 1050, 1161, 1864, 1956, 1959
FspBI CTAG 9 cut(s) 89, 95, 197, 1106, 1238, 1373, 1910, 2378, 2624
FspI TGCGCA 1 cut(s) 1737
GlaI GCGC 3 cut(s) 1070, 1250, 1737
GluI GCNGC 7 cut(s) 636, 904, 1050, 1161, 1864, 1956, 1959
GsuI CTGGAG 1 cut(s) 2475
HaeII RGCGCY 1 cut(s) 1252
HaeIII GGCC 4 cut(s) 74, 157, 1664, 2289
HapII CCGG 4 cut(s) 162, 474, 943, 1143
HgaI GACGC 3 cut(s) 200, 1729, 2036
HhaI GCGC 3 cut(s) 1071, 1251, 1738
Hin1I GRCGYC 1 cut(s) 117
Hin1II CATG 9 cut(s) 145, 300, 1062, 1126, 1599, 2165, 2189, 2342, 2741
Hin6I GCGC 3 cut(s) 1069, 1249, 1736
HinP1I GCGC 3 cut(s) 1069, 1249, 1736
HincII GTYRAC 3 cut(s) 190, 1129, 1359
HindII GTYRAC 3 cut(s) 190, 1129, 1359
HindIII AAGCTT 2 cut(s) 2445, 2498
HpaII CCGG 4 cut(s) 162, 474, 943, 1143
HphI GGTGA 2 cut(s) 760, 1256
Hpy99I CGWCG 5 cut(s) 116, 119, 194, 342, 1176
HpyAV CCTTC 7 cut(s) 254, 581, 584, 995, 2057, 2132, 2540
HpyCH4III ACNGT 7 cut(s) 228, 271, 1550, 1691, 1743, 1917, 2701
HpyCH4IV ACGT 4 cut(s) 117, 352, 1644, 1672
HpyF10VI GCNNNNNNNGC 6 cut(s) 306, 1049, 1055, 1068, 2208, 2217
HpyF3I CTNAG 8 cut(s) 25, 40, 250, 435, 1150, 1262, 2686, 2754
HpySE526I ACGT 4 cut(s) 117, 352, 1644, 1672
Hsp92I GRCGYC 1 cut(s) 117
Hsp92II CATG 9 cut(s) 145, 300, 1062, 1126, 1599, 2165, 2189, 2342, 2741
HspAI GCGC 3 cut(s) 1069, 1249, 1736
Kpn2I TCCGGA 1 cut(s) 942
Kzo9I GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
LguI GCTCTTC 1 cut(s) 78
LmnI GCTCC 2 cut(s) 263, 2456
Lsp1109I GCAGC 7 cut(s) 622, 915, 1036, 1147, 1875, 1942, 1945
MaeI CTAG 9 cut(s) 89, 95, 197, 1106, 1238, 1373, 1910, 2378, 2624
MaeII ACGT 4 cut(s) 117, 352, 1644, 1672
MaeIII GTNAC 8 cut(s) 206, 228, 253, 460, 766, 980, 995, 2464
MalI GATC 8 cut(s) 171, 483, 885, 1588, 1594, 1923, 2148, 2791
MboI GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
MfeI CAATTG 2 cut(s) 790, 2025
MflI RGATCY 1 cut(s) 1586
MhlI GDGCHC 2 cut(s) 377, 2354
MlsI TGGCCA 1 cut(s) 2289
MluNI TGGCCA 1 cut(s) 2289
MlyI GAGTC 3 cut(s) 23, 457, 1354
MmeI TCCRAC 3 cut(s) 57, 799, 1393
Mox20I TGGCCA 1 cut(s) 2289
Mph1103I ATGCAT 2 cut(s) 656, 951
MroI TCCGGA 1 cut(s) 942
MroXI GAANNNNTTC 4 cut(s) 594, 828, 1820, 2067
MscI TGGCCA 1 cut(s) 2289
MslI CAYNNNNRTG 2 cut(s) 2166, 2817
Msp20I TGGCCA 1 cut(s) 2289
MspA1I CMGCKG 1 cut(s) 2453
MspCI CTTAAG 2 cut(s) 1469, 1858
MspI CCGG 4 cut(s) 162, 474, 943, 1143
MspR9I CCNGG 4 cut(s) 370, 474, 1143, 1527
MunI CAATTG 2 cut(s) 790, 2025
Mva1269I GAATGC 4 cut(s) 389, 654, 949, 2202
MvaI CCWGG 2 cut(s) 370, 1527
MvnI CGCG 1 cut(s) 2145
MwoI GCNNNNNNNGC 6 cut(s) 306, 1049, 1055, 1068, 2208, 2217
NciI CCSGG 2 cut(s) 474, 1143
NcoI CCATGG 2 cut(s) 141, 1122
NdeI CATATG 1 cut(s) 992
NdeII GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
NlaIII CATG 9 cut(s) 145, 300, 1062, 1126, 1599, 2165, 2189, 2342, 2741
NlaIV GGNNCC 4 cut(s) 147, 552, 1188, 1783
NmeAIII GCCGAG 1 cut(s) 133
NmuCI GTSAC 7 cut(s) 228, 253, 460, 766, 980, 995, 2464
NsbI TGCGCA 1 cut(s) 1737
NsiI ATGCAT 2 cut(s) 656, 951
NspI RCATGY 2 cut(s) 1062, 2741
PaeI GCATGC 1 cut(s) 1062
PagI TCATGA 1 cut(s) 2161
PasI CCCWGGG 1 cut(s) 369
PciSI GCTCTTC 1 cut(s) 78
PcsI WCGNNNNNNNCGW 1 cut(s) 571
PctI GAATGC 4 cut(s) 389, 654, 949, 2202
PdmI GAANNNNTTC 4 cut(s) 594, 828, 1820, 2067
PfeI GAWTC 9 cut(s) 53, 974, 1036, 1933, 2513, 2557, 2584, 2627, 2705
PflFI GACNNNGTC 1 cut(s) 116
PfoI TCCNGGA 1 cut(s) 1525
PkrI GCNGC 7 cut(s) 637, 905, 1051, 1162, 1865, 1957, 1960
PleI GAGTC 3 cut(s) 23, 457, 1354
PpsI GAGTC 3 cut(s) 23, 457, 1354
Ppu21I YACGTR 2 cut(s) 353, 1673
PpuMI RGGWCCY 1 cut(s) 896
Psp124BI GAGCTC 1 cut(s) 2354
Psp5II RGGWCCY 1 cut(s) 896
Psp6I CCWGG 2 cut(s) 368, 1525
PspEI GGTNACC 1 cut(s) 206
PspGI CCWGG 2 cut(s) 368, 1525
PspN4I GGNNCC 4 cut(s) 147, 552, 1188, 1783
PspPI GGNCC 6 cut(s) 145, 156, 550, 896, 1663, 1726
PspPPI RGGWCCY 1 cut(s) 896
PstNI CAGNNNCTG 2 cut(s) 232, 1723
PsuI RGATCY 1 cut(s) 1586
PsyI GACNNNGTC 1 cut(s) 116
PvuII CAGCTG 1 cut(s) 2453
RsaI GTAC 8 cut(s) 385, 856, 918, 1914, 2017, 2042, 2427, 2505
RsaNI GTAC 8 cut(s) 384, 855, 917, 1913, 2016, 2041, 2426, 2504
RseI CAYNNNNRTG 2 cut(s) 2166, 2817
SacI GAGCTC 1 cut(s) 2354
SalI GTCGAC 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 78
SatI GCNGC 7 cut(s) 636, 904, 1050, 1161, 1864, 1956, 1959
Sau3AI GATC 8 cut(s) 169, 481, 883, 1586, 1592, 1921, 2146, 2789
Sau96I GGNCC 6 cut(s) 145, 156, 550, 896, 1663, 1726
ScaI AGTACT 2 cut(s) 1914, 2017
SchI GAGTC 3 cut(s) 23, 457, 1354
ScrFI CCNGG 4 cut(s) 370, 474, 1143, 1527
SduI GDGCHC 2 cut(s) 377, 2354
SinI GGWCC 4 cut(s) 145, 550, 896, 1726
SmiMI CAYNNNNRTG 2 cut(s) 2166, 2817
SmlI CTYRAG 2 cut(s) 1469, 1858
SmoI CTYRAG 2 cut(s) 1469, 1858
SnaBI TACGTA 1 cut(s) 1673
SpeI ACTAGT 1 cut(s) 1909
SphI GCATGC 1 cut(s) 1062
SsiI CCGC 4 cut(s) 1291, 1605, 1881, 2621
SspMI CTAG 9 cut(s) 89, 95, 197, 1106, 1238, 1373, 1910, 2378, 2624
SstI GAGCTC 1 cut(s) 2354
StyD4I CCNGG 4 cut(s) 368, 472, 1141, 1525
StyI CCWWGG 2 cut(s) 141, 1122
TaaI ACNGT 7 cut(s) 228, 271, 1550, 1691, 1743, 1917, 2701
TaiI ACGT 4 cut(s) 120, 355, 1647, 1675
TatI WGTACW 3 cut(s) 383, 1912, 2015
TfiI GAWTC 9 cut(s) 53, 974, 1036, 1933, 2513, 2557, 2584, 2627, 2705
TscAI CASTG 6 cut(s) 237, 258, 561, 2704, 2715, 2739
TseFI GTSAC 7 cut(s) 228, 253, 460, 766, 980, 995, 2464
TseI GCWGC 7 cut(s) 635, 903, 1049, 1160, 1863, 1955, 1958
Tsp45I GTSAC 7 cut(s) 228, 253, 460, 766, 980, 995, 2464
TspDTI ATGAA 6 cut(s) 78, 821, 918, 1857, 2150, 2210
TspGWI ACGGA 1 cut(s) 333
TspRI CASTG 6 cut(s) 237, 258, 561, 2704, 2715, 2739
Tth111I GACNNNGTC 1 cut(s) 116
Vha464I CTTAAG 2 cut(s) 1469, 1858
VpaK11BI GGWCC 4 cut(s) 145, 550, 896, 1726
XapI RAATTY 5 cut(s) 509, 1844, 2419, 2647, 2769
XbaI TCTAGA 1 cut(s) 2377
XceI RCATGY 2 cut(s) 1062, 2741
XcmI CCANNNNNNNNNTGG 1 cut(s) 2450
XmiI GTMKAC 3 cut(s) 189, 421, 1995
XmnI GAANNNNTTC 4 cut(s) 594, 828, 1820, 2067
XspI CTAG 9 cut(s) 89, 95, 197, 1106, 1238, 1373, 1910, 2378, 2624
ZraI GACGTC 1 cut(s) 118
ZrmI AGTACT 2 cut(s) 1914, 2017
Zsp2I ATGCAT 2 cut(s) 656, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.