Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008228

Physical Location & Seq

Genomic Coordinates Forward (+)

7425476 .. 7432365

Gene Structure 6890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G21180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3261 bp

ATGAGCACTTCGTCGAGCAACGGATTGCTTCTGACGTCAATGTCAGGACGTCATGACGACATGGAAGCTGGTTCTGCTAAAACTGAAGAACATTCTGATCATGAAGAGCTTCAACATGATCCTGATGATCCTTTTGATATTGATAACACCAAGAACGCTTCTGTTGAATCTCTTCGTCGTTGGAGACAAGCCGCTCTTGTGTTGAACGCATCGCGTCGGTTTCGATACACTTTGGATCTTAATAAAGAAGAACATTATGATAATCGAAGGAGGATGATCAGAGCTCATGCTCAAGTCATTAGGGCAGCATTGCTTTTTAAACTGGCTGGTGAACAACAAATTGCGTTTGGATCATCAACACCAGCAGCTTCTACTGGTAACTTTGACATTGATCTTGAAAAGCTTGTGTCTATGACAAGGAACCAGAACATGTCCAATTTGCAGCAATATGGAGGGGTCAAAGGTGTTGCAGAGAAGTTGAAGTCAAATATGGAACAAGGAATCAATGAGGATGAGAAAGAGGTGATAGATAGGAAGAATGCTTTTGGATCTAACACTTACCCAAAAAAGAAGGGGAAAAACTTTTTTATGTTCCTCTGGGAAGCTTGGCAAGATTTAACTCTCATCATCTTGATCATAGCGGCTGTAACATCATTGGCATTGGGAATAAAGACAGAGGGTTTGAAAGAAGGTTGGCTTGATGGTGGAAGCATTGCCTTTGCGGTTTTGCTTGTCATTGTTGTTACAGCTGTTAGTGACTATCGCCAATCTCTCCAGTTTCAAAACCTCAACGATGAAAAAAGAAATATACAACTAGAGGTCATGAGAGGAGGGAGAACAGTGAAGATATCAATCTATGACGTTGTTGTCGGAGATGTTATACCTCTTAGGATAGGTGACCAGGTCCCTGCGGATGGAGTGCTAATTAGTGGTCATTCTCTTGCTATTGATGAATCTAGCATGACCGGTGAAAGCAAGATTGTTCACAAGGATCAAAAATCCCCTTTTCTAATGTCTGGCTGTAAAGTAGCTGACGGAGTCGGTAACATGCTGGTTACTGGTGTTGGAATCAACACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAAGATACTGGTGAAGAAACTCCATTGCAGGTGAGGTTAAATGGTCTTGCAACCTTCATAGGGATAGTGGGGCTCTCAGTGGCTCTTGTTGTCCTGGTGGCTCTTCTTGTGAGATATTTTACCGGAACTACTCAAGATACTAATGGAGCGACCCAGTTTATCAAAGGGACGACTAGTATCAGTGACATTGTAGATGATTGTGTAAAGATATTTACAATCGCCGTGACAATTGTGGTTGTAGCAGTGCCTGAGGGACTTCCCCTAGCAGTTACCCTCACTTTGGCTTACTCAATGCGAAAGATGATGGCAGACAAAGCTTTGGTTAGAAGGCTTTCAGCTTGTGAAACCATGGGATCAGCAACAACAATCTGCAGTGACAAAACTGGAACTTTAACTTTGAATCAGATGACTGTGGTTGAAACTTATGCTGGAGGATCAAAGATGGATGTAGCAGACAACCCTTCCGGTCTCCACCCTAAACTTGTTGCCTTAATAAGTGAGGGTGTTGCACAAAACACAACAGGAAACATTTTTCATCCCAAGGATGGTGGAGAGGTGGAGATTTCTGGATCTCCCACAGAGAAGGCTATTCTGTCTTGGGCTTATAAGTTGGGGATGAAGTTTGATACCATCAGGTCGGAGTCTGCTATCATCCATGCCTTCCCTTTCAATTCAGAGAAAAAGCGTGGTGGTGTTGCTGTGCTTCGAGGTGATTCTGAAGTTTTCATTCACTGGAAGGGAGCAGCAGAGATAGTTTTGGCTTGCTGTACACAATACATGGACTCAAATGGTACTCTGCAGTCCATTGAGAGCCAAAAGGAATTTTTCAGAGTTGCTATCGATAGCATGGCGAAAAATAGCTTGCGATGTGTTGCTATTGCATGCAGAACACAAGAGCTGAACCAAGTTCCCAAGGAACAAGAGGACTTGGATAAATGGGCTTTACCTGAAGATGAACTCATTTTGCTTGCTATCGTTGGCATAAAGGATCCTTGTCGTCCCGGTGTCAGAGAAGCAGTGAGAATCTGTACCAGTGCTGGTGTTAAGGTACGAATGGTGACTGGTGACAATCTTCAAACAGCAAAAGCAATTGCTTTGGAGTGTGGTATACTTTCTTCAGATACAGAAGCTGTTGAGCCTACTATCATCGAAGGAAAAGTGTTCCGTGAGCTATCTGAGAAAGAGAGAGAACAAGTAGCCAAGAAAATAACGGTGATGGGTAGGTCATCTCCTAACGACAAGCTCTTACTTGTTCAAGCACTACGGAAAAATGGAGATGTTGTTGCAGTCACTGGTGATGGTACTAATGATGCTCCTGCCCTCCATGAGGCAGATATAGGTCTCTCTATGGGTATATCAGGAACTGAAGTTGCAAAAGAGAGTTCTGACATCATTATTTTGGATGACAATTTTGCTTCAGTAGTAAAGGTTGTTCGTTGGGGCCGTTCTGTGTATGCTAACATTCAGAAATTCATACAATTCCAGCTTACTGTGAATGTTGCCGCACTTATAATCAATGTTGTAGCAGCAATGTCTTCTGGTGACGTCCCTCTAAAGGCTGTACAGCTGCTTTGGGTCAACCTTATCATGGATACTCTTGGAGCACTTGCACTAGCTACAGAGCCACCAACCGATCATCTTATGCATAGAACCCCTGTTGGAAGAAGGGAACCTCTTATAACAAACATCATGTGGAGGAACTTGCTTGTTCAGTCATTCTATCAAGTGGCTGTTCTCCTAGTTCTCAACTTTGCAGGCTTAAGCATTCTTGGCTTGAACCATGAAAACCATGCACATGCTGTGGAAGTGAAGAACACTATGATATTCAATGCCTTTGTCATGTGTCAAATATTCAACGAGTTCAACGCAAGAAAACCTGATGAAATGAATGTATTCCGGGGAGTAAATAAGAACCCTCTCTTCGTAGCAATTGTTGGAGTCACTTTTATACTTCAGATCATCATCGTTACTTTCCTCGGAAAGTTTGCTCACACCGTTAGACTGGGATGGCAGTTATGGCTTGCTTCTATAATCATTGGATTGGTCAGCTGGCCACTAGCAATTGTTGGGAAACTGATCCCTGTACCCAAGACACCGATGAGCGTCTACTTCAAGAAACCGTTCCGTAAATACAAAGCTTCAAGAAATGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0007338 GO:0008150 GO:0008324 GO:0009555 GO:0009566 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0019953 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1086

Amino Acids

118.77

Weight (kDa)

6.31

Isoelectric Point (pI)

36.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	42 - 84	6.3e-18	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	150 - 218	5.8e-15	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	272 - 367	5.3e-20	P-type ATPase actuator domain
Hydrolase	PF00702	491 - 814	6.9e-17	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	530 - 703	4.1e-30	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	885 - 1062	1.9e-45	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0008228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21180
fragaria_vesca	FvH4_6g37190 FvH4_6g37190 FvH4_6g37190 FvH4_6g37190
malus_domestica	MD09G1160300.v1.1 MD17G1146100.v1.1
prunus_persica	Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1
pyrus_communis	pycom09g07890 pycom17g13890
rosa_chinensis	RchiOBHm_Chr2g0149841
rosa_laevigata	RLG00000020450
rosa_multiflora	Rmu_ssc0000308.1_g000029
rosa_roxburghii	Rroxscaffold_2G00097600
rosa_rugosa	Rorug02G0417000
rosa_samantha	Rh2BG487700 Rh2CG461600 Rh2DG496500
rosa_wichuraiana	Rw2G038820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1713, 2618, 2786
AarI	CACCTGC	1 cut(s)	1126
AasI	GACNNNNNNGTC	2 cut(s)	40, 866
AatII	GACGTC	3 cut(s)	38, 52, 2655
Acc36I	ACCTGC	1 cut(s)	1126
AccBSI	CCGCTC	1 cut(s)	194
AccI	GTMKAC	2 cut(s)	2215, 3213
AccII	CGCG	1 cut(s)	214
AciI	CCGC	5 cut(s)	192, 641, 722, 911, 2610
AcoI	YGGCCR	1 cut(s)	3158
AcsI	RAATTY	2 cut(s)	1928, 2576
AcuI	CTGAAG	7 cut(s)	105, 1845, 2076, 2208, 2493, 2508, 3044
AcyI	GRCGYC	3 cut(s)	35, 49, 2652
AdeI	CACNNNGTG	1 cut(s)	1080
AfaI	GTAC	7 cut(s)	1876, 1900, 2137, 2157, 2410, 2670, 3192
AfiI	CCNNNNNNNGG	7 cut(s)	914, 1167, 1387, 1652, 2434, 2662, 2695
AflII	CTTAAG	1 cut(s)	2866
AflIII	ACRYGT	1 cut(s)	429
AgeI	ACCGGT	1 cut(s)	965
AhlI	ACTAGT	1 cut(s)	1280
AjnI	CCWGG	2 cut(s)	900, 1200
Alw21I	GWGCWC	3 cut(s)	8, 286, 2713
Alw26I	GTCTC	3 cut(s)	178, 1580, 2453
AlwNI	CAGNNNCTG	4 cut(s)	1355, 2237, 2399, 2471
AoxI	GGCC	2 cut(s)	2548, 3158
ApeKI	GCWGC	6 cut(s)	305, 365, 442, 1850, 2633, 2674
ApoI	RAATTY	2 cut(s)	1928, 2576
ArsI	GACNNNNNNTTYG	2 cut(s)	664, 696
AsiGI	ACCGGT	1 cut(s)	965
Asp700I	GAANNNNTTC	5 cut(s)	108, 171, 1438, 2999, 3227
AspS9I	GGNCC	2 cut(s)	904, 2548
AsuC2I	CCSGG	2 cut(s)	2109, 3005
AvaII	GGWCC	1 cut(s)	904
AxyI	CCTNAGG	1 cut(s)	1356
BalI	TGGCCA	1 cut(s)	3160
BamHI	GGATCC	1 cut(s)	2095
BanII	GRGCYC	2 cut(s)	286, 1182
BarI	GAAGNNNNNNTAC	2 cut(s)	2206, 2238
BbsI	GAAGAC	1 cut(s)	2634
Bbv12I	GWGCWC	3 cut(s)	8, 286, 2713
BbvI	GCAGC	6 cut(s)	317, 377, 454, 1862, 2645, 2661
BceAI	ACGGC	2 cut(s)	1313, 2535
BciT130I	CCWGG	2 cut(s)	902, 1202
BciVI	GTATCC	1 cut(s)	2692
BclI	TGATCA	3 cut(s)	97, 276, 633
BcnI	CCSGG	2 cut(s)	2109, 3005
BcoDI	GTCTC	3 cut(s)	178, 1580, 2453
BcuI	ACTAGT	1 cut(s)	1280
BfaI	CTAG	7 cut(s)	815, 957, 1281, 1370, 2720, 2846, 3164
BfmI	CTRYAG	3 cut(s)	1477, 1904, 2724
BfrI	CTTAAG	1 cut(s)	2866
BfuAI	ACCTGC	1 cut(s)	1126
BfuI	GTATCC	1 cut(s)	2692
BisI	GCNGC	9 cut(s)	192, 306, 366, 443, 642, 1851, 2610, 2634, 2675
BlsI	GCNGC	9 cut(s)	193, 307, 367, 444, 643, 1852, 2611, 2635, 2676
Bme1390I	CCNGG	4 cut(s)	902, 1202, 2109, 3005
Bme18I	GGWCC	1 cut(s)	904
BmgT120I	GGNCC	2 cut(s)	904, 2548
BmiI	GGNNCC	5 cut(s)	422, 906, 2097, 2549, 2778
BmrFI	CCNGG	4 cut(s)	902, 1202, 2109, 3005
BmrI	ACTGGG	2 cut(s)	1255, 3119
BmsI	GCATC	2 cut(s)	218, 2407
BmuI	ACTGGG	2 cut(s)	1255, 3119
BpiI	GAAGAC	1 cut(s)	2634
BpmI	CTGGAG	2 cut(s)	758, 1557
BpuEI	CTTGAG	2 cut(s)	276, 1224
BpuMI	CCSGG	2 cut(s)	2109, 3005
Bsa29I	ATCGAT	1 cut(s)	1947
BsaBI	GATNNNNATC	2 cut(s)	851, 3068
BsaHI	GRCGYC	3 cut(s)	35, 49, 2652
BsaI	GGTCTC	2 cut(s)	1580, 2453
BsaJI	CCNNGG	5 cut(s)	1455, 1647, 2019, 3004, 3082
BsaWI	WCCGGW	3 cut(s)	965, 1229, 1571
BsaXI	ACNNNNNCTCC	2 cut(s)	2373, 2403
Bsc4I	CCNNNNNNNGG	7 cut(s)	914, 1167, 1387, 1652, 2434, 2662, 2695
Bse118I	RCCGGY	1 cut(s)	965
Bse21I	CCTNAGG	1 cut(s)	1356
Bse3DI	GCAATG	4 cut(s)	308, 711, 1130, 2643
Bse8I	GATNNNNATC	2 cut(s)	851, 3068
BseBI	CCWGG	2 cut(s)	902, 1202
BseCI	ATCGAT	1 cut(s)	1947
BseDI	CCNNGG	5 cut(s)	1455, 1647, 2019, 3004, 3082
BseJI	GATNNNNATC	2 cut(s)	851, 3068
BseLI	CCNNNNNNNGG	7 cut(s)	914, 1167, 1387, 1652, 2434, 2662, 2695
BseMI	GCAATG	4 cut(s)	308, 711, 1130, 2643
BseMII	CTCAG	5 cut(s)	1068, 1119, 1197, 1347, 2274
BseRI	GAGGAG	1 cut(s)	843
BseXI	GCAGC	6 cut(s)	317, 377, 454, 1862, 2645, 2661
Bsh1236I	CGCG	1 cut(s)	214
BshFI	GGCC	2 cut(s)	2550, 3160
BshTI	ACCGGT	1 cut(s)	965
BshVI	ATCGAT	1 cut(s)	1947
BsiHKAI	GWGCWC	3 cut(s)	8, 286, 2713
BsiSI	CCGG	5 cut(s)	966, 1230, 1572, 2109, 3004
BslFI	GGGAC	5 cut(s)	890, 1288, 1374, 2091, 2639
BslI	CCNNNNNNNGG	7 cut(s)	914, 1167, 1387, 1652, 2434, 2662, 2695
BsmAI	GTCTC	3 cut(s)	178, 1580, 2453
BsmFI	GGGAC	5 cut(s)	890, 1288, 1374, 2091, 2639
BsmI	GAATGC	2 cut(s)	544, 2871
BsnI	GGCC	2 cut(s)	2550, 3160
Bso31I	GGTCTC	2 cut(s)	1580, 2453
Bsp1286I	GDGCHC	4 cut(s)	8, 286, 1182, 2713
Bsp1407I	TGTACA	2 cut(s)	1874, 2668
Bsp19I	CCATGG	1 cut(s)	1455
BspACI	CCGC	5 cut(s)	192, 641, 722, 911, 2610
BspANI	GGCC	2 cut(s)	2550, 3160
BspCNI	CTCAG	5 cut(s)	1069, 1118, 1196, 1348, 2275
BspDI	ATCGAT	1 cut(s)	1947
BspFNI	CGCG	1 cut(s)	214
BspHI	TCATGA	3 cut(s)	52, 100, 822
BspLI	GGNNCC	5 cut(s)	422, 906, 2097, 2549, 2778
BspMAI	CTGCAG	2 cut(s)	1481, 1908
BspMI	ACCTGC	1 cut(s)	1126
BspQI	GCTCTTC	2 cut(s)	99, 1215
BspTI	CTTAAG	1 cut(s)	2866
BspTNI	GGTCTC	2 cut(s)	1580, 2453
BsrBI	CCGCTC	1 cut(s)	194
BsrDI	GCAATG	4 cut(s)	308, 711, 1130, 2643
BsrFI	RCCGGY	1 cut(s)	965
BsrGI	TGTACA	2 cut(s)	1874, 2668
BssAI	RCCGGY	1 cut(s)	965
BssECI	CCNNGG	5 cut(s)	1455, 1647, 2019, 3004, 3082
BssNAI	GTATAC	1 cut(s)	2216
BssNI	GRCGYC	3 cut(s)	35, 49, 2652
BssT1I	CCWWGG	3 cut(s)	1455, 1647, 2019
Bst1107I	GTATAC	1 cut(s)	2216
Bst2UI	CCWGG	2 cut(s)	902, 1202
Bst4CI	ACNGT	6 cut(s)	841, 1519, 2320, 2599, 3103, 3228
Bst6I	CTCTTC	4 cut(s)	99, 177, 1215, 3032
BstACI	GRCGYC	3 cut(s)	35, 49, 2652
BstAFI	CTTAAG	1 cut(s)	2866
BstAUI	TGTACA	2 cut(s)	1874, 2668
BstC8I	GCNNGC	7 cut(s)	1870, 1970, 1990, 2076, 2863, 3129, 3158
BstDEI	CTNAG	6 cut(s)	887, 1077, 1105, 1183, 1356, 2283
BstDSI	CCRYGG	1 cut(s)	1455
BstEII	GGTNACC	1 cut(s)	896
BstENI	CCTNNNNNAGG	1 cut(s)	2432
BstFNI	CGCG	1 cut(s)	214
BstMAI	GTCTC	3 cut(s)	178, 1580, 2453
BstMWI	GCNNNNNNNGC	4 cut(s)	74, 1421, 2877, 3124
BstNI	CCWGG	2 cut(s)	902, 1202
BstNSI	RCATGY	4 cut(s)	433, 1051, 1992, 2906
BstPI	GGTNACC	1 cut(s)	896
BstSCI	CCNGG	4 cut(s)	900, 1200, 2107, 3003
BstSFI	CTRYAG	3 cut(s)	1477, 1904, 2724
BstUI	CGCG	1 cut(s)	214
BstV1I	GCAGC	6 cut(s)	317, 377, 454, 1862, 2645, 2661
BstV2I	GAAGAC	1 cut(s)	2634
BstX2I	RGATCY	4 cut(s)	235, 548, 1676, 2095
BstYI	RGATCY	4 cut(s)	235, 548, 1676, 2095
BstZ17I	GTATAC	1 cut(s)	2216
Bsu15I	ATCGAT	1 cut(s)	1947
Bsu36I	CCTNAGG	1 cut(s)	1356
BsuI	GTATCC	1 cut(s)	2692
BsuRI	GGCC	2 cut(s)	2550, 3160
BsuTUI	ATCGAT	1 cut(s)	1947
BtgI	CCRYGG	1 cut(s)	1455
BtgZI	GCGATG	2 cut(s)	195, 1987
BtsI	GCAGTG	3 cut(s)	1356, 1486, 2130
BveI	ACCTGC	1 cut(s)	1126
Cac8I	GCNNGC	7 cut(s)	1870, 1970, 1990, 2076, 2863, 3129, 3158
CaiI	CAGNNNCTG	4 cut(s)	1355, 2237, 2399, 2471
CciI	TCATGA	3 cut(s)	52, 100, 822
Cfr10I	RCCGGY	1 cut(s)	965
Cfr13I	GGNCC	2 cut(s)	904, 2548
ClaI	ATCGAT	1 cut(s)	1947
CseI	GACGC	2 cut(s)	203, 3199
CsiI	ACCWGGT	1 cut(s)	900
Csp6I	GTAC	7 cut(s)	1875, 1899, 2136, 2156, 2409, 2669, 3191
CspAI	ACCGGT	1 cut(s)	965
CspCI	CAANNNNNGTGG	2 cut(s)	1636, 1671
CviQI	GTAC	7 cut(s)	1875, 1899, 2136, 2156, 2409, 2669, 3191
DdeI	CTNAG	6 cut(s)	887, 1077, 1105, 1183, 1356, 2283
DraI	TTTAAA	1 cut(s)	319
DraIII	CACNNNGTG	1 cut(s)	1080
DrdI	GACNNNNNNGTC	2 cut(s)	40, 866
DseDI	GACNNNNNNGTC	2 cut(s)	40, 866
EaeI	YGGCCR	1 cut(s)	3158
Eam1104I	CTCTTC	4 cut(s)	99, 177, 1215, 3032
EarI	CTCTTC	4 cut(s)	99, 177, 1215, 3032
Ecl136II	GAGCTC	1 cut(s)	284
Eco130I	CCWWGG	3 cut(s)	1455, 1647, 2019
Eco24I	GRGCYC	2 cut(s)	286, 1182
Eco31I	GGTCTC	2 cut(s)	1580, 2453
Eco32I	GATATC	1 cut(s)	849
Eco47I	GGWCC	1 cut(s)	904
Eco53kI	GAGCTC	1 cut(s)	284
Eco57I	CTGAAG	7 cut(s)	105, 1845, 2076, 2208, 2493, 2508, 3044
Eco81I	CCTNAGG	1 cut(s)	1356
Eco91I	GGTNACC	1 cut(s)	896
EcoICRI	GAGCTC	1 cut(s)	284
EcoNI	CCTNNNNNAGG	1 cut(s)	2432
EcoO109I	RGGNCCY	1 cut(s)	904
EcoO65I	GGTNACC	1 cut(s)	896
EcoRII	CCWGG	2 cut(s)	900, 1200
EcoRV	GATATC	1 cut(s)	849
EcoT14I	CCWWGG	3 cut(s)	1455, 1647, 2019
EcoT22I	ATGCAT	2 cut(s)	2754, 3259
EcoT38I	GRGCYC	2 cut(s)	286, 1182
ErhI	CCWWGG	3 cut(s)	1455, 1647, 2019
FalI	AAGNNNNNCTT	4 cut(s)	180, 212, 681, 713
FaqI	GGGAC	5 cut(s)	890, 1288, 1374, 2091, 2639
FbaI	TGATCA	3 cut(s)	97, 276, 633
FblI	GTMKAC	2 cut(s)	2215, 3213
Fnu4HI	GCNGC	9 cut(s)	192, 306, 366, 443, 642, 1851, 2610, 2634, 2675
FriOI	GRGCYC	2 cut(s)	286, 1182
Fsp4HI	GCNGC	9 cut(s)	192, 306, 366, 443, 642, 1851, 2610, 2634, 2675
FspBI	CTAG	7 cut(s)	815, 957, 1281, 1370, 2720, 2846, 3164
GluI	GCNGC	9 cut(s)	192, 306, 366, 443, 642, 1851, 2610, 2634, 2675
GsuI	CTGGAG	2 cut(s)	758, 1557
HaeIII	GGCC	2 cut(s)	2550, 3160
HapII	CCGG	5 cut(s)	966, 1230, 1572, 2109, 3004
HgaI	GACGC	2 cut(s)	203, 3199
Hin1I	GRCGYC	3 cut(s)	35, 49, 2652
HincII	GTYRAC	1 cut(s)	2686
HindII	GTYRAC	1 cut(s)	2686
HindIII	AAGCTT	4 cut(s)	401, 603, 1422, 3243
HpaII	CCGG	5 cut(s)	966, 1230, 1572, 2109, 3004
Hpy166II	GTNNAC	6 cut(s)	332, 985, 1877, 2216, 2686, 3214
Hpy8I	GTNNAC	6 cut(s)	332, 985, 1877, 2216, 2686, 3214
Hpy99I	CGWCG	3 cut(s)	16, 180, 219
HpyCH4III	ACNGT	6 cut(s)	841, 1519, 2320, 2599, 3103, 3228
HpyCH4IV	ACGT	4 cut(s)	35, 49, 861, 2652
HpyF10VI	GCNNNNNNNGC	4 cut(s)	74, 1421, 2877, 3124
HpyF3I	CTNAG	6 cut(s)	887, 1077, 1105, 1183, 1356, 2283
HpySE526I	ACGT	4 cut(s)	35, 49, 861, 2652
Hsp92I	GRCGYC	3 cut(s)	35, 49, 2652
Ksp22I	TGATCA	3 cut(s)	97, 276, 633
LguI	GCTCTTC	2 cut(s)	99, 1215
LmnI	GCTCC	4 cut(s)	1253, 1847, 2425, 2708
Lsp1109I	GCAGC	6 cut(s)	317, 377, 454, 1862, 2645, 2661
LweI	GCATC	2 cut(s)	218, 2407
MabI	ACCWGGT	1 cut(s)	900
MaeI	CTAG	7 cut(s)	815, 957, 1281, 1370, 2720, 2846, 3164
MaeII	ACGT	4 cut(s)	35, 49, 861, 2652
MbiI	CCGCTC	1 cut(s)	194
MfeI	CAATTG	4 cut(s)	1335, 2196, 3036, 3168
MflI	RGATCY	4 cut(s)	235, 548, 1676, 2095
MhlI	GDGCHC	4 cut(s)	8, 286, 1182, 2713
MlsI	TGGCCA	1 cut(s)	3160
MluNI	TGGCCA	1 cut(s)	3160
MlyI	GAGTC	4 cut(s)	1047, 1757, 1883, 3054
MmeI	TCCRAC	6 cut(s)	161, 850, 1045, 1725, 2746, 3022
Mox20I	TGGCCA	1 cut(s)	3160
Mph1103I	ATGCAT	2 cut(s)	2754, 3259
MroXI	GAANNNNTTC	5 cut(s)	108, 171, 1438, 2999, 3227
MscI	TGGCCA	1 cut(s)	3160
MseI	TTAA	8 cut(s)	240, 318, 617, 1145, 1499, 1598, 2151, 2867
MslI	CAYNNNNRTG	1 cut(s)	2901
Msp20I	TGGCCA	1 cut(s)	3160
MspA1I	CMGCKG	3 cut(s)	749, 2674, 3156
MspCI	CTTAAG	1 cut(s)	2866
MspI	CCGG	5 cut(s)	966, 1230, 1572, 2109, 3004
MspR9I	CCNGG	4 cut(s)	902, 1202, 2109, 3005
MunI	CAATTG	4 cut(s)	1335, 2196, 3036, 3168
Mva1269I	GAATGC	2 cut(s)	544, 2871
MvaI	CCWGG	2 cut(s)	902, 1202
MvnI	CGCG	1 cut(s)	214
MwoI	GCNNNNNNNGC	4 cut(s)	74, 1421, 2877, 3124
NciI	CCSGG	2 cut(s)	2109, 3005
NcoI	CCATGG	1 cut(s)	1455
NlaIV	GGNNCC	5 cut(s)	422, 906, 2097, 2549, 2778
NsiI	ATGCAT	2 cut(s)	2754, 3259
NspI	RCATGY	4 cut(s)	433, 1051, 1992, 2906
PaeI	GCATGC	1 cut(s)	1992
PagI	TCATGA	3 cut(s)	52, 100, 822
PaqCI	CACCTGC	1 cut(s)	1126
PciI	ACATGT	1 cut(s)	429
PciSI	GCTCTTC	2 cut(s)	99, 1215
PcsI	WCGNNNNNNNCGW	1 cut(s)	2548
PctI	GAATGC	2 cut(s)	544, 2871
PdmI	GAANNNNTTC	5 cut(s)	108, 171, 1438, 2999, 3227
PfeI	GAWTC	7 cut(s)	167, 501, 953, 1068, 1507, 1820, 2130
PflFI	GACNNNGTC	2 cut(s)	902, 1037
PinAI	ACCGGT	1 cut(s)	965
PkrI	GCNGC	9 cut(s)	193, 307, 367, 444, 643, 1852, 2611, 2635, 2676
PleI	GAGTC	4 cut(s)	1046, 1756, 1883, 3053
PpsI	GAGTC	4 cut(s)	1046, 1756, 1883, 3053
PpuMI	RGGWCCY	1 cut(s)	904
PscI	ACATGT	1 cut(s)	429
PsiI	TTATAA	3 cut(s)	1713, 2618, 2786
Psp124BI	GAGCTC	1 cut(s)	286
Psp5II	RGGWCCY	1 cut(s)	904
Psp6I	CCWGG	2 cut(s)	900, 1200
PspEI	GGTNACC	1 cut(s)	896
PspGI	CCWGG	2 cut(s)	900, 1200
PspN4I	GGNNCC	5 cut(s)	422, 906, 2097, 2549, 2778
PspPI	GGNCC	2 cut(s)	904, 2548
PspPPI	RGGWCCY	1 cut(s)	904
PsrI	GAACNNNNNNTAC	2 cut(s)	2523, 2555
PstI	CTGCAG	2 cut(s)	1481, 1908
PstNI	CAGNNNCTG	4 cut(s)	1355, 2237, 2399, 2471
PsuI	RGATCY	4 cut(s)	235, 548, 1676, 2095
PsyI	GACNNNGTC	2 cut(s)	902, 1037
PvuII	CAGCTG	3 cut(s)	749, 2674, 3156
RsaI	GTAC	7 cut(s)	1876, 1900, 2137, 2157, 2410, 2670, 3192
RsaNI	GTAC	7 cut(s)	1875, 1899, 2136, 2156, 2409, 2669, 3191
RseI	CAYNNNNRTG	1 cut(s)	2901
SacI	GAGCTC	1 cut(s)	286
SapI	GCTCTTC	2 cut(s)	99, 1215
SaqAI	TTAA	8 cut(s)	240, 318, 617, 1145, 1499, 1598, 2151, 2867
SatI	GCNGC	9 cut(s)	192, 306, 366, 443, 642, 1851, 2610, 2634, 2675
Sau96I	GGNCC	2 cut(s)	904, 2548
SchI	GAGTC	4 cut(s)	1047, 1757, 1883, 3054
ScrFI	CCNGG	4 cut(s)	902, 1202, 2109, 3005
SduI	GDGCHC	4 cut(s)	8, 286, 1182, 2713
SexAI	ACCWGGT	1 cut(s)	900
SfaNI	GCATC	2 cut(s)	218, 2407
SfcI	CTRYAG	3 cut(s)	1477, 1904, 2724
SinI	GGWCC	1 cut(s)	904
SmiMI	CAYNNNNRTG	1 cut(s)	2901
SmlI	CTYRAG	3 cut(s)	291, 1239, 2866
SmoI	CTYRAG	3 cut(s)	291, 1239, 2866
SpeI	ACTAGT	1 cut(s)	1280
SphI	GCATGC	1 cut(s)	1992
SsiI	CCGC	5 cut(s)	192, 641, 722, 911, 2610
SspI	AATATT	1 cut(s)	2958
SspMI	CTAG	7 cut(s)	815, 957, 1281, 1370, 2720, 2846, 3164
SstI	GAGCTC	1 cut(s)	286
StyD4I	CCNGG	4 cut(s)	900, 1200, 2107, 3003
StyI	CCWWGG	3 cut(s)	1455, 1647, 2019
TaaI	ACNGT	6 cut(s)	841, 1519, 2320, 2599, 3103, 3228
TaiI	ACGT	4 cut(s)	38, 52, 864, 2655
TaqI	TCGA	6 cut(s)	14, 223, 265, 1813, 1947, 2256
TatI	WGTACW	2 cut(s)	1874, 2668
TauI	GCSGC	3 cut(s)	194, 644, 2612
TfiI	GAWTC	7 cut(s)	167, 501, 953, 1068, 1507, 1820, 2130
Tru1I	TTAA	8 cut(s)	240, 318, 617, 1145, 1499, 1598, 2151, 2867
Tru9I	TTAA	8 cut(s)	240, 318, 617, 1145, 1499, 1598, 2151, 2867
TseI	GCWGC	6 cut(s)	305, 365, 442, 1850, 2633, 2674
TspGWI	ACGGA	5 cut(s)	36, 1050, 2261, 2386, 3221
Tth111I	GACNNNGTC	2 cut(s)	902, 1037
Vha464I	CTTAAG	1 cut(s)	2866
VpaK11BI	GGWCC	1 cut(s)	904
XagI	CCTNNNNNAGG	1 cut(s)	2432
XapI	RAATTY	2 cut(s)	1928, 2576
XceI	RCATGY	4 cut(s)	433, 1051, 1992, 2906
XmiI	GTMKAC	2 cut(s)	2215, 3213
XmnI	GAANNNNTTC	5 cut(s)	108, 171, 1438, 2999, 3227
XspI	CTAG	7 cut(s)	815, 957, 1281, 1370, 2720, 2846, 3164
ZraI	GACGTC	3 cut(s)	36, 50, 2653
Zsp2I	ATGCAT	2 cut(s)	2754, 3259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.