Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008228

Physical Location & Seq

Genomic Coordinates Forward (+)

29274598 .. 29288330

Gene Structure 13733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g37190.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3315 bp

ATGGCCTCGCGCGGCTCCAACTCCTCCGCGAACGGGCTGCTTCCGACGTCCAGGTCCGGCCGCCACCACCTCGACATGGAGTCCGGCGCCAAGGTCCGCCTCCCCACCGAATTCGGCGACCACGCCGCGTCGTCAAAGAAAGGCGATCACGACGAGGATGACGACCCCTTCGATATTGCTCAAACCAAGAACGCTTCTCACGCCACGCTTCGCCGATGGAGGCAAGCTGCTCTAGTGTTGAATGCTTCACGACGATTTCGGTACACGTTGGACTTAAAAAAGGAAGAAGAGAAAGACAGTAGAAGGCGTATGATTAGATCCCATGCACAAGTCATAAGAGCTGCATTGCTTTTCAAATTGGCTGGAGAACGGGAAACTGGGTTAAGCACAACAGTAACACCCGCAACTCCAAGTGGTGATTATGGAATTGGACATGAACAACTTGTTTCACTAACTAGAGAGCATAATATTTCCGCTCTACAGCAATATGGAGGGGTTAAAGGTATATCATCTATGATAAAAACAAATCTGGAGAAGGGAATTGATGGGGATGAAGCAGATTTAGTTAAACGAAGGGATGTCTTTGGATCAAATACGTATCCTCAGAAAAAAGGGCGGAGTTTCTTGAGGTTCCTTTGGGAAGCATGGCAAGATTTAACTCTGATAATCTTGATAATAGCTGCAGCAGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGTCTCATGGATGGTATGATGGAGGAAGCATTGCATTTGCTGTTATTCTTGTTATCATTGTTACAGCTGTTAGTGATTATCGACAATCTCTTCAGTTTCAAAATCTAAATGAGGAAAAGCAAAATATACAATTGGAGGTCATGAGAGGCGGTAGAACAGTAAAGATTTCAATATTTGATATTGTGGTTGGTGATGTTGTACCTCTCAGAATAGGTGATCAGGTCCCAGCTGATGGAATCTTAATTACTGGTCATTCTCTTGCGATTGATGAATCTAGTATGACTGGAGAGAGCAAAATTGTTCACAAGGATCAGAAGGCACCATTCTTAATGTCTGGTTGCAAAATAGCTGATGGAGTCGGTACAATGCTGGTAACAAGTGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGTATCTCTGAGGACACCGGTGAAGAAACTCCTTTACAGGTGCGCTTAAATGGACTTGCGACTTTTATAGGCATAGTTGGGCTTTCAGTAGCTGCTTTGGTGCTTCTTGTTCTTTGGATCAGATACTTTAGTGGACAAACAAAAGATACAGATGGAAAAGTGGAATTTGAATCTGGGAAGACTAGCATTAGTAAGGCTGTAGATGGAGCTGTAAAAATTTTCACCATTGCTGTTACCATTGTAGTTGTTGCCGTGCCTGAAGGGCTACCTTTGGCTGTTACCTTGACGCTAGCATACTCAATGAGGAAAATGATGGCGGATAAGGCATTGGTGCGTAGACTGTCGGCTTGTGAAACTATGGGCTCAGCAACCACAATTTGCAGTGATAAAACTGGCACGTTGACTTTGAATCAGATGACTGTGGTTGAGGCATATGTTGGGAGAAATAAGATACATCCACCAGATGATTCCTCACAGTTGCATTCACTGGTTTCCACTCTGCTAAGTGAGGGAATTGCACAGAACACCAGTGGAAATGTGTTTGAACCAGAAGGTGGTGAAGTAGAGATTTCTGGATCTCCCACAGAAAAGGCTATACTTTCATGGGCACTGAAGTTGGGAATGAAGTTCAACGCTATCAGATCCGAGTCAACGATCCTTCATGTGTTCCCTTTCAACTCAGAGAAAAAGCGAGGAGGTGTTGCAGTGAAAGGGACTGACTCTAAAGTTCATATACATTGGAAGGGCGCTGCGGAGATAGTTTTAGCCTCGTGTACAGGGTACCTTGACTCAAATGGGTGCTTGCAGGACATTACTCAAGATAAGGAGTTTCTCAGGGAAGCTATTGATAGCATGGCAGCAAGCAGTTTGCGATGTGTTGCCATTGCATACAGACCATATGAAATGGACAAAGTTCCCACCGAGGAAGAGAATTTAAGTCAATGGGCTTTACCTGAAGATAATCTAGTGTTGCTTGCTATTGTGGGTATAAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCAGTGAGATTATGCACAGAAGCTGGTGTAAAGGTAAGAATGGTCACTGGAGACAATCTTCAGACAGCAAAAGCAATCGCGTTAGAGTGTGGAATTCTTTGTTCTGTTGAAGATGCTACTGAGCCTAATATCATCGAAGGAAAAACATTCCGTGAATTATCTGAAAAAGAAAGAGAAGAAGTTGCCAAGAAAATAACGGTAATGGGTAGATCTTCCCCTAATGACAAGTTATTGCTCGTGCAAGCATTACGGAAGGGTGGAGATGTTGTTGCAGTGACAGGAGATGGCACTAATGATGCTCCTGCCCTTCACGAGGCTGATATTGGTCTATCTATGGGCATTCAAGGAACTGAAGTTGCAAAAGAAAGTTCGGATATCATTATCTTGGATGACAATTTTGCTTCTGTTGTAAAGGTTGTTCGCTGGGGACGTTCTGTGTATGCAAATATACAGAAATTTATCCAGTTTCAGCTCACTGTTAATGTTGCTGCTCTCACAATTAATGTTGTTGCAGCAATATCCGCTGGTCGTGTTCCTTTAAATGCCGTACAGCTTCTGTGGGTTAACTTGATCATGGATACTCTAGGAGCACTTGCACTGGCAACTGAACCACCTACAGACGACCTTATGCATAGAACACCTGTTGGCAGAAGGGCACCTCTTATAACCAACATCATGTGGAGGAACCTACTGATTCAGGCTTTGTATCAAGTTTGTGTGCTCCTTGTCCTCAACTTTATGGGTAATACTATTCTTGGTCTGAAAGAGGACAACACACAAGTTGCCAGTGTGAAGAATACTGTCATATTCAATGCTTTTGTCTTCTGCCAAATTTTTAATGAGTTTAATGCTCGAAAGCCTGAAGAACTAAATGTCTTTAGTGGAGTGACTAACAACTACCTCTTTATGGGAATAATAGGCGTCACATTTTTCCTTCAGATAATGATCATTCAGTTTCTTGGAACCTTTGCAAAAACTGTGGTACTTGATTGGCAGCATTGGCTTATTTGCTTTGGTATTGCCATCATCAGCTGGCCTCTTGCTGTTGTTGGGAAACTAATTCCGGTGCCTAAGACTCCAGTCTCCCAGTACTGCAGGCGCGCATTTCAGCCATGCAGGCAGCGATTTCAGCGAAGCAGAACTTCACGCAATGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0007338 GO:0008150 GO:0008324 GO:0009555 GO:0009566 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0019953 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1105

Amino Acids

120.5

Weight (kDa)

6.85

Isoelectric Point (pI)

39.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	54 - 97	2.2e-17	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	163 - 231	1.3e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	284 - 380	4.4e-19	P-type ATPase actuator domain
Hydrolase	PF00702	504 - 826	2.2e-15	haloacid dehalogenase-like hydrolase
Cation_ATPase	PF13246	544 - 715	1.7e-31	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	897 - 1072	1.7e-43	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0008228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21180
fragaria_vesca	FvH4_6g37190 FvH4_6g37190 FvH4_6g37190 FvH4_6g37190
malus_domestica	MD09G1160300.v1.1 MD17G1146100.v1.1
prunus_persica	Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1
pyrus_communis	pycom09g07890 pycom17g13890
rosa_chinensis	RchiOBHm_Chr2g0149841
rosa_laevigata	RLG00000020450
rosa_multiflora	Rmu_ssc0000308.1_g000029
rosa_roxburghii	Rroxscaffold_2G00097600
rosa_rugosa	Rorug02G0417000
rosa_samantha	Rh2BG487700 Rh2CG461600 Rh2DG496500
rosa_wichuraiana	Rw2G038820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2822
AasI	GACNNNNNNGTC	1 cut(s)	52
AatII	GACGTC	1 cut(s)	50
Acc65I	GGTACC	1 cut(s)	1917
AccB1I	GGYRCC	5 cut(s)	86, 1039, 1917, 2812, 3223
AccB7I	CCANNNNNTGG	2 cut(s)	953, 1691
AccBSI	CCGCTC	1 cut(s)	476
AccI	GTMKAC	1 cut(s)	1474
AccII	CGCG	6 cut(s)	10, 12, 29, 128, 2237, 3258
AclWI	GGATC	9 cut(s)	312, 595, 1038, 1262, 1720, 1773, 1786, 2126, 2139
AcoI	YGGCCR	1 cut(s)	58
AcsI	RAATTY	7 cut(s)	110, 1301, 1353, 2068, 2250, 2612, 2988
AcuI	CTGAAG	8 cut(s)	797, 1416, 1769, 2112, 2201, 2529, 3039, 3077
AcyI	GRCGYC	3 cut(s)	47, 87, 3078
AfaI	GTAC	8 cut(s)	263, 921, 1084, 1912, 1919, 2706, 3141, 3248
AfiI	CCNNNNNNNGG	6 cut(s)	33, 76, 953, 1691, 2470, 3064
AflIII	ACRYGT	1 cut(s)	264
AgeI	ACCGGT	1 cut(s)	1154
AhdI	GACNNNNNGTC	1 cut(s)	79
AjnI	CCWGG	2 cut(s)	50, 2143
Alw21I	GWGCWC	2 cut(s)	2749, 2880
Alw26I	GTCTC	3 cut(s)	729, 2202, 3244
AlwI	GGATC	9 cut(s)	312, 595, 1038, 1262, 1720, 1773, 1786, 2126, 2139
AlwNI	CAGNNNCTG	3 cut(s)	1229, 2180, 2713
AoxI	GGCC	3 cut(s)	3, 58, 3191
ApoI	RAATTY	7 cut(s)	110, 1301, 1353, 2068, 2250, 2612, 2988
ArsI	GACNNNNNNTTYG	2 cut(s)	152, 184
AseI	ATTAAT	1 cut(s)	2658
AsiGI	ACCGGT	1 cut(s)	1154
Asp718I	GGTACC	1 cut(s)	1917
AspLEI	GCGC	6 cut(s)	12, 89, 1182, 1886, 3258, 3260
AspS9I	GGNCC	3 cut(s)	54, 94, 943
AsuHPI	GGTGA	6 cut(s)	428, 923, 947, 1169, 1351, 1706
AsuNHI	GCTAGC	1 cut(s)	1426
AvaII	GGWCC	3 cut(s)	54, 94, 943
BaeGI	GKGCMC	2 cut(s)	1747, 2815
BaeI	ACNNNNGTAYC	2 cut(s)	1252, 1285
BamHI	GGATCC	1 cut(s)	2131
BanI	GGYRCC	5 cut(s)	86, 1039, 1917, 2812, 3223
BanII	GRGCYC	1 cut(s)	1502
BauI	CACGAG	3 cut(s)	1906, 2393, 2468
BbsI	GAAGAC	2 cut(s)	1322, 2971
Bbv12I	GWGCWC	2 cut(s)	2749, 2880
BceAI	ACGGC	2 cut(s)	1373, 2687
BcgI	CGANNNNNNTGC	2 cut(s)	19, 53
BciT130I	CCWGG	2 cut(s)	52, 2145
BciVI	GTATCC	2 cut(s)	609, 2728
BclI	TGATCA	3 cut(s)	937, 2727, 3102
BcoDI	GTCTC	3 cut(s)	729, 2202, 3244
BfaI	CTAG	7 cut(s)	233, 456, 996, 1320, 1427, 2102, 2741
BfmI	CTRYAG	5 cut(s)	479, 681, 1335, 2772, 3250
BfoI	RGCGCY	2 cut(s)	90, 1887
BfuI	GTATCC	2 cut(s)	609, 2728
BglI	GCCNNNNNGGC	2 cut(s)	1399, 3274
BglII	AGATCT	1 cut(s)	2366
BlpI	GCTNAGC	1 cut(s)	1501
BmcAI	AGTACT	1 cut(s)	3248
Bme1390I	CCNGG	2 cut(s)	52, 2145
Bme18I	GGWCC	3 cut(s)	54, 94, 943
BmeRI	GACNNNNNGTC	1 cut(s)	79
BmgT120I	GGNCC	3 cut(s)	54, 94, 943
BmrFI	CCNGG	2 cut(s)	52, 2145
BmrI	ACTGGG	2 cut(s)	387, 3238
BmsI	GCATC	3 cut(s)	2146, 2260, 2443
BmtI	GCTAGC	1 cut(s)	1430
BmuI	ACTGGG	2 cut(s)	387, 3238
BoxI	GACNNNNGTC	1 cut(s)	3236
BpiI	GAAGAC	2 cut(s)	1322, 2971
BpmI	CTGGAG	5 cut(s)	384, 551, 1026, 2226, 3219
Bpu1102I	GCTNAGC	1 cut(s)	1501
BpuEI	CTTGAG	2 cut(s)	646, 1938
BsaAI	YACGTR	1 cut(s)	597
BsaBI	GATNNNNATC	1 cut(s)	3101
BsaHI	GRCGYC	3 cut(s)	47, 87, 3078
BsaJI	CCNNGG	3 cut(s)	90, 2058, 2143
BsaWI	WCCGGW	2 cut(s)	1154, 3220
BsaXI	ACNNNNNCTCC	2 cut(s)	2409, 2439
Bsc4I	CCNNNNNNNGG	6 cut(s)	33, 76, 953, 1691, 2470, 3064
Bse118I	RCCGGY	1 cut(s)	1154
Bse3DI	GCAATG	5 cut(s)	344, 750, 1362, 2019, 3313
Bse8I	GATNNNNATC	1 cut(s)	3101
BseBI	CCWGG	2 cut(s)	52, 2145
BseDI	CCNNGG	3 cut(s)	90, 2058, 2143
BseGI	GGATG	6 cut(s)	163, 556, 583, 737, 1591, 2551
BseJI	GATNNNNATC	1 cut(s)	3101
BseLI	CCNNNNNNNGG	6 cut(s)	33, 76, 953, 1691, 2470, 3064
BseMI	GCAATG	5 cut(s)	344, 750, 1362, 2019, 3313
BseMII	CTCAG	7 cut(s)	617, 940, 1137, 1515, 1830, 1984, 2268
BsePI	GCGCGC	1 cut(s)	3256
BseRI	GAGGAG	2 cut(s)	13, 1845
BseSI	GKGCMC	2 cut(s)	1747, 2815
BseX3I	CGGCCG	1 cut(s)	58
BseYI	CCCAGC	2 cut(s)	946, 2580
Bsh1236I	CGCG	6 cut(s)	10, 12, 29, 128, 2237, 3258
Bsh1285I	CGRYCG	1 cut(s)	61
BshFI	GGCC	3 cut(s)	5, 60, 3193
BshNI	GGYRCC	5 cut(s)	86, 1039, 1917, 2812, 3223
BshTI	ACCGGT	1 cut(s)	1154
BsiEI	CGRYCG	1 cut(s)	61
BsiHKAI	GWGCWC	2 cut(s)	2749, 2880
BsiSI	CCGG	4 cut(s)	57, 84, 1155, 3221
BslFI	GGGAC	3 cut(s)	929, 1864, 2598
BslI	CCNNNNNNNGG	6 cut(s)	33, 76, 953, 1691, 2470, 3064
BsmAI	GTCTC	3 cut(s)	729, 2202, 3244
BsmFI	GGGAC	3 cut(s)	929, 1864, 2598
BsmI	GAATGC	3 cut(s)	247, 1618, 2496
BsnI	GGCC	3 cut(s)	5, 60, 3193
Bsp1286I	GDGCHC	5 cut(s)	1502, 1747, 2749, 2815, 2880
Bsp1407I	TGTACA	1 cut(s)	1910
Bsp1720I	GCTNAGC	1 cut(s)	1501
BspANI	GGCC	3 cut(s)	5, 60, 3193
BspCNI	CTCAG	7 cut(s)	616, 939, 1138, 1514, 1829, 1983, 2269
BspFNI	CGCG	6 cut(s)	10, 12, 29, 128, 2237, 3258
BspHI	TCATGA	1 cut(s)	861
BspMAI	CTGCAG	2 cut(s)	685, 3254
BspOI	GCTAGC	1 cut(s)	1430
BspPI	GGATC	9 cut(s)	312, 595, 1038, 1262, 1720, 1773, 1786, 2126, 2139
BspT107I	GGYRCC	5 cut(s)	86, 1039, 1917, 2812, 3223
BsrBI	CCGCTC	1 cut(s)	476
BsrDI	GCAATG	5 cut(s)	344, 750, 1362, 2019, 3313
BsrFI	RCCGGY	1 cut(s)	1154
BsrGI	TGTACA	1 cut(s)	1910
BssAI	RCCGGY	1 cut(s)	1154
BssECI	CCNNGG	3 cut(s)	90, 2058, 2143
BssHII	GCGCGC	1 cut(s)	3256
BssNI	GRCGYC	3 cut(s)	47, 87, 3078
BssSI	CACGAG	3 cut(s)	1906, 2393, 2468
BssT1I	CCWWGG	1 cut(s)	90
Bst2BI	CACGAG	3 cut(s)	1906, 2393, 2468
Bst2UI	CCWGG	2 cut(s)	52, 2145
Bst6I	CTCTTC	3 cut(s)	282, 816, 2058
BstACI	GRCGYC	3 cut(s)	47, 87, 3078
BstAUI	TGTACA	1 cut(s)	1910
BstBAI	YACGTR	1 cut(s)	597
BstDEI	CTNAG	9 cut(s)	603, 926, 1146, 1501, 1640, 1816, 1970, 2277, 3228
BstENI	CCTNNNNNAGG	1 cut(s)	2468
BstF5I	GGATG	6 cut(s)	163, 556, 583, 737, 1591, 2551
BstFNI	CGCG	6 cut(s)	10, 12, 29, 128, 2237, 3258
BstH2I	RGCGCY	2 cut(s)	90, 1887
BstHHI	GCGC	6 cut(s)	12, 89, 1182, 1886, 3258, 3260
BstMAI	GTCTC	3 cut(s)	729, 2202, 3244
BstMCI	CGRYCG	1 cut(s)	61
BstMWI	GCNNNNNNNGC	7 cut(s)	200, 1399, 1460, 2678, 3157, 3274, 3286
BstNI	CCWGG	2 cut(s)	52, 2145
BstPAI	GACNNNNGTC	1 cut(s)	3236
BstSCI	CCNGG	2 cut(s)	50, 2143
BstSFI	CTRYAG	5 cut(s)	479, 681, 1335, 2772, 3250
BstSLI	GKGCMC	2 cut(s)	1747, 2815
BstSNI	TACGTA	1 cut(s)	597
BstUI	CGCG	6 cut(s)	10, 12, 29, 128, 2237, 3258
BstV2I	GAAGAC	2 cut(s)	1322, 2971
BstX2I	RGATCY	5 cut(s)	317, 1712, 1778, 2131, 2366
BstYI	RGATCY	5 cut(s)	317, 1712, 1778, 2131, 2366
BstZI	CGGCCG	1 cut(s)	58
BsuI	GTATCC	2 cut(s)	609, 2728
BsuRI	GGCC	3 cut(s)	5, 60, 3193
BtgZI	GCGATG	1 cut(s)	2023
BtsCI	GGATG	6 cut(s)	163, 556, 583, 737, 1591, 2551
BtsI	GCAGTG	5 cut(s)	693, 1525, 1848, 2166, 2436
CaiI	CAGNNNCTG	3 cut(s)	1229, 2180, 2713
CciI	TCATGA	1 cut(s)	861
CfoI	GCGC	6 cut(s)	12, 89, 1182, 1886, 3258, 3260
Cfr10I	RCCGGY	1 cut(s)	1154
Cfr13I	GGNCC	3 cut(s)	54, 94, 943
CseI	GACGC	3 cut(s)	117, 1432, 3067
Csp6I	GTAC	8 cut(s)	262, 920, 1083, 1911, 1918, 2705, 3140, 3247
CspAI	ACCGGT	1 cut(s)	1154
CspCI	CAANNNNNGTGG	2 cut(s)	3117, 3152
CviQI	GTAC	8 cut(s)	262, 920, 1083, 1911, 1918, 2705, 3140, 3247
DdeI	CTNAG	9 cut(s)	603, 926, 1146, 1501, 1640, 1816, 1970, 2277, 3228
DinI	GGCGCC	1 cut(s)	88
DraI	TTTAAA	1 cut(s)	2697
DrdI	GACNNNNNNGTC	1 cut(s)	52
DriI	GACNNNNNGTC	1 cut(s)	79
DseDI	GACNNNNNNGTC	1 cut(s)	52
EaeI	YGGCCR	1 cut(s)	58
EagI	CGGCCG	1 cut(s)	58
Eam1104I	CTCTTC	3 cut(s)	282, 816, 2058
Eam1105I	GACNNNNNGTC	1 cut(s)	79
EarI	CTCTTC	3 cut(s)	282, 816, 2058
EciI	GGCGGA	3 cut(s)	86, 631, 1469
EclXI	CGGCCG	1 cut(s)	58
Eco105I	TACGTA	1 cut(s)	597
Eco130I	CCWWGG	1 cut(s)	90
Eco24I	GRGCYC	1 cut(s)	1502
Eco32I	GATATC	1 cut(s)	2533
Eco47I	GGWCC	3 cut(s)	54, 94, 943
Eco52I	CGGCCG	1 cut(s)	58
Eco57I	CTGAAG	8 cut(s)	797, 1416, 1769, 2112, 2201, 2529, 3039, 3077
EcoNI	CCTNNNNNAGG	1 cut(s)	2468
EcoO109I	RGGNCCY	1 cut(s)	943
EcoRI	GAATTC	2 cut(s)	110, 2250
EcoRII	CCWGG	2 cut(s)	50, 2143
EcoRV	GATATC	1 cut(s)	2533
EcoT14I	CCWWGG	1 cut(s)	90
EcoT22I	ATGCAT	1 cut(s)	2790
EcoT38I	GRGCYC	1 cut(s)	1502
EgeI	GGCGCC	1 cut(s)	88
EheI	GGCGCC	1 cut(s)	88
ErhI	CCWWGG	1 cut(s)	90
FalI	AAGNNNNNCTT	2 cut(s)	3283, 3315
FaqI	GGGAC	3 cut(s)	929, 1864, 2598
FauI	CCCGC	1 cut(s)	409
FauNDI	CATATG	2 cut(s)	1570, 2035
FbaI	TGATCA	3 cut(s)	937, 2727, 3102
FblI	GTMKAC	1 cut(s)	1474
FokI	GGATG	6 cut(s)	170, 563, 590, 744, 1578, 2558
FriOI	GRGCYC	1 cut(s)	1502
FspBI	CTAG	7 cut(s)	233, 456, 996, 1320, 1427, 2102, 2741
GlaI	GCGC	6 cut(s)	11, 88, 1181, 1885, 3257, 3259
GsaI	CCCAGC	2 cut(s)	950, 2584
GsuI	CTGGAG	5 cut(s)	384, 551, 1026, 2226, 3219
HaeII	RGCGCY	2 cut(s)	90, 1887
HaeIII	GGCC	3 cut(s)	5, 60, 3193
HapII	CCGG	4 cut(s)	57, 84, 1155, 3221
HgaI	GACGC	3 cut(s)	117, 1432, 3067
HhaI	GCGC	6 cut(s)	12, 89, 1182, 1886, 3258, 3260
Hin1I	GRCGYC	3 cut(s)	47, 87, 3078
Hin6I	GCGC	6 cut(s)	10, 87, 1180, 1884, 3256, 3258
HinP1I	GCGC	6 cut(s)	10, 87, 1180, 1884, 3256, 3258
HincII	GTYRAC	3 cut(s)	1539, 1788, 2722
HindII	GTYRAC	3 cut(s)	1539, 1788, 2722
HpaI	GTTAAC	1 cut(s)	2722
HpaII	CCGG	4 cut(s)	57, 84, 1155, 3221
HphI	GGTGA	6 cut(s)	428, 923, 947, 1169, 1351, 1706
Hpy166II	GTNNAC	8 cut(s)	264, 1024, 1271, 1475, 1539, 1788, 1911, 2722
Hpy188III	TCNNGA	9 cut(s)	149, 249, 530, 625, 670, 862, 1710, 1955, 2468
Hpy8I	GTNNAC	8 cut(s)	264, 1024, 1271, 1475, 1539, 1788, 1911, 2722
Hpy99I	CGWCG	4 cut(s)	49, 133, 155, 255
HpyCH4IV	ACGT	5 cut(s)	47, 266, 596, 1535, 2587
HpyF10VI	GCNNNNNNNGC	7 cut(s)	200, 1399, 1460, 2678, 3157, 3274, 3286
HpyF3I	CTNAG	9 cut(s)	603, 926, 1146, 1501, 1640, 1816, 1970, 2277, 3228
HpySE526I	ACGT	5 cut(s)	47, 266, 596, 1535, 2587
Hsp92I	GRCGYC	3 cut(s)	47, 87, 3078
HspAI	GCGC	6 cut(s)	10, 87, 1180, 1884, 3256, 3258
KasI	GGCGCC	1 cut(s)	86
KpnI	GGTACC	1 cut(s)	1921
Ksp22I	TGATCA	3 cut(s)	937, 2727, 3102
KspAI	GTTAAC	1 cut(s)	2722
LmnI	GCTCC	5 cut(s)	20, 1343, 2461, 2744, 2883
LweI	GCATC	3 cut(s)	2146, 2260, 2443
MaeI	CTAG	7 cut(s)	233, 456, 996, 1320, 1427, 2102, 2741
MaeII	ACGT	5 cut(s)	47, 266, 596, 1535, 2587
MaeIII	GTNAC	9 cut(s)	394, 781, 1093, 1369, 1414, 2200, 2431, 3043, 3079
MbiI	CCGCTC	1 cut(s)	476
MfeI	CAATTG	1 cut(s)	851
MflI	RGATCY	5 cut(s)	317, 1712, 1778, 2131, 2366
MhlI	GDGCHC	5 cut(s)	1502, 1747, 2749, 2815, 2880
Mly113I	GGCGCC	1 cut(s)	87
MlyI	GAGTC	6 cut(s)	89, 1086, 1793, 1850, 1919, 3226
MmeI	TCCRAC	4 cut(s)	42, 68, 249, 1084
Mph1103I	ATGCAT	1 cut(s)	2790
MspA1I	CMGCKG	4 cut(s)	788, 950, 2681, 3189
MspI	CCGG	4 cut(s)	57, 84, 1155, 3221
MspR9I	CCNGG	2 cut(s)	52, 2145
MunI	CAATTG	1 cut(s)	851
Mva1269I	GAATGC	3 cut(s)	247, 1618, 2496
MvaI	CCWGG	2 cut(s)	52, 2145
MvnI	CGCG	6 cut(s)	10, 12, 29, 128, 2237, 3258
MwoI	GCNNNNNNNGC	7 cut(s)	200, 1399, 1460, 2678, 3157, 3274, 3286
NarI	GGCGCC	1 cut(s)	87
NdeI	CATATG	2 cut(s)	1570, 2035
NheI	GCTAGC	1 cut(s)	1426
NmuCI	GTSAC	4 cut(s)	2200, 2431, 3043, 3079
NsiI	ATGCAT	1 cut(s)	2790
PagI	TCATGA	1 cut(s)	861
PauI	GCGCGC	1 cut(s)	3256
PcsI	WCGNNNNNNNCGW	3 cut(s)	159, 168, 2584
PctI	GAATGC	3 cut(s)	247, 1618, 2496
PfeI	GAWTC	7 cut(s)	957, 992, 1107, 1307, 1546, 1604, 2851
PflMI	CCANNNNNTGG	2 cut(s)	953, 1691
PinAI	ACCGGT	1 cut(s)	1154
PleI	GAGTC	6 cut(s)	88, 1085, 1792, 1850, 1919, 3226
PluTI	GGCGCC	1 cut(s)	90
PpsI	GAGTC	6 cut(s)	88, 1085, 1792, 1850, 1919, 3226
Ppu21I	YACGTR	1 cut(s)	597
PpuMI	RGGWCCY	1 cut(s)	943
PshAI	GACNNNNGTC	1 cut(s)	3236
PshBI	ATTAAT	1 cut(s)	2658
PsiI	TTATAA	1 cut(s)	2822
Psp5II	RGGWCCY	1 cut(s)	943
Psp6I	CCWGG	2 cut(s)	50, 2143
PspFI	CCCAGC	2 cut(s)	946, 2580
PspGI	CCWGG	2 cut(s)	50, 2143
PspPI	GGNCC	3 cut(s)	54, 94, 943
PspPPI	RGGWCCY	1 cut(s)	943
PsrI	GAACNNNNNNTAC	2 cut(s)	2559, 2591
PstI	CTGCAG	2 cut(s)	685, 3254
PstNI	CAGNNNCTG	3 cut(s)	1229, 2180, 2713
PsuI	RGATCY	5 cut(s)	317, 1712, 1778, 2131, 2366
PteI	GCGCGC	1 cut(s)	3256
PvuII	CAGCTG	3 cut(s)	788, 950, 3189
RsaI	GTAC	8 cut(s)	263, 921, 1084, 1912, 1919, 2706, 3141, 3248
RsaNI	GTAC	8 cut(s)	262, 920, 1083, 1911, 1918, 2705, 3140, 3247
Sau96I	GGNCC	3 cut(s)	54, 94, 943
ScaI	AGTACT	1 cut(s)	3248
SchI	GAGTC	6 cut(s)	89, 1086, 1793, 1850, 1919, 3226
ScrFI	CCNGG	2 cut(s)	52, 2145
SduI	GDGCHC	5 cut(s)	1502, 1747, 2749, 2815, 2880
SfaNI	GCATC	3 cut(s)	2146, 2260, 2443
SfcI	CTRYAG	5 cut(s)	479, 681, 1335, 2772, 3250
SfoI	GGCGCC	1 cut(s)	88
SgrAI	CRCCGGYG	1 cut(s)	1154
SinI	GGWCC	3 cut(s)	54, 94, 943
SmlI	CTYRAG	2 cut(s)	625, 1953
SmoI	CTYRAG	2 cut(s)	625, 1953
SnaBI	TACGTA	1 cut(s)	597
SspDI	GGCGCC	1 cut(s)	86
SspI	AATATT	2 cut(s)	469, 894
SspMI	CTAG	7 cut(s)	233, 456, 996, 1320, 1427, 2102, 2741
StyD4I	CCNGG	2 cut(s)	50, 2143
StyI	CCWWGG	1 cut(s)	90
TaiI	ACGT	5 cut(s)	50, 269, 599, 1538, 2590
TaqI	TCGA	5 cut(s)	72, 171, 802, 2292, 3010
TatI	WGTACW	2 cut(s)	1910, 3246
TauI	GCSGC	3 cut(s)	15, 63, 128
TfiI	GAWTC	7 cut(s)	957, 992, 1107, 1307, 1546, 1604, 2851
TseFI	GTSAC	4 cut(s)	2200, 2431, 3043, 3079
Tsp45I	GTSAC	4 cut(s)	2200, 2431, 3043, 3079
TspDTI	ATGAA	8 cut(s)	450, 567, 1005, 1728, 1775, 1787, 1856, 2052
TspGWI	ACGGA	2 cut(s)	2297, 2422
Van91I	CCANNNNNTGG	2 cut(s)	953, 1691
VpaK11BI	GGWCC	3 cut(s)	54, 94, 943
VspI	ATTAAT	1 cut(s)	2658
XagI	CCTNNNNNAGG	1 cut(s)	2468
XapI	RAATTY	7 cut(s)	110, 1301, 1353, 2068, 2250, 2612, 2988
XmiI	GTMKAC	1 cut(s)	1474
XspI	CTAG	7 cut(s)	233, 456, 996, 1320, 1427, 2102, 2741
ZraI	GACGTC	1 cut(s)	48
ZrmI	AGTACT	1 cut(s)	3248
Zsp2I	ATGCAT	1 cut(s)	2790

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.