Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0008228

Physical Location & Seq

Genomic Coordinates Reverse (-)

1333098 .. 1348850

Gene Structure 15753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G018900.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3297 bp

ATGGCCGCGTCCCGTGGTTCGTCGTCTTCTACGAACGGCTTGTTGCCGGCCTCGTTGTCAGGGAGGAACCACCCAGACATGGAGGCAGGGGCACGCGTCGGCCTCGAGACTGAGTTCGACGACGACGCCGCCGCAGCAAACGACGTGCCGTCCACCACCGATCCCTTCGACATTGCCAACACCAAGAACGCGCCTCCCGAGACGCTCAAGAGATGGAGGCAAGCGGCACTCGTGCTAAATGCTTCCCGACGATTCCGGTACACCATGGACTTAAAGAAAGAGGAAGAAAAAGAAAATAGGAGGAGGATGATTAGATCCCATGCACAAGTCATAAGAGCAGCACTGCTATTCAGATTGGCTGGAGAAAGGGAGCACGGGTTAGGCACAACAGTTGCACCCCCAACTTCAAGTGGTGATTATGGAATTGCACTAGAACAACTTGTTTCATTGACCAGGGAGAACAATTTTAACGCTCTACAGCAATATGGAGGGGCTAAAGGCATATCAGCATTGCTAAAAACAAACTTGGAGAAGGGAGTTGATGAGGACGAGATGGATGTAGAAAGAAGAAAGAATGTTTTTGGATCCAATACATATCCTCGGAAAAAAGGGCGGAGTTTCTTGGGGTTTCTTTGGGAAGCTTGGCAAGACTTAACTCTAATAATCTTGATCATAGCTGCAGTGGTGTCATTGGTTCTTGGAATAAAAACTGAGGGTCTTGCTGAAGGATGGTATGATGGATCAAGCATTTTCTTTGCTGTTTTCCTTGTTATAGTTGTTACAGCTATTAGTGATTATCGGCAATCTCTTCAGTTTCAAAATTTAAATGCGGAAAAGGAAAATATACAACTGGAGGTCATGAGAGGTGGTAGAATAGTAAAGATTTCGATATTTGATATTGTGGTTGGTGATGTTATACCTCTCAGAATAGGCGATCAGGTCCCTGCTGATGGAATCTTAATAACTGGTCATTCTCTTGCCATTGATGAATCTAGCATGACTGGTGAAAGCAAGATTGTTCACAAGGATCAGAAGACACCTTTCTTAATGTCAGGTTGCAAAGTGGCTGATGGAGTGGGTACTATGCTGGTAACTGGTGTTGGAATCAACACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATAACGGCGAAGAAACTCCTTTACAGGTGCGCTTGAATGGAGTTGCAACTTTTATTGGCATAGTTGGGCTTTCAGTAGCTGTTTTGGTGCTTGCTGTCCTGTGGGGCAGATACTTCACTGGAAATTCAAGAGATGCAGATGGAACCGTCCAATTTATAGCTGGCCAGACTAGCACTGGCAAAGCTATAGATGGAGCAGTAAAAGTGTTTACCATTGCCGTCACCATTGTGGTTGTTGCAGTTCCTGAAGGGCTACCTTTGGCTGTTACCCTGACGCTAGCATACTCGATGAAGAAAATGATGGCAGATAAGGCATTGGTGCGTAGACTGTCAGCCTGTGAAACTATGGGCTCAGCAACAACAATATGTAGTGATAAAACTGGGACATTGACTTTGAACCAGATGACTGTGGTTGAAGCATATGTTGGGAAAAAGAAGATAAATCTGCCAGACGATTCCTCACAGTTGCATCCACAAGTTTCCACTCTGCTAAGTGAGGGCATTGCACAAAATACCACTGGCAACGTATTTGAGCCAAAGCAGGGTGGTGAAGTAGAGATTTCTGGGTCTCCTACAGAAAAGGCTATACTTTCATGGGCAGTCAAGTTGGGGATGAAGTTTGATTTTATCAGATCAGAGTCTACAGTTCTTCATGTTTTCCCTTTCAACTCAGAGAAAAAGCGAGGTGGTGTTGCACTAAAACAGACTGACTCTAAAGTTCATATACATTGGAAAGGGGCAGCAGAGATAGTTTTAGCCTCGTGTACGGAGTATCTTGACTCAAACGGTTGCTCGCAGAATATTAACGAAGATAAGGAATTTTTCAAGGCAGCTATTGATGACATGGCAGCAAGCAGTTTGCGATGTGTTGCCATTGCATACAGATCATATGAATTGGACAAAGTTCCAACTGAGGAAGAGCATTTAAGTCAATGGGCTTTACCAGAAGATAACCTTGTTTTGCTTGGTATTATTGGTATAAAGGATCCTTGTCGTCCTGGTGTTAAAGATGCAGTGAGACTATGCACAGAAGCTGGTGTTAAGGTACGGATGGTCACTGGAGACAATCTTCAGACAGCAAAAGCAATCGCATTAGAGTGTGGAATACTACTTTCACTCGAAGATGCTACTGAGCCTAATATCATTGAAGGAAAAACATTCCGTGCATTATCTGAAAAAGAAAGGGAACAAGTTGCCAAGATAATAACAGTAATGGGCAGATCTTCCCCTAATGACAAGTTGTTGCTTGTGCAAGCATTACGTAAGGGTGGTGATGTTGTCGCAGTAACAGGAGATGGCACTAATGATGCTCCCGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTCAAGGAACTGAAGTTGCAAAAGAAAGTTCTGATATCATTATTTTGGATGATAACTTTGCTTCTGTTGTAAAGGTTGTTCGCTGGGGACGTTCTGTGTATGCAAATATTCAGAAATTTATCCAATTCCAACTTACTGTTAATGTTGCAGCTCTTGTAATTAATGTTGTGGCAGCGATATCCTCTGGTCGTGTCCCATTAAATGCTGTACAGCTTCTGTGGGTTAACTTGATCATGGATACTCTAGGAGCACTTGCATTGGCTACTGAGCCACCTACAGACAACCTTATGCATAGAACACCAGTTGGCCGAAGGGAACCTCTTATAACGAACATCATGTGGAGGAACTTACTCATTCAGGCTATGTATCAAGTTGCTGTCCTCCTTGTCCTCAACTTTCTGGGAACTAGCATTCTTGGTCTGCAAAATGAGACCCAGAAGCAGGCCACTAGTGTGAAGAATACTATCATATTTAATGCATTTGTCTTCTGCCAAATTTTTAACGAGTTCAATGCTCGAAAGCCTGAGGAAATAAATATCTTCAGTGGAGTGACTAAGAACTACCTCTTTATGGGAATAATAGGAATTACATTAGTACTTCAGATACTGATCATTATGTTCCTCGGAAAGTTTACAAAAACAGTGAGACTATCATGGCAGCAATGGCTTATATGCTTGGGTATTGCCATTGTCAGTTGGCCTCTTGCTGTTATTGGAAAACTAATTCCGGTCTCGAAGACACCATTGGGCGAGTACTTCAGTCGGCCAATTAAGCGATGCAGAAATTCTCGTAACTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0007338 GO:0008150 GO:0008324 GO:0009555 GO:0009566 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0019953 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1099

Amino Acids

119.58

Weight (kDa)

6.4

Isoelectric Point (pI)

36.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21180
fragaria_vesca	FvH4_6g37190 FvH4_6g37190 FvH4_6g37190 FvH4_6g37190
malus_domestica	MD09G1160300.v1.1 MD17G1146100.v1.1
prunus_persica	Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1
pyrus_communis	pycom09g07890 pycom17g13890
rosa_chinensis	RchiOBHm_Chr2g0149841
rosa_laevigata	RLG00000020450
rosa_multiflora	Rmu_ssc0000308.1_g000029
rosa_roxburghii	Rroxscaffold_2G00097600
rosa_rugosa	Rorug02G0417000
rosa_samantha	Rh2BG487700 Rh2CG461600 Rh2DG496500
rosa_wichuraiana	Rw2G038820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2822
AccI	GTMKAC	2 cut(s)	1471, 1787
AccII	CGCG	3 cut(s)	8, 96, 191
AciI	CCGC	7 cut(s)	6, 129, 132, 224, 613, 830, 2460
AclWI	GGATC	8 cut(s)	155, 309, 579, 592, 748, 1035, 2126, 2139
AcoI	YGGCCR	4 cut(s)	3, 1309, 2803, 3260
AcsI	RAATTY	6 cut(s)	820, 1270, 1964, 2612, 2991, 3280
AcuI	CTGAAG	8 cut(s)	744, 794, 1413, 2201, 2529, 3022, 3080, 3238
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	7 cut(s)	260, 1081, 1912, 2193, 2706, 3093, 3251
AfiI	CCNNNNNNNGG	5 cut(s)	79, 950, 1688, 2938, 3067
AflIII	ACRYGT	1 cut(s)	94
AhdI	GACNNNNNGTC	1 cut(s)	148
AhlI	ACTAGT	1 cut(s)	2945
AjiI	CACGTC	1 cut(s)	145
AjnI	CCWGG	2 cut(s)	452, 2143
AjuI	GAANNNNNNNTTGG	4 cut(s)	1554, 1586, 3224, 3256
AleI	CACNNNNGTG	2 cut(s)	1373, 2948
Alw21I	GWGCWC	2 cut(s)	375, 2749
Alw26I	GTCTC	8 cut(s)	101, 194, 1719, 2158, 2202, 2921, 3136, 3232
AlwI	GGATC	8 cut(s)	155, 309, 579, 592, 748, 1035, 2126, 2139
AlwNI	CAGNNNCTG	5 cut(s)	1226, 1391, 2180, 2713, 3103
Ama87I	CYCGRG	2 cut(s)	104, 197
AoxI	GGCC	8 cut(s)	3, 48, 100, 1309, 2803, 2940, 3194, 3260
ApeKI	GCWGC	9 cut(s)	134, 338, 677, 1886, 1976, 1994, 2645, 2669, 3154
ApoI	RAATTY	6 cut(s)	820, 1270, 1964, 2612, 2991, 3280
ArsI	GACNNNNNNTTYG	2 cut(s)	1522, 1554
AseI	ATTAAT	1 cut(s)	2658
AspLEI	GCGC	2 cut(s)	193, 1179
AspS9I	GGNCC	1 cut(s)	940
AsuHPI	GGTGA	6 cut(s)	425, 920, 1016, 1360, 1706, 2429
AsuNHI	GCTAGC	1 cut(s)	1423
AvaI	CYCGRG	2 cut(s)	104, 197
AvaII	GGWCC	1 cut(s)	940
AxyI	CCTNAGG	1 cut(s)	3021
BaeGI	GKGCMC	1 cut(s)	94
BalI	TGGCCA	1 cut(s)	1311
BamHI	GGATCC	2 cut(s)	584, 2131
BanII	GRGCYC	1 cut(s)	1499
BauI	CACGAG	2 cut(s)	230, 1906
BbsI	GAAGAC	4 cut(s)	18, 1040, 2974, 3239
Bbv12I	GWGCWC	2 cut(s)	375, 2749
BbvI	GCAGC	9 cut(s)	146, 350, 664, 1898, 1988, 2006, 2657, 2681, 3166
BceAI	ACGGC	4 cut(s)	52, 133, 1168, 1349
BcgI	CGANNNNNNTGC	2 cut(s)	2990, 3024
BciT130I	CCWGG	2 cut(s)	454, 2145
BciVI	GTATCC	1 cut(s)	2728
BclI	TGATCA	3 cut(s)	669, 2727, 3105
BcoDI	GTCTC	8 cut(s)	101, 194, 1719, 2158, 2202, 2921, 3136, 3232
BcuI	ACTAGT	1 cut(s)	2945
BfaI	CTAG	7 cut(s)	431, 993, 1317, 1424, 2741, 2904, 2946
BfmI	CTRYAG	6 cut(s)	476, 678, 1332, 1719, 1788, 2772
BfuI	GTATCC	1 cut(s)	2728
BglII	AGATCT	1 cut(s)	2366
BlpI	GCTNAGC	1 cut(s)	1498
BmcAI	AGTACT	2 cut(s)	3093, 3251
Bme1390I	CCNGG	2 cut(s)	454, 2145
Bme18I	GGWCC	1 cut(s)	940
BmeRI	GACNNNNNGTC	1 cut(s)	148
BmeT110I	CYCGRG	2 cut(s)	104, 197
BmgBI	CACGTC	1 cut(s)	145
BmgT120I	GGNCC	1 cut(s)	940
BmiI	GGNNCC	6 cut(s)	68, 586, 942, 1291, 2133, 2814
BmrFI	CCNGG	2 cut(s)	454, 2145
BmrI	ACTGGG	1 cut(s)	1536
BmsI	GCATC	6 cut(s)	1270, 1624, 2146, 2260, 2443, 3263
BmtI	GCTAGC	1 cut(s)	1427
BmuI	ACTGGG	1 cut(s)	1536
BpiI	GAAGAC	4 cut(s)	18, 1040, 2974, 3239
BpmI	CTGGAG	3 cut(s)	381, 872, 2226
Bpu1102I	GCTNAGC	1 cut(s)	1498
BpuEI	CTTGAG	1 cut(s)	191
BsaAI	YACGTR	1 cut(s)	2408
BsaBI	GATNNNNATC	1 cut(s)	3104
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	3 cut(s)	1719, 2921, 3232
BsaJI	CCNNGG	5 cut(s)	13, 264, 453, 599, 3118
BsaWI	WCCGGW	2 cut(s)	255, 3223
BsaXI	ACNNNNNCTCC	2 cut(s)	362, 392
Bsc4I	CCNNNNNNNGG	5 cut(s)	79, 950, 1688, 2938, 3067
Bse118I	RCCGGY	1 cut(s)	46
Bse21I	CCTNAGG	1 cut(s)	3021
Bse3DI	GCAATG	6 cut(s)	171, 509, 1359, 1647, 2019, 3164
Bse8I	GATNNNNATC	1 cut(s)	3104
BseBI	CCWGG	2 cut(s)	454, 2145
BseDI	CCNNGG	5 cut(s)	13, 264, 453, 599, 3118
BseGI	GGATG	7 cut(s)	312, 562, 734, 1615, 1764, 2202, 2551
BseJI	GATNNNNATC	1 cut(s)	3104
BseLI	CCNNNNNNNGG	5 cut(s)	79, 950, 1688, 2938, 3067
BseMI	GCAATG	6 cut(s)	171, 509, 1359, 1647, 2019, 3164
BseRI	GAGGAG	1 cut(s)	316
BseSI	GKGCMC	1 cut(s)	94
BseXI	GCAGC	9 cut(s)	146, 350, 664, 1898, 1988, 2006, 2657, 2681, 3166
BseYI	CCCAGC	1 cut(s)	2580
Bsh1236I	CGCG	3 cut(s)	8, 96, 191
BshFI	GGCC	8 cut(s)	5, 50, 102, 1311, 2805, 2942, 3196, 3262
BsiHKAI	GWGCWC	2 cut(s)	375, 2749
BsiHKCI	CYCGRG	2 cut(s)	104, 197
BsiSI	CCGG	3 cut(s)	47, 256, 3224
BslFI	GGGAC	4 cut(s)	926, 1543, 2598, 2675
BslI	CCNNNNNNNGG	5 cut(s)	79, 950, 1688, 2938, 3067
BsmAI	GTCTC	8 cut(s)	101, 194, 1719, 2158, 2202, 2921, 3136, 3232
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	4 cut(s)	926, 1543, 2598, 2675
BsmI	GAATGC	2 cut(s)	2496, 2907
BsnI	GGCC	8 cut(s)	5, 50, 102, 1311, 2805, 2942, 3196, 3262
Bso31I	GGTCTC	3 cut(s)	1719, 2921, 3232
BsoBI	CYCGRG	2 cut(s)	104, 197
Bsp1286I	GDGCHC	4 cut(s)	94, 375, 1499, 2749
Bsp1407I	TGTACA	1 cut(s)	2704
Bsp1720I	GCTNAGC	1 cut(s)	1498
Bsp19I	CCATGG	1 cut(s)	264
BspACI	CCGC	7 cut(s)	6, 129, 132, 224, 613, 830, 2460
BspANI	GGCC	8 cut(s)	5, 50, 102, 1311, 2805, 2942, 3196, 3262
BspFNI	CGCG	3 cut(s)	8, 96, 191
BspHI	TCATGA	2 cut(s)	858, 2467
BspLI	GGNNCC	6 cut(s)	68, 586, 942, 1291, 2133, 2814
BspMAI	CTGCAG	1 cut(s)	682
BspOI	GCTAGC	1 cut(s)	1427
BspPI	GGATC	8 cut(s)	155, 309, 579, 592, 748, 1035, 2126, 2139
BspQI	GCTCTTC	1 cut(s)	2058
BspTNI	GGTCTC	3 cut(s)	1719, 2921, 3232
BsrDI	GCAATG	6 cut(s)	171, 509, 1359, 1647, 2019, 3164
BsrFI	RCCGGY	1 cut(s)	46
BsrGI	TGTACA	1 cut(s)	2704
BssAI	RCCGGY	1 cut(s)	46
BssECI	CCNNGG	5 cut(s)	13, 264, 453, 599, 3118
BssNI	GRCGYC	1 cut(s)	126
BssSI	CACGAG	2 cut(s)	230, 1906
BssT1I	CCWWGG	1 cut(s)	264
Bst2BI	CACGAG	2 cut(s)	230, 1906
Bst2UI	CCWGG	2 cut(s)	454, 2145
Bst6I	CTCTTC	2 cut(s)	813, 2058
BstACI	GRCGYC	1 cut(s)	126
BstAUI	TGTACA	1 cut(s)	2704
BstBAI	YACGTR	1 cut(s)	2408
BstDSI	CCRYGG	2 cut(s)	13, 264
BstF5I	GGATG	7 cut(s)	312, 562, 734, 1615, 1764, 2202, 2551
BstFNI	CGCG	3 cut(s)	8, 96, 191
BstHHI	GCGC	2 cut(s)	193, 1179
BstMAI	GTCTC	8 cut(s)	101, 194, 1719, 2158, 2202, 2921, 3136, 3232
BstMWI	GCNNNNNNNGC	5 cut(s)	134, 1317, 1457, 3160, 3268
BstNI	CCWGG	2 cut(s)	454, 2145
BstSCI	CCNGG	2 cut(s)	452, 2143
BstSFI	CTRYAG	6 cut(s)	476, 678, 1332, 1719, 1788, 2772
BstSLI	GKGCMC	1 cut(s)	94
BstSNI	TACGTA	1 cut(s)	2408
BstUI	CGCG	3 cut(s)	8, 96, 191
BstV1I	GCAGC	9 cut(s)	146, 350, 664, 1898, 1988, 2006, 2657, 2681, 3166
BstV2I	GAAGAC	4 cut(s)	18, 1040, 2974, 3239
BstX2I	RGATCY	4 cut(s)	314, 584, 2131, 2366
BstYI	RGATCY	4 cut(s)	314, 584, 2131, 2366
Bsu36I	CCTNAGG	1 cut(s)	3021
BsuI	GTATCC	1 cut(s)	2728
BsuRI	GGCC	8 cut(s)	5, 50, 102, 1311, 2805, 2942, 3196, 3262
BtgI	CCRYGG	2 cut(s)	13, 264
BtgZI	GCGATG	2 cut(s)	2023, 3286
BtrI	CACGTC	1 cut(s)	145
BtsCI	GGATG	7 cut(s)	312, 562, 734, 1615, 1764, 2202, 2551
BtsI	GCAGTG	3 cut(s)	341, 687, 2166
CaiI	CAGNNNCTG	5 cut(s)	1226, 1391, 2180, 2713, 3103
CciI	TCATGA	2 cut(s)	858, 2467
CfoI	GCGC	2 cut(s)	193, 1179
Cfr10I	RCCGGY	1 cut(s)	46
Cfr13I	GGNCC	1 cut(s)	940
CseI	GACGC	4 cut(s)	85, 134, 211, 1429
Csp6I	GTAC	7 cut(s)	259, 1080, 1911, 2192, 2705, 3092, 3250
CviQI	GTAC	7 cut(s)	259, 1080, 1911, 2192, 2705, 3092, 3250
DraI	TTTAAA	1 cut(s)	825
DriI	GACNNNNNGTC	1 cut(s)	148
EaeI	YGGCCR	4 cut(s)	3, 1309, 2803, 3260
Eam1104I	CTCTTC	2 cut(s)	813, 2058
Eam1105I	GACNNNNNGTC	1 cut(s)	148
EarI	CTCTTC	2 cut(s)	813, 2058
EciI	GGCGGA	1 cut(s)	628
Eco105I	TACGTA	1 cut(s)	2408
Eco130I	CCWWGG	1 cut(s)	264
Eco24I	GRGCYC	1 cut(s)	1499
Eco31I	GGTCTC	3 cut(s)	1719, 2921, 3232
Eco32I	GATATC	2 cut(s)	2533, 2676
Eco47I	GGWCC	1 cut(s)	940
Eco57I	CTGAAG	8 cut(s)	744, 794, 1413, 2201, 2529, 3022, 3080, 3238
Eco81I	CCTNAGG	1 cut(s)	3021
Eco88I	CYCGRG	2 cut(s)	104, 197
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRII	CCWGG	2 cut(s)	452, 2143
EcoRV	GATATC	2 cut(s)	2533, 2676
EcoT14I	CCWWGG	1 cut(s)	264
EcoT22I	ATGCAT	2 cut(s)	2790, 2977
EcoT38I	GRGCYC	1 cut(s)	1499
ErhI	CCWWGG	1 cut(s)	264
Esp3I	CGTCTC	1 cut(s)	194
FalI	AAGNNNNNCTT	2 cut(s)	2085, 2117
FaqI	GGGAC	4 cut(s)	926, 1543, 2598, 2675
FauI	CCCGC	1 cut(s)	2467
FauNDI	CATATG	2 cut(s)	1567, 2035
FbaI	TGATCA	3 cut(s)	669, 2727, 3105
FblI	GTMKAC	2 cut(s)	1471, 1787
FokI	GGATG	7 cut(s)	319, 569, 741, 1602, 1771, 2209, 2558
FriOI	GRGCYC	1 cut(s)	1499
FspBI	CTAG	7 cut(s)	431, 993, 1317, 1424, 2741, 2904, 2946
GlaI	GCGC	2 cut(s)	192, 1178
GsaI	CCCAGC	1 cut(s)	2584
GsuI	CTGGAG	3 cut(s)	381, 872, 2226
HaeIII	GGCC	8 cut(s)	5, 50, 102, 1311, 2805, 2942, 3196, 3262
HapII	CCGG	3 cut(s)	47, 256, 3224
HgaI	GACGC	4 cut(s)	85, 134, 211, 1429
HhaI	GCGC	2 cut(s)	193, 1179
Hin1I	GRCGYC	1 cut(s)	126
Hin6I	GCGC	2 cut(s)	191, 1177
HinP1I	GCGC	2 cut(s)	191, 1177
HincII	GTYRAC	1 cut(s)	2722
HindII	GTYRAC	1 cut(s)	2722
HindIII	AAGCTT	1 cut(s)	639
HinfI	GANTC	8 cut(s)	252, 954, 989, 1104, 1601, 1784, 1856, 1925
HpaI	GTTAAC	1 cut(s)	2722
HpaII	CCGG	3 cut(s)	47, 256, 3224
HphI	GGTGA	6 cut(s)	425, 920, 1016, 1360, 1706, 2429
Hpy166II	GTNNAC	9 cut(s)	153, 261, 1021, 1356, 1472, 1788, 1911, 2722, 3129
Hpy8I	GTNNAC	9 cut(s)	153, 261, 1021, 1356, 1472, 1788, 1911, 2722, 3129
Hpy99I	CGWCG	7 cut(s)	25, 101, 122, 125, 128, 146, 252
HpyAV	CCTTC	6 cut(s)	175, 526, 719, 1388, 2288, 2802
HpyCH4IV	ACGT	4 cut(s)	144, 1671, 2407, 2587
HpyF10VI	GCNNNNNNNGC	5 cut(s)	134, 1317, 1457, 3160, 3268
HpySE526I	ACGT	4 cut(s)	144, 1671, 2407, 2587
Hsp92I	GRCGYC	1 cut(s)	126
HspAI	GCGC	2 cut(s)	191, 1177
KroI	GCCGGC	1 cut(s)	46
KroNI	GCCGGC	1 cut(s)	48
Ksp22I	TGATCA	3 cut(s)	669, 2727, 3105
KspAI	GTTAAC	1 cut(s)	2722
LguI	GCTCTTC	1 cut(s)	2058
LmnI	GCTCC	4 cut(s)	370, 1340, 2461, 2744
Lsp1109I	GCAGC	9 cut(s)	146, 350, 664, 1898, 1988, 2006, 2657, 2681, 3166
LweI	GCATC	6 cut(s)	1270, 1624, 2146, 2260, 2443, 3263
MaeI	CTAG	7 cut(s)	431, 993, 1317, 1424, 2741, 2904, 2946
MaeII	ACGT	4 cut(s)	144, 1671, 2407, 2587
MaeIII	GTNAC	8 cut(s)	778, 1090, 1366, 1411, 2200, 2431, 3046, 3287
MflI	RGATCY	4 cut(s)	314, 584, 2131, 2366
MhlI	GDGCHC	4 cut(s)	94, 375, 1499, 2749
MlsI	TGGCCA	1 cut(s)	1311
MluI	ACGCGT	1 cut(s)	94
MluNI	TGGCCA	1 cut(s)	1311
MlyI	GAGTC	3 cut(s)	1793, 1850, 1919
MmeI	TCCRAC	3 cut(s)	1081, 2078, 2650
Mox20I	TGGCCA	1 cut(s)	1311
Mph1103I	ATGCAT	2 cut(s)	2790, 2977
MroNI	GCCGGC	1 cut(s)	46
MscI	TGGCCA	1 cut(s)	1311
MslI	CAYNNNNRTG	3 cut(s)	1373, 2242, 2948
Msp20I	TGGCCA	1 cut(s)	1311
MspI	CCGG	3 cut(s)	47, 256, 3224
MspR9I	CCNGG	2 cut(s)	454, 2145
Mva1269I	GAATGC	2 cut(s)	2496, 2907
MvaI	CCWGG	2 cut(s)	454, 2145
MvnI	CGCG	3 cut(s)	8, 96, 191
MwoI	GCNNNNNNNGC	5 cut(s)	134, 1317, 1457, 3160, 3268
NaeI	GCCGGC	1 cut(s)	48
NcoI	CCATGG	1 cut(s)	264
NdeI	CATATG	2 cut(s)	1567, 2035
NgoMIV	GCCGGC	1 cut(s)	46
NheI	GCTAGC	1 cut(s)	1423
NlaIV	GGNNCC	6 cut(s)	68, 586, 942, 1291, 2133, 2814
NmuCI	GTSAC	3 cut(s)	1366, 2200, 3046
NsiI	ATGCAT	2 cut(s)	2790, 2977
OliI	CACNNNNGTG	2 cut(s)	1373, 2948
PaeR7I	CTCGAG	1 cut(s)	104
PagI	TCATGA	2 cut(s)	858, 2467
PciSI	GCTCTTC	1 cut(s)	2058
PcsI	WCGNNNNNNNCGW	3 cut(s)	29, 195, 2584
PctI	GAATGC	2 cut(s)	2496, 2907
PdiI	GCCGGC	1 cut(s)	48
PfeI	GAWTC	5 cut(s)	252, 954, 989, 1104, 1601
PleI	GAGTC	3 cut(s)	1792, 1850, 1919
PpsI	GAGTC	3 cut(s)	1792, 1850, 1919
Ppu21I	YACGTR	1 cut(s)	2408
PpuMI	RGGWCCY	1 cut(s)	940
PshBI	ATTAAT	1 cut(s)	2658
PsiI	TTATAA	1 cut(s)	2822
Psp5II	RGGWCCY	1 cut(s)	940
Psp6I	CCWGG	2 cut(s)	452, 2143
PspFI	CCCAGC	1 cut(s)	2580
PspGI	CCWGG	2 cut(s)	452, 2143
PspN4I	GGNNCC	6 cut(s)	68, 586, 942, 1291, 2133, 2814
PspPI	GGNCC	1 cut(s)	940
PspPPI	RGGWCCY	1 cut(s)	940
PsrI	GAACNNNNNNTAC	2 cut(s)	2559, 2591
PstI	CTGCAG	1 cut(s)	682
PstNI	CAGNNNCTG	5 cut(s)	1226, 1391, 2180, 2713, 3103
PsuI	RGATCY	4 cut(s)	314, 584, 2131, 2366
RsaI	GTAC	7 cut(s)	260, 1081, 1912, 2193, 2706, 3093, 3251
RsaNI	GTAC	7 cut(s)	259, 1080, 1911, 2192, 2705, 3092, 3250
RseI	CAYNNNNRTG	3 cut(s)	1373, 2242, 2948
SapI	GCTCTTC	1 cut(s)	2058
Sau96I	GGNCC	1 cut(s)	940
ScaI	AGTACT	2 cut(s)	3093, 3251
SchI	GAGTC	3 cut(s)	1793, 1850, 1919
ScrFI	CCNGG	2 cut(s)	454, 2145
SduI	GDGCHC	4 cut(s)	94, 375, 1499, 2749
SfaNI	GCATC	6 cut(s)	1270, 1624, 2146, 2260, 2443, 3263
SfcI	CTRYAG	6 cut(s)	476, 678, 1332, 1719, 1788, 2772
Sfr274I	CTCGAG	1 cut(s)	104
SinI	GGWCC	1 cut(s)	940
SlaI	CTCGAG	1 cut(s)	104
SmiI	ATTTAAAT	1 cut(s)	825
SmiMI	CAYNNNNRTG	3 cut(s)	1373, 2242, 2948
SmlI	CTYRAG	2 cut(s)	104, 206
SmoI	CTYRAG	2 cut(s)	104, 206
SnaBI	TACGTA	1 cut(s)	2408
SpeI	ACTAGT	1 cut(s)	2945
SsiI	CCGC	7 cut(s)	6, 129, 132, 224, 613, 830, 2460
SspI	AATATT	2 cut(s)	1948, 2605
SspMI	CTAG	7 cut(s)	431, 993, 1317, 1424, 2741, 2904, 2946
StyD4I	CCNGG	2 cut(s)	452, 2143
StyI	CCWWGG	1 cut(s)	264
SwaI	ATTTAAAT	1 cut(s)	825
TaiI	ACGT	4 cut(s)	147, 1674, 2410, 2590
TaqI	TCGA	8 cut(s)	105, 117, 168, 887, 1433, 2265, 3013, 3230
TatI	WGTACW	3 cut(s)	2704, 3091, 3249
TauI	GCSGC	4 cut(s)	8, 131, 134, 227
TfiI	GAWTC	5 cut(s)	252, 954, 989, 1104, 1601
TseFI	GTSAC	3 cut(s)	1366, 2200, 3046
TseI	GCWGC	9 cut(s)	134, 338, 677, 1886, 1976, 1994, 2645, 2669, 3154
Tsp45I	GTSAC	3 cut(s)	1366, 2200, 3046
TspDTI	ATGAA	9 cut(s)	435, 1002, 1451, 1728, 1775, 1787, 1856, 2052, 2456
TspGWI	ACGGA	3 cut(s)	1928, 2209, 2297
VpaK11BI	GGWCC	1 cut(s)	940
VspI	ATTAAT	1 cut(s)	2658
XapI	RAATTY	6 cut(s)	820, 1270, 1964, 2612, 2991, 3280
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1304, 1319
XhoI	CTCGAG	1 cut(s)	104
XmiI	GTMKAC	2 cut(s)	1471, 1787
XspI	CTAG	7 cut(s)	431, 993, 1317, 1424, 2741, 2904, 2946
ZrmI	AGTACT	2 cut(s)	3093, 3251
Zsp2I	ATGCAT	2 cut(s)	2790, 2977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.