Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0008228

Physical Location & Seq

Genomic Coordinates Reverse (-)

6010216 .. 6016160

Gene Structure 5945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g07890.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGTCAGGTTGCAAAGTGGCTGATGGAGTGGGTACTATGCTGGTAACTGGTGTTGGAATCAATACTGAATGGGGGTTATTGATGGCGAGCATCTCAGAGGATACTGGTGAAGAAACGCCTTTGCAGGTGCGGTTGAATGGAGTTGCAACTTTTATAGGCATAGTTGGGCTTTCAGTGGCTGCTTTGGTGCTAGCCGTCCTTTGGGGCAGATACTTTACCGGAAACACAAAAGATCTATATGGAAACGTACAGTTTAAAGCTGGTCAGACTAGCATTAGCAAAACTTTTGATGGAGCAGTGAAAATTTTCACCATTGCTGTCACCATTGTGGTTGTTGCAGTGCCTGAAGGGCTACCATTGGCCGTTACCTTGACGCTAGCATACTCAATGAAGAAAATGATGGCAGATAAGGCATTGGTGCGTAGACTGTCAGCGTGTGAAACTATGGGCTCAGCAACAACAATTTGCAGTGATAAAACTGGGACATTGACTTTAAATCAGATGACTGTGGTTGAGGCATATGTTGGGAGAAAAAAGATAAATCCGCCAGATGATACCTCACAGTTGCATCCGCTGGTTTCCACTCTCCTAAGTGAGGGCGTTGCGCAGAATACCACTGGCAACGTATTTGAGCCAACGGGTGGTGAAGTCGAGATTTCTGGATCTCCTACGGAAAAGGCTATACTTTCATGGGCATTCAAGTTGGGGATGAAGTTTGATGCTATCAGATTGGAGTCTACAGTCCTTCATGTTTTCCCTTTCAACTCGGAGAAAAAGCGAGGTGGTGTTGCACTAAAACAGGCTGACTCTAAAGTTCATATACATTGGAAAGGAGCAGCGGAGATAGTTTTAGCCTCGTGCACAGAATATCTTGACTCAGATGGTTGCTCGCAGAATATTGAAGATGACAAGGAGTTTTTCAAGACGGCTATTGATGACATGGCAGAACGCAGTTTGCGGTGTGTTGCCATTGCATACAGACCATATGAATTGGACAAAGTTCCTACTGATGAAGAGCAATTAAGTCAATGGGCTTTACCAGAAGATGACCTTGTCCTGCTTGCTATTGTTGGTATAAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCAGTGAAACTATGCACTGAAGCTGGTGTTAAGGTACGCATGGTCACTGGAGACAATCTTCAAACAGCAAAAGCCATCGCGTTAGAGTGTGGAATACTACCTTCACTCAAAGATGCAACTGAGCCTACAATAATCGAAGGAAAAACATTCCGTGAATTGTCTGAAAGGGAAAGGGAACAAACCGCCAAGAAAATAACAGTAATGGGCAGATCTTCCCCTAATGACAAGTTGTTGCTTGTGCAAGCATTACGTAAGGGGGGTGAAGTTGTTGCAGTAACAGGAGATGGCACTAATGATGCTCCGGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTCAAGGAACTGAAGTTGCAAAAGAAAGTTCGGATATCGTTATCTTGGATGACAATTTTGCCTCTGTTGTAAAGGTTGTCCGCTGGGGACGTTCTGTGTATGCAAATATTCAGAAATTTATCCAATTTCAACTTACTGTTAATGTTGCCGCTCTTGTAATTAATGTTGTGGCCGCAATCTCTTCTGGTAGTGTTCCGTTAAATGCAGTACAGCTTCTGTGGGTTAACTTGATCATGGATACTCTAGGAGCACTTGCATTGGCTACCGAACCACCTACAGACAACCTTATGCAGAGAACACCACAGGATGACCACAAGCATGCCATTGGTGTGAAGAATACTCTCATATTCAATGCATTCGTCTTTTGCCAAATTTTCAATGAGTTCAATGCTCGAAAACCTGAAGAAATAAATGTGTTCCGCGGAGTGACCAAAAACTACCTCTTCATGGGAATAATAGGAATTACATTGGTACTTCAGATAATCATCGTTATGTTCCTCGGAAAATTTACAAAAACAGTGAGGCTATCATGGCAGCAATGGCTCATATGCTTGGGAATTGCCATTGTCAGTTGGCCTCTTGCTGTTATTGGAAAACTAATTCCGGTCCCAAAGACTCCGTTTTCCCAGTACTTCAGTCGCCCTATTCAGCGGTGCAGAAATTCTCGTAATCGTAATACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0007338 GO:0008150 GO:0008324 GO:0009555 GO:0009566 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0019953 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

710

Amino Acids

77.07

Weight (kDa)

6.46

Isoelectric Point (pI)

31.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21180
fragaria_vesca	FvH4_6g37190 FvH4_6g37190 FvH4_6g37190 FvH4_6g37190
malus_domestica	MD09G1160300.v1.1 MD17G1146100.v1.1
prunus_persica	Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1 Prupe.3G018900_v2.0.a1
pyrus_communis	pycom09g07890 pycom17g13890
rosa_chinensis	RchiOBHm_Chr2g0149841
rosa_laevigata	RLG00000020450
rosa_multiflora	Rmu_ssc0000308.1_g000029
rosa_roxburghii	Rroxscaffold_2G00097600
rosa_rugosa	Rorug02G0417000
rosa_samantha	Rh2BG487700 Rh2CG461600 Rh2DG496500
rosa_wichuraiana	Rw2G038820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	115
Acc16I	TGCGCA	1 cut(s)	606
Acc36I	ACCTGC	1 cut(s)	115
AccB7I	CCANNNNNTGG	1 cut(s)	641
AccBSI	CCGCTC	1 cut(s)	1598
AccI	GTMKAC	2 cut(s)	424, 737
AccII	CGCG	2 cut(s)	1187, 1869
AclWI	GGATC	3 cut(s)	670, 1076, 1089
AcoI	YGGCCR	2 cut(s)	360, 1617
AcsI	RAATTY	5 cut(s)	303, 1562, 1818, 1952, 2107
AcuI	CTGAAG	6 cut(s)	366, 1146, 1479, 1869, 1907, 2065
AfaI	GTAC	6 cut(s)	34, 249, 1143, 1656, 1920, 2078
AfiI	CCNNNNNNNGG	4 cut(s)	201, 595, 641, 1894
AjnI	CCWGG	1 cut(s)	1093
AleI	CACNNNNGTG	1 cut(s)	326
AluBI	AGCT	3 cut(s)	260, 1130, 1660
AluI	AGCT	3 cut(s)	260, 1130, 1660
Alw21I	GWGCWC	2 cut(s)	863, 1699
Alw26I	GTCTC	1 cut(s)	1152
Alw44I	GTGCAC	1 cut(s)	859
AlwI	GGATC	3 cut(s)	670, 1076, 1089
AlwNI	CAGNNNCTG	3 cut(s)	179, 344, 1663
AoxI	GGCC	3 cut(s)	360, 1617, 2021
ApaLI	GTGCAC	1 cut(s)	859
ApeKI	GCWGC	3 cut(s)	179, 836, 1981
ApoI	RAATTY	5 cut(s)	303, 1562, 1818, 1952, 2107
AseI	ATTAAT	1 cut(s)	1608
Asp700I	GAANNNNTTC	1 cut(s)	305
AspLEI	GCGC	1 cut(s)	607
AspS9I	GGNCC	1 cut(s)	2053
AsuHPI	GGTGA	5 cut(s)	119, 301, 313, 656, 1379
AsuNHI	GCTAGC	2 cut(s)	190, 376
AvaII	GGWCC	1 cut(s)	2053
BaeGI	GKGCMC	1 cut(s)	863
BamHI	GGATCC	1 cut(s)	1081
BanII	GRGCYC	1 cut(s)	452
BauI	CACGAG	1 cut(s)	856
Bbv12I	GWGCWC	2 cut(s)	863, 1699
BbvI	GCAGC	3 cut(s)	166, 848, 1993
BccI	CCATC	7 cut(s)	17, 76, 284, 394, 875, 1190, 1385
BceAI	ACGGC	3 cut(s)	179, 347, 942
BciT130I	CCWGG	1 cut(s)	1095
BciVI	GTATCC	2 cut(s)	94, 1678
BclI	TGATCA	1 cut(s)	1677
BcoDI	GTCTC	1 cut(s)	1152
BfaI	CTAG	4 cut(s)	191, 270, 377, 1691
BfmI	CTRYAG	2 cut(s)	738, 1722
BfuAI	ACCTGC	1 cut(s)	115
BfuI	GTATCC	2 cut(s)	94, 1678
BglI	GCCNNNNNGGC	1 cut(s)	349
BglII	AGATCT	2 cut(s)	232, 1316
BisI	GCNGC	5 cut(s)	180, 837, 1596, 1620, 1982
BlpI	GCTNAGC	1 cut(s)	451
BlsI	GCNGC	5 cut(s)	181, 838, 1597, 1621, 1983
BmcAI	AGTACT	1 cut(s)	2078
Bme1390I	CCNGG	1 cut(s)	1095
Bme18I	GGWCC	1 cut(s)	2053
BmgT120I	GGNCC	1 cut(s)	2053
BmiI	GGNNCC	2 cut(s)	1083, 2055
BmrFI	CCNGG	1 cut(s)	1095
BmrI	ACTGGG	2 cut(s)	489, 2068
BmsI	GCATC	6 cut(s)	99, 577, 709, 1096, 1210, 1393
BmtI	GCTAGC	2 cut(s)	194, 380
BmuI	ACTGGG	2 cut(s)	489, 2068
BpmI	CTGGAG	1 cut(s)	1176
Bpu1102I	GCTNAGC	1 cut(s)	451
BsaAI	YACGTR	1 cut(s)	1358
BsaBI	GATNNNNATC	1 cut(s)	1931
BsaJI	CCNNGG	3 cut(s)	1093, 1867, 1945
BsaWI	WCCGGW	2 cut(s)	218, 2050
Bsc4I	CCNNNNNNNGG	4 cut(s)	201, 595, 641, 1894
Bse1I	ACTGG	6 cut(s)	52, 109, 484, 622, 1159, 2074
Bse3DI	GCAATG	3 cut(s)	312, 969, 1991
Bse8I	GATNNNNATC	1 cut(s)	1931
BseBI	CCWGG	1 cut(s)	1095
BseDI	CCNNGG	3 cut(s)	1093, 1867, 1945
BseGI	GGATG	4 cut(s)	568, 714, 1501, 1759
BseJI	GATNNNNATC	1 cut(s)	1931
BseLI	CCNNNNNNNGG	4 cut(s)	201, 595, 641, 1894
BseMI	GCAATG	3 cut(s)	312, 969, 1991
BseMII	CTCAG	4 cut(s)	108, 465, 891, 1218
BseNI	ACTGG	6 cut(s)	52, 109, 484, 622, 1159, 2074
BseSI	GKGCMC	1 cut(s)	863
BseXI	GCAGC	3 cut(s)	166, 848, 1993
BseYI	CCCAGC	1 cut(s)	1530
BsgI	GTGCAG	1 cut(s)	2122
Bsh1236I	CGCG	2 cut(s)	1187, 1869
BshFI	GGCC	3 cut(s)	362, 1619, 2023
BsiHKAI	GWGCWC	2 cut(s)	863, 1699
BsiSI	CCGG	3 cut(s)	219, 1409, 2051
BslFI	GGGAC	3 cut(s)	496, 1548, 2039
BslI	CCNNNNNNNGG	4 cut(s)	201, 595, 641, 1894
BsmAI	GTCTC	1 cut(s)	1152
BsmFI	GGGAC	3 cut(s)	496, 1548, 2039
BsmI	GAATGC	3 cut(s)	695, 1446, 1802
BsnI	GGCC	3 cut(s)	362, 1619, 2023
Bsp1286I	GDGCHC	3 cut(s)	452, 863, 1699
Bsp143I	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
Bsp1720I	GCTNAGC	1 cut(s)	451
BspANI	GGCC	3 cut(s)	362, 1619, 2023
BspCNI	CTCAG	4 cut(s)	107, 464, 890, 1219
BspFNI	CGCG	2 cut(s)	1187, 1869
BspHI	TCATGA	1 cut(s)	1417
BspLI	GGNNCC	2 cut(s)	1083, 2055
BspMI	ACCTGC	1 cut(s)	115
BspOI	GCTAGC	2 cut(s)	194, 380
BspPI	GGATC	3 cut(s)	670, 1076, 1089
BspQI	GCTCTTC	1 cut(s)	1008
BsrBI	CCGCTC	1 cut(s)	1598
BsrDI	GCAATG	3 cut(s)	312, 969, 1991
BsrI	ACTGG	6 cut(s)	52, 109, 484, 622, 1159, 2074
BssECI	CCNNGG	3 cut(s)	1093, 1867, 1945
BssMI	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
BssSI	CACGAG	1 cut(s)	856
Bst2BI	CACGAG	1 cut(s)	856
Bst2UI	CCWGG	1 cut(s)	1095
Bst4CI	ACNGT	8 cut(s)	252, 429, 508, 564, 742, 1306, 1585, 1966
Bst6I	CTCTTC	3 cut(s)	1008, 1633, 1895
BstBAI	YACGTR	1 cut(s)	1358
BstC8I	GCNNGC	7 cut(s)	88, 192, 378, 890, 1062, 1350, 1767
BstDEI	CTNAG	5 cut(s)	94, 451, 590, 877, 1227
BstDSI	CCRYGG	1 cut(s)	1867
BstENI	CCTNNNNNAGG	1 cut(s)	593
BstF5I	GGATG	4 cut(s)	568, 714, 1501, 1759
BstFNI	CGCG	2 cut(s)	1187, 1869
BstHHI	GCGC	1 cut(s)	607
BstKTI	GATC	5 cut(s)	235, 665, 1084, 1319, 1680
BstMAI	GTCTC	1 cut(s)	1152
BstMBI	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
BstMWI	GCNNNNNNNGC	4 cut(s)	349, 410, 1978, 1987
BstNI	CCWGG	1 cut(s)	1095
BstNSI	RCATGY	1 cut(s)	1769
BstSCI	CCNGG	1 cut(s)	1093
BstSFI	CTRYAG	2 cut(s)	738, 1722
BstSLI	GKGCMC	1 cut(s)	863
BstSNI	TACGTA	1 cut(s)	1358
BstUI	CGCG	2 cut(s)	1187, 1869
BstV1I	GCAGC	3 cut(s)	166, 848, 1993
BstX2I	RGATCY	4 cut(s)	232, 662, 1081, 1316
BstYI	RGATCY	4 cut(s)	232, 662, 1081, 1316
BsuI	GTATCC	2 cut(s)	94, 1678
BsuRI	GGCC	3 cut(s)	362, 1619, 2023
BtgI	CCRYGG	1 cut(s)	1867
BtgZI	GCGATG	1 cut(s)	1168
BtsCI	GGATG	4 cut(s)	568, 714, 1501, 1759
BtsI	GCAGTG	4 cut(s)	303, 345, 475, 1116
BtsIMutI	CAGTG	9 cut(s)	180, 303, 345, 475, 615, 1116, 1122, 1152, 1971
BveI	ACCTGC	1 cut(s)	115
Cac8I	GCNNGC	7 cut(s)	88, 192, 378, 890, 1062, 1350, 1767
CaiI	CAGNNNCTG	3 cut(s)	179, 344, 1663
CciI	TCATGA	1 cut(s)	1417
CfoI	GCGC	1 cut(s)	607
Cfr13I	GGNCC	1 cut(s)	2053
Cfr42I	CCGCGG	1 cut(s)	1870
CseI	GACGC	1 cut(s)	382
Csp6I	GTAC	6 cut(s)	33, 248, 1142, 1655, 1919, 2077
CviAII	CATG	9 cut(s)	690, 749, 940, 1147, 1418, 1681, 1766, 1894, 1977
CviQI	GTAC	6 cut(s)	33, 248, 1142, 1655, 1919, 2077
DdeI	CTNAG	5 cut(s)	94, 451, 590, 877, 1227
DpnI	GATC	5 cut(s)	234, 664, 1083, 1318, 1679
DpnII	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
DraI	TTTAAA	2 cut(s)	256, 495
EaeI	YGGCCR	2 cut(s)	360, 1617
Eam1104I	CTCTTC	3 cut(s)	1008, 1633, 1895
EarI	CTCTTC	3 cut(s)	1008, 1633, 1895
EciI	GGCGGA	1 cut(s)	534
Eco105I	TACGTA	1 cut(s)	1358
Eco24I	GRGCYC	1 cut(s)	452
Eco32I	GATATC	1 cut(s)	1483
Eco47I	GGWCC	1 cut(s)	2053
Eco57I	CTGAAG	6 cut(s)	366, 1146, 1479, 1869, 1907, 2065
EcoNI	CCTNNNNNAGG	1 cut(s)	593
EcoRII	CCWGG	1 cut(s)	1093
EcoRV	GATATC	1 cut(s)	1483
EcoT22I	ATGCAT	1 cut(s)	1804
EcoT38I	GRGCYC	1 cut(s)	452
FaeI	CATG	9 cut(s)	693, 752, 943, 1150, 1421, 1684, 1769, 1897, 1980
FalI	AAGNNNNNCTT	2 cut(s)	1035, 1067
FaqI	GGGAC	3 cut(s)	496, 1548, 2039
FatI	CATG	9 cut(s)	689, 748, 939, 1146, 1417, 1680, 1765, 1893, 1976
FauNDI	CATATG	3 cut(s)	520, 985, 1994
FbaI	TGATCA	1 cut(s)	1677
FblI	GTMKAC	2 cut(s)	424, 737
Fnu4HI	GCNGC	5 cut(s)	180, 837, 1596, 1620, 1982
FokI	GGATG	4 cut(s)	555, 721, 1508, 1766
FriOI	GRGCYC	1 cut(s)	452
Fsp4HI	GCNGC	5 cut(s)	180, 837, 1596, 1620, 1982
FspBI	CTAG	4 cut(s)	191, 270, 377, 1691
FspI	TGCGCA	1 cut(s)	606
GlaI	GCGC	1 cut(s)	606
GluI	GCNGC	5 cut(s)	180, 837, 1596, 1620, 1982
GsaI	CCCAGC	1 cut(s)	1534
GsuI	CTGGAG	1 cut(s)	1176
HaeIII	GGCC	3 cut(s)	362, 1619, 2023
HapII	CCGG	3 cut(s)	219, 1409, 2051
HgaI	GACGC	1 cut(s)	382
HhaI	GCGC	1 cut(s)	607
Hin1II	CATG	9 cut(s)	693, 752, 943, 1150, 1421, 1684, 1769, 1897, 1980
Hin6I	GCGC	1 cut(s)	605
HinP1I	GCGC	1 cut(s)	605
HincII	GTYRAC	1 cut(s)	1672
HindII	GTYRAC	1 cut(s)	1672
HinfI	GANTC	5 cut(s)	57, 734, 806, 875, 2062
HpaI	GTTAAC	1 cut(s)	1672
HpaII	CCGG	3 cut(s)	219, 1409, 2051
HphI	GGTGA	5 cut(s)	119, 301, 313, 656, 1379
Hpy166II	GTNNAC	4 cut(s)	425, 738, 861, 1672
Hpy188III	TCNNGA	5 cut(s)	652, 660, 872, 922, 1418
Hpy8I	GTNNAC	4 cut(s)	425, 738, 861, 1672
HpyAV	CCTTC	4 cut(s)	341, 755, 1218, 1238
HpyCH4III	ACNGT	8 cut(s)	252, 429, 508, 564, 742, 1306, 1585, 1966
HpyCH4IV	ACGT	4 cut(s)	246, 624, 1357, 1537
HpyF10VI	GCNNNNNNNGC	4 cut(s)	349, 410, 1978, 1987
HpyF3I	CTNAG	5 cut(s)	94, 451, 590, 877, 1227
HpySE526I	ACGT	4 cut(s)	246, 624, 1357, 1537
Hsp92II	CATG	9 cut(s)	693, 752, 943, 1150, 1421, 1684, 1769, 1897, 1980
HspAI	GCGC	1 cut(s)	605
Ksp22I	TGATCA	1 cut(s)	1677
KspAI	GTTAAC	1 cut(s)	1672
KspI	CCGCGG	1 cut(s)	1870
Kzo9I	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
LguI	GCTCTTC	1 cut(s)	1008
LmnI	GCTCC	4 cut(s)	293, 833, 1411, 1694
Lsp1109I	GCAGC	3 cut(s)	166, 848, 1993
LweI	GCATC	6 cut(s)	99, 577, 709, 1096, 1210, 1393
MaeI	CTAG	4 cut(s)	191, 270, 377, 1691
MaeII	ACGT	4 cut(s)	246, 624, 1357, 1537
MaeIII	GTNAC	6 cut(s)	43, 319, 364, 1150, 1381, 1873
MalI	GATC	5 cut(s)	234, 664, 1083, 1318, 1679
MbiI	CCGCTC	1 cut(s)	1598
MboI	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
MflI	RGATCY	4 cut(s)	232, 662, 1081, 1316
MhlI	GDGCHC	3 cut(s)	452, 863, 1699
MlyI	GAGTC	4 cut(s)	743, 800, 869, 2056
MmeI	TCCRAC	1 cut(s)	34
Mph1103I	ATGCAT	1 cut(s)	1804
MroXI	GAANNNNTTC	1 cut(s)	305
MseI	TTAA	8 cut(s)	255, 494, 1022, 1137, 1587, 1608, 1646, 1671
MslI	CAYNNNNRTG	4 cut(s)	326, 1764, 1775, 1937
MspA1I	CMGCKG	5 cut(s)	574, 839, 1530, 1869, 2098
MspI	CCGG	3 cut(s)	219, 1409, 2051
MspR9I	CCNGG	1 cut(s)	1095
Mva1269I	GAATGC	3 cut(s)	695, 1446, 1802
MvaI	CCWGG	1 cut(s)	1095
MvnI	CGCG	2 cut(s)	1187, 1869
MwoI	GCNNNNNNNGC	4 cut(s)	349, 410, 1978, 1987
NdeI	CATATG	3 cut(s)	520, 985, 1994
NdeII	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
NheI	GCTAGC	2 cut(s)	190, 376
NlaIII	CATG	9 cut(s)	693, 752, 943, 1150, 1421, 1684, 1769, 1897, 1980
NlaIV	GGNNCC	2 cut(s)	1083, 2055
NmuCI	GTSAC	3 cut(s)	319, 1150, 1873
NsbI	TGCGCA	1 cut(s)	606
NsiI	ATGCAT	1 cut(s)	1804
NspI	RCATGY	1 cut(s)	1769
OliI	CACNNNNGTG	1 cut(s)	326
PaeI	GCATGC	1 cut(s)	1769
PagI	TCATGA	1 cut(s)	1417
PaqCI	CACCTGC	1 cut(s)	115
PciSI	GCTCTTC	1 cut(s)	1008
PctI	GAATGC	3 cut(s)	695, 1446, 1802
PdmI	GAANNNNTTC	1 cut(s)	305
PfeI	GAWTC	1 cut(s)	57
PflFI	GACNNNGTC	1 cut(s)	1052
PflMI	CCANNNNNTGG	1 cut(s)	641
PkrI	GCNGC	5 cut(s)	181, 838, 1597, 1621, 1983
PleI	GAGTC	4 cut(s)	742, 800, 869, 2056
PpsI	GAGTC	4 cut(s)	742, 800, 869, 2056
Ppu21I	YACGTR	1 cut(s)	1358
PshBI	ATTAAT	1 cut(s)	1608
Psp6I	CCWGG	1 cut(s)	1093
PspFI	CCCAGC	1 cut(s)	1530
PspGI	CCWGG	1 cut(s)	1093
PspN4I	GGNNCC	2 cut(s)	1083, 2055
PspPI	GGNCC	1 cut(s)	2053
PstNI	CAGNNNCTG	3 cut(s)	179, 344, 1663
PsuI	RGATCY	4 cut(s)	232, 662, 1081, 1316
PsyI	GACNNNGTC	1 cut(s)	1052
RsaI	GTAC	6 cut(s)	34, 249, 1143, 1656, 1920, 2078
RsaNI	GTAC	6 cut(s)	33, 248, 1142, 1655, 1919, 2077
RseI	CAYNNNNRTG	4 cut(s)	326, 1764, 1775, 1937
SacII	CCGCGG	1 cut(s)	1870
SapI	GCTCTTC	1 cut(s)	1008
SaqAI	TTAA	8 cut(s)	255, 494, 1022, 1137, 1587, 1608, 1646, 1671
SatI	GCNGC	5 cut(s)	180, 837, 1596, 1620, 1982
Sau3AI	GATC	5 cut(s)	232, 662, 1081, 1316, 1677
Sau96I	GGNCC	1 cut(s)	2053
ScaI	AGTACT	1 cut(s)	2078
SchI	GAGTC	4 cut(s)	743, 800, 869, 2056
ScrFI	CCNGG	1 cut(s)	1095
SduI	GDGCHC	3 cut(s)	452, 863, 1699
SfaNI	GCATC	6 cut(s)	99, 577, 709, 1096, 1210, 1393
SfcI	CTRYAG	2 cut(s)	738, 1722
Sfr303I	CCGCGG	1 cut(s)	1870
SgrBI	CCGCGG	1 cut(s)	1870
SinI	GGWCC	1 cut(s)	2053
SmiMI	CAYNNNNRTG	4 cut(s)	326, 1764, 1775, 1937
SnaBI	TACGTA	1 cut(s)	1358
SphI	GCATGC	1 cut(s)	1769
SspI	AATATT	2 cut(s)	898, 1555
SspMI	CTAG	4 cut(s)	191, 270, 377, 1691
StyD4I	CCNGG	1 cut(s)	1093
TaaI	ACNGT	8 cut(s)	252, 429, 508, 564, 742, 1306, 1585, 1966
TaiI	ACGT	4 cut(s)	249, 627, 1360, 1540
TaqI	TCGA	3 cut(s)	651, 1242, 1840
TatI	WGTACW	2 cut(s)	1654, 2076
TauI	GCSGC	2 cut(s)	1598, 1622
TfiI	GAWTC	1 cut(s)	57
Tru1I	TTAA	8 cut(s)	255, 494, 1022, 1137, 1587, 1608, 1646, 1671
Tru9I	TTAA	8 cut(s)	255, 494, 1022, 1137, 1587, 1608, 1646, 1671
TscAI	CASTG	9 cut(s)	180, 303, 345, 475, 622, 1116, 1129, 1159, 1971
TseFI	GTSAC	3 cut(s)	319, 1150, 1873
TseI	GCWGC	3 cut(s)	179, 836, 1981
Tsp45I	GTSAC	3 cut(s)	319, 1150, 1873
TspDTI	ATGAA	9 cut(s)	404, 678, 725, 737, 806, 1002, 1026, 1406, 1882
TspGWI	ACGGA	4 cut(s)	686, 1247, 1632, 2055
TspRI	CASTG	9 cut(s)	180, 303, 345, 475, 622, 1116, 1129, 1159, 1971
Tth111I	GACNNNGTC	1 cut(s)	1052
Van91I	CCANNNNNTGG	1 cut(s)	641
VneI	GTGCAC	1 cut(s)	859
VpaK11BI	GGWCC	1 cut(s)	2053
VspI	ATTAAT	1 cut(s)	1608
XagI	CCTNNNNNAGG	1 cut(s)	593
XapI	RAATTY	5 cut(s)	303, 1562, 1818, 1952, 2107
XceI	RCATGY	1 cut(s)	1769
XmiI	GTMKAC	2 cut(s)	424, 737
XmnI	GAANNNNTTC	1 cut(s)	305
XspI	CTAG	4 cut(s)	191, 270, 377, 1691
ZrmI	AGTACT	1 cut(s)	2078
Zsp2I	ATGCAT	1 cut(s)	1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.