AT3G22120
ERF Family

Bifunctional inhibitor lipid-transfer protein seed storage 2S albumin superfamily protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
7794758 .. 7796460
1703 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G22120.1

Sequence Viewer

Length: 1005 bp
ATGGGGTCTCGCTCTCAAAACCTCTCCTTTCTCGTCCTCCTCCTCCTTGGCTTCGTTGCCGTCTCCTATGCTTGCGACTGTACCCCTCCTAAACCATCACCAGCACCTCACAAACCACCAAAACATCCAGTCAAACCGCCTAAACCTCCTGCCGTCAAACCACCTAAACCACCGGCAGTAAAACCACCTACTCCAAAACCTCCCACCGTGAAACCCCATCCTAAACCACCAACCGTCAAACCCCATCCTAAACCACCAACCGTCAAACCCCACCCTAAGCCACCCACCGTCAAACCACCCCACCCTAAACCACCCACCAAACCTCACCCCCACCCAAAACCTCCCATCGTAAAGCCACCAACCAAGCCTCCTCCGTCCACCCCTAAACCTCCCACCAAACCTCCCCCGTCCACACCTAAACCTCCCACGACCAAGCCTCCTCCGTCTACTCCGAAACCACCCCACCACAAGCCTCCGCCTACACCATGCCCACCACCAACACCAACGCCGACTCCACCAGTTGTAACACCGCCAACACCAACCCCACCCGTCATAACTCCACCAACACCAACCCCACCCGTCGTAACACCGCCAACGCCAACTCCACCCGTCATTACACCACCAACACCAACTCCACCCGTCATTACACCACCAACACCAACACCACCCGTCGTGACACCTCCAACACCAACACCACCCGTAGTAACACCACCAACACCAACTCCTCCTACGCCTATTCCAGAGACTTGCCCAATTGACACGCTGAAGCTAGGCGCTTGTGTGGACGTTCTTGGAGGTTTGATTCACATCGGACTTGGAAAAAGCCACGCCAAGGCAGAATGTTGTCCGGTTTTAGGAGGTTTACTTGACCTAGACGCAGCCGTTTGTCTATGTACCACCATTAAGCTCAAACTTCTCAACATCGACCTTGTTCTCCCCATTGCTCTTGAGCTTCTTCTCGACTGTGGAAAAACTCCACCATCTGACTTCAAATGTCCCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

334

Amino Acids

34.67

Weight (kDa)

9.8

Isoelectric Point (pI)

53.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrophob_seed PF14547 249 - 333 8.7e-26 Hydrophobic seed protein
Tryp_alpha_amyl PF00234 250 - 332 3.5e-11 Protease inhibitor/seed storage/LTP family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014897)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 446
AciI CCGC 5 cut(s) 137, 476, 530, 590, 999
AcuI CTGAAG 1 cut(s) 785
AfaI GTAC 2 cut(s) 82, 895
AfiI CCNNNNNNNGG 2 cut(s) 832, 854
AgsI TTSAA 1 cut(s) 991
AluBI AGCT 3 cut(s) 769, 907, 952
AluI AGCT 3 cut(s) 769, 907, 952
Alw26I GTCTC 3 cut(s) 12, 67, 737
ApeKI GCWGC 1 cut(s) 878
AspLEI GCGC 1 cut(s) 776
AsuHPI GGTGA 2 cut(s) 90, 317
BbvI GCAGC 1 cut(s) 890
BccI CCATC 5 cut(s) 103, 225, 252, 353, 988
BceAI ACGGC 3 cut(s) 44, 137, 866
BcoDI GTCTC 3 cut(s) 12, 67, 737
BfaI CTAG 2 cut(s) 770, 872
BfoI RGCGCY 1 cut(s) 777
BisI GCNGC 1 cut(s) 879
BlsI GCNGC 1 cut(s) 880
Bpu10I CCTNAGC 1 cut(s) 276
BpuEI CTTGAG 1 cut(s) 968
BsaBI GATNNNNATC 1 cut(s) 806
BsaI GGTCTC 1 cut(s) 12
BsaJI CCNNGG 2 cut(s) 46, 831
BsaWI WCCGGW 1 cut(s) 847
Bsc4I CCNNNNNNNGG 2 cut(s) 832, 854
Bse118I RCCGGY 1 cut(s) 172
Bse1I ACTGG 2 cut(s) 128, 518
Bse3DI GCAATG 1 cut(s) 939
Bse8I GATNNNNATC 1 cut(s) 806
BseDI CCNNGG 2 cut(s) 46, 831
BseGI GGATG 3 cut(s) 124, 217, 244
BseJI GATNNNNATC 1 cut(s) 806
BseLI CCNNNNNNNGG 2 cut(s) 832, 854
BseMI GCAATG 1 cut(s) 939
BseNI ACTGG 2 cut(s) 128, 518
BseRI GAGGAG 5 cut(s) 29, 32, 360, 429, 714
BseXI GCAGC 1 cut(s) 890
BsiSI CCGG 2 cut(s) 173, 848
BslFI GGGAC 1 cut(s) 981
BslI CCNNNNNNNGG 2 cut(s) 832, 854
BsmAI GTCTC 3 cut(s) 12, 67, 737
BsmBI CGTCTC 1 cut(s) 67
BsmFI GGGAC 1 cut(s) 981
Bso31I GGTCTC 1 cut(s) 12
BspACI CCGC 5 cut(s) 137, 476, 530, 590, 999
BspTNI GGTCTC 1 cut(s) 12
BsrDI GCAATG 1 cut(s) 939
BsrFI RCCGGY 1 cut(s) 172
BsrI ACTGG 2 cut(s) 128, 518
BssAI RCCGGY 1 cut(s) 172
BssECI CCNNGG 2 cut(s) 46, 831
BssT1I CCWWGG 2 cut(s) 46, 831
Bst4CI ACNGT 6 cut(s) 80, 208, 235, 262, 289, 965
BstC8I GCNNGC 1 cut(s) 73
BstDEI CTNAG 1 cut(s) 276
BstF5I GGATG 3 cut(s) 124, 217, 244
BstH2I RGCGCY 1 cut(s) 777
BstHHI GCGC 1 cut(s) 776
BstMAI GTCTC 3 cut(s) 12, 67, 737
BstV1I GCAGC 1 cut(s) 890
BtsCI GGATG 3 cut(s) 124, 217, 244
Cac8I GCNNGC 1 cut(s) 73
CfoI GCGC 1 cut(s) 776
Cfr10I RCCGGY 1 cut(s) 172
CseI GACGC 1 cut(s) 884
Csp6I GTAC 2 cut(s) 81, 894
CviAII CATG 1 cut(s) 486
CviQI GTAC 2 cut(s) 81, 894
DdeI CTNAG 1 cut(s) 276
EciI GGCGGA 1 cut(s) 465
Eco130I CCWWGG 2 cut(s) 46, 831
Eco31I GGTCTC 1 cut(s) 12
Eco57I CTGAAG 1 cut(s) 785
EcoT14I CCWWGG 2 cut(s) 46, 831
ErhI CCWWGG 2 cut(s) 46, 831
Esp3I CGTCTC 1 cut(s) 67
FaeI CATG 1 cut(s) 489
FaiI YATR 4 cut(s) 69, 487, 554, 892
FaqI GGGAC 1 cut(s) 981
FatI CATG 1 cut(s) 485
FblI GTMKAC 1 cut(s) 446
Fnu4HI GCNGC 1 cut(s) 879
FokI GGATG 3 cut(s) 111, 204, 231
Fsp4HI GCNGC 1 cut(s) 879
FspBI CTAG 2 cut(s) 770, 872
GlaI GCGC 1 cut(s) 775
GluI GCNGC 1 cut(s) 879
HaeII RGCGCY 1 cut(s) 777
HapII CCGG 2 cut(s) 173, 848
HgaI GACGC 1 cut(s) 884
HhaI GCGC 1 cut(s) 776
Hin1II CATG 1 cut(s) 489
Hin6I GCGC 1 cut(s) 774
HinP1I GCGC 1 cut(s) 774
HinfI GANTC 2 cut(s) 511, 802
HpaII CCGG 2 cut(s) 173, 848
HphI GGTGA 2 cut(s) 90, 317
Hpy166II GTNNAC 5 cut(s) 378, 411, 447, 784, 863
Hpy188I TCNGA 3 cut(s) 453, 812, 985
Hpy188III TCNNGA 4 cut(s) 673, 740, 947, 959
Hpy8I GTNNAC 5 cut(s) 378, 411, 447, 784, 863
Hpy99I CGWCG 2 cut(s) 584, 674
HpyCH4III ACNGT 6 cut(s) 80, 208, 235, 262, 289, 965
HpyCH4IV ACGT 1 cut(s) 786
HpyF3I CTNAG 1 cut(s) 276
HpySE526I ACGT 1 cut(s) 786
Hsp92II CATG 1 cut(s) 489
HspAI GCGC 1 cut(s) 774
LpnPI CCDG 7 cut(s) 114, 141, 162, 186, 531, 753, 861
Lsp1109I GCAGC 1 cut(s) 890
MaeI CTAG 2 cut(s) 770, 872
MaeII ACGT 1 cut(s) 786
MaeIII GTNAC 4 cut(s) 523, 583, 673, 703
MboII GAAGA 1 cut(s) 947
MfeI CAATTG 1 cut(s) 753
MluCI AATT 1 cut(s) 753
MlyI GAGTC 1 cut(s) 505
MmeI TCCRAC 1 cut(s) 707
MseI TTAA 2 cut(s) 903, 1003
MspI CCGG 2 cut(s) 173, 848
MunI CAATTG 1 cut(s) 753
NlaIII CATG 1 cut(s) 489
NmuCI GTSAC 1 cut(s) 673
PfeI GAWTC 1 cut(s) 802
PkrI GCNGC 1 cut(s) 880
PleI GAGTC 1 cut(s) 505
PpsI GAGTC 1 cut(s) 505
RsaI GTAC 2 cut(s) 82, 895
RsaNI GTAC 2 cut(s) 81, 894
SaqAI TTAA 2 cut(s) 903, 1003
SatI GCNGC 1 cut(s) 879
SchI GAGTC 1 cut(s) 505
SmlI CTYRAG 1 cut(s) 947
SmoI CTYRAG 1 cut(s) 947
Sse9I AATT 1 cut(s) 753
SsiI CCGC 5 cut(s) 137, 476, 530, 590, 999
SspMI CTAG 2 cut(s) 770, 872
StyI CCWWGG 2 cut(s) 46, 831
TaaI ACNGT 6 cut(s) 80, 208, 235, 262, 289, 965
TaiI ACGT 1 cut(s) 789
TaqI TCGA 2 cut(s) 924, 960
TasI AATT 1 cut(s) 753
TfiI GAWTC 1 cut(s) 802
Tru1I TTAA 2 cut(s) 903, 1003
Tru9I TTAA 2 cut(s) 903, 1003
TseFI GTSAC 1 cut(s) 673
TseI GCWGC 1 cut(s) 878
Tsp45I GTSAC 1 cut(s) 673
TspGWI ACGGA 2 cut(s) 363, 432
XmiI GTMKAC 1 cut(s) 446
XspI CTAG 2 cut(s) 770, 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.