Rmu_sc0000218.1_g000053

36.4 kDa proline-rich

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000218.1
Physical Location & Seq
Reverse (-)
226311 .. 227186
876 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000218.1_g000053.1.cds

Sequence Viewer

Length: 876 bp
atggggacgaactatgttctggctttgctcttggttctgattctcaacttgggaagtttcctcacttctcttgcaaacgctccgtactgtccaccaccgacataccctcctaagttcccccccaaacaccctcctcatgtcaaaccaccatttcaccctataccacccaaacacccaccacatgtgaaaccaccagtaaaaccaccacatgtgaagcctccctacattccaaaacctcccgtaaaaccgccgcatgtgaagcctccctacattcccaaaccaccagtgaagccaccacatgtgaaacctccctatgtaccaacaccacaaccaccaattgtccaccctcccttcatcccaaaaccaccaattgtccacccacctttcatccctaaaccaccaattactcccaagccccccgtgtaccctagcccgccacctaaaccaccaattgtgaacccaccaactcccaagccccccgtgtaccctccaccggtgtaccctagcccgccaccgacacctgttgtgacccctaccccgccgccaccagcaacagaaacaccctgtcctcctccaccaccttcagtagtgccatacccaccgccgccaccaaaaaacacgtgtcccatcgacgctctcaagctaggggcttgtgtggacgtgcttggtgggctgattcacgttgggataggggaaagtgctaaagacgcttgctgtcctgtgcttcaaggactgctggacttggacgccgccatttgcctctgcaccaccatcaggcttaagctccttaacatcaacattatcataccccttgctcttcaggtcctcatcgactgtgggaagacaccgcccgatggattcaagtgtccttcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

291

Amino Acids

31.04

Weight (kDa)

9.46

Isoelectric Point (pI)

61.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014897)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 2 cut(s) 567, 803
AcvI CACGTG 1 cut(s) 621
AcyI GRCGYC 1 cut(s) 747
AfaI GTAC 5 cut(s) 86, 318, 425, 485, 500
AfiI CCNNNNNNNGG 3 cut(s) 493, 774, 854
AflII CTTAAG 1 cut(s) 779
AflIII ACRYGT 5 cut(s) 181, 208, 298, 618, 620
AgeI ACCGGT 1 cut(s) 493
AgsI TTSAA 2 cut(s) 728, 862
AjiI CACGTC 1 cut(s) 661
AluBI AGCT 2 cut(s) 643, 784
AluI AGCT 2 cut(s) 643, 784
AsiGI ACCGGT 1 cut(s) 493
AspS9I GGNCC 1 cut(s) 823
AsuHPI GGTGA 1 cut(s) 146
AvaII GGWCC 1 cut(s) 823
BaeI ACNNNNGTAYC 2 cut(s) 482, 515
BarI GAAGNNNNNNTAC 4 cut(s) 206, 238, 251, 283
BbrPI CACGTG 1 cut(s) 621
BbsI GAAGAC 1 cut(s) 848
BccI CCATC 3 cut(s) 635, 779, 848
BfaI CTAG 3 cut(s) 429, 504, 644
BfrI CTTAAG 1 cut(s) 779
BisI GCNGC 4 cut(s) 251, 542, 605, 750
BlsI GCNGC 4 cut(s) 252, 543, 606, 751
Bme18I GGWCC 1 cut(s) 823
BmgBI CACGTC 1 cut(s) 661
BmgT120I GGNCC 1 cut(s) 823
BpiI GAAGAC 1 cut(s) 848
BpuEI CTTGAG 1 cut(s) 623
BsaAI YACGTR 1 cut(s) 621
BsaHI GRCGYC 1 cut(s) 747
BsaWI WCCGGW 1 cut(s) 493
BsaXI ACNNNNNCTCC 2 cut(s) 91, 121
Bsc4I CCNNNNNNNGG 3 cut(s) 493, 774, 854
Bse118I RCCGGY 1 cut(s) 493
Bse1I ACTGG 2 cut(s) 194, 284
BseGI GGATG 2 cut(s) 354, 387
BseLI CCNNNNNNNGG 3 cut(s) 493, 774, 854
BseNI ACTGG 2 cut(s) 194, 284
BseRI GAGGAG 2 cut(s) 123, 561
BsgI GTGCAG 1 cut(s) 748
BshTI ACCGGT 1 cut(s) 493
BsiSI CCGG 1 cut(s) 494
BslFI GGGAC 2 cut(s) 19, 609
BslI CCNNNNNNNGG 3 cut(s) 493, 774, 854
BsmFI GGGAC 2 cut(s) 19, 609
BspQI GCTCTTC 1 cut(s) 822
BspTI CTTAAG 1 cut(s) 779
BsrFI RCCGGY 1 cut(s) 493
BsrI ACTGG 2 cut(s) 194, 284
BssAI RCCGGY 1 cut(s) 493
BssNI GRCGYC 1 cut(s) 747
Bst4CI ACNGT 2 cut(s) 89, 836
Bst6I CTCTTC 1 cut(s) 822
BstACI GRCGYC 1 cut(s) 747
BstAFI CTTAAG 1 cut(s) 779
BstBAI YACGTR 1 cut(s) 621
BstC8I GCNNGC 3 cut(s) 434, 509, 712
BstDEI CTNAG 1 cut(s) 111
BstF5I GGATG 2 cut(s) 354, 387
BstMWI GCNNNNNNNGC 3 cut(s) 259, 670, 707
BstNSI RCATGY 4 cut(s) 185, 212, 257, 302
BstV2I GAAGAC 1 cut(s) 848
BtrI CACGTC 1 cut(s) 661
BtsCI GGATG 2 cut(s) 354, 387
BtsIMutI CAGTG 1 cut(s) 291
Cac8I GCNNGC 3 cut(s) 434, 509, 712
Cfr10I RCCGGY 1 cut(s) 493
Cfr13I GGNCC 1 cut(s) 823
CseI GACGC 3 cut(s) 641, 716, 755
Csp6I GTAC 5 cut(s) 85, 317, 424, 484, 499
CspAI ACCGGT 1 cut(s) 493
CviAII CATG 5 cut(s) 137, 182, 209, 254, 299
CviQI GTAC 5 cut(s) 85, 317, 424, 484, 499
DdeI CTNAG 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 822
EarI CTCTTC 1 cut(s) 822
Eco47I GGWCC 1 cut(s) 823
Eco57I CTGAAG 2 cut(s) 567, 803
Eco72I CACGTG 1 cut(s) 621
EcoO109I RGGNCCY 1 cut(s) 823
FaeI CATG 5 cut(s) 140, 185, 212, 257, 302
FaqI GGGAC 2 cut(s) 19, 609
FatI CATG 5 cut(s) 136, 181, 208, 253, 298
FauI CCCGC 3 cut(s) 441, 516, 546
Fnu4HI GCNGC 4 cut(s) 251, 542, 605, 750
FokI GGATG 2 cut(s) 341, 374
Fsp4HI GCNGC 4 cut(s) 251, 542, 605, 750
FspBI CTAG 3 cut(s) 429, 504, 644
GluI GCNGC 4 cut(s) 251, 542, 605, 750
HapII CCGG 1 cut(s) 494
HgaI GACGC 3 cut(s) 641, 716, 755
Hin1I GRCGYC 1 cut(s) 747
Hin1II CATG 5 cut(s) 140, 185, 212, 257, 302
HinfI GANTC 3 cut(s) 40, 676, 858
HpaII CCGG 1 cut(s) 494
HphI GGTGA 1 cut(s) 146
Hpy166II GTNNAC 8 cut(s) 92, 343, 376, 424, 457, 484, 499, 658
Hpy188I TCNGA 1 cut(s) 39
Hpy8I GTNNAC 8 cut(s) 92, 343, 376, 424, 457, 484, 499, 658
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 2 cut(s) 361, 591
HpyCH4III ACNGT 2 cut(s) 89, 836
HpyCH4IV ACGT 3 cut(s) 620, 660, 681
HpyCH4V TGCA 2 cut(s) 74, 765
HpyF10VI GCNNNNNNNGC 3 cut(s) 259, 670, 707
HpyF3I CTNAG 1 cut(s) 111
HpySE526I ACGT 3 cut(s) 620, 660, 681
Hsp92I GRCGYC 1 cut(s) 747
Hsp92II CATG 5 cut(s) 140, 185, 212, 257, 302
LguI GCTCTTC 1 cut(s) 822
LmnI GCTCC 2 cut(s) 85, 789
MaeI CTAG 3 cut(s) 429, 504, 644
MaeII ACGT 3 cut(s) 620, 660, 681
MaeIII GTNAC 1 cut(s) 526
MboII GAAGA 2 cut(s) 809, 853
MfeI CAATTG 3 cut(s) 336, 369, 450
MluCI AATT 4 cut(s) 336, 369, 402, 450
MseI TTAA 2 cut(s) 780, 789
MspCI CTTAAG 1 cut(s) 779
MspI CCGG 1 cut(s) 494
MunI CAATTG 3 cut(s) 336, 369, 450
MwoI GCNNNNNNNGC 3 cut(s) 259, 670, 707
NlaIII CATG 5 cut(s) 140, 185, 212, 257, 302
NmuCI GTSAC 1 cut(s) 526
NspI RCATGY 4 cut(s) 185, 212, 257, 302
PciI ACATGT 3 cut(s) 181, 208, 298
PciSI GCTCTTC 1 cut(s) 822
PfeI GAWTC 3 cut(s) 40, 676, 858
PinAI ACCGGT 1 cut(s) 493
PkrI GCNGC 4 cut(s) 252, 543, 606, 751
PmaCI CACGTG 1 cut(s) 621
PmlI CACGTG 1 cut(s) 621
Ppu21I YACGTR 1 cut(s) 621
PpuMI RGGWCCY 1 cut(s) 823
PscI ACATGT 3 cut(s) 181, 208, 298
Psp5II RGGWCCY 1 cut(s) 823
PspCI CACGTG 1 cut(s) 621
PspPI GGNCC 1 cut(s) 823
PspPPI RGGWCCY 1 cut(s) 823
RsaI GTAC 5 cut(s) 86, 318, 425, 485, 500
RsaNI GTAC 5 cut(s) 85, 317, 424, 484, 499
SapI GCTCTTC 1 cut(s) 822
SaqAI TTAA 2 cut(s) 780, 789
SatI GCNGC 4 cut(s) 251, 542, 605, 750
Sau96I GGNCC 1 cut(s) 823
SgrAI CRCCGGYG 1 cut(s) 493
SinI GGWCC 1 cut(s) 823
SmlI CTYRAG 2 cut(s) 638, 779
SmoI CTYRAG 2 cut(s) 638, 779
Sse9I AATT 4 cut(s) 336, 369, 402, 450
SspMI CTAG 3 cut(s) 429, 504, 644
TaaI ACNGT 2 cut(s) 89, 836
TaiI ACGT 3 cut(s) 623, 663, 684
TaqI TCGA 2 cut(s) 630, 831
TasI AATT 4 cut(s) 336, 369, 402, 450
TauI GCSGC 4 cut(s) 253, 544, 607, 752
TfiI GAWTC 3 cut(s) 40, 676, 858
Tru1I TTAA 2 cut(s) 780, 789
Tru9I TTAA 2 cut(s) 780, 789
TscAI CASTG 1 cut(s) 291
TseFI GTSAC 1 cut(s) 526
Tsp45I GTSAC 1 cut(s) 526
TspDTI ATGAA 3 cut(s) 343, 376, 861
TspGWI ACGGA 1 cut(s) 72
TspRI CASTG 1 cut(s) 291
Vha464I CTTAAG 1 cut(s) 779
VpaK11BI GGWCC 1 cut(s) 823
XceI RCATGY 4 cut(s) 185, 212, 257, 302
XspI CTAG 3 cut(s) 429, 504, 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.