AT4G15160
ERF Family

Bifunctional inhibitor lipid-transfer protein seed storage 2S albumin superfamily protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
8646150 .. 8647252
1103 bp
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UTR
Exon/CDS
Intron
AT4G15160.1

Sequence Viewer

Length: 828 bp
ATGGCGCTTCTTCACAAGCAAAACATTTCCTTTGTGATACTCCTCCTCCTCGGTCTCCTTGCCGTCTCTTATGCTTGTGATTGTAGTGACCCTCCTAAACCATCACCACACCCTGTTAAACCGCCAAAACATCCCGCTAAACCACCTAAGCCCCCTACCGTTAAACCACCTACTCACACCCCAAAGCCTCCCACTGTGAAGCCTCCACCTCCATACATTCCATGCCCTCCTCCGCCCTATACTCCAAAACCTCCAACCGTGAAGCCACCACCACCTCCCTACGTGAAGCCACCACCACCTCCCACTGTGAAGCCACCACCACCTCCTTACGTGAAGCCACCACCACCCCCTACCGTGAAGCCACCACCACCACCCACGCCGTATACTCCACCACCACCCACGCCGTATACTCCTCCACCACCCACGGTGAAGCCACCACCACCACCGGTCGTTACCCCACCACCGCCAACACCAACCCCAGAGGCGCCATGTCCGCCACCACCACCAACACCATATCCTCCTCCGCCTAAACCGGAAACTTGTCCAATCGACGCACTGAAACTAGGCGCATGTGTGGACGTGCTAGGCGGTTTGATTCACATCGGACTAGGGAAAAGCTACGCTAAGGCAAAGTGTTGCCCACTTCTTGACGACTTAGTGGGTCTTGACGCGGCGGTTTGTCTCTGCACCACCATTAGAGCGAAGCTTCTCAACATTGACCTCATTATCCCAATTGCTCTAGAGGTTCTTGTCGACTGTGGTAAGACTCCTCCACCTCGTGGCTTCAAGTGTCCTACTCCGCTAAAAAGGACTCCTCTCTTGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

275

Amino Acids

28.94

Weight (kDa)

9.38

Isoelectric Point (pI)

63.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrophob_seed PF14547 180 - 265 5.7e-27 Hydrophobic seed protein
Tryp_alpha_amyl PF00234 181 - 264 4.9e-11 Protease inhibitor/seed storage/LTP family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014897)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 484
AccB7I CCANNNNNTGG 1 cut(s) 779
AccI GTMKAC 3 cut(s) 383, 407, 753
AccII CGCG 1 cut(s) 671
AcyI GRCGYC 1 cut(s) 485
AdeI CACNNNGTG 1 cut(s) 779
AfiI CCNNNNNNNGG 2 cut(s) 779, 821
AgeI ACCGGT 1 cut(s) 445
AgsI TTSAA 1 cut(s) 787
AjiI CACGTC 1 cut(s) 580
AluBI AGCT 2 cut(s) 618, 706
AluI AGCT 2 cut(s) 618, 706
Alw26I GTCTC 3 cut(s) 59, 70, 686
AsiGI ACCGGT 1 cut(s) 445
AspLEI GCGC 3 cut(s) 7, 487, 569
AsuHPI GGTGA 2 cut(s) 96, 439
BanI GGYRCC 1 cut(s) 484
BauI CACGAG 1 cut(s) 777
BccI CCATC 1 cut(s) 109
BceAI ACGGC 3 cut(s) 47, 364, 388
BcoDI GTCTC 3 cut(s) 59, 70, 686
BfaI CTAG 4 cut(s) 563, 584, 608, 740
BfoI RGCGCY 2 cut(s) 8, 488
BisI GCNGC 1 cut(s) 672
BlsI GCNGC 1 cut(s) 673
BmgBI CACGTC 1 cut(s) 580
BmiI GGNNCC 1 cut(s) 486
Bpu10I CCTNAGC 2 cut(s) 147, 624
BsaAI YACGTR 2 cut(s) 283, 331
BsaBI GATNNNNATC 1 cut(s) 599
BsaHI GRCGYC 1 cut(s) 485
BsaI GGTCTC 1 cut(s) 59
BsaJI CCNNGG 2 cut(s) 49, 423
BsaWI WCCGGW 2 cut(s) 445, 532
BsaXI ACNNNNNCTCC 2 cut(s) 30, 60
Bsc4I CCNNNNNNNGG 2 cut(s) 779, 821
Bse118I RCCGGY 1 cut(s) 445
Bse8I GATNNNNATC 1 cut(s) 599
BseDI CCNNGG 2 cut(s) 49, 423
BseGI GGATG 1 cut(s) 130
BseJI GATNNNNATC 1 cut(s) 599
BseLI CCNNNNNNNGG 2 cut(s) 779, 821
BseRI GAGGAG 8 cut(s) 32, 35, 38, 219, 402, 510, 759, 804
BsgI GTGCAG 1 cut(s) 670
Bsh1236I CGCG 1 cut(s) 671
Bsh1285I CGRYCG 1 cut(s) 450
BshNI GGYRCC 1 cut(s) 484
BshTI ACCGGT 1 cut(s) 445
BsiEI CGRYCG 1 cut(s) 450
BsiSI CCGG 2 cut(s) 446, 533
BslI CCNNNNNNNGG 2 cut(s) 779, 821
BsmAI GTCTC 3 cut(s) 59, 70, 686
BsmBI CGTCTC 1 cut(s) 70
Bso31I GGTCTC 1 cut(s) 59
BspFNI CGCG 1 cut(s) 671
BspLI GGNNCC 1 cut(s) 486
BspT107I GGYRCC 1 cut(s) 484
BspTNI GGTCTC 1 cut(s) 59
BsrFI RCCGGY 1 cut(s) 445
BssAI RCCGGY 1 cut(s) 445
BssECI CCNNGG 2 cut(s) 49, 423
BssNAI GTATAC 2 cut(s) 384, 408
BssNI GRCGYC 1 cut(s) 485
BssSI CACGAG 1 cut(s) 777
Bst1107I GTATAC 2 cut(s) 384, 408
Bst2BI CACGAG 1 cut(s) 777
Bst4CI ACNGT 7 cut(s) 160, 196, 259, 307, 355, 427, 758
BstACI GRCGYC 1 cut(s) 485
BstBAI YACGTR 2 cut(s) 283, 331
BstDEI CTNAG 3 cut(s) 147, 624, 655
BstDSI CCRYGG 1 cut(s) 423
BstF5I GGATG 1 cut(s) 130
BstFNI CGCG 1 cut(s) 671
BstH2I RGCGCY 2 cut(s) 8, 488
BstHHI GCGC 3 cut(s) 7, 487, 569
BstMAI GTCTC 3 cut(s) 59, 70, 686
BstMCI CGRYCG 1 cut(s) 450
BstMWI GCNNNNNNNGC 1 cut(s) 493
BstNSI RCATGY 1 cut(s) 573
BstUI CGCG 1 cut(s) 671
BstZ17I GTATAC 2 cut(s) 384, 408
BtgI CCRYGG 1 cut(s) 423
BtrI CACGTC 1 cut(s) 580
BtsCI GGATG 1 cut(s) 130
BtsIMutI CAGTG 3 cut(s) 192, 303, 554
CfoI GCGC 3 cut(s) 7, 487, 569
Cfr10I RCCGGY 1 cut(s) 445
CseI GACGC 2 cut(s) 560, 677
CspAI ACCGGT 1 cut(s) 445
CviAII CATG 3 cut(s) 222, 489, 570
DdeI CTNAG 3 cut(s) 147, 624, 655
DinI GGCGCC 1 cut(s) 486
DraIII CACNNNGTG 1 cut(s) 779
EciI GGCGGA 3 cut(s) 222, 483, 513
Eco31I GGTCTC 1 cut(s) 59
EgeI GGCGCC 1 cut(s) 486
EheI GGCGCC 1 cut(s) 486
Esp3I CGTCTC 1 cut(s) 70
FaeI CATG 3 cut(s) 225, 492, 573
FaiI YATR 9 cut(s) 72, 214, 223, 240, 384, 408, 490, 514, 571
FatI CATG 3 cut(s) 221, 488, 569
FauI CCCGC 1 cut(s) 142
FblI GTMKAC 3 cut(s) 383, 407, 753
Fnu4HI GCNGC 1 cut(s) 672
FokI GGATG 1 cut(s) 117
Fsp4HI GCNGC 1 cut(s) 672
FspBI CTAG 4 cut(s) 563, 584, 608, 740
GlaI GCGC 3 cut(s) 6, 486, 568
GluI GCNGC 1 cut(s) 672
HaeII RGCGCY 2 cut(s) 8, 488
HapII CCGG 2 cut(s) 446, 533
HgaI GACGC 2 cut(s) 560, 677
HhaI GCGC 3 cut(s) 7, 487, 569
Hin1I GRCGYC 1 cut(s) 485
Hin1II CATG 3 cut(s) 225, 492, 573
Hin6I GCGC 3 cut(s) 5, 485, 567
HinP1I GCGC 3 cut(s) 5, 485, 567
HincII GTYRAC 1 cut(s) 754
HindII GTYRAC 1 cut(s) 754
HindIII AAGCTT 1 cut(s) 704
HinfI GANTC 3 cut(s) 595, 766, 811
HpaII CCGG 2 cut(s) 446, 533
HphI GGTGA 2 cut(s) 96, 439
Hpy166II GTNNAC 4 cut(s) 384, 408, 577, 754
Hpy188I TCNGA 1 cut(s) 605
Hpy188III TCNNGA 3 cut(s) 647, 665, 740
Hpy8I GTNNAC 4 cut(s) 384, 408, 577, 754
Hpy99I CGWCG 1 cut(s) 554
HpyCH4III ACNGT 7 cut(s) 160, 196, 259, 307, 355, 427, 758
HpyCH4IV ACGT 3 cut(s) 282, 330, 579
HpyCH4V TGCA 1 cut(s) 687
HpyF10VI GCNNNNNNNGC 1 cut(s) 493
HpyF3I CTNAG 3 cut(s) 147, 624, 655
HpySE526I ACGT 3 cut(s) 282, 330, 579
Hsp92I GRCGYC 1 cut(s) 485
Hsp92II CATG 3 cut(s) 225, 492, 573
HspAI GCGC 3 cut(s) 5, 485, 567
KasI GGCGCC 1 cut(s) 484
LpnPI CCDG 4 cut(s) 126, 459, 492, 546
MaeI CTAG 4 cut(s) 563, 584, 608, 740
MaeII ACGT 3 cut(s) 282, 330, 579
MaeIII GTNAC 2 cut(s) 86, 451
MfeI CAATTG 1 cut(s) 732
MluCI AATT 1 cut(s) 732
Mly113I GGCGCC 1 cut(s) 485
MlyI GAGTC 2 cut(s) 760, 805
MmeI TCCRAC 1 cut(s) 278
MseI TTAA 2 cut(s) 117, 162
MspI CCGG 2 cut(s) 446, 533
MunI CAATTG 1 cut(s) 732
MvnI CGCG 1 cut(s) 671
MwoI GCNNNNNNNGC 1 cut(s) 493
NarI GGCGCC 1 cut(s) 485
NlaIII CATG 3 cut(s) 225, 492, 573
NlaIV GGNNCC 1 cut(s) 486
NmuCI GTSAC 1 cut(s) 86
NspI RCATGY 1 cut(s) 573
PfeI GAWTC 1 cut(s) 595
PflMI CCANNNNNTGG 1 cut(s) 779
PinAI ACCGGT 1 cut(s) 445
PkrI GCNGC 1 cut(s) 673
PleI GAGTC 2 cut(s) 760, 805
PluTI GGCGCC 1 cut(s) 488
PpsI GAGTC 2 cut(s) 760, 805
Ppu21I YACGTR 2 cut(s) 283, 331
PspN4I GGNNCC 1 cut(s) 486
SalI GTCGAC 1 cut(s) 752
SaqAI TTAA 2 cut(s) 117, 162
SatI GCNGC 1 cut(s) 672
SchI GAGTC 2 cut(s) 760, 805
SfoI GGCGCC 1 cut(s) 486
Sse9I AATT 1 cut(s) 732
SspDI GGCGCC 1 cut(s) 484
SspMI CTAG 4 cut(s) 563, 584, 608, 740
TaaI ACNGT 7 cut(s) 160, 196, 259, 307, 355, 427, 758
TaiI ACGT 3 cut(s) 285, 333, 582
TaqI TCGA 2 cut(s) 549, 753
TaqII GACCGA 1 cut(s) 41
TasI AATT 1 cut(s) 732
TauI GCSGC 1 cut(s) 674
TfiI GAWTC 1 cut(s) 595
Tru1I TTAA 2 cut(s) 117, 162
Tru9I TTAA 2 cut(s) 117, 162
TscAI CASTG 3 cut(s) 199, 310, 561
TseFI GTSAC 1 cut(s) 86
Tsp45I GTSAC 1 cut(s) 86
TspRI CASTG 3 cut(s) 199, 310, 561
Van91I CCANNNNNTGG 1 cut(s) 779
XbaI TCTAGA 1 cut(s) 739
XceI RCATGY 1 cut(s) 573
XmiI GTMKAC 3 cut(s) 383, 407, 753
XspI CTAG 4 cut(s) 563, 584, 608, 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.