Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005094

Physical Location & Seq

Genomic Coordinates Reverse (-)

8734611 .. 8741819

Gene Structure 7209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G24180.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGGTTGGAGCAACTTTGTTTCACCGTAGAAAGCATTCATGGCCGACTGAGGAATTCATCAGCAGAAGTACTTTGCAATTGCTCGATTTTGATAGTGCTGCTCCGCCACCACACGCATGGAGGAGGAGATTAAACTGCCATGCCAATATCTTAAAAGAATTCACTATTACTTTTAGGGAAGCCATTAAAATGGTACGCTTGGGGATACGATTATGGTCTTATGTCAGAGAAGAGGCCTCCCATGGAAGGAAAGCACCTATCGATCCCTTCACCAAAGAGAACTGCAAACCATCTGCATCCCAAGGTGTTCCACTCGGAGGAATGGGAAGTGGAAGCATATCTAGGGGCTTCAGAGGGGAGTTTAAGCAGTGGCAAATCACTCCTGGGACTTGCGATCCATCACCTATGATGTCTAATCAGTTCTCTATTTTTATTTCACGAGATGGTGGACACAAAAAGTATGCATCAGTTTTGTCTCCAGGCCAGCATGGAAGTTTAGGAAAGTCGCGTGATAAAGGTCTTTCTTCATGGGGCTGGAATCTGAATGGCCAGCATTCAACTTATCATGCTCTATTTCCTCGGGCTTGGACTATATATGATGGTGAGCCTGATCCAGAGTTAAAGATTTCCTGCCGGCAAATATCACCTTTTATACCAAACAATTATCGAGATAGTAGTCTTCCAGCAGCTGTTTTTGTATATACTTTGGTGAACACTGGAAAGGAAAGGGCAAAAGTCAGCCTTCTTTTCACATGGGCGAATTCAATGGGTGGGACTTCACATATGTCAGGGGGTCATGTGAATGAGCCATTCATAGGTGAAGATGGGGTCTCTGGCGTCCTCTTACATCACAAGACAGGCAAAGGAAATCCTCCTGTTACATTTGCGATTGCTGCTTCTGAGACTCAGAATGTTAATGTAACTGTTTTACCATGCTTTGGATTGTCTGAAGATAGTTCTTTTACAGCGAAAGATATGTGGGATACAATGGAACAGGATGGGAAATTTGATCAAGAAAACTTCAATAGCGGGCCAAGCACACCTTCATTAGCTGGAGACACTATTTGTGCAGCAGTCTCGGCTTCGGCATGGGTAGAAGCTCATGGCAAGTGCACTGTGTCTTTTGCACTTTCATGGTCATCGCCAAAAGTGAAATTTTCAAAGGGAAGCACATATGACAGGAGATACACTAAATTTTATGGTACTTCGCCAAGAGCAGCGTTGGACCTTGTGCATGATGCACTGACAAATTATAAGAGGTGGGAGGAAGATATTGAAGCATGGCAGAATCCCATTCTCAGAGATGAAAGGCTCCCTGAGTGGTACAAGTTCACTCTGTTCAATGAGCTTTACTTTTTGGTTGCCGGTGGTACAGTTTGGATAGACTCTTCTTCACTCAATGCTAATGGGAATAGTCAGCATCAACAATCGGGATTAGGAAATTCAGATGGTAAGGTCGGTGGACTTGACATTAATGATCAACGGAATGACCTTGGTAATGGCAACAGCGTTGGAGTAAAAAGCAATGATGAAGTATCAGCCATTCATAACCGGAATGGTTTATTTGTCGATACTCCCCATGTAGATGATGGCGATGATGTTGGTCGGTTTCTGTATTTGGAAGGTGTGGAGTATGTGATGTGGTGCACATATGATGTACACTTTTACGCATCATATGCGCTCCTTATGCTATTCCCAAAGATCGAACTAAACATCCAGCGTGATTTTGCGAAAGCCGTGTTGTCTGAAGATGGTAGGAAGGTTAAGTTCCTGGCAGAAGGAAATGTGGGAATTCGCAAGGTCAGAGGTGCTGTTCCTCACGATCTGGGGATGCATGATCCTTGGAATGAAATGAATGCCTACAACATACATGACACAAGCAGGTGGAAGGATCTGAACCCAAAGTTTGTGCTTCAGGTGTATAGAGATTTTGCAGCTACAGGGGATTACCAATTTGGAATAGACGTGTGGCCCGCAGTTCGTGCTGCTATGGAGTACATGGAACAGTTTGATAGAGACAATGACGATCTAATAGAGAATGATGGTTTCCCAGATCAGACATATGATACATGGACTGTTCATGGCGTGAGTGCCTACTGCGGTTGCCTGTGGCTGGCTGCTCTTCAAGCTGCAGCAGCAATGGCTCTCCAAATTGGTGACAAATTCTTTGCAGAACTTTGTAAAAATAAGTTTTTGAATGCAAAGGCAGCACTGGAAACGAAACTCTGGAATGGATCATACTTCAATTACGACAGTGGGTCAAGCAGCAACAGCAAATCTATACAGACCGATCAGCTGGCGGGTCAATGGTATGCCGCGTCTTCAGGTCTGCCTCCATTATTTGAGGAATCCAAAATCAGAAGCACTATGCAAAAGATCTTTGATTTCAATGTGATGAAGACAAAAGGAGGTAAAATGGGTGCTGTAAATGGGATGCATCCGGATGGGAAAGTGGATGACACGTGCATGCAGTCTCGTGAGATATGGACAGGTGTTACTTATGCAGCTGCGGCTACTATGATCCTCTCTGGAATGGAAGAACAAGGTTTCACCACTGCTGAGGGAATTTTCACAGCTGGCTGGTCAGAAGAAGGTTTCGGATATTGGTTCCAGACACCGGAAGGTTGGACAATGGATGGGCATTACCGGTCACTGATATACATGAGACCGCTCGCGATATGGGGAATGCAATGGGCATTATCGTTGCCAAAGGCAATTCTGGACGCTCCACAGATCAACATGATGGACAGAGTACACTTATCCCCTAGAAGCCGAAGATTCTCGAACAACTTCAAAGTTGTGAAACACAAGGCAAAGTGTTTTGGTAATTCAGCATTAAGCTGTTCTTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

950

Amino Acids

105.99

Weight (kDa)

6.33

Isoelectric Point (pI)

43.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydr_116N	PF12215	102 - 421	2.2e-108	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
DUF608	PF04685	535 - 896	4.7e-157	Glycosyl-hydrolase family 116, catalytic region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24180 AT3G24180
fragaria_vesca	FvH4_4g00440 FvH4_4g00440 FvH4_4g00440 FvH4_4g00440 FvH4_4g00440
malus_domestica	MD04G1004800.v1.1
prunus_persica	Prupe.1G004700_v2.0.a1 Prupe.1G004700_v2.0.a1 Prupe.1G004700_v2.0.a1
pyrus_communis	pycom04g00480
rosa_chinensis	RchiOBHm_Chr4g0385861
rosa_laevigata	RLG00000010208
rosa_multiflora	Rmu_co8376727.1_g000001 Rmu_co8521537.1_g000001 Rmu_sc0004773.1_g000004 Rmu_sc0008728.1_g000010
rosa_roxburghii	Rroxscaffold_5G00333460
rosa_rugosa	Rorug01G0169800 Rorug03G0301400 Rorug03G0301500 Rorug03G0301600 Rorug03G0301700 Rorug05G0362900
rosa_samantha	Rh4AG006800 Rh4BG004300 Rh4CG007300 Rh4DG006300
rosa_wichuraiana	Rw4G000370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1254
AarI	CACCTGC	1 cut(s)	1872
Acc36I	ACCTGC	1 cut(s)	1872
AccB7I	CCANNNNNTGG	1 cut(s)	938
AccBSI	CCGCTC	1 cut(s)	2671
AccII	CGCG	3 cut(s)	508, 2318, 2675
AccIII	TCCGGA	1 cut(s)	2440
AciI	CCGC	8 cut(s)	104, 1029, 1974, 2100, 2300, 2316, 2510, 2669
AclWI	GGATC	7 cut(s)	257, 389, 605, 1832, 1899, 2242, 2515
AcoI	YGGCCR	2 cut(s)	41, 547
AcuI	CTGAAG	5 cut(s)	334, 969, 1767, 1898, 2307
AcvI	CACGTG	1 cut(s)	2463
AcyI	GRCGYC	1 cut(s)	837
AfaI	GTAC	8 cut(s)	70, 195, 1204, 1325, 1372, 1659, 1997, 2754
AfiI	CCNNNNNNNGG	6 cut(s)	246, 317, 815, 938, 2113, 2617
AflIII	ACRYGT	2 cut(s)	1965, 2460
AgeI	ACCGGT	1 cut(s)	2646
AhdI	GACNNNNNGTC	1 cut(s)	2257
AjiI	CACGTC	1 cut(s)	1966
AjnI	CCWGG	3 cut(s)	382, 478, 1770
AjuI	GAANNNNNNNTTGG	2 cut(s)	1027, 1059
AloI	GAACNNNNNNTCC	2 cut(s)	1698, 1730
Alw21I	GWGCWC	2 cut(s)	1115, 1649
Alw26I	GTCTC	8 cut(s)	480, 835, 896, 1050, 1081, 2010, 2478, 2659
Alw44I	GTGCAC	2 cut(s)	1111, 1645
AlwI	GGATC	7 cut(s)	257, 389, 605, 1832, 1899, 2242, 2515
AlwNI	CAGNNNCTG	1 cut(s)	689
Ama87I	CYCGRG	1 cut(s)	579
Aor13HI	TCCGGA	1 cut(s)	2440
AoxI	GGCC	6 cut(s)	41, 234, 481, 547, 1031, 1970
ApaLI	GTGCAC	2 cut(s)	1111, 1645
ArsI	GACNNNNNNTTYG	2 cut(s)	2150, 2182
AseI	ATTAAT	1 cut(s)	1473
AsiGI	ACCGGT	1 cut(s)	2646
Asp700I	GAANNNNTTC	2 cut(s)	34, 2789
AspLEI	GCGC	1 cut(s)	1681
AspS9I	GGNCC	3 cut(s)	1031, 1225, 1971
AsuHPI	GGTGA	9 cut(s)	14, 262, 393, 614, 636, 721, 830, 2168, 2542
AvaI	CYCGRG	1 cut(s)	579
AvaII	GGWCC	1 cut(s)	1225
BaeGI	GKGCMC	2 cut(s)	1115, 1649
BalI	TGGCCA	1 cut(s)	549
BauI	CACGAG	2 cut(s)	438, 2475
BbrPI	CACGTG	1 cut(s)	2463
BbsI	GAAGAC	3 cut(s)	671, 2313, 2405
Bbv12I	GWGCWC	2 cut(s)	1115, 1649
BbvCI	CCTCAGC	1 cut(s)	2559
BceAI	ACGGC	1 cut(s)	1721
BcgI	CGANNNNNNTGC	2 cut(s)	1059, 1093
BciT130I	CCWGG	3 cut(s)	384, 480, 1772
BciVI	GTATCC	2 cut(s)	198, 976
BclI	TGATCA	2 cut(s)	1009, 1477
BcoDI	GTCTC	8 cut(s)	480, 835, 896, 1050, 1081, 2010, 2478, 2659
BfaI	CTAG	2 cut(s)	342, 2766
BfmI	CTRYAG	2 cut(s)	1938, 2130
BfuAI	ACCTGC	1 cut(s)	1872
BfuI	GTATCC	2 cut(s)	198, 976
BglII	AGATCT	1 cut(s)	2376
BmcAI	AGTACT	1 cut(s)	70
Bme1390I	CCNGG	3 cut(s)	384, 480, 1772
Bme18I	GGWCC	1 cut(s)	1225
BmeRI	GACNNNNNGTC	1 cut(s)	2257
BmeT110I	CYCGRG	1 cut(s)	579
BmgBI	CACGTC	1 cut(s)	1966
BmgT120I	GGNCC	3 cut(s)	1031, 1225, 1971
BmiI	GGNNCC	2 cut(s)	1313, 2609
BmrFI	CCNGG	3 cut(s)	384, 480, 1772
BmsI	GCATC	8 cut(s)	305, 473, 1228, 1429, 1679, 1821, 2424, 2446
BpiI	GAAGAC	3 cut(s)	671, 2313, 2405
BpmI	CTGGAG	2 cut(s)	462, 1074
Bpu10I	CCTNAGC	1 cut(s)	2559
Bsa29I	ATCGAT	1 cut(s)	261
BsaAI	YACGTR	1 cut(s)	2463
BsaHI	GRCGYC	1 cut(s)	837
BsaI	GGTCTC	2 cut(s)	835, 2659
BsaJI	CCNNGG	6 cut(s)	241, 301, 383, 578, 1492, 1841
BsaWI	WCCGGW	4 cut(s)	1551, 2440, 2617, 2646
Bsc4I	CCNNNNNNNGG	6 cut(s)	246, 317, 815, 938, 2113, 2617
Bse118I	RCCGGY	3 cut(s)	633, 1364, 2646
Bse1I	ACTGG	2 cut(s)	721, 2217
Bse3DI	GCAATG	3 cut(s)	1531, 2145, 2696
BseAI	TCCGGA	1 cut(s)	2440
BseBI	CCWGG	3 cut(s)	384, 480, 1772
BseCI	ATCGAT	1 cut(s)	261
BseDI	CCNNGG	6 cut(s)	241, 301, 383, 578, 1492, 1841
BseGI	GGATG	9 cut(s)	296, 1003, 1713, 1836, 2437, 2439, 2449, 2461, 2641
BseLI	CCNNNNNNNGG	6 cut(s)	246, 317, 815, 938, 2113, 2617
BseMI	GCAATG	3 cut(s)	1531, 2145, 2696
BseMII	CTCAG	6 cut(s)	39, 891, 920, 1308, 1312, 2550
BseNI	ACTGG	2 cut(s)	721, 2217
BseRI	GAGGAG	2 cut(s)	136, 139
BseSI	GKGCMC	2 cut(s)	1115, 1649
BsgI	GTGCAG	1 cut(s)	1089
Bsh1236I	CGCG	3 cut(s)	508, 2318, 2675
BshFI	GGCC	6 cut(s)	43, 236, 483, 549, 1033, 1972
BshTI	ACCGGT	1 cut(s)	2646
BshVI	ATCGAT	1 cut(s)	261
BsiHKAI	GWGCWC	2 cut(s)	1115, 1649
BsiHKCI	CYCGRG	1 cut(s)	579
BsiSI	CCGG	6 cut(s)	634, 1365, 1552, 2441, 2618, 2647
BslFI	GGGAC	2 cut(s)	400, 787
BslI	CCNNNNNNNGG	6 cut(s)	246, 317, 815, 938, 2113, 2617
BsmAI	GTCTC	8 cut(s)	480, 835, 896, 1050, 1081, 2010, 2478, 2659
BsmFI	GGGAC	2 cut(s)	400, 787
BsmI	GAATGC	5 cut(s)	34, 553, 1861, 2203, 2691
BsnI	GGCC	6 cut(s)	43, 236, 483, 549, 1033, 1972
Bso31I	GGTCTC	2 cut(s)	835, 2659
BsoBI	CYCGRG	1 cut(s)	579
Bsp1286I	GDGCHC	2 cut(s)	1115, 1649
Bsp13I	TCCGGA	1 cut(s)	2440
Bsp1407I	TGTACA	1 cut(s)	1657
Bsp19I	CCATGG	1 cut(s)	241
Bsp68I	TCGCGA	1 cut(s)	2675
BspACI	CCGC	8 cut(s)	104, 1029, 1974, 2100, 2300, 2316, 2510, 2669
BspANI	GGCC	6 cut(s)	43, 236, 483, 549, 1033, 1972
BspCNI	CTCAG	6 cut(s)	40, 892, 919, 1309, 1311, 2551
BspDI	ATCGAT	1 cut(s)	261
BspEI	TCCGGA	1 cut(s)	2440
BspFNI	CGCG	3 cut(s)	508, 2318, 2675
BspLI	GGNNCC	2 cut(s)	1313, 2609
BspMAI	CTGCAG	1 cut(s)	2134
BspMI	ACCTGC	1 cut(s)	1872
BspPI	GGATC	7 cut(s)	257, 389, 605, 1832, 1899, 2242, 2515
BspQI	GCTCTTC	1 cut(s)	2127
BspTNI	GGTCTC	2 cut(s)	835, 2659
BsrBI	CCGCTC	1 cut(s)	2671
BsrDI	GCAATG	3 cut(s)	1531, 2145, 2696
BsrFI	RCCGGY	3 cut(s)	633, 1364, 2646
BsrGI	TGTACA	1 cut(s)	1657
BsrI	ACTGG	2 cut(s)	721, 2217
BssAI	RCCGGY	3 cut(s)	633, 1364, 2646
BssECI	CCNNGG	6 cut(s)	241, 301, 383, 578, 1492, 1841
BssNI	GRCGYC	1 cut(s)	837
BssSI	CACGAG	2 cut(s)	438, 2475
BssT1I	CCWWGG	4 cut(s)	241, 301, 1492, 1841
Bst2BI	CACGAG	2 cut(s)	438, 2475
Bst2UI	CCWGG	3 cut(s)	384, 480, 1772
Bst4CI	ACNGT	7 cut(s)	26, 925, 1117, 1375, 2007, 2077, 2255
Bst6I	CTCTTC	3 cut(s)	225, 1393, 2127
BstACI	GRCGYC	1 cut(s)	837
BstAPI	GCANNNNNTGC	2 cut(s)	1676, 1982
BstAUI	TGTACA	1 cut(s)	1657
BstBAI	YACGTR	1 cut(s)	2463
BstDEI	CTNAG	6 cut(s)	48, 900, 906, 1298, 1317, 2559
BstDSI	CCRYGG	1 cut(s)	241
BstF5I	GGATG	9 cut(s)	296, 1003, 1713, 1836, 2437, 2439, 2449, 2461, 2641
BstFNI	CGCG	3 cut(s)	508, 2318, 2675
BstHHI	GCGC	1 cut(s)	1681
BstMAI	GTCTC	8 cut(s)	480, 835, 896, 1050, 1081, 2010, 2478, 2659
BstNI	CCWGG	3 cut(s)	384, 480, 1772
BstNSI	RCATGY	1 cut(s)	2470
BstSCI	CCNGG	3 cut(s)	382, 478, 1770
BstSFI	CTRYAG	2 cut(s)	1938, 2130
BstSLI	GKGCMC	2 cut(s)	1115, 1649
BstUI	CGCG	3 cut(s)	508, 2318, 2675
BstV2I	GAAGAC	3 cut(s)	671, 2313, 2405
BstX2I	RGATCY	2 cut(s)	1891, 2376
BstXI	CCANNNNNNTGG	2 cut(s)	117, 190
BstYI	RGATCY	2 cut(s)	1891, 2376
Bsu15I	ATCGAT	1 cut(s)	261
BsuI	GTATCC	2 cut(s)	198, 976
BsuRI	GGCC	6 cut(s)	43, 236, 483, 549, 1033, 1972
BsuTUI	ATCGAT	1 cut(s)	261
BtgI	CCRYGG	1 cut(s)	241
BtgZI	GCGATG	2 cut(s)	1125, 1608
BtrI	CACGTC	1 cut(s)	1966
BtsCI	GGATG	9 cut(s)	296, 1003, 1713, 1836, 2437, 2439, 2449, 2461, 2641
BtsI	GCAGTG	2 cut(s)	374, 2553
BtsIMutI	CAGTG	8 cut(s)	374, 714, 1113, 1241, 2210, 2260, 2553, 2651
BtuMI	TCGCGA	1 cut(s)	2675
BveI	ACCTGC	1 cut(s)	1872
CaiI	CAGNNNCTG	1 cut(s)	689
CfoI	GCGC	1 cut(s)	1681
Cfr10I	RCCGGY	3 cut(s)	633, 1364, 2646
Cfr13I	GGNCC	3 cut(s)	1031, 1225, 1971
ClaI	ATCGAT	1 cut(s)	261
CseI	GACGC	3 cut(s)	826, 2307, 2732
Csp6I	GTAC	8 cut(s)	69, 194, 1203, 1324, 1371, 1658, 1996, 2753
CspAI	ACCGGT	1 cut(s)	2646
CviQI	GTAC	8 cut(s)	69, 194, 1203, 1324, 1371, 1658, 1996, 2753
DdeI	CTNAG	6 cut(s)	48, 900, 906, 1298, 1317, 2559
DriI	GACNNNNNGTC	1 cut(s)	2257
EaeI	YGGCCR	2 cut(s)	41, 547
Eam1104I	CTCTTC	3 cut(s)	225, 1393, 2127
Eam1105I	GACNNNNNGTC	1 cut(s)	2257
EarI	CTCTTC	3 cut(s)	225, 1393, 2127
EciI	GGCGGA	1 cut(s)	93
Eco130I	CCWWGG	4 cut(s)	241, 301, 1492, 1841
Eco147I	AGGCCT	1 cut(s)	236
Eco31I	GGTCTC	2 cut(s)	835, 2659
Eco47I	GGWCC	1 cut(s)	1225
Eco57I	CTGAAG	5 cut(s)	334, 969, 1767, 1898, 2307
Eco72I	CACGTG	1 cut(s)	2463
Eco88I	CYCGRG	1 cut(s)	579
EcoRI	GAATTC	4 cut(s)	53, 158, 760, 1791
EcoRII	CCWGG	3 cut(s)	382, 478, 1770
EcoT14I	CCWWGG	4 cut(s)	241, 301, 1492, 1841
EcoT22I	ATGCAT	3 cut(s)	466, 1836, 2439
ErhI	CCWWGG	4 cut(s)	241, 301, 1492, 1841
FalI	AAGNNNNNCTT	5 cut(s)	726, 758, 1027, 1059, 2830
FaqI	GGGAC	2 cut(s)	400, 787
FauI	CCCGC	3 cut(s)	1022, 1981, 2293
FauNDI	CATATG	5 cut(s)	783, 1174, 1651, 1675, 2062
FbaI	TGATCA	2 cut(s)	1009, 1477
FokI	GGATG	9 cut(s)	283, 1010, 1700, 1843, 2424, 2446, 2456, 2468, 2648
FspBI	CTAG	2 cut(s)	342, 2766
GlaI	GCGC	1 cut(s)	1680
GsuI	CTGGAG	2 cut(s)	462, 1074
HaeIII	GGCC	6 cut(s)	43, 236, 483, 549, 1033, 1972
HapII	CCGG	6 cut(s)	634, 1365, 1552, 2441, 2618, 2647
HgaI	GACGC	3 cut(s)	826, 2307, 2732
HhaI	GCGC	1 cut(s)	1681
Hin1I	GRCGYC	1 cut(s)	837
Hin6I	GCGC	1 cut(s)	1679
HinP1I	GCGC	1 cut(s)	1679
HinfI	GANTC	6 cut(s)	538, 904, 1288, 1385, 2348, 2778
HpaII	CCGG	6 cut(s)	634, 1365, 1552, 2441, 2618, 2647
HphI	GGTGA	9 cut(s)	14, 262, 393, 614, 636, 721, 830, 2168, 2542
Hpy166II	GTNNAC	8 cut(s)	449, 712, 1113, 1332, 1463, 1647, 1660, 2755
Hpy8I	GTNNAC	8 cut(s)	449, 712, 1113, 1332, 1463, 1647, 1660, 2755
HpyCH4III	ACNGT	7 cut(s)	26, 925, 1117, 1375, 2007, 2077, 2255
HpyCH4IV	ACGT	2 cut(s)	1965, 2462
HpyF3I	CTNAG	6 cut(s)	48, 900, 906, 1298, 1317, 2559
HpySE526I	ACGT	2 cut(s)	1965, 2462
Hsp92I	GRCGYC	1 cut(s)	837
HspAI	GCGC	1 cut(s)	1679
Kpn2I	TCCGGA	1 cut(s)	2440
KroI	GCCGGC	1 cut(s)	633
KroNI	GCCGGC	1 cut(s)	635
Ksp22I	TGATCA	2 cut(s)	1009, 1477
LguI	GCTCTTC	1 cut(s)	2127
LmnI	GCTCC	5 cut(s)	8, 106, 1317, 1686, 2731
LweI	GCATC	8 cut(s)	305, 473, 1228, 1429, 1679, 1821, 2424, 2446
MaeI	CTAG	2 cut(s)	342, 2766
MaeII	ACGT	2 cut(s)	1965, 2462
MaeIII	GTNAC	5 cut(s)	877, 919, 2156, 2494, 2649
MbiI	CCGCTC	1 cut(s)	2671
MfeI	CAATTG	1 cut(s)	77
MflI	RGATCY	2 cut(s)	1891, 2376
MhlI	GDGCHC	2 cut(s)	1115, 1649
MlsI	TGGCCA	1 cut(s)	549
MluNI	TGGCCA	1 cut(s)	549
MlyI	GAGTC	2 cut(s)	898, 1379
MmeI	TCCRAC	3 cut(s)	1203, 1492, 2606
Mox20I	TGGCCA	1 cut(s)	549
Mph1103I	ATGCAT	3 cut(s)	466, 1836, 2439
MroI	TCCGGA	1 cut(s)	2440
MroNI	GCCGGC	1 cut(s)	633
MroXI	GAANNNNTTC	2 cut(s)	34, 2789
MscI	TGGCCA	1 cut(s)	549
MseI	TTAA	9 cut(s)	131, 152, 186, 363, 620, 915, 1473, 1764, 2837
MslI	CAYNNNNRTG	7 cut(s)	115, 188, 801, 1132, 1584, 2442, 2465
Msp20I	TGGCCA	1 cut(s)	549
MspA1I	CMGCKG	4 cut(s)	689, 2296, 2507, 2576
MspI	CCGG	6 cut(s)	634, 1365, 1552, 2441, 2618, 2647
MspR9I	CCNGG	3 cut(s)	384, 480, 1772
MunI	CAATTG	1 cut(s)	77
Mva1269I	GAATGC	5 cut(s)	34, 553, 1861, 2203, 2691
MvaI	CCWGG	3 cut(s)	384, 480, 1772
MvnI	CGCG	3 cut(s)	508, 2318, 2675
NaeI	GCCGGC	1 cut(s)	635
NcoI	CCATGG	1 cut(s)	241
NdeI	CATATG	5 cut(s)	783, 1174, 1651, 1675, 2062
NgoMIV	GCCGGC	1 cut(s)	633
NlaIV	GGNNCC	2 cut(s)	1313, 2609
NmeAIII	GCCGAG	1 cut(s)	1058
NmuCI	GTSAC	2 cut(s)	2156, 2649
NruI	TCGCGA	1 cut(s)	2675
NsiI	ATGCAT	3 cut(s)	466, 1836, 2439
NspI	RCATGY	1 cut(s)	2470
PaeI	GCATGC	1 cut(s)	2470
PaqCI	CACCTGC	1 cut(s)	1872
PceI	AGGCCT	1 cut(s)	236
PciSI	GCTCTTC	1 cut(s)	2127
PctI	GAATGC	5 cut(s)	34, 553, 1861, 2203, 2691
PdiI	GCCGGC	1 cut(s)	635
PdmI	GAANNNNTTC	2 cut(s)	34, 2789
PfeI	GAWTC	4 cut(s)	538, 1288, 2348, 2778
PflMI	CCANNNNNTGG	1 cut(s)	938
PinAI	ACCGGT	1 cut(s)	2646
PleI	GAGTC	2 cut(s)	898, 1379
PmaCI	CACGTG	1 cut(s)	2463
PmlI	CACGTG	1 cut(s)	2463
PpsI	GAGTC	2 cut(s)	898, 1379
Ppu21I	YACGTR	1 cut(s)	2463
PshBI	ATTAAT	1 cut(s)	1473
PsiI	TTATAA	1 cut(s)	1254
Psp6I	CCWGG	3 cut(s)	382, 478, 1770
PspCI	CACGTG	1 cut(s)	2463
PspGI	CCWGG	3 cut(s)	382, 478, 1770
PspN4I	GGNNCC	2 cut(s)	1313, 2609
PspPI	GGNCC	3 cut(s)	1031, 1225, 1971
PstI	CTGCAG	1 cut(s)	2134
PstNI	CAGNNNCTG	1 cut(s)	689
PsuI	RGATCY	2 cut(s)	1891, 2376
PvuII	CAGCTG	4 cut(s)	689, 2296, 2507, 2576
RruI	TCGCGA	1 cut(s)	2675
RsaI	GTAC	8 cut(s)	70, 195, 1204, 1325, 1372, 1659, 1997, 2754
RsaNI	GTAC	8 cut(s)	69, 194, 1203, 1324, 1371, 1658, 1996, 2753
RseI	CAYNNNNRTG	7 cut(s)	115, 188, 801, 1132, 1584, 2442, 2465
SapI	GCTCTTC	1 cut(s)	2127
SaqAI	TTAA	9 cut(s)	131, 152, 186, 363, 620, 915, 1473, 1764, 2837
Sau96I	GGNCC	3 cut(s)	1031, 1225, 1971
ScaI	AGTACT	1 cut(s)	70
SchI	GAGTC	2 cut(s)	898, 1379
ScrFI	CCNGG	3 cut(s)	384, 480, 1772
SduI	GDGCHC	2 cut(s)	1115, 1649
SfaNI	GCATC	8 cut(s)	305, 473, 1228, 1429, 1679, 1821, 2424, 2446
SfcI	CTRYAG	2 cut(s)	1938, 2130
SinI	GGWCC	1 cut(s)	1225
SmiMI	CAYNNNNRTG	7 cut(s)	115, 188, 801, 1132, 1584, 2442, 2465
SphI	GCATGC	1 cut(s)	2470
SseBI	AGGCCT	1 cut(s)	236
SsiI	CCGC	8 cut(s)	104, 1029, 1974, 2100, 2300, 2316, 2510, 2669
SspMI	CTAG	2 cut(s)	342, 2766
StuI	AGGCCT	1 cut(s)	236
StyD4I	CCNGG	3 cut(s)	382, 478, 1770
StyI	CCWWGG	4 cut(s)	241, 301, 1492, 1841
TaaI	ACNGT	7 cut(s)	26, 925, 1117, 1375, 2007, 2077, 2255
TaiI	ACGT	2 cut(s)	1968, 2465
TaqI	TCGA	6 cut(s)	84, 261, 667, 1569, 1704, 2783
TaqII	GACCGA	1 cut(s)	2303
TatI	WGTACW	4 cut(s)	68, 1657, 1995, 2752
TauI	GCSGC	2 cut(s)	2318, 2513
TfiI	GAWTC	4 cut(s)	538, 1288, 2348, 2778
Tru1I	TTAA	9 cut(s)	131, 152, 186, 363, 620, 915, 1473, 1764, 2837
Tru9I	TTAA	9 cut(s)	131, 152, 186, 363, 620, 915, 1473, 1764, 2837
TscAI	CASTG	8 cut(s)	374, 721, 1120, 1248, 2217, 2260, 2560, 2658
TseFI	GTSAC	2 cut(s)	2156, 2649
Tsp45I	GTSAC	2 cut(s)	2156, 2649
TspGWI	ACGGA	1 cut(s)	1498
TspRI	CASTG	8 cut(s)	374, 721, 1120, 1248, 2217, 2260, 2560, 2658
Van91I	CCANNNNNTGG	1 cut(s)	938
VneI	GTGCAC	2 cut(s)	1111, 1645
VpaK11BI	GGWCC	1 cut(s)	1225
VspI	ATTAAT	1 cut(s)	1473
XceI	RCATGY	1 cut(s)	2470
XcmI	CCANNNNNNNNNTGG	2 cut(s)	114, 1586
XmnI	GAANNNNTTC	2 cut(s)	34, 2789
XspI	CTAG	2 cut(s)	342, 2766
ZrmI	AGTACT	1 cut(s)	70
Zsp2I	ATGCAT	3 cut(s)	466, 1836, 2439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.