Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008728.1

Orthogroup ID

OG0005094

Physical Location & Seq

Genomic Coordinates Reverse (-)

72098 .. 80365

Gene Structure 8268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008728.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

atggttagtggtactttgttccattgtagaaagaattcatggcctcctcaggagtatatccccagaaacaccttacaattgatctttatatctagagatggagggagtaaaaattatgcttcagtcttggccccaggtcaacatgaaggattaggaaaagctggtgatcagggtatatcatcgtggggctggaatttgggtggtcagcattccacgtaccatgctctatttccaagggcatggactgtatatgatggcgaacctgatccagaattgaaaatttcttgtcggcaaatatcgccatttatccctcataactatagagatagtagtcttcctacagcagtttttgtttatacgttggtgaatactggaaaagaaagagcaaaagtcagcctactatttacatgggcgaattcaattggaggaacgtcacacttgtcgggagaccatgtcaatgaaccatttataggcgaagatggagtctctggtgtacttctacatcacaagactgcaaaagggagtcctcctgttacttttggaatagctgcatgtgaaacacaaaatgtaagcgttagtgttttgccgtcttttgggttatcagaaggaagtactgttacagcgaaagaaatgtgggacaaaatggtgcaggatggacaatttgatcatgagaatttcaattcggggccatgcatgtcttcatcacctggagagacactttgtgctgcagtttcagctactgcttgggtagaaccccatgggaagtgcactgttgcatttggtctatcgtggtcatccccgaaagtaaagtttttgaagggaagctcatacccaaggaggtacacaaaattctatgggacctctgaaagggcagctcaagacttggtgcatgatgcactgacaaattataagcgatgggaagaagagattgaaaattggcaaaatcctatcctcaaggatgaaaaattaccagaatggtacaagttcacgttgttcaatgagctctacttcttggtcgctggtggaacagtctggattgattctccctcactagaaacaaacatcaagaagaatcaaagtcaattaataaatggtgagtatttagataacaaggcttctgaacctaaggtgaatggcaaacaaggcggagtggtcgaggatactgcaagtgcaatatcggacctacaaaaacactatgaagatgctgggaggtttctttatctggaaggagttgaatatatcatgtggaacacatatgacgtgcacttctatgcttcatttgcccttcttgagctgtttcccaaaattgaactcaatatacaaagggactttgcaaaagcagtcttatctgaagacggaagaaaagtaaagtttctggcagaagggaattggggaattcgtaaggttagaggagctgtcccccatgatttgggaacacatgatccttggaatgaaatgaatgcgtataatattcatgatactagtaagtggaaggatctaaacccgaagtttgtacttcaggtgtatagagattttgctgcaacaggggatatgtcatttggagttgatgtctggcctgctgttcgtgcggcaatggtatacatggaacaatttgatagggacaatgatggtcttattgagaatgatggtttccctgaccagacctatgacgcttggacagttcatggagtaagtgcttactgtggttgcttgtggcttgctgcacttcaagctgctgcaacaatggcctttcaacttggtgacaaggcctttgctgaatggtgcaaaaccaaatatttgaaggccaaaccagcttttgaagaaaaactatggaatggctcttatttcaattatgatagcggatcaagtagtaacagtaaatccatacaagcagatcaactggccggacagtggtatactgcatcctcaggtttaccttcactttttgatgatgttaaaatccaaagtgctttgcagaaaatctatgattttaacgtcatgaaagttaaaggaggtgggatgggtgctgtaaatggaatgcaccctgatgggagggtggatgagtcttgtatgcagtctcgtgaaatatggactggcgtcacttatggggtggctgcaacgatgatccttgctggaaaggagaaagaggcatttaccactgctgaaggaatttttactgccggctggtctgaagagggctacggatatgcgtttcagactcctgaggggtggacgatggatggccacttccgatctctgatatatatgaggccactgtctatatggagcatgcagtgggcattatcaatgcccaaggcaattcttgaggctcctaaggccaatataatggacagaatccatatttcttctgttagttcacgatcctcccacagcgaaacagtgaagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0006082 GO:0006629 GO:0007275 GO:0007399 GO:0007417 GO:0008150 GO:0008152 GO:0008202 GO:0008206 GO:0008422 GO:0009056 GO:0009987 GO:0015926 GO:0016020 GO:0016021 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019752 GO:0021953 GO:0021954 GO:0022008 GO:0030154 GO:0030182 GO:0031224 GO:0032501 GO:0032502 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044425 GO:0048468 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0071704 GO:1901135 GO:1901136 GO:1901360 GO:1901575 GO:1901615 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

802

Amino Acids

89.35

Weight (kDa)

5.69

Isoelectric Point (pI)

43.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24180 AT3G24180
fragaria_vesca	FvH4_4g00440 FvH4_4g00440 FvH4_4g00440 FvH4_4g00440 FvH4_4g00440
malus_domestica	MD04G1004800.v1.1
prunus_persica	Prupe.1G004700_v2.0.a1 Prupe.1G004700_v2.0.a1 Prupe.1G004700_v2.0.a1
pyrus_communis	pycom04g00480
rosa_chinensis	RchiOBHm_Chr4g0385861
rosa_laevigata	RLG00000010208
rosa_multiflora	Rmu_co8376727.1_g000001 Rmu_co8521537.1_g000001 Rmu_sc0004773.1_g000004 Rmu_sc0008728.1_g000010
rosa_roxburghii	Rroxscaffold_5G00333460
rosa_rugosa	Rorug01G0169800 Rorug03G0301400 Rorug03G0301500 Rorug03G0301600 Rorug03G0301700 Rorug05G0362900
rosa_samantha	Rh4AG006800 Rh4BG004300 Rh4CG007300 Rh4DG006300
rosa_wichuraiana	Rw4G000370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	909
AccB7I	CCANNNNNTGG	1 cut(s)	1429
AccI	GTMKAC	2 cut(s)	1599, 1916
AciI	CCGC	3 cut(s)	1146, 1589, 1860
AclWI	GGATC	6 cut(s)	260, 1436, 1503, 1870, 2119, 2376
AcoI	YGGCCR	2 cut(s)	1902, 2242
AcsI	RAATTY	8 cut(s)	34, 193, 279, 415, 673, 848, 1395, 2169
AcuI	CTGAAG	5 cut(s)	105, 1371, 1502, 2184, 2211
AcyI	GRCGYC	1 cut(s)	2097
AdeI	CACNNNGTG	1 cut(s)	722
AfaI	GTAC	7 cut(s)	13, 218, 495, 613, 842, 980, 1515
AfiI	CCNNNNNNNGG	5 cut(s)	470, 593, 867, 1429, 1911
AhlI	ACTAGT	1 cut(s)	1481
AjiI	CACGTC	1 cut(s)	1261
AjnI	CCWGG	2 cut(s)	133, 706
AloI	GAACNNNNNNTCC	2 cut(s)	1426, 1458
Alw21I	GWGCWC	3 cut(s)	770, 1005, 1266
Alw26I	GTCTC	4 cut(s)	441, 490, 707, 2082
Alw44I	GTGCAC	2 cut(s)	766, 1262
AlwI	GGATC	6 cut(s)	260, 1436, 1503, 1870, 2119, 2376
AlwNI	CAGNNNCTG	1 cut(s)	740
ApaLI	GTGCAC	2 cut(s)	766, 1262
ApeKI	GCWGC	8 cut(s)	548, 725, 872, 1538, 1721, 1733, 1736, 2114
ApoI	RAATTY	8 cut(s)	34, 193, 279, 415, 673, 848, 1395, 2169
ArsI	GACNNNNNNTTYG	4 cut(s)	468, 500, 1754, 1786
AseI	ATTAAT	1 cut(s)	1085
Asp700I	GAANNNNTTC	1 cut(s)	34
AspS9I	GGNCC	4 cut(s)	130, 686, 858, 1180
AsuHPI	GGTGA	6 cut(s)	176, 376, 696, 1106, 1141, 1772
AvaII	GGWCC	2 cut(s)	858, 1180
AxyI	CCTNAGG	5 cut(s)	48, 1125, 1927, 2223, 2334
BaeGI	GKGCMC	2 cut(s)	770, 1266
BalI	TGGCCA	1 cut(s)	2244
BanII	GRGCYC	1 cut(s)	1005
BarI	GAAGNNNNNNTAC	2 cut(s)	601, 633
BauI	CACGAG	1 cut(s)	2079
BbsI	GAAGAC	3 cut(s)	326, 690, 1359
Bbv12I	GWGCWC	3 cut(s)	770, 1005, 1266
BbvI	GCAGC	8 cut(s)	535, 712, 884, 1525, 1708, 1720, 1723, 2101
BceAI	ACGGC	1 cut(s)	571
BcgI	CGANNNNNNTGC	2 cut(s)	1145, 1179
BciT130I	CCWGG	2 cut(s)	135, 708
BciVI	GTATCC	1 cut(s)	1153
BclI	TGATCA	2 cut(s)	166, 664
BcoDI	GTCTC	4 cut(s)	441, 490, 707, 2082
BcuI	ACTAGT	1 cut(s)	1481
BfaI	CTAG	3 cut(s)	93, 1052, 1482
BfmI	CTRYAG	3 cut(s)	319, 339, 726
BfuI	GTATCC	1 cut(s)	1153
BisI	GCNGC	9 cut(s)	549, 726, 873, 1539, 1590, 1722, 1734, 1737, 2115
BlsI	GCNGC	9 cut(s)	550, 727, 874, 1540, 1591, 1723, 1735, 1738, 2116
BmcAI	AGTACT	1 cut(s)	613
Bme1390I	CCNGG	2 cut(s)	135, 708
Bme18I	GGWCC	2 cut(s)	858, 1180
BmgBI	CACGTC	1 cut(s)	1261
BmgT120I	GGNCC	4 cut(s)	130, 686, 858, 1180
BmiI	GGNNCC	4 cut(s)	132, 687, 859, 2331
BmrFI	CCNGG	2 cut(s)	135, 708
BmsI	GCATC	3 cut(s)	883, 1192, 1931
BoxI	GACNNNNGTC	1 cut(s)	2096
BpiI	GAAGAC	3 cut(s)	326, 690, 1359
BpmI	CTGGAG	1 cut(s)	729
BpuEI	CTTGAG	4 cut(s)	861, 938, 1310, 2345
BsaAI	YACGTR	1 cut(s)	216
BsaHI	GRCGYC	1 cut(s)	2097
BsaI	GGTCTC	1 cut(s)	441
BsaJI	CCNNGG	6 cut(s)	133, 233, 757, 833, 1445, 2313
BsaXI	ACNNNNNCTCC	4 cut(s)	438, 468, 1554, 1584
Bsc4I	CCNNNNNNNGG	5 cut(s)	470, 593, 867, 1429, 1911
Bse118I	RCCGGY	1 cut(s)	2180
Bse1I	ACTGG	3 cut(s)	376, 1905, 2098
Bse21I	CCTNAGG	5 cut(s)	48, 1125, 1927, 2223, 2334
Bse3DI	GCAATG	1 cut(s)	1599
BseBI	CCWGG	2 cut(s)	135, 708
BseDI	CCNNGG	6 cut(s)	133, 233, 757, 833, 1445, 2313
BseGI	GGATG	7 cut(s)	658, 794, 964, 1922, 2025, 2065, 2245
BseLI	CCNNNNNNNGG	5 cut(s)	470, 593, 867, 1429, 1911
BseMI	GCAATG	1 cut(s)	1599
BseMII	CTCAG	3 cut(s)	62, 1941, 2214
BseNI	ACTGG	3 cut(s)	376, 1905, 2098
BseRI	GAGGAG	2 cut(s)	36, 1425
BseSI	GKGCMC	2 cut(s)	770, 1266
BseXI	GCAGC	8 cut(s)	535, 712, 884, 1525, 1708, 1720, 1723, 2101
BseYI	CCCAGC	1 cut(s)	1205
BsgI	GTGCAG	2 cut(s)	668, 1707
BsiHKAI	GWGCWC	3 cut(s)	770, 1005, 1266
BsiSI	CCGG	2 cut(s)	1905, 2181
BslFI	GGGAC	5 cut(s)	650, 871, 1340, 1403, 1634
BslI	CCNNNNNNNGG	5 cut(s)	470, 593, 867, 1429, 1911
BsmAI	GTCTC	4 cut(s)	441, 490, 707, 2082
BsmFI	GGGAC	5 cut(s)	650, 871, 1340, 1403, 1634
BsmI	GAATGC	3 cut(s)	208, 1465, 2043
Bso31I	GGTCTC	1 cut(s)	441
Bsp1286I	GDGCHC	3 cut(s)	770, 1005, 1266
Bsp19I	CCATGG	1 cut(s)	757
BspACI	CCGC	3 cut(s)	1146, 1589, 1860
BspCNI	CTCAG	3 cut(s)	61, 1940, 2215
BspHI	TCATGA	3 cut(s)	667, 1474, 1998
BspLI	GGNNCC	4 cut(s)	132, 687, 859, 2331
BspMAI	CTGCAG	1 cut(s)	730
BspPI	GGATC	6 cut(s)	260, 1436, 1503, 1870, 2119, 2376
BspTNI	GGTCTC	1 cut(s)	441
BsrDI	GCAATG	1 cut(s)	1599
BsrFI	RCCGGY	1 cut(s)	2180
BsrI	ACTGG	3 cut(s)	376, 1905, 2098
BssAI	RCCGGY	1 cut(s)	2180
BssECI	CCNNGG	6 cut(s)	133, 233, 757, 833, 1445, 2313
BssNAI	GTATAC	2 cut(s)	1600, 1917
BssNI	GRCGYC	1 cut(s)	2097
BssSI	CACGAG	1 cut(s)	2079
BssT1I	CCWWGG	5 cut(s)	233, 757, 833, 1445, 2313
Bst1107I	GTATAC	2 cut(s)	1600, 1917
Bst2BI	CACGAG	1 cut(s)	2079
Bst2UI	CCWGG	2 cut(s)	135, 708
Bst6I	CTCTTC	2 cut(s)	918, 2187
BstACI	GRCGYC	1 cut(s)	2097
BstBAI	YACGTR	1 cut(s)	216
BstC8I	GCNNGC	4 cut(s)	1578, 1719, 2182, 2291
BstDEI	CTNAG	5 cut(s)	48, 1125, 1927, 2223, 2334
BstDSI	CCRYGG	1 cut(s)	757
BstENI	CCTNNNNNAGG	1 cut(s)	865
BstF5I	GGATG	7 cut(s)	658, 794, 964, 1922, 2025, 2065, 2245
BstMAI	GTCTC	4 cut(s)	441, 490, 707, 2082
BstMWI	GCNNNNNNNGC	9 cut(s)	298, 734, 1143, 1280, 1586, 1730, 1745, 1811, 2336
BstNI	CCWGG	2 cut(s)	135, 708
BstNSI	RCATGY	3 cut(s)	555, 697, 2293
BstPAI	GACNNNNGTC	1 cut(s)	2096
BstSCI	CCNGG	2 cut(s)	133, 706
BstSFI	CTRYAG	3 cut(s)	319, 339, 726
BstSLI	GKGCMC	2 cut(s)	770, 1266
BstV1I	GCAGC	8 cut(s)	535, 712, 884, 1525, 1708, 1720, 1723, 2101
BstV2I	GAAGAC	3 cut(s)	326, 690, 1359
BstX2I	RGATCY	1 cut(s)	1495
BstXI	CCANNNNNNTGG	2 cut(s)	240, 2347
BstYI	RGATCY	1 cut(s)	1495
BstZ17I	GTATAC	2 cut(s)	1600, 1917
Bsu36I	CCTNAGG	5 cut(s)	48, 1125, 1927, 2223, 2334
BsuI	GTATCC	1 cut(s)	1153
BtgI	CCRYGG	1 cut(s)	757
BtgZI	GCGATG	1 cut(s)	928
BtrI	CACGTC	1 cut(s)	1261
BtsCI	GGATG	7 cut(s)	658, 794, 964, 1922, 2025, 2065, 2245
BtsI	GCAGTG	2 cut(s)	2157, 2300
BtsIMutI	CAGTG	7 cut(s)	768, 896, 1916, 2157, 2273, 2300, 2406
Cac8I	GCNNGC	4 cut(s)	1578, 1719, 2182, 2291
CaiI	CAGNNNCTG	1 cut(s)	740
CciI	TCATGA	3 cut(s)	667, 1474, 1998
Cfr10I	RCCGGY	1 cut(s)	2180
Cfr13I	GGNCC	4 cut(s)	130, 686, 858, 1180
CseI	GACGC	2 cut(s)	1679, 2086
Csp6I	GTAC	7 cut(s)	12, 217, 494, 612, 841, 979, 1514
CviQI	GTAC	7 cut(s)	12, 217, 494, 612, 841, 979, 1514
DdeI	CTNAG	5 cut(s)	48, 1125, 1927, 2223, 2334
DraIII	CACNNNGTG	1 cut(s)	722
EaeI	YGGCCR	2 cut(s)	1902, 2242
Eam1104I	CTCTTC	2 cut(s)	918, 2187
EarI	CTCTTC	2 cut(s)	918, 2187
EciI	GGCGGA	1 cut(s)	1161
Ecl136II	GAGCTC	1 cut(s)	1003
Eco130I	CCWWGG	5 cut(s)	233, 757, 833, 1445, 2313
Eco147I	AGGCCT	1 cut(s)	1769
Eco24I	GRGCYC	1 cut(s)	1005
Eco31I	GGTCTC	1 cut(s)	441
Eco47I	GGWCC	2 cut(s)	858, 1180
Eco53kI	GAGCTC	1 cut(s)	1003
Eco57I	CTGAAG	5 cut(s)	105, 1371, 1502, 2184, 2211
Eco81I	CCTNAGG	5 cut(s)	48, 1125, 1927, 2223, 2334
EcoICRI	GAGCTC	1 cut(s)	1003
EcoNI	CCTNNNNNAGG	1 cut(s)	865
EcoO109I	RGGNCCY	1 cut(s)	858
EcoRI	GAATTC	3 cut(s)	34, 415, 1395
EcoRII	CCWGG	2 cut(s)	133, 706
EcoT14I	CCWWGG	5 cut(s)	233, 757, 833, 1445, 2313
EcoT22I	ATGCAT	1 cut(s)	695
EcoT38I	GRGCYC	1 cut(s)	1005
ErhI	CCWWGG	5 cut(s)	233, 757, 833, 1445, 2313
FaqI	GGGAC	5 cut(s)	650, 871, 1340, 1403, 1634
FauNDI	CATATG	1 cut(s)	1255
FbaI	TGATCA	2 cut(s)	166, 664
FblI	GTMKAC	2 cut(s)	1599, 1916
Fnu4HI	GCNGC	9 cut(s)	549, 726, 873, 1539, 1590, 1722, 1734, 1737, 2115
FokI	GGATG	7 cut(s)	665, 781, 971, 1909, 2032, 2072, 2252
FriOI	GRGCYC	1 cut(s)	1005
Fsp4HI	GCNGC	9 cut(s)	549, 726, 873, 1539, 1590, 1722, 1734, 1737, 2115
FspBI	CTAG	3 cut(s)	93, 1052, 1482
GluI	GCNGC	9 cut(s)	549, 726, 873, 1539, 1590, 1722, 1734, 1737, 2115
GsaI	CCCAGC	1 cut(s)	1209
GsuI	CTGGAG	1 cut(s)	729
HapII	CCGG	2 cut(s)	1905, 2181
HgaI	GACGC	2 cut(s)	1679, 2086
Hin1I	GRCGYC	1 cut(s)	2097
HincII	GTYRAC	1 cut(s)	140
HindII	GTYRAC	1 cut(s)	140
HinfI	GANTC	7 cut(s)	483, 523, 1040, 1072, 2063, 2218, 2355
HpaII	CCGG	2 cut(s)	1905, 2181
HphI	GGTGA	6 cut(s)	176, 376, 696, 1106, 1141, 1772
Hpy188I	TCNGA	9 cut(s)	604, 865, 1120, 1180, 1351, 2191, 2217, 2252, 2259
HpyCH4IV	ACGT	6 cut(s)	215, 359, 431, 989, 1260, 1995
HpyF10VI	GCNNNNNNNGC	9 cut(s)	298, 734, 1143, 1280, 1586, 1730, 1745, 1811, 2336
HpyF3I	CTNAG	5 cut(s)	48, 1125, 1927, 2223, 2334
HpySE526I	ACGT	6 cut(s)	215, 359, 431, 989, 1260, 1995
Hsp92I	GRCGYC	1 cut(s)	2097
KroI	GCCGGC	1 cut(s)	2180
KroNI	GCCGGC	1 cut(s)	2182
Ksp22I	TGATCA	2 cut(s)	166, 664
LmnI	GCTCC	3 cut(s)	1412, 2286, 2335
Lsp1109I	GCAGC	8 cut(s)	535, 712, 884, 1525, 1708, 1720, 1723, 2101
LweI	GCATC	3 cut(s)	883, 1192, 1931
MaeI	CTAG	3 cut(s)	93, 1052, 1482
MaeII	ACGT	6 cut(s)	215, 359, 431, 989, 1260, 1995
MaeIII	GTNAC	6 cut(s)	432, 532, 616, 1760, 1871, 2098
MfeI	CAATTG	2 cut(s)	77, 420
MflI	RGATCY	1 cut(s)	1495
MhlI	GDGCHC	3 cut(s)	770, 1005, 1266
MlsI	TGGCCA	1 cut(s)	2244
MluNI	TGGCCA	1 cut(s)	2244
MlyI	GAGTC	4 cut(s)	492, 532, 2072, 2212
Mox20I	TGGCCA	1 cut(s)	2244
Mph1103I	ATGCAT	1 cut(s)	695
MroNI	GCCGGC	1 cut(s)	2180
MroXI	GAANNNNTTC	1 cut(s)	34
MscI	TGGCCA	1 cut(s)	2244
MseI	TTAA	4 cut(s)	1085, 1956, 1992, 2007
MslI	CAYNNNNRTG	3 cut(s)	456, 1269, 2046
Msp20I	TGGCCA	1 cut(s)	2244
MspI	CCGG	2 cut(s)	1905, 2181
MspR9I	CCNGG	2 cut(s)	135, 708
MunI	CAATTG	2 cut(s)	77, 420
Mva1269I	GAATGC	3 cut(s)	208, 1465, 2043
MvaI	CCWGG	2 cut(s)	135, 708
MwoI	GCNNNNNNNGC	9 cut(s)	298, 734, 1143, 1280, 1586, 1730, 1745, 1811, 2336
NaeI	GCCGGC	1 cut(s)	2182
NcoI	CCATGG	1 cut(s)	757
NdeI	CATATG	1 cut(s)	1255
NgoMIV	GCCGGC	1 cut(s)	2180
NlaIV	GGNNCC	4 cut(s)	132, 687, 859, 2331
NmuCI	GTSAC	3 cut(s)	432, 1760, 2098
NsiI	ATGCAT	1 cut(s)	695
NspI	RCATGY	3 cut(s)	555, 697, 2293
PaeI	GCATGC	1 cut(s)	2293
PagI	TCATGA	3 cut(s)	667, 1474, 1998
PceI	AGGCCT	1 cut(s)	1769
PctI	GAATGC	3 cut(s)	208, 1465, 2043
PdiI	GCCGGC	1 cut(s)	2182
PdmI	GAANNNNTTC	1 cut(s)	34
PfeI	GAWTC	3 cut(s)	1040, 1072, 2355
PflFI	GACNNNGTC	1 cut(s)	452
PflMI	CCANNNNNTGG	1 cut(s)	1429
PkrI	GCNGC	9 cut(s)	550, 727, 874, 1540, 1591, 1723, 1735, 1738, 2116
PleI	GAGTC	4 cut(s)	491, 531, 2071, 2212
PpsI	GAGTC	4 cut(s)	491, 531, 2071, 2212
Ppu21I	YACGTR	1 cut(s)	216
PpuMI	RGGWCCY	1 cut(s)	858
PshAI	GACNNNNGTC	1 cut(s)	2096
PshBI	ATTAAT	1 cut(s)	1085
PsiI	TTATAA	1 cut(s)	909
Psp124BI	GAGCTC	1 cut(s)	1005
Psp5II	RGGWCCY	1 cut(s)	858
Psp6I	CCWGG	2 cut(s)	133, 706
PspFI	CCCAGC	1 cut(s)	1205
PspGI	CCWGG	2 cut(s)	133, 706
PspN4I	GGNNCC	4 cut(s)	132, 687, 859, 2331
PspPI	GGNCC	4 cut(s)	130, 686, 858, 1180
PspPPI	RGGWCCY	1 cut(s)	858
PsrI	GAACNNNNNNTAC	2 cut(s)	1302, 1334
PstI	CTGCAG	1 cut(s)	730
PstNI	CAGNNNCTG	1 cut(s)	740
PsuI	RGATCY	1 cut(s)	1495
PsyI	GACNNNGTC	1 cut(s)	452
RsaI	GTAC	7 cut(s)	13, 218, 495, 613, 842, 980, 1515
RsaNI	GTAC	7 cut(s)	12, 217, 494, 612, 841, 979, 1514
RseI	CAYNNNNRTG	3 cut(s)	456, 1269, 2046
SacI	GAGCTC	1 cut(s)	1005
SaqAI	TTAA	4 cut(s)	1085, 1956, 1992, 2007
SatI	GCNGC	9 cut(s)	549, 726, 873, 1539, 1590, 1722, 1734, 1737, 2115
Sau96I	GGNCC	4 cut(s)	130, 686, 858, 1180
ScaI	AGTACT	1 cut(s)	613
SchI	GAGTC	4 cut(s)	492, 532, 2072, 2212
ScrFI	CCNGG	2 cut(s)	135, 708
SduI	GDGCHC	3 cut(s)	770, 1005, 1266
SfaNI	GCATC	3 cut(s)	883, 1192, 1931
SfcI	CTRYAG	3 cut(s)	319, 339, 726
SinI	GGWCC	2 cut(s)	858, 1180
SmiMI	CAYNNNNRTG	3 cut(s)	456, 1269, 2046
SmlI	CTYRAG	4 cut(s)	876, 953, 1289, 2324
SmoI	CTYRAG	4 cut(s)	876, 953, 1289, 2324
SpeI	ACTAGT	1 cut(s)	1481
SphI	GCATGC	1 cut(s)	2293
SseBI	AGGCCT	1 cut(s)	1769
SsiI	CCGC	3 cut(s)	1146, 1589, 1860
SspI	AATATT	2 cut(s)	1471, 1796
SspMI	CTAG	3 cut(s)	93, 1052, 1482
SstI	GAGCTC	1 cut(s)	1005
StuI	AGGCCT	1 cut(s)	1769
StyD4I	CCNGG	2 cut(s)	133, 706
StyI	CCWWGG	5 cut(s)	233, 757, 833, 1445, 2313
TaiI	ACGT	6 cut(s)	218, 362, 434, 992, 1263, 1998
TaqI	TCGA	1 cut(s)	1155
TatI	WGTACW	3 cut(s)	493, 611, 1513
TauI	GCSGC	1 cut(s)	1592
TfiI	GAWTC	3 cut(s)	1040, 1072, 2355
Tru1I	TTAA	4 cut(s)	1085, 1956, 1992, 2007
Tru9I	TTAA	4 cut(s)	1085, 1956, 1992, 2007
TscAI	CASTG	7 cut(s)	775, 903, 1916, 2164, 2280, 2300, 2406
TseFI	GTSAC	3 cut(s)	432, 1760, 2098
TseI	GCWGC	8 cut(s)	548, 725, 872, 1538, 1721, 1733, 1736, 2114
Tsp45I	GTSAC	3 cut(s)	432, 1760, 2098
TspGWI	ACGGA	2 cut(s)	1371, 2217
TspRI	CASTG	7 cut(s)	775, 903, 1916, 2164, 2280, 2300, 2406
Tth111I	GACNNNGTC	1 cut(s)	452
Van91I	CCANNNNNTGG	1 cut(s)	1429
VneI	GTGCAC	2 cut(s)	766, 1262
VpaK11BI	GGWCC	2 cut(s)	858, 1180
VspI	ATTAAT	1 cut(s)	1085
XagI	CCTNNNNNAGG	1 cut(s)	865
XapI	RAATTY	8 cut(s)	34, 193, 279, 415, 673, 848, 1395, 2169
XbaI	TCTAGA	1 cut(s)	92
XceI	RCATGY	3 cut(s)	555, 697, 2293
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2280
XmiI	GTMKAC	2 cut(s)	1599, 1916
XmnI	GAANNNNTTC	1 cut(s)	34
XspI	CTAG	3 cut(s)	93, 1052, 1482
ZrmI	AGTACT	1 cut(s)	613
Zsp2I	ATGCAT	1 cut(s)	695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.