Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014115

Physical Location & Seq

Genomic Coordinates Forward (+)

9532613 .. 9535629

Gene Structure 3017 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G26090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGCGAGTGGATGTGCTCTACATGGTGGTTGTCCCAGCGATTACGTCGCCGTCGCAATTTCAGTCATCTGCTTCTTCGTGCTGTTATCGCGCTCAGTGTTACCGTGTTTGATTCATAAGGCTCCTCGTACTAACAGTAGCAGTTTCTGGATCCCTGTTATTCAAGTTATCTCCAGCTTCAACCTTCTCTTCTCAATTATGATGTCAGTTAATTTGCTTCGATTCAGGACGAAACATTGGTGGCGATATTGCTATCTTTGGGCAGTGTGGATTGAAGGACCACTTGGGTTTGGTTTGTTGATGAGCTGCCGTATAACTCAGGCATTTCAACTATACTTCATATTTGTCAAGAAACGTCTACCTCCGGTAAAATCATACATTTTCCTCCCCCTTGTTTTGTTGCCATGGATCTTCGGAGCTGCAATTATCCACGCAACAAAGCCTCTCAACGATAAATGCCACATGGGTCTTCAATGGACTTTCCCAGTTGCAGGCCTTCATGCTCTCTATGTCCTTGCTTTAATTGCATTCACAAGAGCAGTTCGACATGTAGAGTTTCGTTTTGACGAGCTTAGAGATCTCTGGAAAGGAATTCTCGTCTCAGCCACTTCAATCGTTATATGGGTAACAGCGTTTGTGTTGAATGAGATTCATGAAGAAATCTCTTGGCTTCAGGTTGCTTCAAGATTTGTGCTTTTAGTCACGGGTGGGATTCTCGTCGTTGTCTTCTTTTCCATCTCGAGTAACCAACCTCTTCTTTCACAAATCAGCTTGAAGAAAAGACAAAACTTTGAGTTTCAAAGAATGGGTCAAGCTCTAGGCATTCCCGATAGCGGATTATTATTTCGGAAGGAGGAGTTTCGACCTGTTGACCCAAACGAGCCACTCGATAAGCTTCTTCTCAATAAAAGATTTCGCCATTCGTTTATGGAATTTGCTGATAGCTGCTACGCTGGAGAAACATTGCATTTTTTTGAAGAGGTGTATGAACATGGTAAAATCCCGGAAGATGATTCGATAAGAAGAATCTACATGGCTCGACATATCATGGAGAAGTTCATCGTCGCAGGAGCGGAAATGGAATTGAACTTATCTCATAAAACCCGACAAGAGATCTTAACCACTCAAGATCTAACTCACACTGATCTCTTCAAGAACGCATTAAACGAAGTCATGCAATTGATCAAGATGAACTTGGTAAGAGATTACTGGTCATCCATCTACTTCATCAAGTTCAAAGAAGAAGAAAGCTGCCACGAGGCAATGCATAAGGAAGGATACAGTTTTTCATCTCCAAGACTGAGTTCAGTTCAAGGCTCTGATGATCCTTTCTATCAAGAACATATGTCAAAGAGTTCCAGATGCAGTAGTCCCGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0004930 GO:0005096 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006950 GO:0007154 GO:0007165 GO:0007186 GO:0008047 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009756 GO:0009987 GO:0010008 GO:0010033 GO:0010035 GO:0010182 GO:0012505 GO:0016020 GO:0023052 GO:0030234 GO:0030695 GO:0031090 GO:0031410 GO:0031982 GO:0033993 GO:0034284 GO:0038023 GO:0042127 GO:0042221 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0044093 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051336 GO:0051345 GO:0051716 GO:0060089 GO:0060589 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071322 GO:0071944 GO:0097305 GO:0097708 GO:0098588 GO:0098772 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RGS

Protein Analysis

459

Amino Acids

52.95

Weight (kDa)

8.58

Isoelectric Point (pI)

50.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RGS	PF00615	296 - 411	2.5e-13	Regulator of G protein signaling domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014115)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26090 AT3G26090
fragaria_vesca	FvH4_4g24980
malus_domestica	MD13G1107500.v1.1 MD16G1107500.v1.1
prunus_persica	Prupe.1G238900_v2.0.a1
pyrus_communis	pycom13g09310 pycom16g09160
rosa_chinensis	RchiOBHm_Chr4g0432041
rosa_laevigata	RLG00000006867
rosa_multiflora	Rmu_sc0004965.1_g000023
rosa_roxburghii	Rroxscaffold_5G00373590
rosa_rugosa	Rorug04G0254400
rosa_samantha	Rh4AG311700 Rh4BG318900 Rh4CG334400
rosa_wichuraiana	Rw4G027100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1073
AccI	GTMKAC	1 cut(s)	358
AccII	CGCG	1 cut(s)	91
AciI	CCGC	2 cut(s)	834, 1073
AclWI	GGATC	4 cut(s)	145, 158, 416, 1319
AcsI	RAATTY	2 cut(s)	591, 932
AcuI	CTGAAG	1 cut(s)	656
AfaI	GTAC	1 cut(s)	130
AfiI	CCNNNNNNNGG	2 cut(s)	491, 833
AflIII	ACRYGT	1 cut(s)	547
AjuI	GAANNNNNNNTTGG	4 cut(s)	267, 299, 1288, 1320
AluBI	AGCT	9 cut(s)	177, 306, 419, 571, 771, 815, 895, 945, 1251
AluI	AGCT	9 cut(s)	177, 306, 419, 571, 771, 815, 895, 945, 1251
Alw21I	GWGCWC	1 cut(s)	19
Alw26I	GTCTC	1 cut(s)	604
AlwI	GGATC	4 cut(s)	145, 158, 416, 1319
AlwNI	CAGNNNCTG	1 cut(s)	147
Ama87I	CYCGRG	1 cut(s)	739
AoxI	GGCC	1 cut(s)	493
ApeKI	GCWGC	4 cut(s)	306, 419, 945, 1251
ApoI	RAATTY	2 cut(s)	591, 932
ArsI	GACNNNNNNTTYG	2 cut(s)	793, 825
AspLEI	GCGC	1 cut(s)	93
AspS9I	GGNCC	1 cut(s)	278
AsuC2I	CCSGG	2 cut(s)	1004, 1374
AvaI	CYCGRG	1 cut(s)	739
AvaII	GGWCC	1 cut(s)	278
BamHI	GGATCC	1 cut(s)	150
BauI	CACGAG	1 cut(s)	1256
BbsI	GAAGAC	2 cut(s)	461, 718
Bbv12I	GWGCWC	1 cut(s)	19
BbvI	GCAGC	4 cut(s)	293, 406, 932, 1238
BccI	CCATC	2 cut(s)	743, 1226
BceAI	ACGGC	2 cut(s)	35, 294
BciVI	GTATCC	1 cut(s)	1271
BclI	TGATCA	1 cut(s)	1182
BcnI	CCSGG	2 cut(s)	1004, 1374
BcoDI	GTCTC	1 cut(s)	604
BfaI	CTAG	1 cut(s)	818
BfuI	GTATCC	1 cut(s)	1271
BglII	AGATCT	3 cut(s)	577, 1113, 1129
BisI	GCNGC	4 cut(s)	307, 420, 946, 1252
BlsI	GCNGC	4 cut(s)	308, 421, 947, 1253
Bme1390I	CCNGG	2 cut(s)	1004, 1374
Bme18I	GGWCC	1 cut(s)	278
BmeT110I	CYCGRG	1 cut(s)	739
BmgT120I	GGNCC	1 cut(s)	278
BmiI	GGNNCC	2 cut(s)	123, 152
BmrFI	CCNGG	2 cut(s)	1004, 1374
BmrI	ACTGGG	1 cut(s)	479
BmsI	GCATC	1 cut(s)	1352
BmuI	ACTGGG	1 cut(s)	479
BpiI	GAAGAC	2 cut(s)	461, 718
BpmI	CTGGAG	2 cut(s)	157, 975
BpuEI	CTTGAG	1 cut(s)	1110
BpuMI	CCSGG	2 cut(s)	1004, 1374
BsaJI	CCNNGG	1 cut(s)	404
BsaWI	WCCGGW	1 cut(s)	364
Bsc4I	CCNNNNNNNGG	2 cut(s)	491, 833
Bse1I	ACTGG	2 cut(s)	485, 1214
Bse3DI	GCAATG	2 cut(s)	962, 1269
BseDI	CCNNGG	1 cut(s)	404
BseGI	GGATG	2 cut(s)	17, 1214
BseLI	CCNNNNNNNGG	2 cut(s)	491, 833
BseMI	GCAATG	2 cut(s)	962, 1269
BseMII	CTCAG	4 cut(s)	108, 332, 615, 1292
BseNI	ACTGG	2 cut(s)	485, 1214
BseRI	GAGGAG	2 cut(s)	114, 869
BseXI	GCAGC	4 cut(s)	293, 406, 932, 1238
BseYI	CCCAGC	1 cut(s)	35
Bsh1236I	CGCG	1 cut(s)	91
BshFI	GGCC	1 cut(s)	495
BsiHKAI	GWGCWC	1 cut(s)	19
BsiHKCI	CYCGRG	1 cut(s)	739
BsiSI	CCGG	3 cut(s)	365, 1004, 1374
BslFI	GGGAC	2 cut(s)	18, 1356
BslI	CCNNNNNNNGG	2 cut(s)	491, 833
BsmAI	GTCTC	1 cut(s)	604
BsmBI	CGTCTC	1 cut(s)	604
BsmFI	GGGAC	2 cut(s)	18, 1356
BsmI	GAATGC	2 cut(s)	527, 822
BsnI	GGCC	1 cut(s)	495
BsoBI	CYCGRG	1 cut(s)	739
Bsp1286I	GDGCHC	1 cut(s)	19
Bsp143I	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
Bsp19I	CCATGG	1 cut(s)	404
BspACI	CCGC	2 cut(s)	834, 1073
BspANI	GGCC	1 cut(s)	495
BspCNI	CTCAG	4 cut(s)	107, 331, 614, 1293
BspFNI	CGCG	1 cut(s)	91
BspHI	TCATGA	1 cut(s)	652
BspLI	GGNNCC	2 cut(s)	123, 152
BspPI	GGATC	4 cut(s)	145, 158, 416, 1319
BsrBI	CCGCTC	1 cut(s)	1073
BsrDI	GCAATG	2 cut(s)	962, 1269
BsrI	ACTGG	2 cut(s)	485, 1214
BssECI	CCNNGG	1 cut(s)	404
BssMI	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
BssSI	CACGAG	1 cut(s)	1256
BssT1I	CCWWGG	1 cut(s)	404
Bst2BI	CACGAG	1 cut(s)	1256
Bst4CI	ACNGT	3 cut(s)	105, 137, 1283
Bst6I	CTCTTC	4 cut(s)	194, 759, 972, 1154
BstC8I	GCNNGC	1 cut(s)	493
BstDEI	CTNAG	5 cut(s)	94, 318, 572, 601, 1301
BstDSI	CCRYGG	1 cut(s)	404
BstF5I	GGATG	2 cut(s)	17, 1214
BstFNI	CGCG	1 cut(s)	91
BstHHI	GCGC	1 cut(s)	93
BstKTI	GATC	8 cut(s)	153, 411, 580, 1116, 1132, 1147, 1185, 1327
BstMAI	GTCTC	1 cut(s)	604
BstMBI	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
BstMWI	GCNNNNNNNGC	2 cut(s)	88, 524
BstNSI	RCATGY	1 cut(s)	551
BstSCI	CCNGG	2 cut(s)	1002, 1372
BstUI	CGCG	1 cut(s)	91
BstV1I	GCAGC	4 cut(s)	293, 406, 932, 1238
BstV2I	GAAGAC	2 cut(s)	461, 718
BstX2I	RGATCY	5 cut(s)	150, 408, 577, 1113, 1129
BstYI	RGATCY	5 cut(s)	150, 408, 577, 1113, 1129
BsuI	GTATCC	1 cut(s)	1271
BsuRI	GGCC	1 cut(s)	495
BtgI	CCRYGG	1 cut(s)	404
BtsCI	GGATG	2 cut(s)	17, 1214
BtsI	GCAGTG	1 cut(s)	270
BtsIMutI	CAGTG	3 cut(s)	102, 270, 1140
Cac8I	GCNNGC	1 cut(s)	493
CaiI	CAGNNNCTG	1 cut(s)	147
CciI	TCATGA	1 cut(s)	652
CfoI	GCGC	1 cut(s)	93
Cfr13I	GGNCC	1 cut(s)	278
Csp6I	GTAC	1 cut(s)	129
CviQI	GTAC	1 cut(s)	129
DdeI	CTNAG	5 cut(s)	94, 318, 572, 601, 1301
DpnI	GATC	8 cut(s)	152, 410, 579, 1115, 1131, 1146, 1184, 1326
DpnII	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
Eam1104I	CTCTTC	4 cut(s)	194, 759, 972, 1154
EarI	CTCTTC	4 cut(s)	194, 759, 972, 1154
Eco130I	CCWWGG	1 cut(s)	404
Eco147I	AGGCCT	1 cut(s)	495
Eco47I	GGWCC	1 cut(s)	278
Eco57I	CTGAAG	1 cut(s)	656
Eco88I	CYCGRG	1 cut(s)	739
EcoRI	GAATTC	1 cut(s)	591
EcoT14I	CCWWGG	1 cut(s)	404
EcoT22I	ATGCAT	1 cut(s)	1269
ErhI	CCWWGG	1 cut(s)	404
Esp3I	CGTCTC	1 cut(s)	604
FalI	AAGNNNNNCTT	4 cut(s)	267, 299, 1178, 1210
FaqI	GGGAC	2 cut(s)	18, 1356
FauNDI	CATATG	1 cut(s)	1344
FbaI	TGATCA	1 cut(s)	1182
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	4 cut(s)	307, 420, 946, 1252
FokI	GGATG	2 cut(s)	24, 1201
Fsp4HI	GCNGC	4 cut(s)	307, 420, 946, 1252
FspBI	CTAG	1 cut(s)	818
GlaI	GCGC	1 cut(s)	92
GluI	GCNGC	4 cut(s)	307, 420, 946, 1252
GsaI	CCCAGC	1 cut(s)	39
GsuI	CTGGAG	2 cut(s)	157, 975
HaeIII	GGCC	1 cut(s)	495
HapII	CCGG	3 cut(s)	365, 1004, 1374
HhaI	GCGC	1 cut(s)	93
Hin6I	GCGC	1 cut(s)	91
HinP1I	GCGC	1 cut(s)	91
HincII	GTYRAC	1 cut(s)	871
HindII	GTYRAC	1 cut(s)	871
HindIII	AAGCTT	1 cut(s)	893
HinfI	GANTC	6 cut(s)	112, 222, 649, 712, 1013, 1026
HpaII	CCGG	3 cut(s)	365, 1004, 1374
Hpy166II	GTNNAC	2 cut(s)	359, 871
Hpy188I	TCNGA	3 cut(s)	416, 849, 1321
Hpy8I	GTNNAC	2 cut(s)	359, 871
Hpy99I	CGWCG	4 cut(s)	50, 56, 722, 1067
HpyAV	CCTTC	5 cut(s)	194, 269, 506, 844, 1268
HpyCH4III	ACNGT	3 cut(s)	105, 137, 1283
HpyCH4IV	ACGT	2 cut(s)	45, 355
HpyCH4V	TGCA	7 cut(s)	422, 491, 527, 967, 1177, 1267, 1365
HpyF10VI	GCNNNNNNNGC	2 cut(s)	88, 524
HpyF3I	CTNAG	5 cut(s)	94, 318, 572, 601, 1301
HpySE526I	ACGT	2 cut(s)	45, 355
HspAI	GCGC	1 cut(s)	91
Ksp22I	TGATCA	1 cut(s)	1182
Kzo9I	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
LmnI	GCTCC	3 cut(s)	127, 416, 1070
Lsp1109I	GCAGC	4 cut(s)	293, 406, 932, 1238
LweI	GCATC	1 cut(s)	1352
MaeI	CTAG	1 cut(s)	818
MaeII	ACGT	2 cut(s)	45, 355
MaeIII	GTNAC	4 cut(s)	99, 625, 700, 743
MalI	GATC	8 cut(s)	152, 410, 579, 1115, 1131, 1146, 1184, 1326
MbiI	CCGCTC	1 cut(s)	1073
MboI	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
MfeI	CAATTG	1 cut(s)	1178
MflI	RGATCY	5 cut(s)	150, 408, 577, 1113, 1129
MhlI	GDGCHC	1 cut(s)	19
MluCI	AATT	9 cut(s)	57, 195, 211, 423, 522, 591, 932, 1082, 1178
MnlI	CCTC	8 cut(s)	135, 372, 395, 453, 762, 847, 973, 1252
Mph1103I	ATGCAT	1 cut(s)	1269
MseI	TTAA	5 cut(s)	210, 521, 1118, 1163, 1378
MspI	CCGG	3 cut(s)	365, 1004, 1374
MspR9I	CCNGG	2 cut(s)	1004, 1374
MunI	CAATTG	1 cut(s)	1178
Mva1269I	GAATGC	2 cut(s)	527, 822
MvnI	CGCG	1 cut(s)	91
MwoI	GCNNNNNNNGC	2 cut(s)	88, 524
NciI	CCSGG	2 cut(s)	1004, 1374
NcoI	CCATGG	1 cut(s)	404
NdeI	CATATG	1 cut(s)	1344
NdeII	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
NlaIV	GGNNCC	2 cut(s)	123, 152
NmuCI	GTSAC	1 cut(s)	700
NsiI	ATGCAT	1 cut(s)	1269
NspI	RCATGY	1 cut(s)	551
PaeR7I	CTCGAG	1 cut(s)	739
PagI	TCATGA	1 cut(s)	652
PceI	AGGCCT	1 cut(s)	495
PciI	ACATGT	1 cut(s)	547
PcsI	WCGNNNNNNNCGW	2 cut(s)	885, 1164
PctI	GAATGC	2 cut(s)	527, 822
PfeI	GAWTC	6 cut(s)	112, 222, 649, 712, 1013, 1026
PfoI	TCCNGGA	1 cut(s)	1002
PkrI	GCNGC	4 cut(s)	308, 421, 947, 1253
PscI	ACATGT	1 cut(s)	547
PspFI	CCCAGC	1 cut(s)	35
PspN4I	GGNNCC	2 cut(s)	123, 152
PspPI	GGNCC	1 cut(s)	278
PstNI	CAGNNNCTG	1 cut(s)	147
PsuI	RGATCY	5 cut(s)	150, 408, 577, 1113, 1129
RsaI	GTAC	1 cut(s)	130
RsaNI	GTAC	1 cut(s)	129
SaqAI	TTAA	5 cut(s)	210, 521, 1118, 1163, 1378
SatI	GCNGC	4 cut(s)	307, 420, 946, 1252
Sau3AI	GATC	8 cut(s)	150, 408, 577, 1113, 1129, 1144, 1182, 1324
Sau96I	GGNCC	1 cut(s)	278
ScrFI	CCNGG	2 cut(s)	1004, 1374
SduI	GDGCHC	1 cut(s)	19
SfaNI	GCATC	1 cut(s)	1352
Sfr274I	CTCGAG	1 cut(s)	739
SinI	GGWCC	1 cut(s)	278
SlaI	CTCGAG	1 cut(s)	739
SmlI	CTYRAG	2 cut(s)	739, 1125
SmoI	CTYRAG	2 cut(s)	739, 1125
Sse9I	AATT	9 cut(s)	57, 195, 211, 423, 522, 591, 932, 1082, 1178
SseBI	AGGCCT	1 cut(s)	495
SsiI	CCGC	2 cut(s)	834, 1073
SspMI	CTAG	1 cut(s)	818
StuI	AGGCCT	1 cut(s)	495
StyD4I	CCNGG	2 cut(s)	1002, 1372
StyI	CCWWGG	1 cut(s)	404
TaaI	ACNGT	3 cut(s)	105, 137, 1283
TaiI	ACGT	2 cut(s)	48, 358
TaqI	TCGA	7 cut(s)	220, 544, 740, 862, 888, 1016, 1039
TasI	AATT	9 cut(s)	57, 195, 211, 423, 522, 591, 932, 1082, 1178
TfiI	GAWTC	6 cut(s)	112, 222, 649, 712, 1013, 1026
Tru1I	TTAA	5 cut(s)	210, 521, 1118, 1163, 1378
Tru9I	TTAA	5 cut(s)	210, 521, 1118, 1163, 1378
TscAI	CASTG	3 cut(s)	102, 270, 1147
TseFI	GTSAC	1 cut(s)	700
TseI	GCWGC	4 cut(s)	306, 419, 945, 1251
Tsp45I	GTSAC	1 cut(s)	700
TspRI	CASTG	3 cut(s)	102, 270, 1147
VpaK11BI	GGWCC	1 cut(s)	278
XapI	RAATTY	2 cut(s)	591, 932
XceI	RCATGY	1 cut(s)	551
XhoI	CTCGAG	1 cut(s)	739
XmiI	GTMKAC	1 cut(s)	358
XspI	CTAG	1 cut(s)	818
Zsp2I	ATGCAT	1 cut(s)	1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.