MD16G1107500.v1.1

Regulator of G-protein signaling

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
7525789 .. 7530136
4348 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1107500.v1.1.491

Sequence Viewer

Length: 1569 bp
ATGGAAGGGATGGAAACTAGGAGGGCAGACAATCTTGGTCCCAAAACATCACGTGCGAAAGTCAAGCTGCCATTGTCCGATGGCTTGCACTGCACAGAAAAAGGACTCACCTTGAAGCTGATGACTTGGTGGGCGGGGCGTCCTAAAATCTTCTGGTTTCGGATCCTAAAAACGTACTGGGTGAACCCGAATACCCCAAATGCAAAGAAAATGGTAAGCTGCGCCGTGGAAGGTGGCTGTGCCAGCGACTACTTAGCCGTAGCCATATCGGCCGTCTGTTTCATTCTGCTTCTTTCACGGGTAATCTTACCCTTTGCCGTTCACAAAATTCCTCTTCCGAAACGCAGTAGCTTTTGGATTCCAGTGATTCAAATTTACGCCAGCTTCAACCTTTTGTTGTCGCTTGTGATGTCTCTCAATTTTCTGAAATTCGAGAAGACATATTGGTGGCAGTCTTGCTATCTTTGGGCAGTCTGGATTGGAGCTCCTCTTGGCTTTGGTTTACTACTTAGCTGCCGCATATCACAGGCCTTTCAACTGTATTACATTTTTGTAAAGAGGTGTCTACCACCAATCAGATCTTATATTTTTCTTCCACTAATTCTCTTGCCATGGTTTGCTTGGGCTGCTTTGATCCACATCAAAAGGCCTCTAAATCATCGATGTCACGTGGGAACTCAGTGGATCATCCCAGACATGTCCCTCCACGCACTATATGTTGCCATTTTGGTAGGATTCACGGGGGCTATTCGGCATATAGAGTTCAGGTTTGACGAACTTAGAGATCTCTGGCAGGGAATACTTGTATCAGCCTCTTCTATTGGAGTATGGGTTGTTGCTCACATTTTGAATGAAATTCATGATGATATCTCTGGGCTTCAAGTTGCCTCTAGATTTGTGCTCTTAGTTACGGCAAGCATTCTTGTGTTAGCTTTATTTTCGATATCAAGTTCACAACCTCTTCTATCACAAATCAGCTTGAGGAAAAGGGAGCCCCTATCATTTGAGACAATGGGTAAGGCTCTGGGCATACCTAACAGTGGAATGCTATTGCCAAGGGAACCAGCACCTGTGGTGGATCCTAATGAACCACTTGATAAACTTCTTATGAACAAAATATTTCGTCAGTCCTTCATGGAATTTGCAAACAGTTGTTTGGCAGGGGAGAGTGTCCATTTTTATGAGGAAGTGCATGAACTTGGTAAAATACCAGCGGATGATCCTGTAAGAAGGATTTACATGGCACGGCATATCATTGACAAATACATAATTGCAGGTGCAGCAATGGAGGTGAACATTTCTCACCGAAGCAGACAAGCAATTTTGACTACTTCCAATCTGGCACAACCAAATCTTTTTAATGATGCTTTAAATGAGCTGATACAGCTGATGAAAACGAGCTTGGCAAAAGATTTCTGGTCATCCATATACTCCATTAAGTTCAAAGAAGAAGCCAGTATGAGATCTCATGAGCTGGAACAGATGACAAGTTGGAACCCCTCTCCCACTCCTAGGTTGAGTTCTGTACGTGGCGTTGATGATCCATTTCACCAAGAACAAGAATCATGA

Protein Analysis

523

Amino Acids

59.34

Weight (kDa)

9.15

Isoelectric Point (pI)

51.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RGS PF00615 365 - 477 3.6e-12 Regulator of G protein signaling domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G26090 AT3G26090
fragaria_vesca FvH4_4g24980
malus_domestica MD13G1107500.v1.1 MD16G1107500.v1.1
prunus_persica Prupe.1G238900_v2.0.a1
pyrus_communis pycom13g09310 pycom16g09160
rosa_chinensis RchiOBHm_Chr4g0432041
rosa_laevigata RLG00000006867
rosa_multiflora Rmu_sc0004965.1_g000023
rosa_roxburghii Rroxscaffold_5G00373590
rosa_rugosa Rorug04G0254400
rosa_samantha Rh4AG311700 Rh4BG318900 Rh4CG334400
rosa_wichuraiana Rw4G027100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1265
Acc36I ACCTGC 1 cut(s) 1265
AccI GTMKAC 1 cut(s) 565
AciI CCGC 3 cut(s) 134, 517, 1214
AclWI GGATC 8 cut(s) 157, 170, 628, 692, 1073, 1086, 1214, 1535
AcoI YGGCCR 1 cut(s) 270
AcsI RAATTY 5 cut(s) 327, 372, 428, 855, 1139
AcvI CACGTG 2 cut(s) 53, 670
AcyI GRCGYC 1 cut(s) 139
AfaI GTAC 2 cut(s) 176, 1527
AfiI CCNNNNNNNGG 2 cut(s) 1040, 1512
AflIII ACRYGT 1 cut(s) 696
AgsI TTSAA 7 cut(s) 115, 371, 388, 536, 850, 881, 1444
AjuI GAANNNNNNNTTGG 2 cut(s) 1385, 1417
Alw21I GWGCWC 2 cut(s) 487, 903
Alw26I GTCTC 2 cut(s) 417, 1001
AlwI GGATC 8 cut(s) 157, 170, 628, 692, 1073, 1086, 1214, 1535
AlwNI CAGNNNCTG 1 cut(s) 1070
AoxI GGCC 3 cut(s) 270, 528, 647
ApeKI GCWGC 5 cut(s) 67, 219, 513, 626, 1280
ApoI RAATTY 5 cut(s) 327, 372, 428, 855, 1139
AspA2I CCTAGG 1 cut(s) 1511
AspLEI GCGC 1 cut(s) 224
AspS9I GGNCC 1 cut(s) 38
AsuHPI GGTGA 5 cut(s) 100, 193, 1295, 1303, 1541
AvaII GGWCC 1 cut(s) 38
AvrII CCTAGG 1 cut(s) 1511
BamHI GGATCC 2 cut(s) 162, 1078
BanII GRGCYC 2 cut(s) 487, 996
BbrPI CACGTG 2 cut(s) 53, 670
BbsI GAAGAC 1 cut(s) 443
Bbv12I GWGCWC 2 cut(s) 487, 903
BbvI GCAGC 5 cut(s) 54, 206, 500, 613, 1292
BccI CCATC 2 cut(s) 4, 74
BceAI ACGGC 6 cut(s) 209, 242, 257, 302, 927, 1262
BcoDI GTCTC 2 cut(s) 417, 1001
BfaI CTAG 3 cut(s) 18, 891, 1512
BfuAI ACCTGC 1 cut(s) 1265
BglI GCCNNNNNGGC 1 cut(s) 269
BglII AGATCT 3 cut(s) 578, 784, 1463
BisI GCNGC 6 cut(s) 68, 220, 514, 517, 627, 1281
BlnI CCTAGG 1 cut(s) 1511
BlsI GCNGC 6 cut(s) 69, 221, 515, 518, 628, 1282
Bme18I GGWCC 1 cut(s) 38
BmgT120I GGNCC 1 cut(s) 38
BmiI GGNNCC 6 cut(s) 40, 164, 993, 1062, 1080, 1496
BmrI ACTGGG 1 cut(s) 187
BmsI GCATC 1 cut(s) 1354
BmuI ACTGGG 1 cut(s) 187
BpiI GAAGAC 1 cut(s) 443
BpuEI CTTGAG 1 cut(s) 1000
Bsa29I ATCGAT 1 cut(s) 661
BsaAI YACGTR 3 cut(s) 53, 670, 1529
BsaBI GATNNNNATC 1 cut(s) 638
BsaHI GRCGYC 1 cut(s) 139
BsaJI CCNNGG 4 cut(s) 225, 611, 1055, 1511
BsaXI ACNNNNNCTCC 2 cut(s) 816, 846
Bsc4I CCNNNNNNNGG 2 cut(s) 1040, 1512
Bse1I ACTGG 3 cut(s) 182, 362, 1455
Bse3DI GCAATG 1 cut(s) 1290
Bse8I GATNNNNATC 1 cut(s) 638
BseCI ATCGAT 1 cut(s) 661
BseDI CCNNGG 4 cut(s) 225, 611, 1055, 1511
BseGI GGATG 4 cut(s) 15, 687, 1222, 1421
BseJI GATNNNNATC 1 cut(s) 638
BseLI CCNNNNNNNGG 2 cut(s) 1040, 1512
BseMI GCAATG 1 cut(s) 1290
BseMII CTCAG 1 cut(s) 692
BseNI ACTGG 3 cut(s) 182, 362, 1455
BseRI GAGGAG 1 cut(s) 477
BseX3I CGGCCG 1 cut(s) 270
BseXI GCAGC 5 cut(s) 54, 206, 500, 613, 1292
BsgI GTGCAG 2 cut(s) 76, 1299
Bsh1285I CGRYCG 1 cut(s) 273
BshFI GGCC 3 cut(s) 272, 530, 649
BshVI ATCGAT 1 cut(s) 661
BsiEI CGRYCG 1 cut(s) 273
BsiHKAI GWGCWC 2 cut(s) 487, 903
BslFI GGGAC 2 cut(s) 24, 685
BslI CCNNNNNNNGG 2 cut(s) 1040, 1512
BsmAI GTCTC 2 cut(s) 417, 1001
BsmFI GGGAC 2 cut(s) 24, 685
BsmI GAATGC 2 cut(s) 918, 1050
BsnI GGCC 3 cut(s) 272, 530, 649
Bsp1286I GDGCHC 3 cut(s) 487, 903, 996
Bsp143I GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
Bsp19I CCATGG 1 cut(s) 611
BspACI CCGC 3 cut(s) 134, 517, 1214
BspANI GGCC 3 cut(s) 272, 530, 649
BspCNI CTCAG 1 cut(s) 691
BspDI ATCGAT 1 cut(s) 661
BspHI TCATGA 3 cut(s) 859, 1468, 1565
BspLI GGNNCC 6 cut(s) 40, 164, 993, 1062, 1080, 1496
BspMI ACCTGC 1 cut(s) 1265
BspPI GGATC 8 cut(s) 157, 170, 628, 692, 1073, 1086, 1214, 1535
BsrDI GCAATG 1 cut(s) 1290
BsrI ACTGG 3 cut(s) 182, 362, 1455
BssECI CCNNGG 4 cut(s) 225, 611, 1055, 1511
BssMI GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
BssNI GRCGYC 1 cut(s) 139
BssT1I CCWWGG 3 cut(s) 611, 1055, 1511
Bst4CI ACNGT 3 cut(s) 540, 1040, 1151
Bst6I CTCTTC 3 cut(s) 339, 820, 966
BstACI GRCGYC 1 cut(s) 139
BstBAI YACGTR 3 cut(s) 53, 670, 1529
BstC8I GCNNGC 4 cut(s) 86, 244, 382, 916
BstDEI CTNAG 5 cut(s) 253, 509, 678, 779, 904
BstDSI CCRYGG 2 cut(s) 225, 611
BstF5I GGATG 4 cut(s) 15, 687, 1222, 1421
BstHHI GCGC 1 cut(s) 224
BstKTI GATC 9 cut(s) 165, 581, 636, 687, 787, 1081, 1222, 1466, 1543
BstMAI GTCTC 2 cut(s) 417, 1001
BstMBI GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
BstMCI CGRYCG 1 cut(s) 273
BstMWI GCNNNNNNNGC 6 cut(s) 90, 243, 269, 626, 1280, 1384
BstNSI RCATGY 1 cut(s) 700
BstV1I GCAGC 5 cut(s) 54, 206, 500, 613, 1292
BstV2I GAAGAC 1 cut(s) 443
BstX2I RGATCY 5 cut(s) 162, 578, 784, 1078, 1463
BstYI RGATCY 5 cut(s) 162, 578, 784, 1078, 1463
BstZI CGGCCG 1 cut(s) 270
Bsu15I ATCGAT 1 cut(s) 661
BsuRI GGCC 3 cut(s) 272, 530, 649
BsuTUI ATCGAT 1 cut(s) 661
BtgI CCRYGG 2 cut(s) 225, 611
BtsCI GGATG 4 cut(s) 15, 687, 1222, 1421
BtsI GCAGTG 1 cut(s) 88
BtsIMutI CAGTG 4 cut(s) 88, 369, 686, 1045
BveI ACCTGC 1 cut(s) 1265
Cac8I GCNNGC 4 cut(s) 86, 244, 382, 916
CaiI CAGNNNCTG 1 cut(s) 1070
CciI TCATGA 3 cut(s) 859, 1468, 1565
CfoI GCGC 1 cut(s) 224
Cfr13I GGNCC 1 cut(s) 38
ClaI ATCGAT 1 cut(s) 661
CseI GACGC 1 cut(s) 128
Csp6I GTAC 2 cut(s) 175, 1526
CviAII CATG 8 cut(s) 612, 697, 860, 1135, 1193, 1240, 1469, 1566
CviQI GTAC 2 cut(s) 175, 1526
DdeI CTNAG 5 cut(s) 253, 509, 678, 779, 904
DpnI GATC 9 cut(s) 164, 580, 635, 686, 786, 1080, 1221, 1465, 1542
DpnII GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
DraI TTTAAA 1 cut(s) 1371
EaeI YGGCCR 1 cut(s) 270
EagI CGGCCG 1 cut(s) 270
Eam1104I CTCTTC 3 cut(s) 339, 820, 966
EarI CTCTTC 3 cut(s) 339, 820, 966
Ecl136II GAGCTC 1 cut(s) 485
EclXI CGGCCG 1 cut(s) 270
Eco130I CCWWGG 3 cut(s) 611, 1055, 1511
Eco147I AGGCCT 2 cut(s) 530, 649
Eco24I GRGCYC 2 cut(s) 487, 996
Eco32I GATATC 2 cut(s) 868, 945
Eco47I GGWCC 1 cut(s) 38
Eco52I CGGCCG 1 cut(s) 270
Eco53kI GAGCTC 1 cut(s) 485
Eco72I CACGTG 2 cut(s) 53, 670
EcoICRI GAGCTC 1 cut(s) 485
EcoRV GATATC 2 cut(s) 868, 945
EcoT14I CCWWGG 3 cut(s) 611, 1055, 1511
EcoT38I GRGCYC 2 cut(s) 487, 996
ErhI CCWWGG 3 cut(s) 611, 1055, 1511
FaeI CATG 8 cut(s) 615, 700, 863, 1138, 1196, 1243, 1472, 1569
FaqI GGGAC 2 cut(s) 24, 685
FatI CATG 8 cut(s) 611, 696, 859, 1134, 1192, 1239, 1468, 1565
FauI CCCGC 1 cut(s) 127
FblI GTMKAC 1 cut(s) 565
Fnu4HI GCNGC 6 cut(s) 68, 220, 514, 517, 627, 1281
FokI GGATG 4 cut(s) 22, 674, 1229, 1408
FriOI GRGCYC 2 cut(s) 487, 996
Fsp4HI GCNGC 6 cut(s) 68, 220, 514, 517, 627, 1281
FspBI CTAG 3 cut(s) 18, 891, 1512
GlaI GCGC 1 cut(s) 223
GluI GCNGC 6 cut(s) 68, 220, 514, 517, 627, 1281
HaeIII GGCC 3 cut(s) 272, 530, 649
HgaI GACGC 1 cut(s) 128
HhaI GCGC 1 cut(s) 224
Hin1I GRCGYC 1 cut(s) 139
Hin1II CATG 8 cut(s) 615, 700, 863, 1138, 1196, 1243, 1472, 1569
Hin6I GCGC 1 cut(s) 222
HinP1I GCGC 1 cut(s) 222
HinfI GANTC 5 cut(s) 105, 358, 367, 735, 1562
HphI GGTGA 5 cut(s) 100, 193, 1295, 1303, 1541
Hpy166II GTNNAC 6 cut(s) 184, 322, 503, 566, 953, 1294
Hpy188I TCNGA 5 cut(s) 79, 162, 339, 426, 578
Hpy188III TCNNGA 6 cut(s) 433, 475, 860, 891, 1469, 1566
Hpy8I GTNNAC 6 cut(s) 184, 322, 503, 566, 953, 1294
HpyAV CCTTC 3 cut(s) 224, 1141, 1224
HpyCH4III ACNGT 3 cut(s) 540, 1040, 1151
HpyCH4IV ACGT 4 cut(s) 52, 173, 669, 1528
HpyCH4V TGCA 7 cut(s) 88, 93, 203, 1145, 1192, 1274, 1280
HpyF10VI GCNNNNNNNGC 6 cut(s) 90, 243, 269, 626, 1280, 1384
HpyF3I CTNAG 5 cut(s) 253, 509, 678, 779, 904
HpySE526I ACGT 4 cut(s) 52, 173, 669, 1528
Hsp92I GRCGYC 1 cut(s) 139
Hsp92II CATG 8 cut(s) 615, 700, 863, 1138, 1196, 1243, 1472, 1569
HspAI GCGC 1 cut(s) 222
Kzo9I GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
LmnI GCTCC 3 cut(s) 482, 490, 991
Lsp1109I GCAGC 5 cut(s) 54, 206, 500, 613, 1292
LweI GCATC 1 cut(s) 1354
MaeI CTAG 3 cut(s) 18, 891, 1512
MaeII ACGT 4 cut(s) 52, 173, 669, 1528
MaeIII GTNAC 2 cut(s) 665, 907
MalI GATC 9 cut(s) 164, 580, 635, 686, 786, 1080, 1221, 1465, 1542
MboI GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
MboII GAAGA 7 cut(s) 142, 326, 448, 584, 807, 953, 1460
MflI RGATCY 5 cut(s) 162, 578, 784, 1078, 1463
MhlI GDGCHC 3 cut(s) 487, 903, 996
MluCI AATT 9 cut(s) 327, 372, 418, 428, 600, 855, 1139, 1269, 1320
MlyI GAGTC 1 cut(s) 99
MmeI TCCRAC 1 cut(s) 1472
MseI TTAA 3 cut(s) 1359, 1370, 1437
MslI CAYNNNNRTG 3 cut(s) 445, 923, 1179
MspA1I CMGCKG 2 cut(s) 1214, 1387
Mva1269I GAATGC 2 cut(s) 918, 1050
MwoI GCNNNNNNNGC 6 cut(s) 90, 243, 269, 626, 1280, 1384
NcoI CCATGG 1 cut(s) 611
NdeII GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
NlaIII CATG 8 cut(s) 615, 700, 863, 1138, 1196, 1243, 1472, 1569
NlaIV GGNNCC 6 cut(s) 40, 164, 993, 1062, 1080, 1496
NmuCI GTSAC 1 cut(s) 665
NspI RCATGY 1 cut(s) 700
PagI TCATGA 3 cut(s) 859, 1468, 1565
PaqCI CACCTGC 1 cut(s) 1265
PceI AGGCCT 2 cut(s) 530, 649
PciI ACATGT 1 cut(s) 696
PctI GAATGC 2 cut(s) 918, 1050
PfeI GAWTC 4 cut(s) 358, 367, 735, 1562
PkrI GCNGC 6 cut(s) 69, 221, 515, 518, 628, 1282
PleI GAGTC 1 cut(s) 99
PmaCI CACGTG 2 cut(s) 53, 670
PmlI CACGTG 2 cut(s) 53, 670
PpsI GAGTC 1 cut(s) 99
Ppu21I YACGTR 3 cut(s) 53, 670, 1529
PscI ACATGT 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 487
PspCI CACGTG 2 cut(s) 53, 670
PspN4I GGNNCC 6 cut(s) 40, 164, 993, 1062, 1080, 1496
PspPI GGNCC 1 cut(s) 38
PstNI CAGNNNCTG 1 cut(s) 1070
PsuI RGATCY 5 cut(s) 162, 578, 784, 1078, 1463
PvuII CAGCTG 1 cut(s) 1387
RsaI GTAC 2 cut(s) 176, 1527
RsaNI GTAC 2 cut(s) 175, 1526
RseI CAYNNNNRTG 3 cut(s) 445, 923, 1179
SacI GAGCTC 1 cut(s) 487
SaqAI TTAA 3 cut(s) 1359, 1370, 1437
SatI GCNGC 6 cut(s) 68, 220, 514, 517, 627, 1281
Sau3AI GATC 9 cut(s) 162, 578, 633, 684, 784, 1078, 1219, 1463, 1540
Sau96I GGNCC 1 cut(s) 38
SchI GAGTC 1 cut(s) 99
SduI GDGCHC 3 cut(s) 487, 903, 996
SfaNI GCATC 1 cut(s) 1354
SinI GGWCC 1 cut(s) 38
SmiMI CAYNNNNRTG 3 cut(s) 445, 923, 1179
SmlI CTYRAG 1 cut(s) 979
SmoI CTYRAG 1 cut(s) 979
Sse9I AATT 9 cut(s) 327, 372, 418, 428, 600, 855, 1139, 1269, 1320
SseBI AGGCCT 2 cut(s) 530, 649
SsiI CCGC 3 cut(s) 134, 517, 1214
SspI AATATT 1 cut(s) 1119
SspMI CTAG 3 cut(s) 18, 891, 1512
SstI GAGCTC 1 cut(s) 487
StuI AGGCCT 2 cut(s) 530, 649
StyI CCWWGG 3 cut(s) 611, 1055, 1511
TaaI ACNGT 3 cut(s) 540, 1040, 1151
TaiI ACGT 4 cut(s) 55, 176, 672, 1531
TaqI TCGA 3 cut(s) 432, 661, 941
TasI AATT 9 cut(s) 327, 372, 418, 428, 600, 855, 1139, 1269, 1320
TauI GCSGC 1 cut(s) 519
TfiI GAWTC 4 cut(s) 358, 367, 735, 1562
Tru1I TTAA 3 cut(s) 1359, 1370, 1437
Tru9I TTAA 3 cut(s) 1359, 1370, 1437
TscAI CASTG 4 cut(s) 95, 369, 686, 1045
TseFI GTSAC 1 cut(s) 665
TseI GCWGC 5 cut(s) 67, 219, 513, 626, 1280
Tsp45I GTSAC 1 cut(s) 665
TspDTI ATGAA 8 cut(s) 271, 848, 867, 1101, 1123, 1124, 1209, 1406
TspRI CASTG 4 cut(s) 95, 369, 686, 1045
VpaK11BI GGWCC 1 cut(s) 38
XapI RAATTY 5 cut(s) 327, 372, 428, 855, 1139
XbaI TCTAGA 1 cut(s) 890
XceI RCATGY 1 cut(s) 700
XcmI CCANNNNNNNNNTGG 1 cut(s) 618
XmaJI CCTAGG 1 cut(s) 1511
XmiI GTMKAC 1 cut(s) 565
XspI CTAG 3 cut(s) 18, 891, 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.