Rorug04G0254400

Regulator of G-protein signaling

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
42742859 .. 42743128
270 bp
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UTR
Exon/CDS
Intron
Rorug04G0254400.1

Sequence Viewer

Length: 270 bp
ATGGGGTTTAAAGACTTACATATGTTTAATCTTGCTATGCCGGCAAAACAAGGCTGGTGTTTTGTAAAGAATCTAGACTCTCTTATTGCTCAGGTGTACAAGGCTGCGTATTTCCCAAATTGTTCTTTATGGGAAGCTACATTGGAACAACAACCTTCTTTCTCATGGAGAAGTATTATGGAGGCTAGGAGTGTTTTACAGGTGGGCATGCGTTGGATGGTTGGAAATGGTGCTGCAATAGATATTTGGCGACATCAATGGCTCCCATAA

Protein Analysis

89

Amino Acids

10.35

Weight (kDa)

8.74

Isoelectric Point (pI)

53.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014115)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G26090 AT3G26090
fragaria_vesca FvH4_4g24980
malus_domestica MD13G1107500.v1.1 MD16G1107500.v1.1
prunus_persica Prupe.1G238900_v2.0.a1
pyrus_communis pycom13g09310 pycom16g09160
rosa_chinensis RchiOBHm_Chr4g0432041
rosa_laevigata RLG00000006867
rosa_multiflora Rmu_sc0004965.1_g000023
rosa_roxburghii Rroxscaffold_5G00373590
rosa_rugosa Rorug04G0254400
rosa_samantha Rh4AG311700 Rh4BG318900 Rh4CG334400
rosa_wichuraiana Rw4G027100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 98
AluBI AGCT 1 cut(s) 137
AluI AGCT 1 cut(s) 137
ApeKI GCWGC 2 cut(s) 104, 233
BbvI GCAGC 2 cut(s) 91, 220
BccI CCATC 1 cut(s) 211
BfaI CTAG 2 cut(s) 74, 186
BisI GCNGC 2 cut(s) 105, 234
BlsI GCNGC 2 cut(s) 106, 235
BmiI GGNNCC 1 cut(s) 263
Bpu10I CCTNAGC 1 cut(s) 90
Bse118I RCCGGY 1 cut(s) 40
BseGI GGATG 1 cut(s) 222
BseMII CTCAG 1 cut(s) 104
BseXI GCAGC 2 cut(s) 91, 220
BsiSI CCGG 1 cut(s) 41
Bsp1407I TGTACA 1 cut(s) 96
BspCNI CTCAG 1 cut(s) 103
BspLI GGNNCC 1 cut(s) 263
BsrFI RCCGGY 1 cut(s) 40
BsrGI TGTACA 1 cut(s) 96
BssAI RCCGGY 1 cut(s) 40
BstAUI TGTACA 1 cut(s) 96
BstC8I GCNNGC 2 cut(s) 42, 209
BstDEI CTNAG 1 cut(s) 90
BstF5I GGATG 1 cut(s) 222
BstMWI GCNNNNNNNGC 1 cut(s) 41
BstNSI RCATGY 1 cut(s) 211
BstV1I GCAGC 2 cut(s) 91, 220
BtsCI GGATG 1 cut(s) 222
Cac8I GCNNGC 2 cut(s) 42, 209
Cfr10I RCCGGY 1 cut(s) 40
Csp6I GTAC 1 cut(s) 97
CviAII CATG 2 cut(s) 165, 208
CviJI RGCY 5 cut(s) 54, 104, 137, 185, 262
CviKI_1 RGCY 5 cut(s) 54, 104, 137, 185, 262
CviQI GTAC 1 cut(s) 97
DdeI CTNAG 1 cut(s) 90
DraI TTTAAA 1 cut(s) 10
FaeI CATG 2 cut(s) 168, 211
FaiI YATR 8 cut(s) 21, 23, 38, 130, 166, 179, 209, 268
FatI CATG 2 cut(s) 164, 207
FauNDI CATATG 1 cut(s) 21
Fnu4HI GCNGC 2 cut(s) 105, 234
FokI GGATG 1 cut(s) 229
Fsp4HI GCNGC 2 cut(s) 105, 234
FspBI CTAG 2 cut(s) 74, 186
GluI GCNGC 2 cut(s) 105, 234
HapII CCGG 1 cut(s) 41
Hin1II CATG 2 cut(s) 168, 211
HinfI GANTC 2 cut(s) 70, 77
HpaII CCGG 1 cut(s) 41
Hpy166II GTNNAC 1 cut(s) 97
Hpy188III TCNNGA 1 cut(s) 74
Hpy8I GTNNAC 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 165
HpyCH4V TGCA 1 cut(s) 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 41
HpyF3I CTNAG 1 cut(s) 90
Hsp92II CATG 2 cut(s) 168, 211
KroI GCCGGC 1 cut(s) 40
KroNI GCCGGC 1 cut(s) 42
LmnI GCTCC 1 cut(s) 267
LpnPI CCDG 4 cut(s) 40, 54, 77, 185
Lsp1109I GCAGC 2 cut(s) 91, 220
MaeI CTAG 2 cut(s) 74, 186
MluCI AATT 1 cut(s) 118
MlyI GAGTC 1 cut(s) 71
MmeI TCCRAC 2 cut(s) 194, 202
MnlI CCTC 1 cut(s) 175
MroNI GCCGGC 1 cut(s) 40
MseI TTAA 2 cut(s) 9, 27
MspI CCGG 1 cut(s) 41
MwoI GCNNNNNNNGC 1 cut(s) 41
NaeI GCCGGC 1 cut(s) 42
NdeI CATATG 1 cut(s) 21
NgoMIV GCCGGC 1 cut(s) 40
NlaIII CATG 2 cut(s) 168, 211
NlaIV GGNNCC 1 cut(s) 263
NspI RCATGY 1 cut(s) 211
PaeI GCATGC 1 cut(s) 211
PdiI GCCGGC 1 cut(s) 42
PfeI GAWTC 1 cut(s) 70
PkrI GCNGC 2 cut(s) 106, 235
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
PspN4I GGNNCC 1 cut(s) 263
RsaI GTAC 1 cut(s) 98
RsaNI GTAC 1 cut(s) 97
SaqAI TTAA 2 cut(s) 9, 27
SatI GCNGC 2 cut(s) 105, 234
SchI GAGTC 1 cut(s) 71
SetI ASST 4 cut(s) 96, 139, 157, 204
SphI GCATGC 1 cut(s) 211
Sse9I AATT 1 cut(s) 118
SspMI CTAG 2 cut(s) 74, 186
TasI AATT 1 cut(s) 118
TatI WGTACW 1 cut(s) 96
TfiI GAWTC 1 cut(s) 70
Tru1I TTAA 2 cut(s) 9, 27
Tru9I TTAA 2 cut(s) 9, 27
TseI GCWGC 2 cut(s) 104, 233
XbaI TCTAGA 1 cut(s) 73
XceI RCATGY 1 cut(s) 211
XspI CTAG 2 cut(s) 74, 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.