AT3G26934

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
9927523 .. 9929269
1747 bp
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UTR
Exon/CDS
Intron
AT3G26934.1

Sequence Viewer

Length: 462 bp
ATGGGTTGTGGTGTTTCAAGGCCGGAGACAGATGAAGGACGACAAGAAGGATCTCGGCTAGGATCTATCGGTAAAGATAGCGAAACTGCTGATAGTTTCATATCCGATAAAGAGATTCTTGAGATATCTACCGATAGTAAAAGTTCCAAAACCAATGGTGAAAATACAACGAGTAGTAAAGAGGAGGAAAATGAATGGAAAGATGATGGACAAGAGAAAGGAGACGAGCTAAAACATTCACCTGAATCTCCGAGTTTTCGAATTTATTGTGTTTTCCCTAGAAATCCTAATGATGACATCGTTGATGATTTGCAACGGAACAAGAACATATCAGACGAAAACAAGGAGCAGAAAGTAAAGAGGCAAGAAGCAGTAGGATTGAAAATAAGAAGAAGATTTAACAATGTCAAGAAGCTTCTAAGCCCTCCGACTGTACCTTCCTCCACAGCTAACCGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

153

Amino Acids

17.19

Weight (kDa)

5.24

Isoelectric Point (pI)

63.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014047)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 454
AclWI GGATC 2 cut(s) 58, 70
AcsI RAATTY 1 cut(s) 261
AfaI GTAC 1 cut(s) 435
AgsI TTSAA 2 cut(s) 18, 382
AluBI AGCT 3 cut(s) 229, 415, 449
AluI AGCT 3 cut(s) 229, 415, 449
Alw26I GTCTC 2 cut(s) 20, 216
AlwI GGATC 2 cut(s) 58, 70
AoxI GGCC 1 cut(s) 20
ApoI RAATTY 1 cut(s) 261
AsuHPI GGTGA 2 cut(s) 170, 231
AsuII TTCGAA 1 cut(s) 259
BccI CCATC 1 cut(s) 200
BcoDI GTCTC 2 cut(s) 20, 216
BfaI CTAG 2 cut(s) 59, 279
Bpu14I TTCGAA 1 cut(s) 259
BpuEI CTTGAG 1 cut(s) 140
BseRI GAGGAG 1 cut(s) 197
BshFI GGCC 1 cut(s) 22
BsiSI CCGG 1 cut(s) 23
BsmAI GTCTC 2 cut(s) 20, 216
BsmBI CGTCTC 1 cut(s) 216
BsnI GGCC 1 cut(s) 22
Bsp119I TTCGAA 1 cut(s) 259
Bsp143I GATC 2 cut(s) 50, 62
BspACI CCGC 1 cut(s) 454
BspANI GGCC 1 cut(s) 22
BspPI GGATC 2 cut(s) 58, 70
BspT104I TTCGAA 1 cut(s) 259
BssMI GATC 2 cut(s) 50, 62
Bst4CI ACNGT 1 cut(s) 433
BstBI TTCGAA 1 cut(s) 259
BstDEI CTNAG 1 cut(s) 419
BstKTI GATC 2 cut(s) 53, 65
BstMAI GTCTC 2 cut(s) 20, 216
BstMBI GATC 2 cut(s) 50, 62
BstX2I RGATCY 2 cut(s) 50, 62
BstYI RGATCY 2 cut(s) 50, 62
BsuRI GGCC 1 cut(s) 22
Csp6I GTAC 1 cut(s) 434
CviJI RGCY 6 cut(s) 22, 58, 229, 415, 423, 449
CviKI_1 RGCY 6 cut(s) 22, 58, 229, 415, 423, 449
CviQI GTAC 1 cut(s) 434
DdeI CTNAG 1 cut(s) 419
DpnI GATC 2 cut(s) 52, 64
DpnII GATC 2 cut(s) 50, 62
Eco32I GATATC 1 cut(s) 126
EcoRV GATATC 1 cut(s) 126
Esp3I CGTCTC 1 cut(s) 216
FaiI YATR 2 cut(s) 101, 329
FalI AAGNNNNNCTT 2 cut(s) 102, 134
FspBI CTAG 2 cut(s) 59, 279
HaeIII GGCC 1 cut(s) 22
HapII CCGG 1 cut(s) 23
HindIII AAGCTT 1 cut(s) 413
HinfI GANTC 2 cut(s) 115, 245
HpaII CCGG 1 cut(s) 23
HphI GGTGA 2 cut(s) 170, 231
Hpy188I TCNGA 4 cut(s) 106, 252, 334, 429
Hpy188III TCNNGA 2 cut(s) 119, 409
HpyAV CCTTC 3 cut(s) 29, 41, 447
HpyCH4III ACNGT 1 cut(s) 433
HpyCH4V TGCA 1 cut(s) 313
HpyF3I CTNAG 1 cut(s) 419
Kzo9I GATC 2 cut(s) 50, 62
LmnI GCTCC 1 cut(s) 346
LpnPI CCDG 2 cut(s) 36, 255
MaeI CTAG 2 cut(s) 59, 279
MalI GATC 2 cut(s) 52, 64
MboI GATC 2 cut(s) 50, 62
MboII GAAGA 2 cut(s) 402, 405
MflI RGATCY 2 cut(s) 50, 62
MluCI AATT 1 cut(s) 261
MmeI TCCRAC 1 cut(s) 452
MnlI CCTC 5 cut(s) 175, 178, 354, 435, 451
MseI TTAA 1 cut(s) 399
MspI CCGG 1 cut(s) 23
NdeII GATC 2 cut(s) 50, 62
NmeAIII GCCGAG 1 cut(s) 34
NspV TTCGAA 1 cut(s) 259
PfeI GAWTC 2 cut(s) 115, 245
PsuI RGATCY 2 cut(s) 50, 62
RsaI GTAC 1 cut(s) 435
RsaNI GTAC 1 cut(s) 434
SaqAI TTAA 1 cut(s) 399
Sau3AI GATC 2 cut(s) 50, 62
SetI ASST 5 cut(s) 231, 244, 417, 439, 451
SfuI TTCGAA 1 cut(s) 259
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
Sse9I AATT 1 cut(s) 261
SsiI CCGC 1 cut(s) 454
SspMI CTAG 2 cut(s) 59, 279
TaaI ACNGT 1 cut(s) 433
TaqI TCGA 1 cut(s) 259
TasI AATT 1 cut(s) 261
TfiI GAWTC 2 cut(s) 115, 245
Tru1I TTAA 1 cut(s) 399
Tru9I TTAA 1 cut(s) 399
TspDTI ATGAA 3 cut(s) 48, 88, 207
TspGWI ACGGA 1 cut(s) 331
XapI RAATTY 1 cut(s) 261
XspI CTAG 2 cut(s) 59, 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.