Protease Do-like 1, chloroplastic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27925 AT3G27925 |
| fragaria_vesca | FvH4_6g50761 |
| malus_domestica | MD09G1032500.v1.1 MD17G1034100.v1.1 |
| prunus_persica | Prupe.3G285500_v2.0.a1 |
| pyrus_communis | pycom111g02590 pycom17g03150 |
| rosa_chinensis | RchiOBHm_Chr2g0171711 |
| rosa_laevigata | RLG00000022031 |
| rosa_multiflora | Rmu_co8512701.1_g000001 Rmu_ssc0000252.1_g000013 |
| rosa_roxburghii | Rroxscaffold_2G00080500 |
| rosa_rugosa | Rorug02G0555500 Rorug02G0555500 |
| rosa_samantha | Rh2BG641100 Rh2BG643600 Rh2CG609300 Rh2DG652000 Rh2DG657300 |
| rosa_wichuraiana | Rw2G052190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 752 |
| Acc65I | GGTACC | 1 cut(s) | 454 |
| AccB1I | GGYRCC | 1 cut(s) | 454 |
| AccBSI | CCGCTC | 1 cut(s) | 1059 |
| AccII | CGCG | 3 cut(s) | 263, 359, 431 |
| AciI | CCGC | 5 cut(s) | 225, 285, 294, 846, 1059 |
| AclI | AACGTT | 1 cut(s) | 875 |
| AclWI | GGATC | 3 cut(s) | 96, 126, 934 |
| AcoI | YGGCCR | 1 cut(s) | 688 |
| AcsI | RAATTY | 1 cut(s) | 1019 |
| AcuI | CTGAAG | 1 cut(s) | 1097 |
| AfaI | GTAC | 6 cut(s) | 253, 328, 456, 1149, 1180, 1208 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 604, 1010, 1088 |
| AflIII | ACRYGT | 1 cut(s) | 429 |
| AgsI | TTSAA | 5 cut(s) | 85, 302, 344, 377, 803 |
| AhlI | ACTAGT | 1 cut(s) | 1144 |
| AjiI | CACGTC | 1 cut(s) | 1167 |
| AjnI | CCWGG | 1 cut(s) | 835 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 128, 160 |
| AleI | CACNNNNGTG | 1 cut(s) | 1169 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 374, 406 |
| AluBI | AGCT | 4 cut(s) | 163, 355, 867, 976 |
| AluI | AGCT | 4 cut(s) | 163, 355, 867, 976 |
| Alw21I | GWGCWC | 2 cut(s) | 357, 1068 |
| Alw26I | GTCTC | 5 cut(s) | 180, 673, 1135, 1149, 1192 |
| AlwI | GGATC | 3 cut(s) | 96, 126, 934 |
| AoxI | GGCC | 1 cut(s) | 688 |
| ApeKI | GCWGC | 2 cut(s) | 782, 824 |
| ApoI | RAATTY | 1 cut(s) | 1019 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 36, 352, 384 |
| Asp718I | GGTACC | 1 cut(s) | 454 |
| AspS9I | GGNCC | 3 cut(s) | 851, 1030, 1091 |
| AsuHPI | GGTGA | 5 cut(s) | 62, 988, 991, 1183, 1255 |
| AvaII | GGWCC | 3 cut(s) | 851, 1030, 1091 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1170, 1203 |
| BalI | TGGCCA | 1 cut(s) | 690 |
| BanI | GGYRCC | 1 cut(s) | 454 |
| BanII | GRGCYC | 1 cut(s) | 357 |
| Bbv12I | GWGCWC | 2 cut(s) | 357, 1068 |
| BbvI | GCAGC | 2 cut(s) | 769, 836 |
| BccI | CCATC | 1 cut(s) | 1124 |
| BceAI | ACGGC | 3 cut(s) | 212, 281, 401 |
| BciT130I | CCWGG | 1 cut(s) | 837 |
| BclI | TGATCA | 3 cut(s) | 559, 727, 970 |
| BcoDI | GTCTC | 5 cut(s) | 180, 673, 1135, 1149, 1192 |
| BcuI | ACTAGT | 1 cut(s) | 1144 |
| BfaI | CTAG | 3 cut(s) | 860, 1145, 1151 |
| BisI | GCNGC | 3 cut(s) | 285, 783, 825 |
| BlsI | GCNGC | 3 cut(s) | 286, 784, 826 |
| BmcAI | AGTACT | 2 cut(s) | 328, 1149 |
| Bme1390I | CCNGG | 1 cut(s) | 837 |
| Bme18I | GGWCC | 3 cut(s) | 851, 1030, 1091 |
| BmgBI | CACGTC | 1 cut(s) | 1167 |
| BmgT120I | GGNCC | 3 cut(s) | 851, 1030, 1091 |
| BmiI | GGNNCC | 1 cut(s) | 456 |
| BmrFI | CCNGG | 1 cut(s) | 837 |
| BmrI | ACTGGG | 1 cut(s) | 938 |
| BmsI | GCATC | 5 cut(s) | 565, 619, 811, 926, 1066 |
| BmuI | ACTGGG | 1 cut(s) | 938 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1114 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1268, 1300 |
| BpmI | CTGGAG | 1 cut(s) | 945 |
| Bpu10I | CCTNAGC | 1 cut(s) | 868 |
| BpuEI | CTTGAG | 2 cut(s) | 444, 470 |
| BsaAI | YACGTR | 1 cut(s) | 623 |
| BsaJI | CCNNGG | 2 cut(s) | 309, 835 |
| BsaWI | WCCGGW | 2 cut(s) | 1027, 1209 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 604, 1010, 1088 |
| Bse118I | RCCGGY | 1 cut(s) | 1097 |
| Bse1I | ACTGG | 3 cut(s) | 748, 793, 944 |
| BseBI | CCWGG | 1 cut(s) | 837 |
| BseDI | CCNNGG | 2 cut(s) | 309, 835 |
| BseGI | GGATG | 2 cut(s) | 613, 1081 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 604, 1010, 1088 |
| BseMII | CTCAG | 2 cut(s) | 556, 882 |
| BseNI | ACTGG | 3 cut(s) | 748, 793, 944 |
| BseRI | GAGGAG | 3 cut(s) | 48, 236, 1071 |
| BseXI | GCAGC | 2 cut(s) | 769, 836 |
| Bsh1236I | CGCG | 3 cut(s) | 263, 359, 431 |
| BshFI | GGCC | 1 cut(s) | 690 |
| BshNI | GGYRCC | 1 cut(s) | 454 |
| BsiHKAI | GWGCWC | 2 cut(s) | 357, 1068 |
| BsiSI | CCGG | 5 cut(s) | 1028, 1098, 1107, 1210, 1307 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 604, 1010, 1088 |
| BsmAI | GTCTC | 5 cut(s) | 180, 673, 1135, 1149, 1192 |
| BsmBI | CGTCTC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 690 |
| Bsp1286I | GDGCHC | 2 cut(s) | 357, 1068 |
| Bsp68I | TCGCGA | 1 cut(s) | 359 |
| BspACI | CCGC | 5 cut(s) | 225, 285, 294, 846, 1059 |
| BspANI | GGCC | 1 cut(s) | 690 |
| BspCNI | CTCAG | 2 cut(s) | 555, 881 |
| BspFNI | CGCG | 3 cut(s) | 263, 359, 431 |
| BspLI | GGNNCC | 1 cut(s) | 456 |
| BspPI | GGATC | 3 cut(s) | 96, 126, 934 |
| BspT107I | GGYRCC | 1 cut(s) | 454 |
| BsrBI | CCGCTC | 1 cut(s) | 1059 |
| BsrFI | RCCGGY | 1 cut(s) | 1097 |
| BsrI | ACTGG | 3 cut(s) | 748, 793, 944 |
| BssAI | RCCGGY | 1 cut(s) | 1097 |
| BssECI | CCNNGG | 2 cut(s) | 309, 835 |
| Bst2UI | CCWGG | 1 cut(s) | 837 |
| Bst4CI | ACNGT | 4 cut(s) | 364, 955, 1178, 1249 |
| Bst6I | CTCTTC | 6 cut(s) | 50, 97, 210, 284, 760, 861 |
| BstBAI | YACGTR | 1 cut(s) | 623 |
| BstC8I | GCNNGC | 2 cut(s) | 357, 1099 |
| BstDEI | CTNAG | 5 cut(s) | 542, 868, 1009, 1259, 1317 |
| BstEII | GGTNACC | 1 cut(s) | 1243 |
| BstF5I | GGATG | 2 cut(s) | 613, 1081 |
| BstFNI | CGCG | 3 cut(s) | 263, 359, 431 |
| BstMAI | GTCTC | 5 cut(s) | 180, 673, 1135, 1149, 1192 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 293, 1103, 1233 |
| BstNI | CCWGG | 1 cut(s) | 837 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1114 |
| BstPI | GGTNACC | 1 cut(s) | 1243 |
| BstSCI | CCNGG | 1 cut(s) | 835 |
| BstSNI | TACGTA | 1 cut(s) | 623 |
| BstUI | CGCG | 3 cut(s) | 263, 359, 431 |
| BstV1I | GCAGC | 2 cut(s) | 769, 836 |
| BsuRI | GGCC | 1 cut(s) | 690 |
| BtgZI | GCGATG | 1 cut(s) | 1251 |
| BtrI | CACGTC | 1 cut(s) | 1167 |
| BtsCI | GGATG | 2 cut(s) | 613, 1081 |
| BtuMI | TCGCGA | 1 cut(s) | 359 |
| Cac8I | GCNNGC | 2 cut(s) | 357, 1099 |
| Cfr10I | RCCGGY | 1 cut(s) | 1097 |
| Cfr13I | GGNCC | 3 cut(s) | 851, 1030, 1091 |
| CseI | GACGC | 1 cut(s) | 437 |
| Csp6I | GTAC | 6 cut(s) | 252, 327, 455, 1148, 1179, 1207 |
| CviAII | CATG | 1 cut(s) | 518 |
| CviQI | GTAC | 6 cut(s) | 252, 327, 455, 1148, 1179, 1207 |
| DdeI | CTNAG | 5 cut(s) | 542, 868, 1009, 1259, 1317 |
| EaeI | YGGCCR | 1 cut(s) | 688 |
| Eam1104I | CTCTTC | 6 cut(s) | 50, 97, 210, 284, 760, 861 |
| EarI | CTCTTC | 6 cut(s) | 50, 97, 210, 284, 760, 861 |
| EciI | GGCGGA | 1 cut(s) | 214 |
| Ecl136II | GAGCTC | 1 cut(s) | 355 |
| Eco105I | TACGTA | 1 cut(s) | 623 |
| Eco24I | GRGCYC | 1 cut(s) | 357 |
| Eco47I | GGWCC | 3 cut(s) | 851, 1030, 1091 |
| Eco53kI | GAGCTC | 1 cut(s) | 355 |
| Eco57I | CTGAAG | 1 cut(s) | 1097 |
| Eco91I | GGTNACC | 1 cut(s) | 1243 |
| EcoICRI | GAGCTC | 1 cut(s) | 355 |
| EcoO109I | RGGNCCY | 1 cut(s) | 851 |
| EcoO65I | GGTNACC | 1 cut(s) | 1243 |
| EcoRII | CCWGG | 1 cut(s) | 835 |
| EcoT38I | GRGCYC | 1 cut(s) | 357 |
| Esp3I | CGTCTC | 1 cut(s) | 180 |
| FaeI | CATG | 1 cut(s) | 521 |
| FaiI | YATR | 7 cut(s) | 501, 519, 656, 732, 752, 887, 1160 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1095, 1127 |
| FatI | CATG | 1 cut(s) | 517 |
| FauI | CCCGC | 1 cut(s) | 301 |
| FbaI | TGATCA | 3 cut(s) | 559, 727, 970 |
| Fnu4HI | GCNGC | 3 cut(s) | 285, 783, 825 |
| FokI | GGATG | 2 cut(s) | 620, 1088 |
| FriOI | GRGCYC | 1 cut(s) | 357 |
| Fsp4HI | GCNGC | 3 cut(s) | 285, 783, 825 |
| FspBI | CTAG | 3 cut(s) | 860, 1145, 1151 |
| GluI | GCNGC | 3 cut(s) | 285, 783, 825 |
| GsuI | CTGGAG | 1 cut(s) | 945 |
| HaeIII | GGCC | 1 cut(s) | 690 |
| HapII | CCGG | 5 cut(s) | 1028, 1098, 1107, 1210, 1307 |
| HgaI | GACGC | 1 cut(s) | 437 |
| Hin1II | CATG | 1 cut(s) | 521 |
| HincII | GTYRAC | 1 cut(s) | 1119 |
| HindII | GTYRAC | 1 cut(s) | 1119 |
| HindIII | AAGCTT | 1 cut(s) | 161 |
| HinfI | GANTC | 5 cut(s) | 150, 302, 666, 1213, 1313 |
| HpaII | CCGG | 5 cut(s) | 1028, 1098, 1107, 1210, 1307 |
| HphI | GGTGA | 5 cut(s) | 62, 988, 991, 1183, 1255 |
| Hpy166II | GTNNAC | 4 cut(s) | 400, 435, 1119, 1174 |
| Hpy188I | TCNGA | 4 cut(s) | 131, 149, 333, 538 |
| Hpy8I | GTNNAC | 4 cut(s) | 400, 435, 1119, 1174 |
| Hpy99I | CGWCG | 7 cut(s) | 10, 13, 16, 194, 263, 364, 1171 |
| HpyAV | CCTTC | 5 cut(s) | 59, 72, 88, 399, 918 |
| HpyCH4III | ACNGT | 4 cut(s) | 364, 955, 1178, 1249 |
| HpyCH4IV | ACGT | 5 cut(s) | 444, 622, 875, 1126, 1166 |
| HpyCH4V | TGCA | 7 cut(s) | 578, 614, 632, 785, 824, 917, 1227 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 293, 1103, 1233 |
| HpyF3I | CTNAG | 5 cut(s) | 542, 868, 1009, 1259, 1317 |
| HpySE526I | ACGT | 5 cut(s) | 444, 622, 875, 1126, 1166 |
| Hsp92II | CATG | 1 cut(s) | 521 |
| KpnI | GGTACC | 1 cut(s) | 458 |
| KroI | GCCGGC | 1 cut(s) | 1097 |
| KroNI | GCCGGC | 1 cut(s) | 1099 |
| Ksp22I | TGATCA | 3 cut(s) | 559, 727, 970 |
| LmnI | GCTCC | 1 cut(s) | 1084 |
| Lsp1109I | GCAGC | 2 cut(s) | 769, 836 |
| LweI | GCATC | 5 cut(s) | 565, 619, 811, 926, 1066 |
| MaeI | CTAG | 3 cut(s) | 860, 1145, 1151 |
| MaeII | ACGT | 5 cut(s) | 444, 622, 875, 1126, 1166 |
| MaeIII | GTNAC | 7 cut(s) | 505, 547, 839, 994, 1133, 1243, 1288 |
| MbiI | CCGCTC | 1 cut(s) | 1059 |
| MfeI | CAATTG | 1 cut(s) | 1046 |
| MhlI | GDGCHC | 2 cut(s) | 357, 1068 |
| MlsI | TGGCCA | 1 cut(s) | 690 |
| MluCI | AATT | 8 cut(s) | 111, 511, 644, 771, 798, 879, 1019, 1046 |
| MluI | ACGCGT | 1 cut(s) | 429 |
| MluNI | TGGCCA | 1 cut(s) | 690 |
| MlyI | GAGTC | 1 cut(s) | 675 |
| MmeI | TCCRAC | 2 cut(s) | 568, 643 |
| Mox20I | TGGCCA | 1 cut(s) | 690 |
| MroNI | GCCGGC | 1 cut(s) | 1097 |
| MscI | TGGCCA | 1 cut(s) | 690 |
| MseI | TTAA | 4 cut(s) | 231, 647, 831, 878 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1169 |
| Msp20I | TGGCCA | 1 cut(s) | 690 |
| MspA1I | CMGCKG | 2 cut(s) | 846, 976 |
| MspI | CCGG | 5 cut(s) | 1028, 1098, 1107, 1210, 1307 |
| MspR9I | CCNGG | 1 cut(s) | 837 |
| MunI | CAATTG | 1 cut(s) | 1046 |
| MvaI | CCWGG | 1 cut(s) | 837 |
| MvnI | CGCG | 3 cut(s) | 263, 359, 431 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 293, 1103, 1233 |
| NaeI | GCCGGC | 1 cut(s) | 1099 |
| NgoMIV | GCCGGC | 1 cut(s) | 1097 |
| NlaIII | CATG | 1 cut(s) | 521 |
| NlaIV | GGNNCC | 1 cut(s) | 456 |
| NmeAIII | GCCGAG | 1 cut(s) | 290 |
| NmuCI | GTSAC | 3 cut(s) | 547, 994, 1243 |
| NruI | TCGCGA | 1 cut(s) | 359 |
| OliI | CACNNNNGTG | 1 cut(s) | 1169 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 145 |
| PdiI | GCCGGC | 1 cut(s) | 1099 |
| PfeI | GAWTC | 3 cut(s) | 150, 302, 1213 |
| PkrI | GCNGC | 3 cut(s) | 286, 784, 826 |
| PleI | GAGTC | 1 cut(s) | 674 |
| PpsI | GAGTC | 1 cut(s) | 674 |
| Ppu21I | YACGTR | 1 cut(s) | 623 |
| PpuMI | RGGWCCY | 1 cut(s) | 851 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1114 |
| PsiI | TTATAA | 1 cut(s) | 752 |
| Psp124BI | GAGCTC | 1 cut(s) | 357 |
| Psp1406I | AACGTT | 1 cut(s) | 875 |
| Psp5II | RGGWCCY | 1 cut(s) | 851 |
| Psp6I | CCWGG | 1 cut(s) | 835 |
| PspEI | GGTNACC | 1 cut(s) | 1243 |
| PspGI | CCWGG | 1 cut(s) | 835 |
| PspN4I | GGNNCC | 1 cut(s) | 456 |
| PspPI | GGNCC | 3 cut(s) | 851, 1030, 1091 |
| PspPPI | RGGWCCY | 1 cut(s) | 851 |
| PvuII | CAGCTG | 1 cut(s) | 976 |
| RruI | TCGCGA | 1 cut(s) | 359 |
| RsaI | GTAC | 6 cut(s) | 253, 328, 456, 1149, 1180, 1208 |
| RsaNI | GTAC | 6 cut(s) | 252, 327, 455, 1148, 1179, 1207 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1169 |
| SacI | GAGCTC | 1 cut(s) | 357 |
| SaqAI | TTAA | 4 cut(s) | 231, 647, 831, 878 |
| SatI | GCNGC | 3 cut(s) | 285, 783, 825 |
| Sau96I | GGNCC | 3 cut(s) | 851, 1030, 1091 |
| ScaI | AGTACT | 2 cut(s) | 328, 1149 |
| SchI | GAGTC | 1 cut(s) | 675 |
| ScrFI | CCNGG | 1 cut(s) | 837 |
| SduI | GDGCHC | 2 cut(s) | 357, 1068 |
| SfaNI | GCATC | 5 cut(s) | 565, 619, 811, 926, 1066 |
| SinI | GGWCC | 3 cut(s) | 851, 1030, 1091 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1169 |
| SmlI | CTYRAG | 2 cut(s) | 449, 459 |
| SmoI | CTYRAG | 2 cut(s) | 449, 459 |
| SnaBI | TACGTA | 1 cut(s) | 623 |
| SpeI | ACTAGT | 1 cut(s) | 1144 |
| Sse9I | AATT | 8 cut(s) | 111, 511, 644, 771, 798, 879, 1019, 1046 |
| SsiI | CCGC | 5 cut(s) | 225, 285, 294, 846, 1059 |
| SspMI | CTAG | 3 cut(s) | 860, 1145, 1151 |
| SstI | GAGCTC | 1 cut(s) | 357 |
| StyD4I | CCNGG | 1 cut(s) | 835 |
| TaaI | ACNGT | 4 cut(s) | 364, 955, 1178, 1249 |
| TaiI | ACGT | 5 cut(s) | 447, 625, 878, 1129, 1169 |
| TaqI | TCGA | 4 cut(s) | 158, 938, 1218, 1296 |
| TasI | AATT | 8 cut(s) | 111, 511, 644, 771, 798, 879, 1019, 1046 |
| TatI | WGTACW | 2 cut(s) | 326, 1147 |
| TauI | GCSGC | 1 cut(s) | 287 |
| TfiI | GAWTC | 3 cut(s) | 150, 302, 1213 |
| Tru1I | TTAA | 4 cut(s) | 231, 647, 831, 878 |
| Tru9I | TTAA | 4 cut(s) | 231, 647, 831, 878 |
| TseFI | GTSAC | 3 cut(s) | 547, 994, 1243 |
| TseI | GCWGC | 2 cut(s) | 782, 824 |
| Tsp45I | GTSAC | 3 cut(s) | 547, 994, 1243 |
| TspDTI | ATGAA | 1 cut(s) | 197 |
| TspGWI | ACGGA | 3 cut(s) | 207, 247, 382 |
| VpaK11BI | GGWCC | 3 cut(s) | 851, 1030, 1091 |
| XapI | RAATTY | 1 cut(s) | 1019 |
| XbaI | TCTAGA | 1 cut(s) | 859 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 524 |
| XspI | CTAG | 3 cut(s) | 860, 1145, 1151 |
| ZrmI | AGTACT | 2 cut(s) | 328, 1149 |