Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0009878

Physical Location & Seq

Genomic Coordinates Reverse (-)

1971719 .. 1975333

Gene Structure 3615 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1032500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGCTGCTTCTTCGCTGATTTCCACACACTTCCACTCTTCCTCCCCAACTTTCTCACCACTTTCTCGCTCCCCAAACAGAAAGTTCCTTCCTTTCCCTCTCTCCAAACCCTTTTCCCTCCACAAACCCACAGCCTCAACCTCCCCCATCCTCTCCCTCCACCGCAAAACCCAGAAGCGGTCTCTGATCCCGCCGTACAAGTCCTACTGTCCCCCGTGCCTCCACAAGCTTCTGCTCGCCACCAAGAACCCCTTCTCCTCGGGTCTCGAATCTCTGCTCATTCTTTGCGCTTCGGCGGCTCTGTCGCTTTCCCTGTTCATCGCCGATGTGGATCCCGCCTCCGCTTTCGTCGTCACTCCGCCGAGGAAGCTGCAGTCCGATGAGCTCGCCACGGTTCAGCTCTTTCGGGAGAACACTCCCTCTGTTGTTTACATCACCAATCTTGCAGCCAGGCAGGATGCGTTTACTTTGGACGTGTTTGAGGTGCCGCAGGGGTCTGGGTCAGGCTTCGTGTGGGATAAAAATGGCAACGTTGTCACCAATTACCACGTGATTCGCGGCGCTTCTGATCTCAGGGTCACGCTTGGTGATCAGTCAACTTTTAATGCCAAGGTTGTTGGATTTGACCAAGACAAGGATGTTGCTGTTCTACATGTTGATGCGCCCAAGGAGAAACTAAGGCCTATACCGATTGGTCAATCTGCAGACTTGCTGGTTGGTCAGAAAGTGTTTGCTATCGGCAATCCTTTTGGGCTTGATCATACTCTTACCACTGGCGTTATCAGTGGGCTTCGTAGAGAAATTAGTTCTGCTGCTACTGGCCGTCCAATTCAAGATGTTATACAGACAGATGCTGCCATTAATCCTGGGAATAGTGGGGGGCCACTTCTAGATAGTACAGGAAGCCTTATCGGGATAAACACAGCTATATATTCTCCAAATGGTGCATCATCTGGTGTTGGATTTTCTATTCCAGTTGACACAGTAAATGGTATTGTTGACCAATTGGTCAAATTTGGGAAGGTCACGAGACCTATTTTAGGGATTAAGTTTGCACCTGATCAATCTGTTGAACAGTTGGGGTTAAGTGGTGTGCTTCTCTTAGACGCACCAGCTAACGGTCCAGCTGGCAAAGCGGGACTGGTACCAACCAAGCGCGACGCCTATGGTAGACTCATATTGGGTGACATTATAACATCTGTGAATGGAAAAAAGGTCAGCAATGGCAGCGACTTGTATAGAATTCTCGATCAGTGTAAAGTGGGCGACAAGGTGTTTGTGGAGGTGTTGCGCGGCGATCAGAAGGAGAAAATCCCTGTTGTGCTTGAATCAAAGGCCGACGAGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009056 GO:0009057 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009987 GO:0010033 GO:0010206 GO:0015979 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0019684 GO:0030091 GO:0030163 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0042221 GO:0042651 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ_2 Trypsin_2

Protein Analysis

450

Amino Acids

47.71

Weight (kDa)

8.99

Isoelectric Point (pI)

33.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trypsin_2	PF13365	167 - 306	6.8e-35	Trypsin-like peptidase domain
Trypsin	PF00089	168 - 330	1.3e-20	Trypsin
PDZ_2	PF13180	345 - 440	5e-10	PDZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27925 AT3G27925
fragaria_vesca	FvH4_6g50761
malus_domestica	MD09G1032500.v1.1 MD17G1034100.v1.1
prunus_persica	Prupe.3G285500_v2.0.a1
pyrus_communis	pycom111g02590 pycom17g03150
rosa_chinensis	RchiOBHm_Chr2g0171711
rosa_laevigata	RLG00000022031
rosa_multiflora	Rmu_co8512701.1_g000001 Rmu_ssc0000252.1_g000013
rosa_roxburghii	Rroxscaffold_2G00080500
rosa_rugosa	Rorug02G0555500 Rorug02G0555500
rosa_samantha	Rh2BG641100 Rh2BG643600 Rh2CG609300 Rh2DG652000 Rh2DG657300
rosa_wichuraiana	Rw2G052190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1193
AasI	GACNNNNNNGTC	1 cut(s)	1007
Acc65I	GGTACC	1 cut(s)	1144
AccB1I	GGYRCC	2 cut(s)	484, 1144
AccI	GTMKAC	1 cut(s)	1171
AccII	CGCG	3 cut(s)	558, 1158, 1293
AclI	AACGTT	1 cut(s)	531
AclWI	GGATC	3 cut(s)	181, 326, 339
AcoI	YGGCCR	1 cut(s)	820
AcsI	RAATTY	2 cut(s)	1013, 1242
AcvI	CACGTG	1 cut(s)	550
AcyI	GRCGYC	1 cut(s)	1161
AfaI	GTAC	3 cut(s)	197, 898, 1146
AfiI	CCNNNNNNNGG	4 cut(s)	177, 634, 1040, 1118
AflIII	ACRYGT	2 cut(s)	474, 652
AgsI	TTSAA	3 cut(s)	833, 1073, 1328
AjiI	CACGTC	1 cut(s)	475
AjnI	CCWGG	2 cut(s)	449, 865
AjuI	GAANNNNNNNTTGG	2 cut(s)	236, 268
AloI	GAACNNNNNNTCC	2 cut(s)	239, 271
AluBI	AGCT	7 cut(s)	229, 370, 385, 400, 926, 1115, 1127
AluI	AGCT	7 cut(s)	229, 370, 385, 400, 926, 1115, 1127
Alw21I	GWGCWC	1 cut(s)	387
Alw26I	GTCTC	4 cut(s)	186, 269, 1024, 1337
AlwI	GGATC	3 cut(s)	181, 326, 339
AlwNI	CAGNNNCTG	1 cut(s)	854
Ama87I	CYCGRG	1 cut(s)	259
AoxI	GGCC	4 cut(s)	680, 820, 881, 1335
ApeKI	GCWGC	6 cut(s)	5, 370, 446, 812, 854, 1227
ApoI	RAATTY	2 cut(s)	1013, 1242
ArsI	GACNNNNNNTTYG	2 cut(s)	1259, 1291
AseI	ATTAAT	1 cut(s)	861
Asp700I	GAANNNNTTC	1 cut(s)	251
Asp718I	GGTACC	1 cut(s)	1144
AspLEI	GCGC	5 cut(s)	290, 563, 664, 1158, 1293
AspS9I	GGNCC	2 cut(s)	881, 1121
AsuHPI	GGTGA	5 cut(s)	48, 427, 529, 599, 1196
AvaI	CYCGRG	1 cut(s)	259
AvaII	GGWCC	1 cut(s)	1121
BamHI	GGATCC	1 cut(s)	331
BanI	GGYRCC	2 cut(s)	484, 1144
BanII	GRGCYC	1 cut(s)	387
BauI	CACGAG	1 cut(s)	1027
BbrPI	CACGTG	1 cut(s)	550
Bbv12I	GWGCWC	1 cut(s)	387
BbvI	GCAGC	5 cut(s)	357, 458, 799, 841, 1239
BccI	CCATC	1 cut(s)	155
BceAI	ACGGC	2 cut(s)	178, 807
BcgI	CGANNNNNNTGC	2 cut(s)	352, 386
BciT130I	CCWGG	2 cut(s)	451, 867
BclI	TGATCA	3 cut(s)	589, 757, 1060
BcoDI	GTCTC	4 cut(s)	186, 269, 1024, 1337
BfaI	CTAG	1 cut(s)	890
BfmI	CTRYAG	2 cut(s)	371, 702
BfoI	RGCGCY	1 cut(s)	564
Bme1390I	CCNGG	2 cut(s)	451, 867
Bme18I	GGWCC	1 cut(s)	1121
BmeT110I	CYCGRG	1 cut(s)	259
BmgBI	CACGTC	1 cut(s)	475
BmgT120I	GGNCC	2 cut(s)	881, 1121
BmiI	GGNNCC	4 cut(s)	333, 486, 882, 1146
BmrFI	CCNGG	2 cut(s)	451, 867
BmsI	GCATC	4 cut(s)	448, 649, 841, 956
BsaAI	YACGTR	1 cut(s)	550
BsaBI	GATNNNNATC	1 cut(s)	330
BsaHI	GRCGYC	1 cut(s)	1161
BsaI	GGTCTC	3 cut(s)	186, 269, 1024
BsaJI	CCNNGG	6 cut(s)	258, 362, 390, 609, 666, 866
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 239, 269
Bsc4I	CCNNNNNNNGG	4 cut(s)	177, 634, 1040, 1118
Bse1I	ACTGG	4 cut(s)	778, 823, 974, 1146
Bse3DI	GCAATG	1 cut(s)	1228
Bse8I	GATNNNNATC	1 cut(s)	330
BseBI	CCWGG	2 cut(s)	451, 867
BseDI	CCNNGG	6 cut(s)	258, 362, 390, 609, 666, 866
BseGI	GGATG	3 cut(s)	147, 463, 643
BseJI	GATNNNNATC	1 cut(s)	330
BseLI	CCNNNNNNNGG	4 cut(s)	177, 634, 1040, 1118
BseMI	GCAATG	1 cut(s)	1228
BseMII	CTCAG	1 cut(s)	586
BseNI	ACTGG	4 cut(s)	778, 823, 974, 1146
BseRI	GAGGAG	1 cut(s)	247
BseXI	GCAGC	5 cut(s)	357, 458, 799, 841, 1239
Bsh1236I	CGCG	3 cut(s)	558, 1158, 1293
BshFI	GGCC	4 cut(s)	682, 822, 883, 1337
BshNI	GGYRCC	2 cut(s)	484, 1144
BsiHKAI	GWGCWC	1 cut(s)	387
BsiHKCI	CYCGRG	1 cut(s)	259
BslFI	GGGAC	2 cut(s)	195, 1152
BslI	CCNNNNNNNGG	4 cut(s)	177, 634, 1040, 1118
BsmAI	GTCTC	4 cut(s)	186, 269, 1024, 1337
BsmFI	GGGAC	2 cut(s)	195, 1152
BsnI	GGCC	4 cut(s)	682, 822, 883, 1337
Bso31I	GGTCTC	3 cut(s)	186, 269, 1024
BsoBI	CYCGRG	1 cut(s)	259
Bsp1286I	GDGCHC	1 cut(s)	387
Bsp143I	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
BspANI	GGCC	4 cut(s)	682, 822, 883, 1337
BspCNI	CTCAG	1 cut(s)	585
BspFNI	CGCG	3 cut(s)	558, 1158, 1293
BspLI	GGNNCC	4 cut(s)	333, 486, 882, 1146
BspMAI	CTGCAG	2 cut(s)	375, 706
BspPI	GGATC	3 cut(s)	181, 326, 339
BspT107I	GGYRCC	2 cut(s)	484, 1144
BspTNI	GGTCTC	3 cut(s)	186, 269, 1024
BsrDI	GCAATG	1 cut(s)	1228
BsrI	ACTGG	4 cut(s)	778, 823, 974, 1146
BssECI	CCNNGG	6 cut(s)	258, 362, 390, 609, 666, 866
BssMI	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
BssNI	GRCGYC	1 cut(s)	1161
BssSI	CACGAG	1 cut(s)	1027
BssT1I	CCWWGG	2 cut(s)	609, 666
Bst2BI	CACGAG	1 cut(s)	1027
Bst2UI	CCWGG	2 cut(s)	451, 867
Bst4CI	ACNGT	5 cut(s)	209, 394, 985, 1077, 1121
Bst6I	CTCTTC	1 cut(s)	43
BstACI	GRCGYC	1 cut(s)	1161
BstBAI	YACGTR	1 cut(s)	550
BstC8I	GCNNGC	3 cut(s)	237, 387, 1129
BstDEI	CTNAG	3 cut(s)	572, 677, 1102
BstDSI	CCRYGG	1 cut(s)	390
BstENI	CCTNNNNNAGG	1 cut(s)	1038
BstF5I	GGATG	3 cut(s)	147, 463, 643
BstFNI	CGCG	3 cut(s)	558, 1158, 1293
BstH2I	RGCGCY	1 cut(s)	564
BstHHI	GCGC	5 cut(s)	290, 563, 664, 1158, 1293
BstKTI	GATC	8 cut(s)	189, 334, 571, 592, 760, 1063, 1252, 1300
BstMAI	GTCTC	4 cut(s)	186, 269, 1024, 1337
BstMBI	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
BstMWI	GCNNNNNNNGC	4 cut(s)	296, 367, 1133, 1227
BstNI	CCWGG	2 cut(s)	451, 867
BstNSI	RCATGY	1 cut(s)	656
BstSCI	CCNGG	2 cut(s)	449, 865
BstSFI	CTRYAG	2 cut(s)	371, 702
BstUI	CGCG	3 cut(s)	558, 1158, 1293
BstV1I	GCAGC	5 cut(s)	357, 458, 799, 841, 1239
BstX2I	RGATCY	1 cut(s)	331
BstYI	RGATCY	1 cut(s)	331
BsuRI	GGCC	4 cut(s)	682, 822, 883, 1337
BtgI	CCRYGG	1 cut(s)	390
BtgZI	GCGATG	1 cut(s)	304
BtrI	CACGTC	1 cut(s)	475
BtsCI	GGATG	3 cut(s)	147, 463, 643
BtsIMutI	CAGTG	3 cut(s)	771, 790, 1259
Cac8I	GCNNGC	3 cut(s)	237, 387, 1129
CaiI	CAGNNNCTG	1 cut(s)	854
CfoI	GCGC	5 cut(s)	290, 563, 664, 1158, 1293
Cfr13I	GGNCC	2 cut(s)	881, 1121
CseI	GACGC	2 cut(s)	1115, 1169
Csp6I	GTAC	3 cut(s)	196, 897, 1145
CviAII	CATG	2 cut(s)	653, 1347
CviQI	GTAC	3 cut(s)	196, 897, 1145
DdeI	CTNAG	3 cut(s)	572, 677, 1102
DpnI	GATC	8 cut(s)	188, 333, 570, 591, 759, 1062, 1251, 1299
DpnII	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
DrdI	GACNNNNNNGTC	1 cut(s)	1007
DseDI	GACNNNNNNGTC	1 cut(s)	1007
EaeI	YGGCCR	1 cut(s)	820
Eam1104I	CTCTTC	1 cut(s)	43
EarI	CTCTTC	1 cut(s)	43
EciI	GGCGGA	1 cut(s)	348
Ecl136II	GAGCTC	1 cut(s)	385
Eco130I	CCWWGG	2 cut(s)	609, 666
Eco147I	AGGCCT	1 cut(s)	682
Eco24I	GRGCYC	1 cut(s)	387
Eco31I	GGTCTC	3 cut(s)	186, 269, 1024
Eco47I	GGWCC	1 cut(s)	1121
Eco53kI	GAGCTC	1 cut(s)	385
Eco72I	CACGTG	1 cut(s)	550
Eco88I	CYCGRG	1 cut(s)	259
EcoICRI	GAGCTC	1 cut(s)	385
EcoNI	CCTNNNNNAGG	1 cut(s)	1038
EcoRI	GAATTC	1 cut(s)	1242
EcoRII	CCWGG	2 cut(s)	449, 865
EcoT14I	CCWWGG	2 cut(s)	609, 666
EcoT38I	GRGCYC	1 cut(s)	387
ErhI	CCWWGG	2 cut(s)	609, 666
FaeI	CATG	2 cut(s)	656, 1350
FalI	AAGNNNNNCTT	2 cut(s)	236, 268
FaqI	GGGAC	2 cut(s)	195, 1152
FatI	CATG	2 cut(s)	652, 1346
FauI	CCCGC	3 cut(s)	198, 343, 1129
FbaI	TGATCA	3 cut(s)	589, 757, 1060
FblI	GTMKAC	1 cut(s)	1171
FokI	GGATG	3 cut(s)	134, 470, 650
FriOI	GRGCYC	1 cut(s)	387
FspBI	CTAG	1 cut(s)	890
GlaI	GCGC	5 cut(s)	289, 562, 663, 1157, 1292
HaeII	RGCGCY	1 cut(s)	564
HaeIII	GGCC	4 cut(s)	682, 822, 883, 1337
HgaI	GACGC	2 cut(s)	1115, 1169
HhaI	GCGC	5 cut(s)	290, 563, 664, 1158, 1293
Hin1I	GRCGYC	1 cut(s)	1161
Hin1II	CATG	2 cut(s)	656, 1350
Hin6I	GCGC	5 cut(s)	288, 561, 662, 1156, 1291
HinP1I	GCGC	5 cut(s)	288, 561, 662, 1156, 1291
HincII	GTYRAC	3 cut(s)	597, 979, 1000
HindII	GTYRAC	3 cut(s)	597, 979, 1000
HindIII	AAGCTT	1 cut(s)	227
HinfI	GANTC	4 cut(s)	269, 553, 1173, 1328
HphI	GGTGA	5 cut(s)	48, 427, 529, 599, 1196
Hpy166II	GTNNAC	6 cut(s)	430, 465, 597, 979, 1000, 1172
Hpy188I	TCNGA	5 cut(s)	186, 379, 568, 723, 1302
Hpy188III	TCNNGA	7 cut(s)	266, 407, 833, 890, 913, 1027, 1247
Hpy8I	GTNNAC	6 cut(s)	430, 465, 597, 979, 1000, 1172
Hpy99I	CGWCG	3 cut(s)	353, 1163, 1343
HpyAV	CCTTC	4 cut(s)	98, 262, 1015, 1297
HpyCH4III	ACNGT	5 cut(s)	209, 394, 985, 1077, 1121
HpyCH4IV	ACGT	3 cut(s)	474, 531, 549
HpyCH4V	TGCA	5 cut(s)	373, 446, 704, 947, 1055
HpyF10VI	GCNNNNNNNGC	4 cut(s)	296, 367, 1133, 1227
HpyF3I	CTNAG	3 cut(s)	572, 677, 1102
HpySE526I	ACGT	3 cut(s)	474, 531, 549
Hsp92I	GRCGYC	1 cut(s)	1161
Hsp92II	CATG	2 cut(s)	656, 1350
HspAI	GCGC	5 cut(s)	288, 561, 662, 1156, 1291
KpnI	GGTACC	1 cut(s)	1148
Ksp22I	TGATCA	3 cut(s)	589, 757, 1060
Kzo9I	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
LmnI	GCTCC	1 cut(s)	74
Lsp1109I	GCAGC	5 cut(s)	357, 458, 799, 841, 1239
LweI	GCATC	4 cut(s)	448, 649, 841, 956
MaeI	CTAG	1 cut(s)	890
MaeII	ACGT	3 cut(s)	474, 531, 549
MaeIII	GTNAC	5 cut(s)	352, 535, 577, 1024, 1184
MalI	GATC	8 cut(s)	188, 333, 570, 591, 759, 1062, 1251, 1299
MboI	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
MboII	GAAGA	2 cut(s)	3, 30
MfeI	CAATTG	1 cut(s)	1004
MflI	RGATCY	1 cut(s)	331
MhlI	GDGCHC	1 cut(s)	387
MluCI	AATT	6 cut(s)	541, 801, 828, 1004, 1013, 1242
MlyI	GAGTC	1 cut(s)	1167
MmeI	TCCRAC	2 cut(s)	598, 940
MroXI	GAANNNNTTC	1 cut(s)	251
MseI	TTAA	4 cut(s)	603, 861, 1047, 1085
MslI	CAYNNNNRTG	1 cut(s)	657
MspA1I	CMGCKG	1 cut(s)	1127
MspR9I	CCNGG	2 cut(s)	451, 867
MunI	CAATTG	1 cut(s)	1004
MvaI	CCWGG	2 cut(s)	451, 867
MvnI	CGCG	3 cut(s)	558, 1158, 1293
MwoI	GCNNNNNNNGC	4 cut(s)	296, 367, 1133, 1227
NdeII	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
NlaIII	CATG	2 cut(s)	656, 1350
NlaIV	GGNNCC	4 cut(s)	333, 486, 882, 1146
NmeAIII	GCCGAG	1 cut(s)	387
NmuCI	GTSAC	5 cut(s)	352, 535, 577, 1024, 1184
NspI	RCATGY	1 cut(s)	656
PceI	AGGCCT	1 cut(s)	682
PciI	ACATGT	1 cut(s)	652
PdmI	GAANNNNTTC	1 cut(s)	251
PfeI	GAWTC	3 cut(s)	269, 553, 1328
PleI	GAGTC	1 cut(s)	1167
PmaCI	CACGTG	1 cut(s)	550
PmlI	CACGTG	1 cut(s)	550
PpsI	GAGTC	1 cut(s)	1167
Ppu21I	YACGTR	1 cut(s)	550
PscI	ACATGT	1 cut(s)	652
PshBI	ATTAAT	1 cut(s)	861
PsiI	TTATAA	1 cut(s)	1193
Psp124BI	GAGCTC	1 cut(s)	387
Psp1406I	AACGTT	1 cut(s)	531
Psp6I	CCWGG	2 cut(s)	449, 865
PspCI	CACGTG	1 cut(s)	550
PspGI	CCWGG	2 cut(s)	449, 865
PspN4I	GGNNCC	4 cut(s)	333, 486, 882, 1146
PspPI	GGNCC	2 cut(s)	881, 1121
PstI	CTGCAG	2 cut(s)	375, 706
PstNI	CAGNNNCTG	1 cut(s)	854
PsuI	RGATCY	1 cut(s)	331
PvuII	CAGCTG	1 cut(s)	1127
RsaI	GTAC	3 cut(s)	197, 898, 1146
RsaNI	GTAC	3 cut(s)	196, 897, 1145
RseI	CAYNNNNRTG	1 cut(s)	657
SacI	GAGCTC	1 cut(s)	387
SaqAI	TTAA	4 cut(s)	603, 861, 1047, 1085
Sau3AI	GATC	8 cut(s)	186, 331, 568, 589, 757, 1060, 1249, 1297
Sau96I	GGNCC	2 cut(s)	881, 1121
SchI	GAGTC	1 cut(s)	1167
ScrFI	CCNGG	2 cut(s)	451, 867
SduI	GDGCHC	1 cut(s)	387
SfaNI	GCATC	4 cut(s)	448, 649, 841, 956
SfcI	CTRYAG	2 cut(s)	371, 702
SinI	GGWCC	1 cut(s)	1121
SmiMI	CAYNNNNRTG	1 cut(s)	657
Sse9I	AATT	6 cut(s)	541, 801, 828, 1004, 1013, 1242
SseBI	AGGCCT	1 cut(s)	682
SspMI	CTAG	1 cut(s)	890
SstI	GAGCTC	1 cut(s)	387
StuI	AGGCCT	1 cut(s)	682
StyD4I	CCNGG	2 cut(s)	449, 865
StyI	CCWWGG	2 cut(s)	609, 666
TaaI	ACNGT	5 cut(s)	209, 394, 985, 1077, 1121
TaiI	ACGT	3 cut(s)	477, 534, 552
TaqI	TCGA	2 cut(s)	267, 1248
TasI	AATT	6 cut(s)	541, 801, 828, 1004, 1013, 1242
TatI	WGTACW	1 cut(s)	896
TauI	GCSGC	4 cut(s)	299, 490, 561, 1296
TfiI	GAWTC	3 cut(s)	269, 553, 1328
Tru1I	TTAA	4 cut(s)	603, 861, 1047, 1085
Tru9I	TTAA	4 cut(s)	603, 861, 1047, 1085
TscAI	CASTG	3 cut(s)	778, 790, 1259
TseFI	GTSAC	5 cut(s)	352, 535, 577, 1024, 1184
TseI	GCWGC	6 cut(s)	5, 370, 446, 812, 854, 1227
Tsp45I	GTSAC	5 cut(s)	352, 535, 577, 1024, 1184
TspDTI	ATGAA	1 cut(s)	307
TspRI	CASTG	3 cut(s)	778, 790, 1259
VpaK11BI	GGWCC	1 cut(s)	1121
VspI	ATTAAT	1 cut(s)	861
XagI	CCTNNNNNAGG	1 cut(s)	1038
XapI	RAATTY	2 cut(s)	1013, 1242
XbaI	TCTAGA	1 cut(s)	889
XceI	RCATGY	1 cut(s)	656
XmiI	GTMKAC	1 cut(s)	1171
XmnI	GAANNNNTTC	1 cut(s)	251
XspI	CTAG	1 cut(s)	890

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.