AT3G43240

ARID BRIGHT DNA-binding domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0006899
Physical Location & Seq
Reverse (-)
15209831 .. 15214947
5117 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G43240.1

Sequence Viewer

Length: 2244 bp
ATGTTTCATGGACAAGGGTTTTCGAGAAACCGTTGTAATGTTGTGGCAGTTGTTTCTGGAGCAGAGCTTTGCGATACTAATAACCAGATAGATGGAACTTCTCATCAACCCAAATACCCTTTTCCAGATCTCTCTTCTTCAGGGCGTCTCAAGTTTCAGGTACTGAATAATCCTACGCCGGAGGAGTTCCAGGTTGCTGTTAACTCTTCAGCAACGGATTTTGTGTACTTGCAAGGGGAACATAGTGGAGATAGTGATGAAGTTGGTCCCTTAGTGTTGGGATATACTGATTTTTCTACTCCTGATGCCTTGGTTACTCTGTTTGGTTCCACATTACCGACAACGGTTTACCTTGAGCTCCCAAATGGTGAAGAATTAGCTCAAGCACTCTACTCTAAGGGTGTTCAATATGTTATTTATTGGAAAAATGTTTTCTCGAAATATGCAGCCTGCCATTTTCGCCATTCTCTGTTTTCAGTCATACAGAGTTCGTGCAGCGATACATGGGATGTGTTCCATGTTGCAGAAGCATCTTTCCGACTCTATTGTACAAGTGACAATGCTGTCCTTCCTTCTAACAGCAACCGTAAAATGAATTATGAGATGGGACCTTGCTTGCTTGGAGAACCTCCAAAGATTGATGTGGTTTCACCGGAAGCTGATGAACTAGAAGAGGAAAATTCATTAGAGAGCCTCCCATCAATAAAGATATATGATGAAGATGTTACTGTGAGGTTTCTTTTGTGTGGACCACCATGCACAGTGGATACATTTTTACTGGGATCTTTGATGGATGGACTTAATGCTCTCTTGCGAATAGAAATGCGAGGAAGTAAGCTCCATAACCGTTCTAGTGCTCCAGCACCTCCTCTTCAAGCAGGAACATTTACTCGTGGTGTAGTGACCATGCGTTGTGATGTCTCGACCTGTTCTTCAGCACACATATCAATGCTTGTGTCTGGAAATGCGCAGACCTGTTTCAGTGATCAGCTTTTGGAAAATCACATAAAACATGAGGTCGTTGAGAAGATCCAACTAGTCCATTCAGTGGTGAACTCAGAAGAAACAAAGCGGGGTTTCTCTGAGCCTCGTAGATCTGCCTCAATAGCTTGTGGAGCAAGTGTGTGTGAAGTTTCGATGCAAGTCCCAACATGGGCTCTGCAGGTTTTAAGACAGTTGGCGCCGGATGTGTCATACCGCAGTTTAGTCGTTCTTGGAGTAGCTAGCATTCAGGGGTTGTCTGTTGCTTCCTTTGAGAAAGATGATGCAGAACGTTTACTTTTCTTCTGCGGACAACAGATCAATGATACTTCAAATCATGATGCTCTTTTATCCAAAATTCCTAACTGGTTAACACCTCCTTTGCCAACCAGAAAAAGATCCGAGCCATGCAGAGAAAGTAAGGAAATTGAAAACGGAGGACCTACATCAAGGAAAATCAACGTGGCTGCTTTGAGACCAATACCTCACACCCGTCGACATAAGATGATACCTTTCTCTGGTTACTCTGAAATTGGAAGATTTGATGGTGACCACACCAAAGGAAGCTTGCCTATGCCTCCAAAGCATGGTGCATCAGGTGGCACTCCAGTAACTCACCGTAAAGCTTTCTCTGGTTCGTACCAGAGAAAGCAAATCATCTCACTAAACCCTCTACCTTTAAAAAAACACGACTGTGGAAGAGCGCATATTCAAGTTTGCTCAGAGGAGGAGTTTCTGAGGGATGTAATGCAGTTTCTGCTAATACGAGGACATACCCGGCTAGTTCCTCCAGGGGGACTAGCGGAGTTTCCAGATGCTGTTCTCAACTCAAAACGGCTTGATCTCTTCAACTTGTATAGAGAGGTTGTATCACGGGGAGGGTTCCATGTAGGTAATGGGATCAACTGGAAGGGACAAGTTTTCTCAAAGATGCGCAACCACACACTCACAAACAGAATGACTGGTGTGGGTAATACCCTGAAAAGACACTATGAGACGTATCTATTGGAGTATGAGTATGCTCATGATGATGTAGATGGAGAGTGCTGTTTAATATGTCGCAGTAGCACAGCTGGTGACTGGGTGAACTGTGGATCATGTGGAGAGTGGGCTCATTTCGGATGTGACAGAAGGCCTGGCCTCGGCGCCTTCAAGGACTATGCAAAAACAGATGGGTTGGAATATGTGTGCCCAAATTGTAGTGTCTCAAATTACAGGAAGAAGTCTCAGAAGACCTCCAACGGTGGCTTGCTTGTACCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID

Protein Analysis

747

Amino Acids

82.57

Weight (kDa)

6.5

Isoelectric Point (pI)

39.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 569 - 666 1.8e-12 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 563
Acc16I TGCGCA 2 cut(s) 969, 1916
Acc36I ACCTGC 1 cut(s) 1153
AccB1I GGYRCC 2 cut(s) 1180, 2126
AccB7I CCANNNNNTGG 2 cut(s) 1048, 1568
AccI GTMKAC 1 cut(s) 1477
AciI CCGC 4 cut(s) 1072, 1198, 1290, 1784
AclI AACGTT 1 cut(s) 1273
AclWI GGATC 5 cut(s) 790, 1024, 1374, 1889, 2083
AcsI RAATTY 2 cut(s) 679, 1338
AcuI CTGAAG 3 cut(s) 123, 192, 918
AcyI GRCGYC 3 cut(s) 145, 1181, 2127
AfaI GTAC 5 cut(s) 162, 227, 550, 1622, 2238
AfiI CCNNNNNNNGG 6 cut(s) 1048, 1153, 1499, 1568, 1775, 2123
AgsI TTSAA 7 cut(s) 407, 875, 1314, 1412, 1694, 1831, 2134
AhlI ACTAGT 1 cut(s) 1036
AjnI CCWGG 3 cut(s) 189, 1771, 2116
AleI CACNNNNGTG 1 cut(s) 1674
Alw21I GWGCWC 2 cut(s) 360, 859
Alw26I GTCTC 6 cut(s) 152, 925, 1450, 1970, 2191, 2211
AlwI GGATC 5 cut(s) 790, 1024, 1374, 1889, 2083
AlwNI CAGNNNCTG 3 cut(s) 163, 1738, 1799
AoxI GGCC 2 cut(s) 2114, 2119
ApeKI GCWGC 3 cut(s) 446, 495, 1448
ApoI RAATTY 2 cut(s) 679, 1338
AspLEI GCGC 5 cut(s) 970, 1183, 1687, 1917, 2129
AspS9I GGNCC 4 cut(s) 266, 608, 749, 1421
AsuC2I CCSGG 1 cut(s) 1759
AsuHPI GGTGA 7 cut(s) 380, 642, 1063, 1541, 1589, 2069, 2077
AsuNHI GCTAGC 1 cut(s) 1223
AvaII GGWCC 4 cut(s) 266, 608, 749, 1421
BaeGI GKGCMC 1 cut(s) 2174
BanI GGYRCC 2 cut(s) 1180, 2126
BanII GRGCYC 3 cut(s) 360, 1159, 2095
BauI CACGAG 1 cut(s) 891
BbsI GAAGAC 1 cut(s) 2219
Bbv12I GWGCWC 2 cut(s) 360, 859
BbvI GCAGC 3 cut(s) 458, 507, 1435
BccI CCATC 8 cut(s) 86, 598, 706, 784, 788, 1520, 2012, 2147
BceAI ACGGC 1 cut(s) 1832
BcgI CGANNNNNNTGC 2 cut(s) 1189, 1223
BciT130I CCWGG 3 cut(s) 191, 1773, 2118
BciVI GTATCC 1 cut(s) 760
BclI TGATCA 1 cut(s) 985
BcnI CCSGG 1 cut(s) 1759
BcoDI GTCTC 6 cut(s) 152, 925, 1450, 1970, 2191, 2211
BcuI ACTAGT 1 cut(s) 1036
BfaI CTAG 6 cut(s) 668, 852, 1037, 1224, 1763, 1781
BfmI CTRYAG 1 cut(s) 1160
BfoI RGCGCY 2 cut(s) 1184, 2130
BfuAI ACCTGC 1 cut(s) 1153
BfuI GTATCC 1 cut(s) 760
BglII AGATCT 2 cut(s) 127, 1094
BisI GCNGC 3 cut(s) 447, 496, 1449
BlsI GCNGC 3 cut(s) 448, 497, 1450
Bme1390I CCNGG 4 cut(s) 191, 1759, 1773, 2118
Bme18I GGWCC 4 cut(s) 266, 608, 749, 1421
BmgT120I GGNCC 4 cut(s) 266, 608, 749, 1421
BmiI GGNNCC 6 cut(s) 268, 328, 609, 1182, 1865, 2128
BmrFI CCNGG 4 cut(s) 191, 1759, 1773, 2118
BmrI ACTGGG 2 cut(s) 788, 2071
BmsI GCATC 8 cut(s) 295, 539, 1128, 1255, 1312, 1583, 1786, 1902
BmtI GCTAGC 1 cut(s) 1227
BmuI ACTGGG 2 cut(s) 788, 2071
BpiI GAAGAC 1 cut(s) 2219
BpmI CTGGAG 4 cut(s) 78, 843, 1572, 1755
BpuEI CTTGAG 3 cut(s) 134, 366, 374
BpuMI CCSGG 1 cut(s) 1759
BsaHI GRCGYC 3 cut(s) 145, 1181, 2127
BsaI GGTCTC 1 cut(s) 1450
BsaJI CCNNGG 3 cut(s) 309, 1772, 2122
BsaWI WCCGGW 1 cut(s) 652
BsaXI ACNNNNNCTCC 4 cut(s) 1107, 1137, 1982, 2012
Bsc4I CCNNNNNNNGG 6 cut(s) 1048, 1153, 1499, 1568, 1775, 2123
Bse1I ACTGG 6 cut(s) 783, 1352, 1589, 1892, 1948, 2066
BseBI CCWGG 3 cut(s) 191, 1773, 2118
BseDI CCNNGG 3 cut(s) 309, 1772, 2122
BseGI GGATG 5 cut(s) 514, 799, 1192, 1729, 2108
BseLI CCNNNNNNNGG 6 cut(s) 1048, 1153, 1499, 1568, 1775, 2123
BseMII CTCAG 5 cut(s) 1071, 1074, 1709, 1716, 2222
BseNI ACTGG 6 cut(s) 783, 1352, 1589, 1892, 1948, 2066
BseRI GAGGAG 4 cut(s) 197, 858, 1721, 1724
BseSI GKGCMC 1 cut(s) 2174
BseXI GCAGC 3 cut(s) 458, 507, 1435
BsgI GTGCAG 1 cut(s) 514
BshFI GGCC 2 cut(s) 2116, 2121
BshNI GGYRCC 2 cut(s) 1180, 2126
BsiHKAI GWGCWC 2 cut(s) 360, 859
BsiSI CCGG 4 cut(s) 179, 653, 1184, 1759
BslFI GGGAC 5 cut(s) 252, 621, 1130, 1791, 1908
BslI CCNNNNNNNGG 6 cut(s) 1048, 1153, 1499, 1568, 1775, 2123
BsmAI GTCTC 6 cut(s) 152, 925, 1450, 1970, 2191, 2211
BsmBI CGTCTC 2 cut(s) 152, 1970
BsmFI GGGAC 5 cut(s) 252, 621, 1130, 1791, 1908
BsmI GAATGC 1 cut(s) 1227
BsnI GGCC 2 cut(s) 2116, 2121
Bso31I GGTCTC 1 cut(s) 1450
Bsp1286I GDGCHC 5 cut(s) 360, 859, 1159, 2095, 2174
Bsp1407I TGTACA 1 cut(s) 548
BspACI CCGC 4 cut(s) 1072, 1198, 1290, 1784
BspANI GGCC 2 cut(s) 2116, 2121
BspCNI CTCAG 5 cut(s) 1070, 1075, 1710, 1715, 2221
BspHI TCATGA 2 cut(s) 1318, 2005
BspLI GGNNCC 6 cut(s) 268, 328, 609, 1182, 1865, 2128
BspMAI CTGCAG 1 cut(s) 1164
BspMI ACCTGC 1 cut(s) 1153
BspOI GCTAGC 1 cut(s) 1227
BspPI GGATC 5 cut(s) 790, 1024, 1374, 1889, 2083
BspQI GCTCTTC 1 cut(s) 1675
BspT107I GGYRCC 2 cut(s) 1180, 2126
BspTNI GGTCTC 1 cut(s) 1450
BsrGI TGTACA 1 cut(s) 548
BsrI ACTGG 6 cut(s) 783, 1352, 1589, 1892, 1948, 2066
BssECI CCNNGG 3 cut(s) 309, 1772, 2122
BssNI GRCGYC 3 cut(s) 145, 1181, 2127
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 3 cut(s) 191, 1773, 2118
Bst6I CTCTTC 6 cut(s) 139, 211, 666, 876, 1675, 1832
BstACI GRCGYC 3 cut(s) 145, 1181, 2127
BstAPI GCANNNNNTGC 1 cut(s) 1738
BstAUI TGTACA 1 cut(s) 548
BstC8I GCNNGC 5 cut(s) 451, 617, 1225, 1550, 2231
BstDEI CTNAG 8 cut(s) 271, 396, 1057, 1083, 1702, 1718, 2208, 2241
BstEII GGTNACC 1 cut(s) 1529
BstF5I GGATG 5 cut(s) 514, 799, 1192, 1729, 2108
BstH2I RGCGCY 2 cut(s) 1184, 2130
BstHHI GCGC 5 cut(s) 970, 1183, 1687, 1917, 2129
BstMAI GTCTC 6 cut(s) 152, 925, 1450, 1970, 2191, 2211
BstMWI GCNNNNNNNGC 5 cut(s) 459, 1106, 1115, 1564, 1738
BstNI CCWGG 3 cut(s) 191, 1773, 2118
BstPI GGTNACC 1 cut(s) 1529
BstSCI CCNGG 4 cut(s) 189, 1757, 1771, 2116
BstSFI CTRYAG 1 cut(s) 1160
BstSLI GKGCMC 1 cut(s) 2174
BstV1I GCAGC 3 cut(s) 458, 507, 1435
BstV2I GAAGAC 1 cut(s) 2219
BstX2I RGATCY 5 cut(s) 127, 782, 1029, 1094, 1379
BstXI CCANNNNNNTGG 1 cut(s) 92
BstYI RGATCY 5 cut(s) 127, 782, 1029, 1094, 1379
BsuI GTATCC 1 cut(s) 760
BsuRI GGCC 2 cut(s) 2116, 2121
BtsCI GGATG 5 cut(s) 514, 799, 1192, 1729, 2108
BtsIMutI CAGTG 3 cut(s) 768, 988, 1053
BveI ACCTGC 1 cut(s) 1153
Cac8I GCNNGC 5 cut(s) 451, 617, 1225, 1550, 2231
CaiI CAGNNNCTG 3 cut(s) 163, 1738, 1799
CciI TCATGA 2 cut(s) 1318, 2005
CfoI GCGC 5 cut(s) 970, 1183, 1687, 1917, 2129
Cfr13I GGNCC 4 cut(s) 266, 608, 749, 1421
CseI GACGC 1 cut(s) 134
Csp6I GTAC 5 cut(s) 161, 226, 549, 1621, 2237
CviQI GTAC 5 cut(s) 161, 226, 549, 1621, 2237
DdeI CTNAG 8 cut(s) 271, 396, 1057, 1083, 1702, 1718, 2208, 2241
DinI GGCGCC 2 cut(s) 1182, 2128
DraI TTTAAA 1 cut(s) 1662
DrdI GACNNNNNNGTC 1 cut(s) 563
DseDI GACNNNNNNGTC 1 cut(s) 563
Eam1104I CTCTTC 6 cut(s) 139, 211, 666, 876, 1675, 1832
EarI CTCTTC 6 cut(s) 139, 211, 666, 876, 1675, 1832
Ecl136II GAGCTC 1 cut(s) 358
Eco130I CCWWGG 1 cut(s) 309
Eco147I AGGCCT 1 cut(s) 2116
Eco24I GRGCYC 3 cut(s) 360, 1159, 2095
Eco31I GGTCTC 1 cut(s) 1450
Eco47I GGWCC 4 cut(s) 266, 608, 749, 1421
Eco53kI GAGCTC 1 cut(s) 358
Eco57I CTGAAG 3 cut(s) 123, 192, 918
Eco91I GGTNACC 1 cut(s) 1529
EcoICRI GAGCTC 1 cut(s) 358
EcoO109I RGGNCCY 2 cut(s) 608, 1421
EcoO65I GGTNACC 1 cut(s) 1529
EcoRII CCWGG 3 cut(s) 189, 1771, 2116
EcoT14I CCWWGG 1 cut(s) 309
EcoT38I GRGCYC 3 cut(s) 360, 1159, 2095
EgeI GGCGCC 2 cut(s) 1182, 2128
EheI GGCGCC 2 cut(s) 1182, 2128
ErhI CCWWGG 1 cut(s) 309
Esp3I CGTCTC 2 cut(s) 152, 1970
FaqI GGGAC 5 cut(s) 252, 621, 1130, 1791, 1908
FauI CCCGC 1 cut(s) 1065
FbaI TGATCA 1 cut(s) 985
FblI GTMKAC 1 cut(s) 1477
Fnu4HI GCNGC 3 cut(s) 447, 496, 1449
FokI GGATG 5 cut(s) 521, 806, 1199, 1736, 2115
FriOI GRGCYC 3 cut(s) 360, 1159, 2095
Fsp4HI GCNGC 3 cut(s) 447, 496, 1449
FspBI CTAG 6 cut(s) 668, 852, 1037, 1224, 1763, 1781
FspI TGCGCA 2 cut(s) 969, 1916
GlaI GCGC 5 cut(s) 969, 1182, 1686, 1916, 2128
GluI GCNGC 3 cut(s) 447, 496, 1449
GsuI CTGGAG 4 cut(s) 78, 843, 1572, 1755
HaeII RGCGCY 2 cut(s) 1184, 2130
HaeIII GGCC 2 cut(s) 2116, 2121
HapII CCGG 4 cut(s) 179, 653, 1184, 1759
HgaI GACGC 1 cut(s) 134
HhaI GCGC 5 cut(s) 970, 1183, 1687, 1917, 2129
Hin1I GRCGYC 3 cut(s) 145, 1181, 2127
Hin6I GCGC 5 cut(s) 968, 1181, 1685, 1915, 2127
HinP1I GCGC 5 cut(s) 968, 1181, 1685, 1915, 2127
HincII GTYRAC 3 cut(s) 202, 1353, 1478
HindII GTYRAC 3 cut(s) 202, 1353, 1478
HindIII AAGCTT 2 cut(s) 1546, 1605
HinfI GANTC 1 cut(s) 540
HpaI GTTAAC 2 cut(s) 202, 1353
HpaII CCGG 4 cut(s) 179, 653, 1184, 1759
HphI GGTGA 7 cut(s) 380, 642, 1063, 1541, 1589, 2069, 2077
Hpy166II GTNNAC 9 cut(s) 202, 226, 349, 749, 1054, 1277, 1353, 1478, 2068
Hpy188I TCNGA 9 cut(s) 539, 1060, 1084, 1384, 1510, 1705, 1719, 2102, 2211
Hpy8I GTNNAC 9 cut(s) 202, 226, 349, 749, 1054, 1277, 1353, 1478, 2068
Hpy99I CGWCG 1 cut(s) 1479
HpyAV CCTTC 5 cut(s) 578, 582, 1885, 2106, 2140
HpyCH4IV ACGT 3 cut(s) 1273, 1443, 1979
HpyF10VI GCNNNNNNNGC 5 cut(s) 459, 1106, 1115, 1564, 1738
HpyF3I CTNAG 8 cut(s) 271, 396, 1057, 1083, 1702, 1718, 2208, 2241
HpySE526I ACGT 3 cut(s) 1273, 1443, 1979
Hsp92I GRCGYC 3 cut(s) 145, 1181, 2127
HspAI GCGC 5 cut(s) 968, 1181, 1685, 1915, 2127
KasI GGCGCC 2 cut(s) 1180, 2126
Ksp22I TGATCA 1 cut(s) 985
KspAI GTTAAC 2 cut(s) 202, 1353
LguI GCTCTTC 1 cut(s) 1675
LmnI GCTCC 5 cut(s) 59, 363, 843, 862, 1115
Lsp1109I GCAGC 3 cut(s) 458, 507, 1435
LweI GCATC 8 cut(s) 295, 539, 1128, 1255, 1312, 1583, 1786, 1902
MaeI CTAG 6 cut(s) 668, 852, 1037, 1224, 1763, 1781
MaeII ACGT 3 cut(s) 1273, 1443, 1979
MaeIII GTNAC 9 cut(s) 313, 554, 724, 901, 1502, 1529, 1591, 2057, 2105
MflI RGATCY 5 cut(s) 127, 782, 1029, 1094, 1379
MhlI GDGCHC 5 cut(s) 360, 859, 1159, 2095, 2174
MluCI AATT 8 cut(s) 374, 595, 679, 1338, 1407, 1512, 2176, 2191
Mly113I GGCGCC 2 cut(s) 1181, 2127
MlyI GAGTC 1 cut(s) 534
MmeI TCCRAC 4 cut(s) 562, 1057, 2139, 2244
MseI TTAA 6 cut(s) 201, 801, 1169, 1352, 1661, 2033
MslI CAYNNNNRTG 3 cut(s) 947, 1674, 2010
MspA1I CMGCKG 1 cut(s) 2054
MspI CCGG 4 cut(s) 179, 653, 1184, 1759
MspR9I CCNGG 4 cut(s) 191, 1759, 1773, 2118
Mva1269I GAATGC 1 cut(s) 1227
MvaI CCWGG 3 cut(s) 191, 1773, 2118
MwoI GCNNNNNNNGC 5 cut(s) 459, 1106, 1115, 1564, 1738
NarI GGCGCC 2 cut(s) 1181, 2127
NciI CCSGG 1 cut(s) 1759
NheI GCTAGC 1 cut(s) 1223
NlaIV GGNNCC 6 cut(s) 268, 328, 609, 1182, 1865, 2128
NmeAIII GCCGAG 1 cut(s) 2103
NmuCI GTSAC 5 cut(s) 554, 901, 1529, 2057, 2105
NsbI TGCGCA 2 cut(s) 969, 1916
OliI CACNNNNGTG 1 cut(s) 1674
PagI TCATGA 2 cut(s) 1318, 2005
PceI AGGCCT 1 cut(s) 2116
PciSI GCTCTTC 1 cut(s) 1675
PctI GAATGC 1 cut(s) 1227
PflMI CCANNNNNTGG 2 cut(s) 1048, 1568
PkrI GCNGC 3 cut(s) 448, 497, 1450
PleI GAGTC 1 cut(s) 534
PluTI GGCGCC 2 cut(s) 1184, 2130
PpsI GAGTC 1 cut(s) 534
PpuMI RGGWCCY 2 cut(s) 608, 1421
Psp124BI GAGCTC 1 cut(s) 360
Psp1406I AACGTT 1 cut(s) 1273
Psp5II RGGWCCY 2 cut(s) 608, 1421
Psp6I CCWGG 3 cut(s) 189, 1771, 2116
PspEI GGTNACC 1 cut(s) 1529
PspGI CCWGG 3 cut(s) 189, 1771, 2116
PspN4I GGNNCC 6 cut(s) 268, 328, 609, 1182, 1865, 2128
PspPI GGNCC 4 cut(s) 266, 608, 749, 1421
PspPPI RGGWCCY 2 cut(s) 608, 1421
PstI CTGCAG 1 cut(s) 1164
PstNI CAGNNNCTG 3 cut(s) 163, 1738, 1799
PsuI RGATCY 5 cut(s) 127, 782, 1029, 1094, 1379
PvuII CAGCTG 1 cut(s) 2054
RsaI GTAC 5 cut(s) 162, 227, 550, 1622, 2238
RsaNI GTAC 5 cut(s) 161, 226, 549, 1621, 2237
RseI CAYNNNNRTG 3 cut(s) 947, 1674, 2010
SacI GAGCTC 1 cut(s) 360
SalI GTCGAC 1 cut(s) 1476
SapI GCTCTTC 1 cut(s) 1675
SaqAI TTAA 6 cut(s) 201, 801, 1169, 1352, 1661, 2033
SatI GCNGC 3 cut(s) 447, 496, 1449
Sau96I GGNCC 4 cut(s) 266, 608, 749, 1421
SchI GAGTC 1 cut(s) 534
ScrFI CCNGG 4 cut(s) 191, 1759, 1773, 2118
SduI GDGCHC 5 cut(s) 360, 859, 1159, 2095, 2174
SfaNI GCATC 8 cut(s) 295, 539, 1128, 1255, 1312, 1583, 1786, 1902
SfcI CTRYAG 1 cut(s) 1160
SfoI GGCGCC 2 cut(s) 1182, 2128
SinI GGWCC 4 cut(s) 266, 608, 749, 1421
SmiMI CAYNNNNRTG 3 cut(s) 947, 1674, 2010
SmlI CTYRAG 3 cut(s) 149, 353, 381
SmoI CTYRAG 3 cut(s) 149, 353, 381
SpeI ACTAGT 1 cut(s) 1036
Sse9I AATT 8 cut(s) 374, 595, 679, 1338, 1407, 1512, 2176, 2191
SseBI AGGCCT 1 cut(s) 2116
SsiI CCGC 4 cut(s) 1072, 1198, 1290, 1784
SspDI GGCGCC 2 cut(s) 1180, 2126
SspMI CTAG 6 cut(s) 668, 852, 1037, 1224, 1763, 1781
SstI GAGCTC 1 cut(s) 360
StuI AGGCCT 1 cut(s) 2116
StyD4I CCNGG 4 cut(s) 189, 1757, 1771, 2116
StyI CCWWGG 1 cut(s) 309
TaiI ACGT 3 cut(s) 1276, 1446, 1982
TaqI TCGA 5 cut(s) 23, 437, 923, 1136, 1477
TasI AATT 8 cut(s) 374, 595, 679, 1338, 1407, 1512, 2176, 2191
TatI WGTACW 2 cut(s) 225, 548
Tru1I TTAA 6 cut(s) 201, 801, 1169, 1352, 1661, 2033
Tru9I TTAA 6 cut(s) 201, 801, 1169, 1352, 1661, 2033
TscAI CASTG 3 cut(s) 768, 988, 1053
TseFI GTSAC 5 cut(s) 554, 901, 1529, 2057, 2105
TseI GCWGC 3 cut(s) 446, 495, 1448
Tsp45I GTSAC 5 cut(s) 554, 901, 1529, 2057, 2105
TspDTI ATGAA 5 cut(s) 273, 608, 672, 678, 732
TspGWI ACGGA 2 cut(s) 230, 1431
TspRI CASTG 3 cut(s) 768, 988, 1053
Van91I CCANNNNNTGG 2 cut(s) 1048, 1568
VpaK11BI GGWCC 4 cut(s) 266, 608, 749, 1421
XapI RAATTY 2 cut(s) 679, 1338
XcmI CCANNNNNNNNNTGG 1 cut(s) 1874
XmiI GTMKAC 1 cut(s) 1477
XspI CTAG 6 cut(s) 668, 852, 1037, 1224, 1763, 1781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.